Tmem192 (transmembrane protein 192)

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Gene: Tmem192 (transmembrane protein 192) Mus musculus

Analyze

Symbol:

Tmem192

Name:

transmembrane protein 192

RGD ID:

1319636

MGI Page

MGI

Description:

Predicted to have protein homodimerization activity. Predicted to localize to several cellular components, including late endosome; lysosomal membrane; and perinuclear region of cytoplasm. Orthologous to human TMEM192 (transmembrane protein 192); INTERACTS WITH 1,2-dimethylhydrazine; 2,3,7,8-tetrachlorodibenzodioxine; benzo[a]pyrene.

Type:

protein-coding

RefSeq Status:

VALIDATED

Also known as:

3110005G23Rik

RGD Orthologs

Human

Rat

Chinchilla

Bonobo

Dog

Squirrel

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	TMEM192 (transmembrane protein 192)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):	Tmem192 (transmembrane protein 192)	HGNC	Treefam, EggNOG, OrthoMCL, NCBI, OMA, HomoloGene, Inparanoid, Panther, OrthoDB, Ensembl
Chinchilla lanigera (long-tailed chinchilla):	Tmem192 (transmembrane protein 192)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	TMEM192 (transmembrane protein 192)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	TMEM192 (transmembrane protein 192)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Tmem192 (transmembrane protein 192)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	TMEM192 (transmembrane protein 192)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (African green monkey):	TMEM192 (transmembrane protein 192)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Tmem192 (transmembrane protein 192)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Tmem192 (transmembrane protein 192)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)
Homo sapiens (human):	TMEM192 (transmembrane protein 192)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|Roundup\|TreeFam)
Danio rerio (zebrafish):	tmem192 (transmembrane protein 192)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|Roundup\|TreeFam\|ZFIN)
Drosophila melanogaster (fruit fly):	CG7523	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|Roundup\|TreeFam)

Latest Assembly:

GRCm38 - Mouse Genome Assembly GRCm38

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	65,399,801 - 65,421,688 (+)	NCBI	GRCm39		mm39
GRCm38	8	64,947,149 - 64,969,036 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	64,947,185 - 64,969,033 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	67,471,084 - 67,492,935 (+)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	8	67,876,174 - 67,898,022 (+)	NCBI			mm8
Celera	8	67,509,201 - 67,530,946 (+)	NCBI		Celera
Cytogenetic Map	8	B3.1	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

2,5-hexanedione (ISO)

benzo[a]pyrene (EXP)

bisphenol A (ISO)

butanal (ISO)

cadmium dichloride (ISO)

choline (EXP)

cyclosporin A (ISO)

doxorubicin (ISO)

finasteride (ISO)

folic acid (EXP)

L-methionine (EXP)

paracetamol (ISO)

pentachlorophenol (EXP)

perfluorooctanoic acid (ISO)

pirinixic acid (EXP)

quercetin (ISO)

sulforaphane (ISO)

sunitinib (ISO)

titanium dioxide (EXP)

valproic acid (EXP)

vinclozolin (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

biological_process (ND)

Cellular Component

endoplasmic reticulum (ISO)

endosome (ISO)

Golgi apparatus (ISO)

integral component of membrane (IEA)

late endosome (IBA,ISO)

lysosomal membrane (IBA,ISO)

lysosome (ISO)

membrane (IEA)

nucleoplasm (ISO)

nucleus (ISO)

perinuclear region of cytoplasm (ISO)

plasma membrane (ISO)

Molecular Function

protein homodimerization activity (ISO)

References

References - curated


1.	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2.	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:8889548	PMID:10349636	PMID:10922068	PMID:11042159	PMID:11076861	PMID:11217851	PMID:12466851	PMID:12477932	PMID:14610273	PMID:15782199	PMID:16141072	PMID:16141073
PMID:18799693	PMID:21267068	PMID:21873635	PMID:28504966

Genomics

Comparative Map Data

Tmem192
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	65,399,801 - 65,421,688 (+)	NCBI	GRCm39		mm39
GRCm38	8	64,947,149 - 64,969,036 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	64,947,185 - 64,969,033 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	67,471,084 - 67,492,935 (+)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	8	67,876,174 - 67,898,022 (+)	NCBI			mm8
Celera	8	67,509,201 - 67,530,946 (+)	NCBI		Celera
Cytogenetic Map	8	B3.1	NCBI

