Tmem38a (transmembrane protein 38A)

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Gene: Tmem38a (transmembrane protein 38A) Mus musculus

Analyze

Symbol:

Tmem38a

Name:

transmembrane protein 38A

RGD ID:

1550335

MGI Page

MGI

Description:

Exhibits identical protein binding activity and potassium channel activity. Involved in several processes, including cellular response to caffeine; potassium ion transmembrane transport; and regulation of sequestering of calcium ion. Localizes to nuclear membrane and sarcoplasmic reticulum. Is expressed in head mesenchyme; tongue; and vertebral axis musculature. Orthologous to human TMEM38A (transmembrane protein 38A); INTERACTS WITH 17alpha-ethynylestradiol; 17beta-estradiol; 2,2',4,4',5,5'-hexachlorobiphenyl.

Type:

protein-coding

RefSeq Status:

VALIDATED

Also known as:

1110001E17Rik; 27 kDa sarcoplasmic reticulum protein; AI413399; mg33a; mitsugumin-33A; Mitsugumin33A; sarcoplasmic reticulum protein 27; SPR-27; TRI; TRIC-A; TRICA; trimeric intracellular cation channel type A

RGD Orthologs

Human

Rat

Chinchilla

Bonobo

Dog

Squirrel

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	TMEM38A (transmembrane protein 38A)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):	Tmem38a (transmembrane protein 38a)	HGNC	Treefam, EggNOG, NCBI, OMA, HomoloGene, Inparanoid, Panther, OrthoDB, Ensembl
Chinchilla lanigera (long-tailed chinchilla):	Tmem38a (transmembrane protein 38A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	TMEM38A (transmembrane protein 38A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	TMEM38A (transmembrane protein 38A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Tmem38a (transmembrane protein 38A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	TMEM38A (transmembrane protein 38A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (African green monkey):	LOC103234112 (trimeric intracellular cation channel type A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Tmem38a (transmembrane protein 38A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Tmem38a (transmembrane protein 38a)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|TreeFam)
Homo sapiens (human):	TMEM38A (transmembrane protein 38A)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|Roundup\|TreeFam)
Danio rerio (zebrafish):	tmem38a (transmembrane protein 38A)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|Roundup\|TreeFam)
Drosophila melanogaster (fruit fly):	CG33061	Alliance	DIOPT (PANTHER\|PhylomeDB\|TreeFam)
Caenorhabditis elegans (roundworm):	tric-1B.1	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|Roundup\|TreeFam)
Drosophila melanogaster (fruit fly):	CG4239	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|Roundup\|TreeFam)
Caenorhabditis elegans (roundworm):	tric-1B.2	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|Roundup\|TreeFam)

Latest Assembly:

GRCm38 - Mouse Genome Assembly GRCm38

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	73,325,033 - 73,341,128 (+)	NCBI	GRCm39		mm39
GRCm38	8	72,571,189 - 72,587,284 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	72,572,055 - 72,587,282 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	75,096,002 - 75,111,183 (+)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	8	75,501,092 - 75,516,273 (+)	NCBI			mm8
Celera	8	76,918,441 - 76,933,607 (+)	NCBI		Celera
Cytogenetic Map	8	B3.3	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

COVID-19 (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

17alpha-ethynylestradiol (EXP)

17beta-estradiol (EXP,ISO)

2,2',4,4',5,5'-hexachlorobiphenyl (EXP)

2,2',5,5'-tetrachlorobiphenyl (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2-hydroxypropanoic acid (ISO)

3,4-methylenedioxymethamphetamine (EXP)

3-isobutyl-1-methyl-7H-xanthine (ISO)

benzo[a]pyrene (EXP)

bisphenol A (ISO)

butanal (ISO)

cadmium dichloride (ISO)

carbon nanotube (EXP)

clothianidin (ISO)

dexamethasone (ISO)

diazinon (ISO)

dibutyl phthalate (ISO)

ethanol (EXP)

formaldehyde (ISO)

indometacin (ISO)

lead(0) (ISO)

lead(2+) (ISO)

methyl methanesulfonate (ISO)

PCB138 (EXP)

pentanal (ISO)

propanal (ISO)

rac-lactic acid (ISO)

silicon dioxide (ISO)

silver atom (EXP)

silver(0) (EXP)

Soman (ISO)

titanium dioxide (EXP)

triclosan (ISO)

trimellitic anhydride (EXP)

valproic acid (EXP)

vinclozolin (ISO)

vincristine (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cellular response to caffeine (IGI)

endoplasmic reticulum organization (IGI)

inorganic cation transmembrane transport (IDA)

ion transport (IEA)

potassium ion transmembrane transport (IDA)

potassium ion transport (IEA)

regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion (IGI)

release of sequestered calcium ion into cytosol by sarcoplasmic reticulum (IGI)

Cellular Component

integral component of membrane (IEA)

membrane (IEA)

nuclear membrane (IDA)

nucleus (IEA)

sarcoplasmic reticulum (IDA)

Molecular Function

calcium-activated potassium channel activity (TAS)

cation channel activity (IEA)

identical protein binding (IPI)

potassium channel activity (IDA)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

abnormal fetal cardiomyocyte morphology (IAGP)

abnormal heartbeat (IAGP)

abnormal muscle physiology (IAGP)

abnormal myocardial fiber physiology (IAGP)

decreased myocardial fiber number (IAGP)

embryonic lethality during organogenesis, complete penetrance (IAGP)

References

References - curated


1.	Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2.	Kuninger D, etal., Genomics 2004 Nov;84(5):876-89.
3.	MGD data from the GO Consortium
4.	Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5.	RGD automated import pipeline
6.	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7.	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:8889548	PMID:10349636	PMID:11042159	PMID:11076861	PMID:12477932	PMID:14610273	PMID:15489334	PMID:15782199	PMID:16141072	PMID:16141073	PMID:17611541	PMID:18035970
PMID:19095005	PMID:20858894	PMID:21267068	PMID:21803293	PMID:23592776	PMID:24526676	PMID:27264872	PMID:30907436	PMID:31805819

Genomics

Comparative Map Data

Tmem38a
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	73,325,033 - 73,341,128 (+)	NCBI	GRCm39		mm39
GRCm38	8	72,571,189 - 72,587,284 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	72,572,055 - 72,587,282 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	75,096,002 - 75,111,183 (+)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	8	75,501,092 - 75,516,273 (+)	NCBI			mm8
Celera	8	76,918,441 - 76,933,607 (+)	NCBI		Celera
Cytogenetic Map	8	B3.3	NCBI

TMEM38A
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38.p13 Ensembl	19	16,661,139 - 16,690,023 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh38	19	16,661,139 - 16,690,023 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh37	19	16,771,938 - 16,799,830 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	16,632,938 - 16,660,830 (+)	NCBI	NCBI36		hg18	NCBI36
Build 34	19	16,632,937 - 16,660,814	NCBI
Celera	19	16,673,777 - 16,701,673 (+)	NCBI
Cytogenetic Map	19	p13.11	NCBI
HuRef	19	16,340,650 - 16,368,543 (+)	NCBI		HuRef
CHM1_1	19	16,771,437 - 16,799,383 (+)	NCBI		CHM1_1

