Fkbp8 (FK506 binding protein 8) - Rat Genome Database
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Gene: Fkbp8 (FK506 binding protein 8) Mus musculus
Analyze
Symbol: Fkbp8
Name: FK506 binding protein 8
RGD ID: 1318579
MGI Page MGI
Description: Exhibits protein folding chaperone. Involved in several processes, including dorsal/ventral neural tube patterning; positive regulation of BMP signaling pathway; and smoothened signaling pathway. Localizes to integral component of endoplasmic reticulum membrane and mitochondrial envelope. Is expressed in embryo. Used to study clubfoot. Orthologous to human FKBP8 (FKBP prolyl isomerase 8); INTERACTS WITH 1,2-dimethylhydrazine; 2,3,7,8-tetrachlorodibenzodioxine; 3,4-methylenedioxymethamphetamine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 38 kDa FK506-binding protein; 38 kDa FKBP; 38kD; 38kDa; FK506-binding protein 38; FK506-binding protein 8; FKBP-38; FKBP-8; Fkbp3; Fkbp38; FKBPR38; mFKBP38; peptidyl-prolyl cis-trans isomerase FKBP8; PPIase FKBP8; rotamase
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39870,980,371 - 70,987,978 (+)NCBIGRCm39mm39
GRCm38870,527,721 - 70,535,328 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl870,527,724 - 70,535,328 (+)EnsemblGRCm38mm10GRCm38
MGSCv37873,051,642 - 73,059,227 (+)NCBIGRCm37mm9NCBIm37
MGSCv36873,458,516 - 73,464,312 (+)NCBImm8
Celera873,084,164 - 73,091,753 (+)NCBICelera
Cytogenetic Map8B3.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

Additional References at PubMed
PMID:10197430   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12477932   PMID:12510191   PMID:12520002   PMID:14610273   PMID:14612567   PMID:14667822  
PMID:15105374   PMID:15489334   PMID:15782199   PMID:16141072   PMID:16141073   PMID:16783635   PMID:17015433   PMID:17110338   PMID:17573772   PMID:18003640   PMID:18459960   PMID:18590716  
PMID:18614015   PMID:18799693   PMID:19223390   PMID:19546213   PMID:21267068   PMID:22178952   PMID:23024056   PMID:25077969   PMID:27113764   PMID:28378742   PMID:29129702   PMID:29916806  
PMID:31908024   PMID:32325033   PMID:32581705  


Genomics

Comparative Map Data
Fkbp8
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39870,980,371 - 70,987,978 (+)NCBIGRCm39mm39
GRCm38870,527,721 - 70,535,328 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl870,527,724 - 70,535,328 (+)EnsemblGRCm38mm10GRCm38
MGSCv37873,051,642 - 73,059,227 (+)NCBIGRCm37mm9NCBIm37
MGSCv36873,458,516 - 73,464,312 (+)NCBImm8
Celera873,084,164 - 73,091,753 (+)NCBICelera
Cytogenetic Map8B3.3NCBI
FKBP8
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1918,531,751 - 18,544,077 (-)EnsemblGRCh38hg38GRCh38
GRCh381918,531,763 - 18,543,573 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371918,642,568 - 18,654,887 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361918,503,568 - 18,515,383 (-)NCBINCBI36hg18NCBI36
Build 341918,503,567 - 18,515,383NCBI
Celera1918,544,773 - 18,556,588 (-)NCBI
Cytogenetic Map19p13.11NCBI
HuRef1918,205,047 - 18,217,230 (-)NCBIHuRef
CHM1_11918,643,047 - 18,654,886 (-)NCBICHM1_1
Fkbp8
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01620,645,956 - 20,652,890 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1620,645,957 - 20,652,889 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01620,501,665 - 20,508,369 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41619,401,883 - 19,407,192 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11619,401,881 - 19,408,527 (-)NCBI
Celera1619,087,049 - 19,094,012 (-)NCBICelera
Cytogenetic Map16p14NCBI
Fkbp8
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555243,036,953 - 3,044,296 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555243,037,825 - 3,044,296 (+)NCBIChiLan1.0ChiLan1.0
FKBP8
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11918,980,269 - 18,992,170 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1918,980,269 - 18,992,170 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01918,009,505 - 18,021,772 (-)NCBIMhudiblu_PPA_v0panPan3
FKBP8
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl2044,489,219 - 44,598,497 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.12044,494,856 - 44,504,084 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Fkbp8
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049365962,728,089 - 2,735,718 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FKBP8
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl259,252,073 - 59,267,165 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1259,256,546 - 59,267,171 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2259,035,636 - 59,046,247 (-)NCBISscrofa10.2Sscrofa10.2susScr3
FKBP8
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1617,007,764 - 17,018,409 (-)NCBI
ChlSab1.1 Ensembl617,007,390 - 17,017,714 (-)Ensembl
Fkbp8
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046249081,713,590 - 1,720,709 (-)NCBI

Position Markers
RH128354  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38870,535,085 - 70,535,264UniSTSGRCm38
MGSCv37873,058,984 - 73,059,163UniSTSGRCm37