TMEM192
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38.p13 Ensembl	4	165,070,608 - 165,208,549 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh38	4	165,070,608 - 165,112,913 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh37	4	165,997,230 - 166,034,024 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	4	166,216,680 - 166,253,474 (-)	NCBI	NCBI36		hg18	NCBI36
Celera	4	163,328,647 - 163,365,196 (-)	NCBI
Cytogenetic Map	4	q32.3	NCBI
HuRef	4	161,750,449 - 161,784,815 (-)	NCBI		HuRef
CHM1_1	4	165,973,696 - 166,010,477 (-)	NCBI		CHM1_1

Tmem192
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rnor_6.0	16	26,620,525 - 26,642,537 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	26,619,598 - 26,633,796 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	16	26,503,237 - 26,515,689 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	16	26,481,058 - 26,494,314 (-)	NCBI	RGSC3.4		rn4	RGSC3.4
RGSC_v3.1	16	26,481,056 - 26,494,312 (-)	NCBI
Celera	16	24,825,265 - 24,846,005 (-)	NCBI		Celera
Cytogenetic Map	16	p13	NCBI

Tmem192
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955403	40,199,850 - 40,212,765 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955403	40,202,180 - 40,211,747 (+)	NCBI	ChiLan1.0	ChiLan1.0

TMEM192
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	4	169,320,974 - 169,352,166 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	4	169,318,179 - 169,427,945 (-)	Ensembl	panpan1.1		panPan2
Mhudiblu_PPA_v0	4	157,269,816 - 157,304,743 (-)	NCBI	Mhudiblu_PPA_v0		panPan3

TMEM192
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1 Ensembl	15	61,090,399 - 61,110,762 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
CanFam3.1	15	61,088,944 - 61,110,426 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1

Tmem192
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
SpeTri2.0	NW_004936555	855,096 - 891,525 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TMEM192
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	8	43,960,724 - 43,990,093 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	8	43,960,670 - 43,994,286 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	8	45,924,110 - 45,944,995 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TMEM192
(Chlorocebus sabaeus - African green monkey)

Vervet Assembly	Chr	Position (strand)	Source	Genome Browsers
Vervet Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	7	111,440,985 - 111,472,196 (-)	NCBI
ChlSab1.1 Ensembl	7	111,443,197 - 111,472,123 (-)	Ensembl

Tmem192
(Heterocephalus glaber - naked mole-rat)

Molerat Assembly	Chr	Position (strand)	Source	Genome Browsers
Molerat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624758	11,887,968 - 11,900,581 (+)	NCBI