Tmem38a
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rnor_6.0	16	18,960,197 - 18,974,942 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	18,959,315 - 18,974,770 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	16	18,822,741 - 18,837,486 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	16	17,669,835 - 17,684,440 (-)	NCBI	RGSC3.4		rn4	RGSC3.4
RGSC_v3.1	16	17,668,985 - 17,684,446 (-)	NCBI
Celera	16	17,478,830 - 17,493,434 (-)	NCBI		Celera
Cytogenetic Map	16	p14	NCBI

Tmem38a
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955524	1,132,111 - 1,144,380 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955524	1,132,111 - 1,144,335 (-)	NCBI	ChiLan1.0	ChiLan1.0

TMEM38A
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	19	17,129,060 - 17,159,002 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	17,129,842 - 17,159,002 (+)	Ensembl	panpan1.1		panPan2
Mhudiblu_PPA_v0	19	16,150,715 - 16,179,256 (+)	NCBI	Mhudiblu_PPA_v0		panPan3

TMEM38A
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1 Ensembl	20	45,877,524 - 45,894,986 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
CanFam3.1	20	45,876,642 - 45,895,054 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1

Tmem38a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
SpeTri2.0	NW_004936596	3,965,220 - 3,984,120 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TMEM38A
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	60,929,049 - 60,960,467 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	60,929,043 - 60,960,527 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	60,517,874 - 60,526,926 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

LOC103234112
(Chlorocebus sabaeus - African green monkey)

Vervet Assembly	Chr	Position (strand)	Source	Genome Browsers
Vervet Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	15,169,143 - 15,200,372 (+)	NCBI
ChlSab1.1 Ensembl	6	15,170,033 - 15,200,481 (+)	Ensembl

Tmem38a
(Heterocephalus glaber - naked mole-rat)

Molerat Assembly	Chr	Position (strand)	Source	Genome Browsers
Molerat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624908	837,753 - 849,972 (-)	NCBI

Position Markers

AI413399

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	8	72,586,987 - 72,587,150	UniSTS	GRCm38
MGSCv37	8	75,110,886 - 75,111,049	UniSTS	GRCm37
Celera	8	76,933,310 - 76,933,473	UniSTS
Cytogenetic Map	8	B3.3	UniSTS
Whitehead/MRC_RH	8	772.05	UniSTS

UniSTS:235927

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	8	72,572,579 - 72,572,787	UniSTS	GRCm38
MGSCv37	8	75,096,478 - 75,096,686	UniSTS	GRCm37
Celera	8	76,918,917 - 76,919,125	UniSTS
Cytogenetic Map	8	B3.3	UniSTS

QTLs in Region (GRCm38)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
14747005	Mancz7_m	mandible centroid size 7 (mouse)					8	50053306	84053306	Mouse
27226754	Femd6_m	femur midshaft diameter 6, 10 week (mouse)					8	37400000	109600000	Mouse
10766466	Char12_m	P. chabaudi malaria resistance QTL 12 (mouse)					8	68269827	82600347	Mouse
1301872	Cd4ts3_m	CD4 T cell subset 3 (mouse)			Not determined		8	71396181	105396393	Mouse
1301952	Im3_m	immunoregulatory 3 (mouse)			Not determined		8	54706614	88706763	Mouse
14700686	Civq3_m	cerebral infarct volume QTL 3 (mouse)					8	51882191	85882191	Mouse
1357787	Vtbt5_m	vertebral trabecular bone trait 5 (mouse)			Not determined		8	65357768	99357920	Mouse
1301544	Iba3_m	induction of brown adipocytes 3 (mouse)			Not determined		8	44294880	78295025	Mouse
4142283	Imraq2_m	immune response to AAV2 QTL 2 (mouse)			Not determined		8	70305375	104305495	Mouse
1301441	Skull11_m	skull morphology 11 (mouse)			Not determined		8	47737134	81737254	Mouse
4141395	Char2a_m	P. chabaudi malaria resistance QTL 2a (mouse)			Not determined			71136783	90202598	Mouse
10766453	Char11_m	P. chabaudi malaria resistance QTL 11 (mouse)					8	47637030	81637146	Mouse
10412287	Carg3_m	Candida albicans resistance gene 3 (mouse)			Not determined		8	55545028	89545028	Mouse
14746987	Manh64_m	mandible shape 64 (mouse)					8	50053306	84053306	Mouse
1558875	Eae31_m	experimental allergic encephalomyelitis susceptibility 31 (mouse)			Not determined		8	34642776	114837007	Mouse
12904744	Carcdq1_m	cardiac collagen deposition QTL 1 (mouse)					8	39709256	94689598	Mouse
4141797	Skmw16_m	skeletal muscle weight 16 (mouse)			Not determined		8	63939547	97939696	Mouse
1301767	Fcsa2_m	femoral cross-sectional area 2 (mouse)			Not determined		8	70305375	104305495	Mouse
4142023	W3q5_m	weight 3 weeks QTL 5 (mouse)			Not determined			71287817	123895615	Mouse
10043992	Hbnr11_m	Heligmosomoides bakeri nematode resistance 11 (mouse)			Not determined		8	65600207	99600347	Mouse
1357708	Orq1_m	ovulation rate QTL 1 (mouse)			Not determined		8	71287817	123895615	Mouse
10043975	Obq31_m	obesity QTL 31 (mouse)			Not determined		8	58409776	92409776	Mouse
1558780	Idd22_m	insulin dependent diabetes susceptibility 22 (mouse)			Not determined		8	71102903	105103009	Mouse
4141285	Tgq18_m	triglyceride QTL 18 (mouse)			Not determined			63460107	97460107	Mouse
11353828	Gf7_m	gonadal fat pad weight 7 (mouse)					8	58201479	92201479	Mouse
1301506	Aevm1_m	autoimmune extremity vasculitis in MRL mice 1 (mouse)			Not determined		8	54287817	88287993	Mouse
1301013	Capsq4_m	capsaicin sensitivity related QTL 4 (mouse)			Not determined		8	36163000	92728652	Mouse
4140967	Bmd39_m	bone mineral density 39 (mouse)			Not determined		8	32016544	117238700	Mouse
1357715	Alaa3_m	alopecia areata 3 (mouse)			Not determined		8	48792939	82793021	Mouse
1301688	Orch6_m	autoimmune orchitis resistance 6 (mouse)			Not determined		8	60786850	94786976	Mouse
1301717	Adip4_m	adiposity 4 (mouse)			Not determined		8	47637030	81637146	Mouse

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	385
Count of miRNA genes:	302
Interacting mature miRNAs:	329
Transcripts:	ENSMUST00000034244
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001357278	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001357279	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001357280	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001357284	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_144534	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NR_151663	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017312988	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_036154325	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AB261158	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC172623	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC182435	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK003216	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK134692	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK157969	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK165818	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK182502	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK186226	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK188870	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK206298	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK210010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK210187	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK215082	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC014728	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC024788	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BU707844	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466525	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	EF988666	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSMUST00000034244 ⟹ ENSMUSP00000034244

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	8	72,572,073 - 72,587,282 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000211914 ⟹ ENSMUSP00000148844

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	8	72,572,091 - 72,586,181 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000212763 ⟹ ENSMUSP00000148388

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	8	72,572,055 - 72,586,175 (+)	Ensembl

RefSeq Acc Id:

NM_001357278 ⟹ NP_001344207

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	8	73,325,667 - 73,341,128 (+)	NCBI
GRCm38	8	72,571,823 - 72,587,284 (+)	NCBI

