| Gene: Usp38 (ubiquitin specific peptidase 38) Mus musculus |
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Analyze |
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| Symbol: |
Usp38 |
| Name: |
ubiquitin specific peptidase 38 |
| Description: |
null |
| Type: |
protein-coding
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| RefSeq Status: |
PROVISIONAL |
| Also known as: |
4631402N15Rik; 4833420O05Rik; AA536967; AU044701; AW544820; deubiquitinating enzyme 38; mKIAA1891; ubiquitin carboxyl-terminal hydrolase 38; ubiquitin specific protease 38; ubiquitin thioesterase 38; ubiquitin thiolesterase 38; ubiquitin-specific-processing protease 38 |
| Orthologs: |
| Species |
Gene symbol and name |
Data Source |
Assertion derived from |
less info ...
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| Orthologs 1 |
| Homo sapiens (human): |
USP38 (ubiquitin specific peptidase 38) |
HGNC |
EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam |
| Rattus norvegicus (Norway rat): |
Usp38 (ubiquitin specific peptidase 38) |
HGNC |
Treefam, EggNOG, OrthoMCL, NCBI, OMA, HomoloGene, Inparanoid, Panther, OrthoDB, Ensembl |
| Chinchilla lanigera (long-tailed chinchilla): |
Usp38 (ubiquitin specific peptidase 38) |
Transitive Ortholog Pipeline |
Transitive Ortholog Pipeline |
| Pan paniscus (bonobo/pygmy chimpanzee): |
USP38 (ubiquitin specific peptidase 38) |
Transitive Ortholog Pipeline |
Transitive Ortholog Pipeline |
| Canis lupus familiaris (dog): |
USP38 (ubiquitin specific peptidase 38) |
Transitive Ortholog Pipeline |
Transitive Ortholog Pipeline |
| Ictidomys tridecemlineatus (thirteen-lined ground squirrel): |
Usp38 (ubiquitin specific peptidase 38) |
Transitive Ortholog Pipeline |
Transitive Ortholog Pipeline |
| Sus scrofa (pig): |
USP38 (ubiquitin specific peptidase 38) |
Transitive Ortholog Pipeline |
Transitive Ortholog Pipeline |
| Alliance orthologs 3 |
| Rattus norvegicus (Norway rat): |
Usp38 (ubiquitin specific peptidase 38)
|
Alliance |
DIOPT (Ensembl Compara, InParanoid, OMA, OrthoFinder, OrthoInspector, PANTHER, TreeFam) |
| Homo sapiens (human): |
USP38 (ubiquitin specific peptidase 38)
|
Alliance |
DIOPT (Ensembl Compara, HGNC, Hieranoid, InParanoid, OMA, OrthoFinder, OrthoInspector, PANTHER, PhylomeDB, Roundup, TreeFam) |
| Danio rerio (zebrafish): |
usp38 (ubiquitin specific peptidase 38)
|
Alliance |
DIOPT (Ensembl Compara, Hieranoid, InParanoid, OMA, OrthoFinder, OrthoInspector, PANTHER, PhylomeDB, Roundup, TreeFam) |
| Drosophila melanogaster (fruit fly): |
DUBAI
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Alliance |
DIOPT (Ensembl Compara, Hieranoid, InParanoid, OMA, OrthoInspector, PANTHER, PhylomeDB, Roundup, TreeFam) |
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| Related Pseudogenes: |
Gm18601
|
| Latest Assembly: |
GRCm38 - Mouse Genome Assembly GRCm38 |
| Position: |
| Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCm38 | 8 | 80,980,724 - 81,015,031 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | MGSCv37 | 8 | 83,504,632 - 83,538,805 (-) | NCBI | GRCm37 | | mm9 | NCBIm37 | MGSCv36 | 8 | 83,876,479 - 83,910,652 (-) | NCBI | | | mm8 | | Celera | 8 | 75,127,726 - 75,134,583 (+) | NCBI | | Celera | | | Celera | 8 | 85,259,181 - 85,286,557 (-) | NCBI | | Celera | | | Cytogenetic Map | 8 | C2 | NCBI | | | | | cM Map | 8 | 38.68 | NCBI | | | | |
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| JBrowse: |
View Region in Genome Browser (JBrowse)
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| Model |
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 Gene-Chemical Interaction Annotations
| (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE | multiple interactions | ISO | RGD:1311974 | 6480464 | [oxaliplatin co-treated with Topotecan] results in decreased expression of USP38 mRNA | CTD | PMID:25729387 | | 1,2-dichloroethane | decreases expression | EXP | | 6480464 | ethylene dichloride results in decreased expression of USP38 mRNA | CTD | PMID:28189721 | | 2,6-dinitrotoluene | affects expression | ISO | RGD:1311974 | 6480464 | 2, 6-dinitrotoluene affects the expression of USP38 mRNA | CTD | PMID:21346803 | | 3,4-methylenedioxymethamphetamine | increases expression | EXP | | 6480464 | N-Methyl-3, 4-methylenedioxyamphetamine results in increased expression of USP38 mRNA | CTD | PMID:20188158 | | atrazine | decreases expression | ISO | RGD:1323709 | 6480464 | Atrazine results in decreased expression of USP38 mRNA | CTD | PMID:22378314 | | benzo[a]pyrene | increases mutagenesis | ISO | RGD:1323709 | 6480464 | Benzo(a)pyrene results in increased mutagenesis of USP38 gene | CTD | PMID:25435355 | | benzo[a]pyrene diol epoxide I | decreases expression | ISO | RGD:1323709 | 6480464 | 7 more ... | CTD | PMID:20018196 | | bis(2-ethylhexyl) phthalate | increases expression | EXP | | 6480464 | Diethylhexyl Phthalate results in increased expression of USP38 mRNA | CTD | PMID:21318169 | | bisphenol A | increases expression | EXP | | 6480464 | bisphenol A results in increased expression of USP38 mRNA | CTD | PMID:26063408 | | cadmium dichloride | increases expression | EXP | | 6480464 | Cadmium Chloride results in increased expression of USP38 mRNA | CTD | PMID:20061341 | | choline | multiple interactions | EXP | | 6480464 | [Methionine deficiency co-treated with Choline deficiency co-treated with Folic Acid deficiency] results in decreased methylation of USP38 gene | CTD | PMID:20938992 | | ciguatoxin CTX1B | affects expression | EXP | | 6480464 | Ciguatoxins affects the expression of USP38 mRNA | CTD | PMID:18353800 | | cobalt dichloride | increases expression | ISO | RGD:1323709 | 6480464 | cobaltous chloride results in increased expression of USP38 mRNA | CTD | PMID:19320972 | | copper(II) sulfate | increases expression | ISO | RGD:1323709 | 6480464 | Copper Sulfate results in increased expression of USP38 mRNA | CTD | PMID:19549813 | | fenofibrate | increases expression | EXP | | 6480464 | Fenofibrate results in increased expression of USP38 mRNA | CTD | PMID:21318169 | | fenofibrate | multiple interactions | EXP | | 6480464 | PPARA protein affects the reaction [Fenofibrate results in increased expression of USP38 mRNA] | CTD | PMID:21318169 | | folic acid | multiple interactions | EXP | | 6480464 | [Methionine deficiency co-treated with Choline deficiency co-treated with Folic Acid deficiency] results in decreased methylation of USP38 gene | CTD | PMID:20938992 | | formaldehyde | decreases expression | ISO | RGD:1323709 | 6480464 | Formaldehyde results in decreased expression of USP38 mRNA | CTD | PMID:20655997 | | L-methionine | multiple interactions | EXP | | 6480464 | [Methionine deficiency co-treated with Choline deficiency co-treated with Folic Acid deficiency] results in decreased methylation of USP38 gene | CTD | PMID:20938992 | | leflunomide | increases expression | ISO | RGD:1323709 | 6480464 | leflunomide results in increased expression of USP38 mRNA | CTD | PMID:28988120 | | methylmercury chloride | increases expression | EXP | | 6480464 | methylmercuric chloride results in increased expression of USP38 mRNA | CTD | PMID:20061341 | | methylmercury chloride | decreases expression | ISO | RGD:1323709 | 6480464 | methylmercuric chloride results in decreased expression of USP38 mRNA | CTD | PMID:28001369 | | oxaliplatin | multiple interactions | ISO | RGD:1311974 | 6480464 | [oxaliplatin co-treated with Topotecan] results in decreased expression of USP38 mRNA | CTD | PMID:25729387 | | perfluorooctane-1-sulfonic acid | decreases expression | ISO | RGD:1323709 | 6480464 | perfluorooctane sulfonic acid results in decreased expression of USP38 mRNA | CTD | PMID:27153767 | | pirinixic acid | increases expression | EXP | | 6480464 | pirinixic acid results in increased expression of USP38 mRNA | CTD | PMID:18301758, PMID:21318169 | | pirinixic acid | multiple interactions | EXP | | 6480464 | PPARA protein affects the reaction [pirinixic acid results in increased expression of USP38 mRNA] | CTD | PMID:21318169 | | silver atom | decreases expression | EXP | | 6480464 | Silver results in decreased expression of USP38 mRNA | CTD | PMID:27131904 | | silver(0) | decreases expression | EXP | | 6480464 | Silver results in decreased expression of USP38 mRNA | CTD | PMID:27131904 | | silver(1+) | decreases expression | EXP | | 6480464 | Silver results in decreased expression of USP38 mRNA | CTD | PMID:27131904 | | sodium arsenite | affects methylation | ISO | RGD:1323709 | 6480464 | sodium arsenite affects the methylation of USP38 gene | CTD | PMID:28589171 | | Soman | increases expression | ISO | RGD:1311974 | 6480464 | Soman results in increased expression of USP38 mRNA | CTD | PMID:19281266 | | tetrachloromethane | decreases expression | ISO | RGD:1311974 | 6480464 | Carbon Tetrachloride results in decreased expression of USP38 mRNA | CTD | PMID:30723492 | | topotecan | multiple interactions | ISO | RGD:1311974 | 6480464 | [oxaliplatin co-treated with Topotecan] results in decreased expression of USP38 mRNA | CTD | PMID:25729387 | | trimellitic anhydride | increases expression | EXP | | 6480464 | trimellitic anhydride results in increased expression of USP38 mRNA | CTD | PMID:19042947 | | urethane | increases expression | ISO | RGD:1323709 | 6480464 | Urethane results in increased expression of USP38 mRNA | CTD | PMID:28818685 | | valproic acid | increases expression | ISO | RGD:1323709 | 6480464 | Valproic Acid results in increased expression of USP38 mRNA | CTD | PMID:29154799 | | valproic acid | decreases methylation | ISO | RGD:1323709 | 6480464 | Valproic Acid results in decreased methylation of USP38 gene | CTD | PMID:29154799 | |
Gene Ontology Annotations |