Celera873,091,510 - 73,091,689UniSTS
Cytogenetic Map8C1UniSTS
Fkbp8  
Mouse AssemblyChrPosition (strand)SourceJBrowse
MGSCv37873,053,140 - 73,053,475UniSTSGRCm37
Celera873,085,662 - 73,085,997UniSTS
Cytogenetic Map8C1UniSTS
cM Map8 UniSTS
Fkbp8  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map8C1UniSTS
cM Map8 UniSTS
Fkbp8  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38870,527,996 - 70,529,576UniSTSGRCm38
MGSCv37873,051,895 - 73,053,475UniSTSGRCm37
Celera873,084,417 - 73,085,997UniSTS
Cytogenetic Map8C1UniSTS
Fkbp8  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38870,529,241 - 70,529,576UniSTSGRCm38
MGSCv37873,053,140 - 73,053,475UniSTSGRCm37
Celera873,085,662 - 73,085,997UniSTS
Cytogenetic Map8C1UniSTS
Fkbp8  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map8C1UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1558870Eae36_mexperimental allergic encephalomyelitis susceptibility 36 (mouse)Not determined81472316071045600Mouse
1357811Orq3_movulation rate QTL 3 (mouse)Not determined83201654471287993Mouse
4141437W10q14_mweight 10 weeks QTL 14 (mouse)Not determined3201654471287993Mouse
4141172W6q9_mweight 6 weeks QTL 9 (mouse)Not determined3201654471287993Mouse
4140966Egq12_mearly growth QTL 12 (mouse)Not determined3201654471287993Mouse
4140967Bmd39_mbone mineral density 39 (mouse)Not determined832016544117238700Mouse
1558875Eae31_mexperimental allergic encephalomyelitis susceptibility 31 (mouse)Not determined834642776114837007Mouse
1301013Capsq4_mcapsaicin sensitivity related QTL 4 (mouse)Not determined83616300092728652Mouse
27226754Femd6_mfemur midshaft diameter 6, 10 week (mouse)837400000109600000Mouse
12904744Carcdq1_mcardiac collagen deposition QTL 1 (mouse)83970925694689598Mouse
1301544Iba3_minduction of brown adipocytes 3 (mouse)Not determined84429488078295025Mouse
1301717Adip4_madiposity 4 (mouse)Not determined84763703081637146Mouse
10766453Char11_mP. chabaudi malaria resistance QTL 11 (mouse)84763703081637146Mouse
1301441Skull11_mskull morphology 11 (mouse)Not determined84773713481737254Mouse
1357715Alaa3_malopecia areata 3 (mouse)Not determined84879293982793021Mouse
14746987Manh64_mmandible shape 64 (mouse)85005330684053306Mouse
14747005Mancz7_mmandible centroid size 7 (mouse)85005330684053306Mouse
14700686Civq3_mcerebral infarct volume QTL 3 (mouse)85188219185882191Mouse
1301506Aevm1_mautoimmune extremity vasculitis in MRL mice 1 (mouse)Not determined85428781788287993Mouse
1301952Im3_mimmunoregulatory 3 (mouse)Not determined85470661488706763Mouse
10412287Carg3_mCandida albicans resistance gene 3 (mouse)Not determined85554502889545028Mouse
11353828Gf7_mgonadal fat pad weight 7 (mouse)85820147992201479Mouse
10043975Obq31_mobesity QTL 31 (mouse)Not determined85840977692409776Mouse
1301688Orch6_mautoimmune orchitis resistance 6 (mouse)Not determined86078685094786976Mouse
4141285Tgq18_mtriglyceride QTL 18 (mouse)Not determined6346010797460107Mouse
4141797Skmw16_mskeletal muscle weight 16 (mouse)Not determined86393954797939696Mouse
1357787Vtbt5_mvertebral trabecular bone trait 5 (mouse)Not determined86535776899357920Mouse
10043992Hbnr11_mHeligmosomoides bakeri nematode resistance 11 (mouse)Not determined86560020799600347Mouse
10766466Char12_mP. chabaudi malaria resistance QTL 12 (mouse)86826982782600347Mouse
1301767Fcsa2_mfemoral cross-sectional area 2 (mouse)Not determined870305375104305495Mouse
4142283Imraq2_mimmune response to AAV2 QTL 2 (mouse)Not determined870305375104305495Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2305
Count of miRNA genes:631
Interacting mature miRNAs:793
Transcripts:ENSMUST00000075491, ENSMUST00000119353, ENSMUST00000119425, ENSMUST00000119698, ENSMUST00000123052, ENSMUST00000125741, ENSMUST00000126613, ENSMUST00000128513, ENSMUST00000134299, ENSMUST00000134893, ENSMUST00000144766
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001111066 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001199631 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_010223 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006509556 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017312567 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017312568 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001778406 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003947234 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004934771 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_379034 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB154247 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC157774 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF030635 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK040736 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK088739 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK146122 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK152198 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK153000 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK158155 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK165281 