Sequence:

show sequence

ATTCTAACTACGCAGATGTTTAAGGACAAGATTCCCTCTTGTGTGTGCTGGATGCAGGGGACAG
ATCGCCTTTTTGGCTCTGTTGAACGAGTTCTGACGTCCCTACGGCCCCGCATTTTGGGCTCCCG
GCTGCTAGGAGTCCCCCACCACCCCTCCTCTCCCGAGGGGTGGGGGCAGGCGGGGGGCGGTGCC
TGGCAGTGGGGCGGGCTCAGTGGCGAGGGAGCATTCGTCGGGCAGCGGGGCGCGGGACGCACGG
GGCCGGGGAGGCGCCCTCCATCGCCATGGACCTGATGTCAGCGCTGAGCCTGGGCGAGCTAGCG
CTCAGCTTCTCGCGGGTGCCGCTCTTCCCTGTTTTCGACCTCAGCTACTTCATCGTCTCCATCA
TCTACCTGAAGTATGAGCCAGGAGCTGTGGAGCTGTCCCGGCGCCACCCTGTGGCGTCCTGGCT
GTGTGCCATGTTGCACTGTTTTGGGAGTTACATCCTGGCCGACCTGCTTCTTGGGGAGCCCATC
ATTGACTACTTCAGCAACAGCTCCAGTATCCTGCTGGCCTCTGGAGTGTGCCCCACCAAGGCCA
GTCTGTATGGAGCCATCCTGTTCACCTTGCAGCAGACTCGCTGGCTCCCAGTGTCCAAGGCCAG
CCTCATTTTCGTCTTCACCATGTTTATGGTGTCATGTAAGGTGTTCCTGACAGCCACACACTCC
CACAGTTCTCCATTTGATATCCTGGAGGGTTACATCTGCCCAGTGCTGTTTGGGGCAACTTGGG
GAGGCGACCATCACCATGACAACCATGGAGCACCACATGGCATGGGACTAGGCACCCAGCACTC
CGGCCTGCCTGCCAAGGCCAAGGAAGAGCTGGGCGAAGGATCCAGGAAGAAGAAGACCAAGAAA
GCGGATTAGGGGTTGGCCCCAGGAATCCACTGCGTGCTTGGTAGAAGGATGTGGACTCAAAGAA
ACTCAGAACTTAGGGGCATTCAGGGCTCAGACCCTCCCCTCCCCCCGCCCTGCTCTCTACCACC
CTCAACTTCCCCATCTGCAGTTTGGAGCCATCAGCAATTCCAAGGGCTGATGTGGGCTAAATTA
GTGTGGAGGAATTCAACAGATGTGGAAAACCCTGCCCTCTGCCAGACCCCTCAAAAGGTCACAG
CCTTTGGGGGCACACAGTCTAGGCCCAAAGCCCTGGCTGGTAGGCTCTTGGTTTTCATTCTGTG
TTCTGTCTAATTATATCTTGTAACTAAAAGAATTTAAAGCCACATGGAGACTCAATTATCTAGA
TCCTCTCGAGAGCCAGGTGCTGGGGTCCCATGTCCTTCCGCACTCAGGACCTCCCTAGAATTTT
GTGACTCCTGCTGGACATCTTTAGGCAAATGGCCTTCCTTCTCTGAGCCTTCTGTTTCTGTTCT
GTAGCATGGAGACCCCAGGTCCTCCTGTGTACAAAAGGGTCTTTATAATTTCAAGCAGTTGCTT
AAGCAGCGTGCTAGTGAGAAGGAGACTGGAGCAGCATGAAGGACAGTGGCAGGCTGCTTGGTAT
GTAGGCCATTTGTGTTTGAGGCCAGAAGGTCTCACCAGATACTCAGCTGAGCATGAGCAGGCAC
ATTTAGGGCAGACTGCTAACAGGAGGGGGGCTTGAGTTCCTAGGTGCCCACAGGTAAGAGGTGT
GGGTGCAGAGCAGAGGGTCCAAGAGCCAACAGCCTTGGTTACTCACAATTGGGCTCTGGGTGTA
TCAGGTGTCCCTCATGCCTGATCAGCATAGTTCATTCAGTCATTCAACAAACACACAGATCCAC
ACATGCTCGCTATACAGTGTCATGCTGCTCCTCTTAGGAGCGAGCCTTATACAGGGGAAGGGCC
ATGGTCGCCAAAGTCTCCAGGGCACCTGAGAGAGGTGAGCATGGGGTCCTGCTGGTCTCAGGCT
TATGTGAGGCTCAGATCTAGTTGAAGTACCCAGTGTAGCCCATTTGTTGAGAAAATGCTCCTCA
TAACTTTGCCTGGAGGTAGGGTAGGCCCTGAGGCTGGAAGCTCCCGAGTTTCATCCCCTTGATG
TCAATCAAAGCTCAGTGTGAGTGATCAGCCAATAAATCTGGTGCGAGTAAATCAA

hide sequence

RefSeq Acc Id:

NM_001357279 ⟹ NP_001344208

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	8	73,325,667 - 73,341,128 (+)	NCBI
GRCm38	8	72,571,823 - 72,587,284 (+)	NCBI

Sequence:

