Anxa10 (annexin A10) - Rat Genome Database
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Gene: Anxa10 (annexin A10) Mus musculus
Analyze
Symbol: Anxa10
Name: annexin A10
RGD ID: 1318990
MGI Page MGI
Description: Predicted to have calcium ion binding activity. Localizes to mitochondrion. Orthologous to human ANXA10 (annexin A10); INTERACTS WITH (+)-dexrazoxane; doxorubicin; pirinixic acid.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: annexin-10; MGC159022
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39862,510,076 - 62,576,227 (-)NCBIGRCm39mm39
GRCm38862,057,042 - 62,123,193 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl862,057,042 - 62,123,150 (-)EnsemblGRCm38mm10GRCm38
MGSCv37864,536,318 - 64,601,915 (-)NCBIGRCm37mm9NCBIm37
MGSCv36864,949,657 - 65,015,235 (-)NCBImm8
Celera864,630,009 - 64,695,499 (-)NCBICelera
Cytogenetic Map8B3.1NCBI
cM Map831.55NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IBA)
mitochondrion  (HDA)

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

Additional References at PubMed
PMID:10349636   PMID:10458909   PMID:11042159   PMID:11076861   PMID:12477932   PMID:16141072   PMID:16141073   PMID:21873635   PMID:27507697   PMID:27881083  


Genomics

Comparative Map Data
Anxa10
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39862,510,076 - 62,576,227 (-)NCBIGRCm39mm39
GRCm38862,057,042 - 62,123,193 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl862,057,042 - 62,123,150 (-)EnsemblGRCm38mm10GRCm38
MGSCv37864,536,318 - 64,601,915 (-)NCBIGRCm37mm9NCBIm37
MGSCv36864,949,657 - 65,015,235 (-)NCBImm8
Celera864,630,009 - 64,695,499 (-)NCBICelera
Cytogenetic Map8B3.1NCBI
cM Map831.55NCBI
ANXA10
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl4168,092,537 - 168,187,736 (+)EnsemblGRCh38hg38GRCh38
GRCh384168,092,525 - 168,187,736 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh374169,013,688 - 169,108,893 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 364169,250,282 - 169,345,468 (+)NCBINCBI36hg18NCBI36
Build 344169,388,436 - 169,483,623NCBI
Celera4166,343,539 - 166,438,757 (+)NCBI
Cytogenetic Map4q32.3NCBI
HuRef4164,764,944 - 164,862,224 (+)NCBIHuRef
CHM1_14168,990,306 - 169,085,519 (+)NCBICHM1_1
Anxa10
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01629,674,699 - 29,741,521 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1629,674,793 - 29,741,465 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01629,552,396 - 29,604,476 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.01630,974,485 - 30,984,960 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41630,713,142 - 30,782,020 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1627,776,001 - 27,843,058 (+)NCBICelera
Cytogenetic Map16p12NCBI
Anxa10
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540337,780,044 - 37,845,808 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540337,780,428 - 37,821,212 (-)NCBIChiLan1.0ChiLan1.0
ANXA10
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.14172,375,910 - 172,472,033 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl4172,412,718 - 172,472,033 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v04160,297,246 - 160,394,825 (+)NCBIMhudiblu_PPA_v0panPan3
ANXA10
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl1563,540,054 - 63,635,656 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.11563,540,180 - 63,635,643 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Anxa10
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_004936516584,631 - 644,023 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ANXA10
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1421,249,343 - 21,314,914 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11421,249,020 - 21,315,260 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21422,576,754 - 22,642,697 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ANXA10
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1 Ensembl7114,388,038 - 114,449,277 (+)Ensembl
ChlSab1.17114,287,291 - 114,449,532 (+)NCBI
Anxa10
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046249321,268,193 - 1,335,246 (+)NCBI