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167663 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK170993 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK177460 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK177591 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK178628 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK179469 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK180952 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK182349 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK184741 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK188492 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK189147 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK189244 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK190318 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK190969 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK192821 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK197324 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK197498 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK205574 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK206245 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK207414 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK208969 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK209719 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK211059 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK212094 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK212129 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK213138 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK214360 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK216136 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK218022 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY187231 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY225340 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY278608 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB842097 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC003739 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC027808 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466569 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DV644627 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000075491   ⟹   ENSMUSP00000074935
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl870,527,747 - 70,535,326 (+)Ensembl
RefSeq Acc Id: ENSMUST00000119353   ⟹   ENSMUSP00000112527
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl870,527,724 - 70,535,328 (+)Ensembl
RefSeq Acc Id: ENSMUST00000119425   ⟹   ENSMUSP00000113528
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl870,528,816 - 70,529,583 (+)Ensembl
RefSeq Acc Id: ENSMUST00000119698   ⟹   ENSMUSP00000114069
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl870,527,846 - 70,535,327 (+)Ensembl
RefSeq Acc Id: ENSMUST00000123052
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl870,531,734 - 70,534,956 (+)Ensembl
RefSeq Acc Id: ENSMUST00000125741
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl870,531,124 - 70,534,171 (+)Ensembl
RefSeq Acc Id: ENSMUST00000126613
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl870,532,184 - 70,534,867 (+)Ensembl
RefSeq Acc Id: ENSMUST00000128513
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl870,528,009 - 70,530,598 (+)Ensembl
RefSeq Acc Id: ENSMUST00000134299
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl870,532,121 - 70,534,971 (+)Ensembl
RefSeq Acc Id: ENSMUST00000134893   ⟹   ENSMUSP00000118843
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl870,534,117 - 70,535,057 (+)Ensembl
RefSeq Acc Id: ENSMUST00000144766
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl870,527,762 - 70,532,453 (+)Ensembl
RefSeq Acc Id: NM_001111066   ⟹   NP_001104536
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39870,980,393 - 70,987,978 (+)NCBI
GRCm38870,527,743 - 70,535,328 (+)NCBI
MGSCv37873,051,642 - 73,059,227 (+)RGD
Celera873,084,164 - 73,091,753 (+)RGD
cM Map8 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001199631   ⟹   NP_001186560
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39870,980,496 - 70,987,978 (+)NCBI
GRCm38870,527,846 - 70,535,328 (+)NCBI
Celera873,084,164 - 73,091,753 (+)ENTREZGENE
cM Map8 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_010223   ⟹   NP_034353
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39870,980,393 - 70,987,978 (+)NCBI
GRCm38870,527,743 - 70,535,328 (+)NCBI
MGSCv37873,051,642 - 73,059,227 (+)RGD
Celera873,084,164 - 73,091,753 (+)RGD
cM Map8 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006509556   ⟹   XP_006509619
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39870,980,677 - 70,987,978 (+)NCBI
GRCm38870,528,030 - 70,535,328 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017312567   ⟹   XP_017168056
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39870,980,428 - 70,987,978 (+)NCBI
GRCm38870,527,784 - 70,535,328 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017312568   ⟹   XP_017168057