show sequence

ATTCTAACTACGCAGATGTTTAAGGACAAGATTCCCTCTTGTGTGTGCTGGATGCAGGGGACAG
ATCGCCTTTTTGGCTCTGTTGAACGAGTTCTGACGTCCCTACGGCCCCGCATTTTGGGCTCCCG
GCTGCTAGGAGTCCCCCACCACCCCTCCTCTCCCGAGGGGTGGGGGCAGGCGGGGGGCGGTGCC
TGGCAGTGGGGCGGGCTCAGTGGCGAGGGAGCATTCGTCGGGCAGCGGGGCGCGGGACGCACGG
GGCCGGGGAGGCGCCCTCCATCGCCATGGACCTGATGTCAGCGCTGAGCCTGGGCGAGCTAGCG
CTCAGCTTCTCGCGGGTGCCGCTCTTCCCTGTTTTCGACCTCAGCTACTTCATCGTCTCCATCA
TCTACCTGAAGTATGAGCCAGGAGCTGTGGAGCTGTCCCGGCGCCACCCTGTGGCGTCCTGGCT
GTGTGCCATGTTGCACTGTTTTGGGAGTTACATCCTGGCCGACCTGCTTCTTGGGGAGCCCATC
ATTGACTACTTCAGCAACAGCTCCAGTATCCTGCTGGCCTCTGGAGTGTGGTACTTGATTTTCT
TCTGTCCCTTGGACCTCTTCTACAAGTGTGTCTGCTTTCTGCCCGTAAAACTCATCTTTGTGGC
TATGAAGGAGGTGGTGAGGGTCCGAAAGATCGCTGTGGGCATCCATCACGCACACCACCACTAC
CACCACGGGTGGTTCATCATGATCGCCACCGGGTGGGTCAAAGGGTCTGGTGTTGCCCTCCTGT
CCAACGTGGAACAGTTGCTTCGAGGTGTCTGGAAGCCAGAAACTAATGAGATCCTGCACATGTC
CTTGTGTTCCTGACAGCCACACACTCCCACAGTTCTCCATTTGATATCCTGGAGGGTTACATCT
GCCCAGTGCTGTTTGGGGCAACTTGGGGAGGCGACCATCACCATGACAACCATGGAGCACCACA
TGGCATGGGACTAGGCACCCAGCACTCCGGCCTGCCTGCCAAGGCCAAGGAAGAGCTGGGCGAA
GGATCCAGGAAGAAGAAGACCAAGAAAGCGGATTAGGGGTTGGCCCCAGGAATCCACTGCGTGC
TTGGTAGAAGGATGTGGACTCAAAGAAACTCAGAACTTAGGGGCATTCAGGGCTCAGACCCTCC
CCTCCCCCCGCCCTGCTCTCTACCACCCTCAACTTCCCCATCTGCAGTTTGGAGCCATCAGCAA
TTCCAAGGGCTGATGTGGGCTAAATTAGTGTGGAGGAATTCAACAGATGTGGAAAACCCTGCCC
TCTGCCAGACCCCTCAAAAGGTCACAGCCTTTGGGGGCACACAGTCTAGGCCCAAAGCCCTGGC
TGGTAGGCTCTTGGTTTTCATTCTGTGTTCTGTCTAATTATATCTTGTAACTAAAAGAATTTAA
AGCCACATGGAGACTCAATTATCTAGATCCTCTCGAGAGCCAGGTGCTGGGGTCCCATGTCCTT
CCGCACTCAGGACCTCCCTAGAATTTTGTGACTCCTGCTGGACATCTTTAGGCAAATGGCCTTC
CTTCTCTGAGCCTTCTGTTTCTGTTCTGTAGCATGGAGACCCCAGGTCCTCCTGTGTACAAAAG
GGTCTTTATAATTTCAAGCAGTTGCTTAAGCAGCGTGCTAGTGAGAAGGAGACTGGAGCAGCAT
GAAGGACAGTGGCAGGCTGCTTGGTATGTAGGCCATTTGTGTTTGAGGCCAGAAGGTCTCACCA
GATACTCAGCTGAGCATGAGCAGGCACATTTAGGGCAGACTGCTAACAGGAGGGGGGCTTGAGT
TCCTAGGTGCCCACAGGTAAGAGGTGTGGGTGCAGAGCAGAGGGTCCAAGAGCCAACAGCCTTG
GTTACTCACAATTGGGCTCTGGGTGTATCAGGTGTCCCTCATGCCTGATCAGCATAGTTCATTC
AGTCATTCAACAAACACACAGATCCACACATGCTCGCTATACAGTGTCATGCTGCTCCTCTTAG
GAGCGAGCCTTATACAGGGGAAGGGCCATGGTCGCCAAAGTCTCCAGGGCACCTGAGAGAGGTG
AGCATGGGGTCCTGCTGGTCTCAGGCTTATGTGAGGCTCAGATCTAGTTGAAGTACCCAGTGTA
GCCCATTTGTTGAGAAAATGCTCCTCATAACTTTGCCTGGAGGTAGGGTAGGCCCTGAGGCTGG
AAGCTCCCGAGTTTCATCCCCTTGATGTCAATCAAAGCTCAGTGTGAGTGATCAGCCAATAAAT
CTGGTGCGAGTAAATCAA

hide sequence

RefSeq Acc Id:

NM_001357280 ⟹ NP_001344209

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	8	73,325,667 - 73,341,128 (+)	NCBI
GRCm38	8	72,571,823 - 72,587,284 (+)	NCBI

Sequence:

show sequence

ATTCTAACTACGCAGATGTTTAAGGACAAGATTCCCTCTTGTGTGTGCTGGATGCAGGGGACAG
ATCGCCTTTTTGGCTCTGTTGAACGAGTTCTGACGTCCCTACGGCCCCGCATTTTGGGCTCCCG
GCTGCTAGGAGTCCCCCACCACCCCTCCTCTCCCGAGGGGTGGGGGCAGGCGGGGGGCGGTGCC
TGGCAGTGGGGCGGGCTCAGTGGCGAGGGAGCATTCGTCGGGCAGCGGGGCGCGGGACGCACGG
GGCCGGGGAGGCGCCCTCCATCGCCATGGACCTGATGTCAGCGCTGAGCCTGGGCGAGCTAGCG
CTCAGCTTCTCGCGGGTGCCGCTCTTCCCTGTTTTCGACCTCAGCTACTTCATCGTCTCCATCA
TCTACCTGAAGTATGAGCCAGGAGCTGTGGAGCTGTCCCGGCGCCACCCTGTGGCGTCCTGGCT
GTGTGCCATGTTGCACTGTTTTGGGAGTTACATCCTGGCCGACCTGCTTCTTGGGGAGCCCATC
ATTGACTACTTCAGCAACAGCTCCAGTATCCTGCTGGCCTCTGGAGTGTGGTACTTGATTTTCT
TCTGTCCCTTGGACCTCTTCTACAAGTGTGTCTGCTTTCTGCCCGTAAAACTCATCTTTGTGGC
TATGAAGGAGGTGGTGAGGGTCCGAAAGATCGCTGTGGGCATCCATCACGCACACCACCACTAC
CACCACGGGTGGTTCATCATGATCGCCACCGGGTGGGTCAAAGTTGCTTCGAGGTGTCTGGAAG
CCAGAAACTAATGAGATCCTGCACATGTCCTTGTGTTCCTGACAGCCACACACTCCCACAGTTC
TCCATTTGATATCCTGGAGGGTTACATCTGCCCAGTGCTGTTTGGGGCAACTTGGGGAGGCGAC
CATCACCATGACAACCATGGAGCACCACATGGCATGGGACTAGGCACCCAGCACTCCGGCCTGC
CTGCCAAGGCCAAGGAAGAGCTGGGCGAAGGATCCAGGAAGAAGAAGACCAAGAAAGCGGATTA
GGGGTTGGCCCCAGGAATCCACTGCGTGCTTGGTAGAAGGATGTGGACTCAAAGAAACTCAGAA
CTTAGGGGCATTCAGGGCTCAGACCCTCCCCTCCCCCCGCCCTGCTCTCTACCACCCTCAACTT
CCCCATCTGCAGTTTGGAGCCATCAGCAATTCCAAGGGCTGATGTGGGCTAAATTAGTGTGGAG
GAATTCAACAGATGTGGAAAACCCTGCCCTCTGCCAGACCCCTCAAAAGGTCACAGCCTTTGGG
GGCACACAGTCTAGGCCCAAAGCCCTGGCTGGTAGGCTCTTGGTTTTCATTCTGTGTTCTGTCT
AATTATATCTTGTAACTAAAAGAATTTAAAGCCACATGGAGACTCAATTATCTAGATCCTCTCG
AGAGCCAGGTGCTGGGGTCCCATGTCCTTCCGCACTCAGGACCTCCCTAGAATTTTGTGACTCC
TGCTGGACATCTTTAGGCAAATGGCCTTCCTTCTCTGAGCCTTCTGTTTCTGTTCTGTAGCATG
GAGACCCCAGGTCCTCCTGTGTACAAAAGGGTCTTTATAATTTCAAGCAGTTGCTTAAGCAGCG
TGCTAGTGAGAAGGAGACTGGAGCAGCATGAAGGACAGTGGCAGGCTGCTTGGTATGTAGGCCA
TTTGTGTTTGAGGCCAGAAGGTCTCACCAGATACTCAGCTGAGCATGAGCAGGCACATTTAGGG
CAGACTGCTAACAGGAGGGGGGCTTGAGTTCCTAGGTGCCCACAGGTAAGAGGTGTGGGTGCAG
AGCAGAGGGTCCAAGAGCCAACAGCCTTGGTTACTCACAATTGGGCTCTGGGTGTATCAGGTGT
CCCTCATGCCTGATCAGCATAGTTCATTCAGTCATTCAACAAACACACAGATCCACACATGCTC
GCTATACAGTGTCATGCTGCTCCTCTTAGGAGCGAGCCTTATACAGGGGAAGGGCCATGGTCGC
CAAAGTCTCCAGGGCACCTGAGAGAGGTGAGCATGGGGTCCTGCTGGTCTCAGGCTTATGTGAG
GCTCAGATCTAGTTGAAGTACCCAGTGTAGCCCATTTGTTGAGAAAATGCTCCTCATAACTTTG
CCTGGAGGTAGGGTAGGCCCTGAGGCTGGAAGCTCCCGAGTTTCATCCCCTTGATGTCAATCAA
AGCTCAGTGTGAGTGATCAGCCAATAAATCTGGTGCGAGTAAATCAA

hide sequence

RefSeq Acc Id:

NM_001357284 ⟹ NP_001344213

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	8	73,325,667 - 73,341,128 (+)	NCBI
GRCm38	8	72,571,823 - 72,587,284 (+)	NCBI

Sequence:

show sequence

ATTCTAACTACGCAGATGTTTAAGGACAAGATTCCCTCTTGTGTGTGCTGGATGCAGGGGACAG
ATCGCCTTTTTGGCTCTGTTGAACGAGTTCTGACGTCCCTACGGCCCCGCATTTTGGGCTCCCG
GCTGCTAGGAGTCCCCCACCACCCCTCCTCTCCCGAGGGGTGGGGGCAGGCGGGGGGCGGTGCC
TGGCAGTGGGGCGGGCTCAGTGGCGAGGGAGCATTCGTCGGGCAGCGGGGCGCGGGACGCACGG
GGCCGGGGAGGCGCCCTCCATCGCCATGGACCTGATGTCAGCGCTGAGCCTGGGCGAGCTAGCG
CTCAGCTTCTCGCGGGTGCCGCTCTTCCCTGTTTTCGACCTCAGCTACTTCATCGTCTCCATCA
TCTACCTGAAGTATGAGCCAGGAGCTGTGGAGCTGTCCCGGCGCCACCCTGTGGCGTCCTGGCT
GTGTGCCATGTTGCACTGTTTTGGGAGTTACATCCTGGCCGACCTGCTTCTTGGGGAGCCCATC
ATTGACTACTTCAGCAACAGCTCCAGTATCCTGCTGGCCTCTGGAGTGTGGGTCTGGTGTTGCC
CTCCTGTCCAACGTGGAACAGTTGCTTCGAGGTGTCTGGAAGCCAGAAACTAATGAGATCCTGC
ACATGTCCTTCCCCACCAAGGCCAGTCTGTATGGAGCCATCCTGTTCACCTTGCAGCAGACTCG
CTGGCTCCCAGTGTCCAAGGCCAGCCTCATTTTCGTCTTCACCATGTTTATGGTGTCATGTAAG
GTGTTCCTGACAGCCACACACTCCCACAGTTCTCCATTTGATATCCTGGAGGGTTACATCTGCC
CAGTGCTGTTTGGGGCAACTTGGGGAGGCGACCATCACCATGACAACCATGGAGCACCACATGG
CATGGGACTAGGCACCCAGCACTCCGGCCTGCCTGCCAAGGCCAAGGAAGAGCTGGGCGAAGGA
TCCAGGAAGAAGAAGACCAAGAAAGCGGATTAGGGGTTGGCCCCAGGAATCCACTGCGTGCTTG
GTAGAAGGATGTGGACTCAAAGAAACTCAGAACTTAGGGGCATTCAGGGCTCAGACCCTCCCCT
CCCCCCGCCCTGCTCTCTACCACCCTCAACTTCCCCATCTGCAGTTTGGAGCCATCAGCAATTC
CAAGGGCTGATGTGGGCTAAATTAGTGTGGAGGAATTCAACAGATGTGGAAAACCCTGCCCTCT
GCCAGACCCCTCAAAAGGTCACAGCCTTTGGGGGCACACAGTCTAGGCCCAAAGCCCTGGCTGG
TAGGCTCTTGGTTTTCATTCTGTGTTCTGTCTAATTATATCTTGTAACTAAAAGAATTTAAAGC
CACATGGAGACTCAATTATCTAGATCCTCTCGAGAGCCAGGTGCTGGGGTCCCATGTCCTTCCG
CACTCAGGACCTCCCTAGAATTTTGTGACTCCTGCTGGACATCTTTAGGCAAATGGCCTTCCTT
CTCTGAGCCTTCTGTTTCTGTTCTGTAGCATGGAGACCCCAGGTCCTCCTGTGTACAAAAGGGT
CTTTATAATTTCAAGCAGTTGCTTAAGCAGCGTGCTAGTGAGAAGGAGACTGGAGCAGCATGAA
GGACAGTGGCAGGCTGCTTGGTATGTAGGCCATTTGTGTTTGAGGCCAGAAGGTCTCACCAGAT
ACTCAGCTGAGCATGAGCAGGCACATTTAGGGCAGACTGCTAACAGGAGGGGGGCTTGAGTTCC
TAGGTGCCCACAGGTAAGAGGTGTGGGTGCAGAGCAGAGGGTCCAAGAGCCAACAGCCTTGGTT
ACTCACAATTGGGCTCTGGGTGTATCAGGTGTCCCTCATGCCTGATCAGCATAGTTCATTCAGT
CATTCAACAAACACACAGATCCACACATGCTCGCTATACAGTGTCATGCTGCTCCTCTTAGGAG
CGAGCCTTATACAGGGGAAGGGCCATGGTCGCCAAAGTCTCCAGGGCACCTGAGAGAGGTGAGC
ATGGGGTCCTGCTGGTCTCAGGCTTATGTGAGGCTCAGATCTAGTTGAAGTACCCAGTGTAGCC
CATTTGTTGAGAAAATGCTCCTCATAACTTTGCCTGGAGGTAGGGTAGGCCCTGAGGCTGGAAG
CTCCCGAGTTTCATCCCCTTGATGTCAATCAAAGCTCAGTGTGAGTGATCAGCCAATAAATCTG
GTGCGAGTAAATCAA

hide sequence

RefSeq Acc Id:

NM_144534 ⟹ NP_653117

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	8	73,325,667 - 73,341,128 (+)	NCBI
GRCm38	8	72,571,823 - 72,587,284 (+)	NCBI
MGSCv37	8	75,096,002 - 75,111,183 (+)	RGD
Celera	8	76,918,441 - 76,933,607 (+)	RGD
cM Map	8		ENTREZGENE