QTLs in Region (GRCm38)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1558870	Eae36_m	experimental allergic encephalomyelitis susceptibility 36 (mouse)			Not determined		8	14723160	71045600	Mouse
1357811	Orq3_m	ovulation rate QTL 3 (mouse)			Not determined		8	32016544	71287993	Mouse
4141437	W10q14_m	weight 10 weeks QTL 14 (mouse)			Not determined			32016544	71287993	Mouse
4141172	W6q9_m	weight 6 weeks QTL 9 (mouse)			Not determined			32016544	71287993	Mouse
4140966	Egq12_m	early growth QTL 12 (mouse)			Not determined			32016544	71287993	Mouse
4140967	Bmd39_m	bone mineral density 39 (mouse)			Not determined		8	32016544	117238700	Mouse
1301936	Trigq2_m	triglyceride QTL 2 (mouse)			Not determined		8	33837362	67837502	Mouse
1558875	Eae31_m	experimental allergic encephalomyelitis susceptibility 31 (mouse)			Not determined		8	34642776	114837007	Mouse
1301013	Capsq4_m	capsaicin sensitivity related QTL 4 (mouse)			Not determined		8	36163000	92728652	Mouse
27226754	Femd6_m	femur midshaft diameter 6, 10 week (mouse)					8	37400000	109600000	Mouse
12904744	Carcdq1_m	cardiac collagen deposition QTL 1 (mouse)					8	39709256	94689598	Mouse
1301544	Iba3_m	induction of brown adipocytes 3 (mouse)			Not determined		8	44294880	78295025	Mouse
1301717	Adip4_m	adiposity 4 (mouse)			Not determined		8	47637030	81637146	Mouse
10766453	Char11_m	P. chabaudi malaria resistance QTL 11 (mouse)					8	47637030	81637146	Mouse
1301441	Skull11_m	skull morphology 11 (mouse)			Not determined		8	47737134	81737254	Mouse
1357715	Alaa3_m	alopecia areata 3 (mouse)			Not determined		8	48792939	82793021	Mouse
14746987	Manh64_m	mandible shape 64 (mouse)					8	50053306	84053306	Mouse
14747005	Mancz7_m	mandible centroid size 7 (mouse)					8	50053306	84053306	Mouse
14700686	Civq3_m	cerebral infarct volume QTL 3 (mouse)					8	51882191	85882191	Mouse
1301506	Aevm1_m	autoimmune extremity vasculitis in MRL mice 1 (mouse)			Not determined		8	54287817	88287993	Mouse
1301952	Im3_m	immunoregulatory 3 (mouse)			Not determined		8	54706614	88706763	Mouse
10412287	Carg3_m	Candida albicans resistance gene 3 (mouse)			Not determined		8	55545028	89545028	Mouse
11353828	Gf7_m	gonadal fat pad weight 7 (mouse)					8	58201479	92201479	Mouse
10043975	Obq31_m	obesity QTL 31 (mouse)			Not determined		8	58409776	92409776	Mouse
1301688	Orch6_m	autoimmune orchitis resistance 6 (mouse)			Not determined		8	60786850	94786976	Mouse
4141285	Tgq18_m	triglyceride QTL 18 (mouse)			Not determined			63460107	97460107	Mouse
4141797	Skmw16_m	skeletal muscle weight 16 (mouse)			Not determined		8	63939547	97939696	Mouse

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	340
Count of miRNA genes:	162
Interacting mature miRNAs:	167
Transcripts:	ENSMUST00000026595, ENSMUST00000079896
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001163747	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_028427	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001778479	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC099723	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AI849438	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK013998	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK046181	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK132619	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK168146	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK178954	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK197518	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK207738	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK212072	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK212312	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK215398	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC020157	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466569	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSMUST00000026595 ⟹ ENSMUSP00000026595

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	8	64,947,185 - 64,969,033 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000079896 ⟹ ENSMUSP00000078819

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	8	64,947,254 - 64,969,031 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000209852 ⟹ ENSMUSP00000147788

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	8	64,947,219 - 64,966,720 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000209923 ⟹ ENSMUSP00000148175

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	8	64,947,232 - 64,968,903 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000211405 ⟹ ENSMUSP00000147585

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	8	64,959,543 - 64,965,591 (+)	Ensembl

RefSeq Acc Id:

NM_001163747 ⟹ NP_001157219

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	8	65,399,837 - 65,421,688 (+)	NCBI
GRCm38	8	64,947,185 - 64,969,036 (+)	NCBI
MGSCv37	8	67,471,084 - 67,492,935 (+)	RGD
Celera	8	67,509,201 - 67,530,946 (+)	RGD
cM Map	8		ENTREZGENE

Sequence:

show sequence

AGAGTGGGTGTGTCCGAGGCGGGGCGCGCAGGTCCTAGTAGGTGCGACTGTCCCGGGCCGTCGG
CGCCCGGGCGCTGGTGGAGAGGTCAGGCTGGCGGGGCATCGGCCCGCGACGGCGGGTCATGGCG
GCGGCCGGCCGGCTGGAGGACAGTTCCTTGGATATCCTACAAAGTATGGATGACGACCCGCTTC
TGGATACCCAGCCTCTCCCACACCACTCTCTCCAAGCTCAGTTTAGACCCAGATTCCATCCTCT
CCCCACGGTCATCATAGCGAACCTTCTGTTGCTTATACATGTCGTGTTTGTTGTTTTAGCATTT
TTAACGGGTGTGCCGTGTTTGTATCCTAATCCAACTGAAGACAAGTGCCCAGAAAACTACACCA
GCCCGTTGAAGGTTCAGACGGCCATAATCCTTGGGAAACTTATCCTGTGGATTCTGCATTTGCT
TTTTGAACGCTACGTCCAGTATCACCACAGGAAAGTCAGGAGCCGAGGCTATTCCCAGATCTAC
CGCTCTACGAGGCATCTCAAAACACTGGCCCTCACCATCCACTCTTCTGTGAAGATTAGGAGGT
TCAACAGAGCCAAGCCACTGCCTGATGTACTTGAAGAAGAGAAAATTTATGCTTACCCCAGCAA
TACTGCCTCAGAGACTGGCTTCAGGACTGTTTCAAGCCTAGAAGAAATTGTTGAAAAGCAAGAG
GACATAATTGTGTACCTGAAGCGACACAATGCTCTGCTGAGTAAGCGGTTGTTGGAGCTGGCAA
CTCAGCCAGCCAGGACTTGAGAGGCTCGTGGGCATGAGAGCCGCTGAGTCCACAGTGACTGCAG
ACTGCCCGGCTGCCACAGGAAACCCCAGCCTTTGCCGACGTCGCGTCCACAGTGCATGCTGGGA
ACCTGAATCCAGTTCTACCTATGTAGAGCTATGTATGTCCCAGATATGGGGGCGAGCCTCTGAG
TGGATTATAAAGGTCTGGAAAACTTGCGAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

NM_028427 ⟹ NP_082703

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	8	65,399,837 - 65,421,688 (+)	NCBI
GRCm38	8	64,947,185 - 64,969,036 (+)	NCBI
MGSCv37	8	67,471,084 - 67,492,935 (+)	RGD
Celera	8	67,509,201 - 67,530,946 (+)	RGD
cM Map	8		ENTREZGENE

Sequence:

show sequence

AGAGTGGGTGTGTCCGAGGCGGGGCGCGCAGGTCCTAGTAGGTGCGACTGTCCCGGGCCGTCGG
CGCCCGGGCGCTGGTGGAGAGGTCAGGCTGGCGGGGCATCGGCCCGCGACGGCGGGTCATGGCG
GCGGCCGGCCGGCTGGAGGACAGTTCCTTGGATATCCTACAAAGTATGGATGACGACCCGCTTC
TGGATACCCAGCCTCTCCCACACCACTCTCTCCAAGCTCAGTTTAGACCCAGATTCCATCCTCT
CCCCACGGTCATCATAGCGAACCTTCTGTTGCTTATACATGTCGTGTTTGTTGTTTTAGCATTT
TTAACGGGTGTGCCGTGTTTGTATCCTAATCCAACTGAAGACAAGTGCCCAGAAAACTACACCA
GCCCGTTGAAGGTTCAGACGGCCATAATCCTTGGGAAACTTATCCTGTGGATTCTGCATTTGCT
TTTTGAACGCTACGTCCAGTATCACCACAGGAAAGTCAGGAGCCGAGGCTATTCCCAGATCTAC
CGCTCTACGAGGCATCTCAAAACACTGGCCCTCACCATCCACTCTTCTGGCAACACAGCCCTGC
TCCTCCTCCTCTGTGTGCAGCACTCCTTCCCTGAGCCCAGCAAGCTGTACCTTGAGCTGATTCT
GGCTGTCCTGGCCCTGGAGCTGATCTGTTCCCTGAGCTGTCTGATCCTCTATATAGTGAAGATT
AGGAGGTTCAACAGAGCCAAGCCACTGCCTGATGTACTTGAAGAAGAGAAAATTTATGCTTACC
CCAGCAATACTGCCTCAGAGACTGGCTTCAGGACTGTTTCAAGCCTAGAAGAAATTGTTGAAAA
GCAAGAGGACATAATTGTGTACCTGAAGCGACACAATGCTCTGCTGAGTAAGCGGTTGTTGGAG
CTGGCAACTCAGCCAGCCAGGACTTGAGAGGCTCGTGGGCATGAGAGCCGCTGAGTCCACAGTG
ACTGCAGACTGCCCGGCTGCCACAGGAAACCCCAGCCTTTGCCGACGTCGCGTCCACAGTGCAT
GCTGGGAACCTGAATCCAGTTCTACCTATGTAGAGCTATGTATGTCCCAGATATGGGGGCGAGC
CTCTGAGTGGATTATAAAGGTCTGGAAAACTTGCGAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XR_001778479

RefSeq Status:

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	8	65,399,801 - 65,421,688 (+)	NCBI
GRCm38	8	64,947,149 - 64,969,036 (+)	NCBI

Sequence:

show sequence

GGGCGTGGCCTTCGGCGGCCGGGGCGGGGCGAGCGCAGAGTGGGTGTGTCCGAGGCGGGGCGCG
CAGGTCCTAGTAGGTGCGACTGTCCCGGGCCGTCGGCGCCCGGGCGCTGGTGGAGAGGTCAGGC
TGGCGGGGCATCGGCCCGCGACGGCGGGTCATGGCGGCGGCCGGCCGGCTGGAGGACAGTTCCT
TGGATATCCTACAAAGTATGGATGACGACCCGCTTCTGGATACCCAGCCTCTCCCACACCACTC
TCTCCAAGCTCAGTTTAGACCCAGATTCCATCCTCTCCCCACGGTCATCATAGCGAACCTTCTG
TTGCTTATACATGTCGTGTTTGTTGTTTTAGCATTTTTAACGGGTGTGCCGTGTTTGTATCCTA
ATCCAACTGAAGACAAGTGCCCAGAAAACTACACCAGCCCGTTGAAGGTTCAGACGGCCATAAT
CCTTGGGAAACTTATCCTGTGGATTCTGCATTTGCTTTTTGAACGCTACGTCCAGTATCACCAC
AGGAAAGTCAGGAGCCGAGGCTATTCCCAGATCTACCGCTCTACGAGGCATCTCAAAACACTGG
CCCTCACCATCCACTCTTCTGGCAACACAGCCCTGCTCCTCCTCCTCTGTGTGCAGCACTCCTT
CCCTGAGCCCAGCAAGCTGTACCTTGAGCTGATTCTGGCTGTCCTGGCCCTGGAGCTGATCTGT
TCCCTGAGCTGTCTGATCCTCTATATAGGTGAGAACGGAAGCCGCTGTCCTGCAACCTCTGCCT
GCCTCCTCTGCCTGCCTCTCGTCTGTACAGTCAGAGAAGCACAGCCTGTTTTGGCGGACGTCTT
CCCCCTTAGCCGAGGACTCCTTTAGCACCCCTGTCATTTACTTATGACCACTTCTGGTCACCTC
TCCTTCCAGACCAACAGGATGAGACAGCCACTACCATGAAGATTAGGAGGTTCAACAGAGCCAA
GCCACTGCCTGATGTACTTGAAGAAGAGAAAATTTATGCTTACCCCAGCAATACTGCCTCAGAG
ACTGGCTTCAGGACTGTTTCAAGCCTAGAAGAAATTGTTGAAAAGCAAGAGGACATAATTGTGT
ACCTGAAGCGACACAATGCTCTGCTGAGTAAGCGGTTGTTGGAGCTGGCAACTCAGCCAGCCAG
GACTTGAGAGGCTCGTGGGCATGAGAGCCGCTGAGTCCACAGTGACTGCAGACTGCCCGGCTGC
CACAGGAAACCCCAGCCTTTGCCGACGTCGCGTCCACAGTGCATGCTGGGAACCTGAATCCAGT
TCTACCTATGTAGAGCTATGTATGTCCCAGATATGGGGGCGAGCCTCTGAGTGGATTATAAAGG
TCTGGAAAACTTGCGAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001157219	(Get FASTA)	NCBI Sequence Viewer
	NP_082703	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH20157	(Get FASTA)	NCBI Sequence Viewer
	BAB29107	(Get FASTA)	NCBI Sequence Viewer
	BAC32622	(Get FASTA)	NCBI Sequence Viewer
	BAE21265	(Get FASTA)	NCBI Sequence Viewer
	BAE40111	(Get FASTA)	NCBI Sequence Viewer
	EDL28680	(Get FASTA)	NCBI Sequence Viewer
	EDL28681	(Get FASTA)	NCBI Sequence Viewer
	EDL28682	(Get FASTA)	NCBI Sequence Viewer
	EDL28683	(Get FASTA)	NCBI Sequence Viewer
	Q9CXT7	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:	NP_082703 ⟸ NM_028427
- Peptide Label:	isoform 1
- UniProtKB:	Q9CXT7 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MAAAGRLEDSSLDILQSMDDDPLLDTQPLPHHSLQAQFRPRFHPLPTVIIANLLLLIHVVFVVL AFLTGVPCLYPNPTEDKCPENYTSPLKVQTAIILGKLILWILHLLFERYVQYHHRKVRSRGYSQ IYRSTRHLKTLALTIHSSGNTALLLLLCVQHSFPEPSKLYLELILAVLALELICSLSCLILYIV KIRRFNRAKPLPDVLEEEKIYAYPSNTASETGFRTVSSLEEIVEKQEDIIVYLKRHNALLSKRL LELATQPART hide sequence