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39870,980,679 - 70,987,978 (+)NCBI
GRCm38870,528,029 - 70,535,328 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001778406
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39870,980,371 - 70,987,978 (+)NCBI
GRCm38870,527,721 - 70,535,328 (+)NCBI
Sequence:
RefSeq Acc Id: XR_003947234
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39870,980,428 - 70,987,978 (+)NCBI
GRCm38870,527,784 - 70,535,328 (+)NCBI
Sequence:
RefSeq Acc Id: XR_004934771
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39870,980,428 - 70,987,978 (+)NCBI
RefSeq Acc Id: XR_379034
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39870,980,371 - 70,987,978 (+)NCBI
GRCm38870,527,721 - 70,535,328 (+)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_034353   ⟸   NM_010223
- Peptide Label: isoform b
- UniProtKB: O35465 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001104536   ⟸   NM_001111066
- Peptide Label: isoform a
- UniProtKB: O35465 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001186560   ⟸   NM_001199631
- Peptide Label: isoform a
- UniProtKB: O35465 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006509619   ⟸   XM_006509556
- Peptide Label: isoform X1
- UniProtKB: O35465 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_017168056   ⟸   XM_017312567
- Peptide Label: isoform X2
- UniProtKB: O35465 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_017168057   ⟸   XM_017312568
- Peptide Label: isoform X2
- UniProtKB: O35465 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000112527   ⟸   ENSMUST00000119353
RefSeq Acc Id: ENSMUSP00000113528   ⟸   ENSMUST00000119425
RefSeq Acc Id: ENSMUSP00000114069   ⟸   ENSMUST00000119698
RefSeq Acc Id: ENSMUSP00000118843   ⟸   ENSMUST00000134893
RefSeq Acc Id: ENSMUSP00000074935   ⟸   ENSMUST00000075491
Protein Domains
PPIase FKBP-type   TPR_REGION

Promoters
RGD ID:8667321
Promoter ID:EPDNEW_M11691
Type:multiple initiation site
Name:Fkbp8_1
Description:Mus musculus FK506 binding protein 8 , transcript variant 3,mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38870,527,751 - 70,527,811EPDNEW
RGD ID:6843702
Promoter ID:MM_KWN:54716
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000119698,   NM_001111066,   OTTMUST00000077187,   OTTMUST00000077191,   UC009MAO.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36873,051,381 - 73,051,882 (+)MPROMDB
RGD ID:6843162
Promoter ID:MM_KWN:54717
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Liver,   Lung,   MEF_B4,   MEF_B6
Transcripts:ENSMUST00000119425,   UC009MAT.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36873,051,971 - 73,053,572 (+)MPROMDB
RGD ID:6843164
Promoter ID:MM_KWN:54718
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Kidney,   Liver,   Lung
Transcripts:OTTMUST00000077193,   OTTMUST00000077194,   OTTMUST00000077195,   OTTMUST00000077196
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36873,054,931 - 73,056,582 (+)MPROMDB
RGD ID:6843165
Promoter ID:MM_KWN:54719
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_4Hour,   Brain
Transcripts:OTTMUST00000077197
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36873,057,221 - 73,058,432 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1341070 AgrOrtholog
Ensembl Genes ENSMUSG00000019428 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000074935 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000112527 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000113528 UniProtKB/TrEMBL
  ENSMUSP00000114069 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000118843 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000075491 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000119353 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000119425 UniProtKB/TrEMBL
  ENSMUST00000119698 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000134893 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro PPIase_FKBP_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TPR-contain_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TPR-like_helical_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TPR_repeat UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:14232 UniProtKB/Swiss-Prot
MGD MGI:1341070 ENTREZGENE
NCBI Gene 14232 ENTREZGENE
Pfam FKBP_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Fkbp8 PhenoGen
PROSITE FKBP_PPIASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TPR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TPR_REGION UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART TPR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF48452 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniGene Mm.141864 ENTREZGENE
UniProt C9K0Z7_MOUSE UniProtKB/TrEMBL
  D3Z597_MOUSE UniProtKB/TrEMBL
  F6WP10_MOUSE UniProtKB/TrEMBL
  FKBP8_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
UniProt Secondary Q3UK86 UniProtKB/Swiss-Prot
  Q6GTX9 UniProtKB/Swiss-Prot
  Q811M7 UniProtKB/Swiss-Prot
  Q811R4 UniProtKB/Swiss-Prot
  Q8C2F0 UniProtKB/Swiss-Prot
  Q99L93 UniProtKB/Swiss-Prot