Sequence:

show sequence

ATTCTAACTACGCAGATGTTTAAGGACAAGATTCCCTCTTGTGTGTGCTGGATGCAGGGGACAG
ATCGCCTTTTTGGCTCTGTTGAACGAGTTCTGACGTCCCTACGGCCCCGCATTTTGGGCTCCCG
GCTGCTAGGAGTCCCCCACCACCCCTCCTCTCCCGAGGGGTGGGGGCAGGCGGGGGGCGGTGCC
TGGCAGTGGGGCGGGCTCAGTGGCGAGGGAGCATTCGTCGGGCAGCGGGGCGCGGGACGCACGG
GGCCGGGGAGGCGCCCTCCATCGCCATGGACCTGATGTCAGCGCTGAGCCTGGGCGAGCTAGCG
CTCAGCTTCTCGCGGGTGCCGCTCTTCCCTGTTTTCGACCTCAGCTACTTCATCGTCTCCATCA
TCTACCTGAAGTATGAGCCAGGAGCTGTGGAGCTGTCCCGGCGCCACCCTGTGGCGTCCTGGCT
GTGTGCCATGTTGCACTGTTTTGGGAGTTACATCCTGGCCGACCTGCTTCTTGGGGAGCCCATC
ATTGACTACTTCAGCAACAGCTCCAGTATCCTGCTGGCCTCTGGAGTGTGGTACTTGATTTTCT
TCTGTCCCTTGGACCTCTTCTACAAGTGTGTCTGCTTTCTGCCCGTAAAACTCATCTTTGTGGC
TATGAAGGAGGTGGTGAGGGTCCGAAAGATCGCTGTGGGCATCCATCACGCACACCACCACTAC
CACCACGGGTGGTTCATCATGATCGCCACCGGGTGGGTCAAAGGGTCTGGTGTTGCCCTCCTGT
CCAACGTGGAACAGTTGCTTCGAGGTGTCTGGAAGCCAGAAACTAATGAGATCCTGCACATGTC
CTTCCCCACCAAGGCCAGTCTGTATGGAGCCATCCTGTTCACCTTGCAGCAGACTCGCTGGCTC
CCAGTGTCCAAGGCCAGCCTCATTTTCGTCTTCACCATGTTTATGGTGTCATGTAAGGTGTTCC
TGACAGCCACACACTCCCACAGTTCTCCATTTGATATCCTGGAGGGTTACATCTGCCCAGTGCT
GTTTGGGGCAACTTGGGGAGGCGACCATCACCATGACAACCATGGAGCACCACATGGCATGGGA
CTAGGCACCCAGCACTCCGGCCTGCCTGCCAAGGCCAAGGAAGAGCTGGGCGAAGGATCCAGGA
AGAAGAAGACCAAGAAAGCGGATTAGGGGTTGGCCCCAGGAATCCACTGCGTGCTTGGTAGAAG
GATGTGGACTCAAAGAAACTCAGAACTTAGGGGCATTCAGGGCTCAGACCCTCCCCTCCCCCCG
CCCTGCTCTCTACCACCCTCAACTTCCCCATCTGCAGTTTGGAGCCATCAGCAATTCCAAGGGC
TGATGTGGGCTAAATTAGTGTGGAGGAATTCAACAGATGTGGAAAACCCTGCCCTCTGCCAGAC
CCCTCAAAAGGTCACAGCCTTTGGGGGCACACAGTCTAGGCCCAAAGCCCTGGCTGGTAGGCTC
TTGGTTTTCATTCTGTGTTCTGTCTAATTATATCTTGTAACTAAAAGAATTTAAAGCCACATGG
AGACTCAATTATCTAGATCCTCTCGAGAGCCAGGTGCTGGGGTCCCATGTCCTTCCGCACTCAG
GACCTCCCTAGAATTTTGTGACTCCTGCTGGACATCTTTAGGCAAATGGCCTTCCTTCTCTGAG
CCTTCTGTTTCTGTTCTGTAGCATGGAGACCCCAGGTCCTCCTGTGTACAAAAGGGTCTTTATA
ATTTCAAGCAGTTGCTTAAGCAGCGTGCTAGTGAGAAGGAGACTGGAGCAGCATGAAGGACAGT
GGCAGGCTGCTTGGTATGTAGGCCATTTGTGTTTGAGGCCAGAAGGTCTCACCAGATACTCAGC
TGAGCATGAGCAGGCACATTTAGGGCAGACTGCTAACAGGAGGGGGGCTTGAGTTCCTAGGTGC
CCACAGGTAAGAGGTGTGGGTGCAGAGCAGAGGGTCCAAGAGCCAACAGCCTTGGTTACTCACA
ATTGGGCTCTGGGTGTATCAGGTGTCCCTCATGCCTGATCAGCATAGTTCATTCAGTCATTCAA
CAAACACACAGATCCACACATGCTCGCTATACAGTGTCATGCTGCTCCTCTTAGGAGCGAGCCT
TATACAGGGGAAGGGCCATGGTCGCCAAAGTCTCCAGGGCACCTGAGAGAGGTGAGCATGGGGT
CCTGCTGGTCTCAGGCTTATGTGAGGCTCAGATCTAGTTGAAGTACCCAGTGTAGCCCATTTGT
TGAGAAAATGCTCCTCATAACTTTGCCTGGAGGTAGGGTAGGCCCTGAGGCTGGAAGCTCCCGA
GTTTCATCCCCTTGATGTCAATCAAAGCTCAGTGTGAGTGATCAGCCAATAAATCTGGTGCGAG
TAAATCAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

NR_151663

RefSeq Status:

VALIDATED

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	8	73,325,667 - 73,341,128 (+)	NCBI
GRCm38	8	72,571,823 - 72,587,284 (+)	NCBI

Sequence:

show sequence

ATTCTAACTACGCAGATGTTTAAGGACAAGATTCCCTCTTGTGTGTGCTGGATGCAGGGGACAG
ATCGCCTTTTTGGCTCTGTTGAACGAGTTCTGACGTCCCTACGGCCCCGCATTTTGGGCTCCCG
GCTGCTAGGAGTCCCCCACCACCCCTCCTCTCCCGAGGGGTGGGGGCAGGCGGGGGGCGGTGCC
TGGCAGTGGGGCGGGCTCAGTGGCGAGGGAGCATTCGTCGGGCAGCGGGGCGCGGGACGCACGG
GGCCGGGGAGGCGCCCTCCATCGCCATGGACCTGATGTCAGCGCTGAGCCTGGGCGAGCTAGCG
CTCAGCTTCTCGCGGGTGCCGCTCTTCCCTGTTTTCGACCTCAGCTACTTCATCGTCTCCATCA
TCTACCTGAAGTATGAGCCAGCCCCACCAAGGCCAGTCTGTATGGAGCCATCCTGTTCACCTTG
CAGCAGACTCGCTGGCTCCCAGTGTCCAAGGCCAGCCTCATTTTCGTCTTCACCATGTTTATGG
TGTCATGTAAGGTGTTCCTGACAGCCACACACTCCCACAGTTCTCCATTTGATATCCTGGAGGG
TTACATCTGCCCAGTGCTGTTTGGGGCAACTTGGGGAGGCGACCATCACCATGACAACCATGGA
GCACCACATGGCATGGGACTAGGCACCCAGCACTCCGGCCTGCCTGCCAAGGCCAAGGAAGAGC
TGGGCGAAGGATCCAGGAAGAAGAAGACCAAGAAAGCGGATTAGGGGTTGGCCCCAGGAATCCA
CTGCGTGCTTGGTAGAAGGATGTGGACTCAAAGAAACTCAGAACTTAGGGGCATTCAGGGCTCA
GACCCTCCCCTCCCCCCGCCCTGCTCTCTACCACCCTCAACTTCCCCATCTGCAGTTTGGAGCC
ATCAGCAATTCCAAGGGCTGATGTGGGCTAAATTAGTGTGGAGGAATTCAACAGATGTGGAAAA
CCCTGCCCTCTGCCAGACCCCTCAAAAGGTCACAGCCTTTGGGGGCACACAGTCTAGGCCCAAA
GCCCTGGCTGGTAGGCTCTTGGTTTTCATTCTGTGTTCTGTCTAATTATATCTTGTAACTAAAA
GAATTTAAAGCCACATGGAGACTCAATTATCTAGATCCTCTCGAGAGCCAGGTGCTGGGGTCCC
ATGTCCTTCCGCACTCAGGACCTCCCTAGAATTTTGTGACTCCTGCTGGACATCTTTAGGCAAA
TGGCCTTCCTTCTCTGAGCCTTCTGTTTCTGTTCTGTAGCATGGAGACCCCAGGTCCTCCTGTG
TACAAAAGGGTCTTTATAATTTCAAGCAGTTGCTTAAGCAGCGTGCTAGTGAGAAGGAGACTGG
AGCAGCATGAAGGACAGTGGCAGGCTGCTTGGTATGTAGGCCATTTGTGTTTGAGGCCAGAAGG
TCTCACCAGATACTCAGCTGAGCATGAGCAGGCACATTTAGGGCAGACTGCTAACAGGAGGGGG
GCTTGAGTTCCTAGGTGCCCACAGGTAAGAGGTGTGGGTGCAGAGCAGAGGGTCCAAGAGCCAA
CAGCCTTGGTTACTCACAATTGGGCTCTGGGTGTATCAGGTGTCCCTCATGCCTGATCAGCATA
GTTCATTCAGTCATTCAACAAACACACAGATCCACACATGCTCGCTATACAGTGTCATGCTGCT
CCTCTTAGGAGCGAGCCTTATACAGGGGAAGGGCCATGGTCGCCAAAGTCTCCAGGGCACCTGA
GAGAGGTGAGCATGGGGTCCTGCTGGTCTCAGGCTTATGTGAGGCTCAGATCTAGTTGAAGTAC
CCAGTGTAGCCCATTTGTTGAGAAAATGCTCCTCATAACTTTGCCTGGAGGTAGGGTAGGCCCT
GAGGCTGGAAGCTCCCGAGTTTCATCCCCTTGATGTCAATCAAAGCTCAGTGTGAGTGATCAGC
CAATAAATCTGGTGCGAGTAAATCAA