RefSeq Acc Id:	NP_001157219 ⟸ NM_001163747
- Peptide Label:	isoform 2
- UniProtKB:	Q9CXT7 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MAAAGRLEDSSLDILQSMDDDPLLDTQPLPHHSLQAQFRPRFHPLPTVIIANLLLLIHVVFVVL AFLTGVPCLYPNPTEDKCPENYTSPLKVQTAIILGKLILWILHLLFERYVQYHHRKVRSRGYSQ IYRSTRHLKTLALTIHSSVKIRRFNRAKPLPDVLEEEKIYAYPSNTASETGFRTVSSLEEIVEK QEDIIVYLKRHNALLSKRLLELATQPART hide sequence

RefSeq Acc Id:

ENSMUSP00000078819 ⟸ ENSMUST00000079896

RefSeq Acc Id:

ENSMUSP00000026595 ⟸ ENSMUST00000026595

RefSeq Acc Id:

ENSMUSP00000147585 ⟸ ENSMUST00000211405

RefSeq Acc Id:

ENSMUSP00000147788 ⟸ ENSMUST00000209852

RefSeq Acc Id:

ENSMUSP00000148175 ⟸ ENSMUST00000209923

Promoters

RGD ID:

8667173

Promoter ID:

EPDNEW_M11618

Type:

initiation region

Name:

Tmem192_1

Description:

Mus musculus transmembrane protein 192 , transcript variant 2,mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	8	64,947,221 - 64,947,281	EPDNEW

RGD ID:

6843823

Promoter ID:

MM_KWN:54538

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

3T3L1_Day0, 3T3L1_Day1, 3T3L1_Day3, 3T3L1_Day4, 3T3L1_Day6, BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, ES_Cell, Kidney, Liver, Lung, MEF_B4, MEF_B6, Spleen

Transcripts:

NM_001163747, NM_028427

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	8	67,471,054 - 67,471,554 (+)	MPROMDB

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:1920317	AgrOrtholog
Ensembl Genes	ENSMUSG00000025521	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein	ENSMUSP00000026595	ENTREZGENE, UniProtKB/Swiss-Prot
	ENSMUSP00000078819	ENTREZGENE, UniProtKB/Swiss-Prot
	ENSMUSP00000147585	UniProtKB/TrEMBL
	ENSMUSP00000147788	UniProtKB/TrEMBL
	ENSMUSP00000148175	UniProtKB/TrEMBL
Ensembl Transcript	ENSMUST00000026595	ENTREZGENE, UniProtKB/Swiss-Prot
	ENSMUST00000079896	ENTREZGENE, UniProtKB/Swiss-Prot
	ENSMUST00000209852	UniProtKB/TrEMBL
	ENSMUST00000209923	UniProtKB/TrEMBL
	ENSMUST00000211405	UniProtKB/TrEMBL
InterPro	TMEM192	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	mmu:73067	UniProtKB/Swiss-Prot
MGD	MGI:1920317	ENTREZGENE
NCBI Gene	73067	ENTREZGENE
PANTHER	PTHR31592	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	TMEM192	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Tmem192	PhenoGen
UniGene	Mm.294445	ENTREZGENE
UniProt	A0A1B0GRM5_MOUSE	UniProtKB/TrEMBL
	A0A1B0GS44_MOUSE	UniProtKB/TrEMBL
	A0A1B0GT30_MOUSE	UniProtKB/TrEMBL
	Q3V186_MOUSE	UniProtKB/TrEMBL
	Q9CXT7	ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary	Q3THT5	UniProtKB/Swiss-Prot
	Q8VDU8	UniProtKB/Swiss-Prot

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)