Position Markers
AJ238978  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38862,057,659 - 62,057,741UniSTSGRCm38
MGSCv37864,536,456 - 64,536,538UniSTSGRCm37
Celera864,630,147 - 64,630,229UniSTS
Cytogenetic Map8B3.1UniSTS
Whitehead/MRC_RH8689.73UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1558870Eae36_mexperimental allergic encephalomyelitis susceptibility 36 (mouse)Not determined81472316071045600Mouse
1357811Orq3_movulation rate QTL 3 (mouse)Not determined83201654471287993Mouse
4141437W10q14_mweight 10 weeks QTL 14 (mouse)Not determined3201654471287993Mouse
4141172W6q9_mweight 6 weeks QTL 9 (mouse)Not determined3201654471287993Mouse
4140966Egq12_mearly growth QTL 12 (mouse)Not determined3201654471287993Mouse
4140967Bmd39_mbone mineral density 39 (mouse)Not determined832016544117238700Mouse
1301936Trigq2_mtriglyceride QTL 2 (mouse)Not determined83383736267837502Mouse
1558875Eae31_mexperimental allergic encephalomyelitis susceptibility 31 (mouse)Not determined834642776114837007Mouse
1301013Capsq4_mcapsaicin sensitivity related QTL 4 (mouse)Not determined83616300092728652Mouse
27226754Femd6_mfemur midshaft diameter 6, 10 week (mouse)837400000109600000Mouse
12904744Carcdq1_mcardiac collagen deposition QTL 1 (mouse)83970925694689598Mouse
1301544Iba3_minduction of brown adipocytes 3 (mouse)Not determined84429488078295025Mouse
1301717Adip4_madiposity 4 (mouse)Not determined84763703081637146Mouse
10766453Char11_mP. chabaudi malaria resistance QTL 11 (mouse)84763703081637146Mouse
1301441Skull11_mskull morphology 11 (mouse)Not determined84773713481737254Mouse
1357715Alaa3_malopecia areata 3 (mouse)Not determined84879293982793021Mouse
14746987Manh64_mmandible shape 64 (mouse)85005330684053306Mouse
14747005Mancz7_mmandible centroid size 7 (mouse)85005330684053306Mouse
14700686Civq3_mcerebral infarct volume QTL 3 (mouse)85188219185882191Mouse
1301506Aevm1_mautoimmune extremity vasculitis in MRL mice 1 (mouse)Not determined85428781788287993Mouse
1301952Im3_mimmunoregulatory 3 (mouse)Not determined85470661488706763Mouse
10412287Carg3_mCandida albicans resistance gene 3 (mouse)Not determined85554502889545028Mouse
11353828Gf7_mgonadal fat pad weight 7 (mouse)85820147992201479Mouse
10043975Obq31_mobesity QTL 31 (mouse)Not determined85840977692409776Mouse
1301688Orch6_mautoimmune orchitis resistance 6 (mouse)Not determined86078685094786976Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:254
Count of miRNA genes:140
Interacting mature miRNAs:156
Transcripts:ENSMUST00000034052, ENSMUST00000034054
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001136089 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_011922 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC144858 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC161263 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ238978 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK008772 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK008808 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK008930 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK018597 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK020288 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK131880 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168715 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AV078194 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC125319 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC132207 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY083459 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466569 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000034052   ⟹   ENSMUSP00000034052
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl862,057,042 - 62,123,116 (-)Ensembl
RefSeq Acc Id: ENSMUST00000034054   ⟹   ENSMUSP00000034054
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl862,057,525 - 62,123,118 (-)Ensembl
RefSeq Acc Id: ENSMUST00000210799
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl862,063,744 - 62,123,150 (-)Ensembl
RefSeq Acc Id: NM_001136089   ⟹   NP_001129561
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39862,510,076 - 62,576,227 (-)NCBI
GRCm38862,057,042 - 62,123,193 (-)NCBI
MGSCv37864,536,318 - 64,601,915 (-)RGD
Celera864,629,530 - 64,695,574 (-)NCBI
cM Map8 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_011922   ⟹   NP_036052
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39862,510,076 - 62,576,227 (-)NCBI
GRCm38862,057,042 - 62,123,193 (-)NCBI
MGSCv37864,536,318 - 64,601,915 (-)RGD
Celera864,629,530 - 64,695,574 (-)NCBI
cM Map8 ENTREZGENE
Sequence:
Reference Sequences
RefSeq Acc Id: NP_036052   ⟸   NM_011922
- Peptide Label: isoform 2
- UniProtKB: Q3V2F1 (UniProtKB/TrEMBL),   Q9D272 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001129561   ⟸   NM_001136089
- Peptide Label: isoform 1
- UniProtKB: Q9QZ10 (UniProtKB/Swiss-Prot),   Q3V2F1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000034052   ⟸   ENSMUST00000034052
RefSeq Acc Id: ENSMUSP00000034054   ⟸   ENSMUST00000034054

Promoters
RGD ID:8667161
Promoter ID:EPDNEW_M11612
Type:multiple initiation site
Name:Anxa10_1
Description:Mus musculus annexin A10 , transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38862,123,194 - 62,123,254EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1347090 AgrOrtholog
Ensembl Genes ENSMUSG00000031635 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000034052 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000034054 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000034052 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000034054 ENTREZGENE, UniProtKB/TrEMBL
Gene3D-CATH 1.10.220.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Annexin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Annexin_repeat UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Annexin_repeat_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Annexin_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ANX10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:26359 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1347090 ENTREZGENE
NCBI Gene 26359 ENTREZGENE
Pfam Annexin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Anxa10 PhenoGen
PRINTS ANNEXIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ANNEXINX UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE ANNEXIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ANNEXIN_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART ANX UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF47874 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniGene Mm.42179 ENTREZGENE
UniProt ANX10_MOUSE UniProtKB/Swiss-Prot
  Q3V2F1 ENTREZGENE, UniProtKB/TrEMBL
  Q9D272 ENTREZGENE, UniProtKB/TrEMBL
  Q9QZ10 ENTREZGENE
UniProt Secondary Q3TGJ1 UniProtKB/Swiss-Prot