hide sequence

RefSeq Acc Id:

XM_017312988 ⟹ XP_017168477

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	8	73,325,033 - 73,341,128 (+)	NCBI
GRCm38	8	72,571,189 - 72,587,284 (+)	NCBI

Sequence:

show sequence

TGCTCAGTGTTACGTGCCACAGCTGGTCCCTGCTGTTGATGCCGCTCGGGGGTTGGTTGGGCTA
TGGATTCCGGGCTACAGAAATTGCGCCCTTGACCCTTGAGCCGCCCGTGAACGGCTTGGATATG
GATATGGGCGCGGCAGATGCCTGAACTCCAAAAGGACTCCACTTGGGTCCCCACGGAGAACTGC
GATCCCGGCTCAGAGTGCATAGAGTCAGGATGACCTCCTGCCTGAGTTGTACCTCCCACGGACC
TCCCAGGTCTGACTCGAGTAACCCCACGGAGAATGAGAGTCCTGACCGGACAGACTTACAGAAC
ATAAGGCCTGGATTAAGGTCTACAGAGGATGGATCTTAACTTGTGGGGCCTCCTGAAGCGGGAG
GGTCCTAACTTAGTGGATCCAGTCTGGGCTGGGGTCCACAAAGAGGAGGGTTCTGACTTGTGGA
GCCTTTTAGAGAGACAAAACCAAACAGAACGTGAGGGTTTGGTTGAGGTCCCCTTGTGGGAGGC
GGGGTTCTGACTTTGGATCCTCAGGAATGAAACATGATATTCTTGGCTGAGATCTTCCGAGGGC
GCGGGTTTTGAGGGAAATAGGGGTCCTGAATTGGTTAGTCCCATGGAAAAGGGACAGGATTCTA
ACTACGCAGATGTTTAAGGACAAGATTCCCTCTTGTGTGTGCTGGATGCAGGGGACAGATCGCC
TTTTTGGCTCTGTTGAACGAGTTCTGACGTCCCTACGGCCCCGCATTTTGGGCTCCCGGCTGCT
AGGAGTCCCCCACCACCCCTCCTCTCCCGAGGGGTGGGGGCAGGCGGGGGGCGGTGCCTGGCAG
TGGGGCGGGCTCAGTGGCGAGGGAGCATTCGTCGGGCAGCGGGGCGCGGGACGCACGGGGCCGG
GGAGGCGCCCTCCATCGCCATGGACCTGATGTCAGCGCTGAGCCTGGGCGAGCTAGCGCTCAGC
TTCTCGCGGGTGCCGCTCTTCCCTGTTTTCGACCTCAGCTACTTCATCGTCTCCATCATCTACC
TGAAGTATGAGCCAGGAGCTGTGGAGCTGTCCCGGCGCCACCCTGTGGCGTCCTGGCTGTGTGC
CATGTTGCACTGTTTTGGGAGTTACATCCTGGCCGACCTGCTTCTTGGGGAGCCCATCATTGAC
TACTTCAGCAACAGCTCCAGTATCCTGCTGGCCTCTGGAGTGTGGTACTTGATTTTCTTCTGTC
CCTTGGACCTCTTCTACAAGTGTGTCTGCTTTCTGCCCGTAAAACTCATCTTTGTGGCTATGAA
GGAGGTGGTGAGGGTCCGAAAGATCGCTGTGGGCATCCATCACGCACACCACCACTACCACCAC
GGGTGGTTCATCATGATCGCCACCGGGTGGGTCAAAGCCCCACCAAGGCCAGTCTGTATGGAGC
CATCCTGTTCACCTTGCAGCAGACTCGCTGGCTCCCAGTGTCCAAGGCCAGCCTCATTTTCGTC
TTCACCATGTTTATGGTGTCATGTAAGGTGTTCCTGACAGCCACACACTCCCACAGTTCTCCAT
TTGATATCCTGGAGGGTTACATCTGCCCAGTGCTGTTTGGGGCAACTTGGGGAGGCGACCATCA
CCATGACAACCATGGAGCACCACATGGCATGGGACTAGGCACCCAGCACTCCGGCCTGCCTGCC
AAGGCCAAGGAAGAGCTGGGCGAAGGATCCAGGAAGAAGAAGACCAAGAAAGCGGATTAGGGGT
TGGCCCCAGGAATCCACTGCGTGCTTGGTAGAAGGATGTGGACTCAAAGAAACTCAGAACTTAG
GGGCATTCAGGGCTCAGACCCTCCCCTCCCCCCGCCCTGCTCTCTACCACCCTCAACTTCCCCA
TCTGCAGTTTGGAGCCATCAGCAATTCCAAGGGCTGATGTGGGCTAAATTAGTGTGGAGGAATT
CAACAGATGTGGAAAACCCTGCCCTCTGCCAGACCCCTCAAAAGGTCACAGCCTTTGGGGGCAC
ACAGTCTAGGCCCAAAGCCCTGGCTGGTAGGCTCTTGGTTTTCATTCTGTGTTCTGTCTAATTA
TATCTTGTAACTAAAAGAATTTAAAGCCACATGGAGACTCAATTATCTAGATCCTCTCGAGAGC
CAGGTGCTGGGGTCCCATGTCCTTCCGCACTCAGGACCTCCCTAGAATTTTGTGACTCCTGCTG
GACATCTTTAGGCAAATGGCCTTCCTTCTCTGAGCCTTCTGTTTCTGTTCTGTAGCATGGAGAC
CCCAGGTCCTCCTGTGTACAAAAGGGTCTTTATAATTTCAAGCAGTTGCTTAAGCAGCGTGCTA
GTGAGAAGGAGACTGGAGCAGCATGAAGGACAGTGGCAGGCTGCTTGGTATGTAGGCCATTTGT
GTTTGAGGCCAGAAGGTCTCACCAGATACTCAGCTGAGCATGAGCAGGCACATTTAGGGCAGAC
TGCTAACAGGAGGGGGGCTTGAGTTCCTAGGTGCCCACAGGTAAGAGGTGTGGGTGCAGAGCAG
AGGGTCCAAGAGCCAACAGCCTTGGTTACTCACAATTGGGCTCTGGGTGTATCAGGTGTCCCTC
ATGCCTGATCAGCATAGTTCATTCAGTCATTCAACAAACACACAGATCCACACATGCTCGCTAT
ACAGTGTCATGCTGCTCCTCTTAGGAGCGAGCCTTATACAGGGGAAGGGCCATGGTCGCCAAAG
TCTCCAGGGCACCTGAGAGAGGTGAGCATGGGGTCCTGCTGGTCTCAGGCTTATGTGAGGCTCA
GATCTAGTTGAAGTACCCAGTGTAGCCCATTTGTTGAGAAAATGCTCCTCATAACTTTGCCTGG
AGGTAGGGTAGGCCCTGAGGCTGGAAGCTCCCGAGTTTCATCCCCTTGATGTCAATCAAAGCTC
AGTGTGAGTGATCAGCCAATAAATCTGGTGCGAGTAAATCAA

hide sequence

RefSeq Acc Id:

XM_036154325 ⟹ XP_036010218

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	8	73,325,866 - 73,341,128 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001344207	(Get FASTA)	NCBI Sequence Viewer
	NP_001344208	(Get FASTA)	NCBI Sequence Viewer
	NP_001344209	(Get FASTA)	NCBI Sequence Viewer
	NP_001344213	(Get FASTA)	NCBI Sequence Viewer
	NP_653117	(Get FASTA)	NCBI Sequence Viewer
	XP_017168477	(Get FASTA)	NCBI Sequence Viewer
	XP_036010218	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH14728	(Get FASTA)	NCBI Sequence Viewer
	AAH24788	(Get FASTA)	NCBI Sequence Viewer
	ABS17665	(Get FASTA)	NCBI Sequence Viewer
	BAE34290	(Get FASTA)	NCBI Sequence Viewer
	BAE38393	(Get FASTA)	NCBI Sequence Viewer
	BAF62541	(Get FASTA)	NCBI Sequence Viewer
	EDL10807	(Get FASTA)	NCBI Sequence Viewer
	EDL10808	(Get FASTA)	NCBI Sequence Viewer
	EDL10809	(Get FASTA)	NCBI Sequence Viewer
	Q3TMP8	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:	NP_653117 ⟸ NM_144534
- Peptide Label:	isoform 1
- UniProtKB:	Q3TMP8 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MDLMSALSLGELALSFSRVPLFPVFDLSYFIVSIIYLKYEPGAVELSRRHPVASWLCAMLHCFG SYILADLLLGEPIIDYFSNSSSILLASGVWYLIFFCPLDLFYKCVCFLPVKLIFVAMKEVVRVR KIAVGIHHAHHHYHHGWFIMIATGWVKGSGVALLSNVEQLLRGVWKPETNEILHMSFPTKASLY GAILFTLQQTRWLPVSKASLIFVFTMFMVSCKVFLTATHSHSSPFDILEGYICPVLFGATWGGD HHHDNHGAPHGMGLGTQHSGLPAKAKEELGEGSRKKKTKKAD hide sequence

RefSeq Acc Id:	XP_017168477 ⟸ XM_017312988
- Peptide Label:	isoform X2
- Sequence:	show sequence MDLMSALSLGELALSFSRVPLFPVFDLSYFIVSIIYLKYEPGAVELSRRHPVASWLCAMLHCFG SYILADLLLGEPIIDYFSNSSSILLASGVWYLIFFCPLDLFYKCVCFLPVKLIFVAMKEVVRVR KIAVGIHHAHHHYHHGWFIMIATGWVKAPPRPVCMEPSCSPCSRLAGSQCPRPASFSSSPCLWC HVRCS hide sequence

RefSeq Acc Id:	NP_001344208 ⟸ NM_001357279
- Peptide Label:	isoform 3

RefSeq Acc Id:	NP_001344209 ⟸ NM_001357280
- Peptide Label:	isoform 4

RefSeq Acc Id:	NP_001344213 ⟸ NM_001357284
- Peptide Label:	isoform 5

RefSeq Acc Id:	NP_001344207 ⟸ NM_001357278
- Peptide Label:	isoform 2

RefSeq Acc Id:

ENSMUSP00000148844 ⟸ ENSMUST00000211914

RefSeq Acc Id:

ENSMUSP00000034244 ⟸ ENSMUST00000034244

RefSeq Acc Id:

ENSMUSP00000148388 ⟸ ENSMUST00000212763

RefSeq Acc Id:	XP_036010218 ⟸ XM_036154325
- Peptide Label:	isoform X1

Promoters

RGD ID:

8667495

Promoter ID:

EPDNEW_M11774

Type:

initiation region

Name:

Tmem38a_1

Description:

Mus musculus transmembrane protein 38A , transcript variant 1,mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	8	72,572,044 - 72,572,104	EPDNEW

RGD ID:

6843854

Promoter ID:

MM_KWN:54877

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

3T3L1_Day0, 3T3L1_Day3, 3T3L1_Day6, BoneMarrow_2Hour, Brain, ES_Cell, Liver, Spleen

Transcripts:

UC009MGI.1, UC009MGJ.1

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	8	75,095,026 - 75,096,132 (+)	MPROMDB

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:1921416	AgrOrtholog
Ensembl Genes	ENSMUSG00000031791	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein	ENSMUSP00000034244	ENTREZGENE, UniProtKB/Swiss-Prot
	ENSMUSP00000148388	ENTREZGENE, UniProtKB/TrEMBL
	ENSMUSP00000148844	UniProtKB/TrEMBL
Ensembl Transcript	ENSMUST00000034244	ENTREZGENE, UniProtKB/Swiss-Prot
	ENSMUST00000211914	UniProtKB/TrEMBL
	ENSMUST00000212763	ENTREZGENE, UniProtKB/TrEMBL
InterPro	TRIC_channel	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	mmu:74166	UniProtKB/Swiss-Prot
MGD	MGI:1921416	ENTREZGENE
NCBI Gene	74166	ENTREZGENE
PANTHER	PTHR12454	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	TRIC	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Tmem38a	PhenoGen
UniGene	Mm.212927	ENTREZGENE
UniProt	A0A1D5RLJ0_MOUSE	UniProtKB/TrEMBL
	A0A1D5RMM9_MOUSE	UniProtKB/TrEMBL
	Q3TMP8	ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary	A5A6S4	UniProtKB/Swiss-Prot
	A7LBB7	UniProtKB/Swiss-Prot
	Q3TZB9	UniProtKB/Swiss-Prot
	Q91WL2	UniProtKB/Swiss-Prot

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)