Gm7328 (predicted gene 7328) - Rat Genome Database

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Gene: Gm7328 (predicted gene 7328) Mus musculus
Analyze
Symbol: Gm7328
Name: predicted gene 7328
RGD ID: 2294647
MGI Page MGI
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Previously known as: EG654355
Related Functional Gene: Grin2a  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39857,405,863 - 57,408,506 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl857,405,864 - 57,408,088 (+)EnsemblGRCm39 Ensembl
GRCm38856,952,828 - 56,955,471 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl856,952,829 - 56,955,053 (+)EnsemblGRCm38mm10GRCm38
MGSCv37859,431,525 - 59,434,068 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36859,844,970 - 59,847,313 (+)NCBIMGSCv36mm8
Celera859,603,252 - 59,605,795 (+)NCBICelera
Cytogenetic Map8B2NCBI
cM Map829.7NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Gm7328
109 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301139Lmr10_mleishmaniasis resistance 10 (mouse)Not determined83532109757797633Mouse
1558870Eae36_mexperimental allergic encephalomyelitis susceptibility 36 (mouse)Not determined81477316071498244Mouse
11049577Lmr10b_mleishmaniasis resistance 10b (mouse)83532109757797633Mouse
4141437W10q14_mweight 10 weeks QTL 14 (mouse)Not determined3250657271740637Mouse
11049578Lmr10c_mleishmaniasis resistance 10c (mouse)83532109757797633Mouse
11041902Lmr10a_mleishmaniasis resistance 10a (mouse)83532109757797633Mouse
1301013Capsq4_mcapsaicin sensitivity related QTL 4 (mouse)Not determined83663015493455280Mouse
1301717Adip4_madiposity 4 (mouse)Not determined84809006482090180Mouse
1357715Alaa3_malopecia areata 3 (mouse)Not determined84924559183245673Mouse
14746987Manh64_mmandible shape 64 (mouse)85050595884505958Mouse
4141172W6q9_mweight 6 weeks QTL 9 (mouse)Not determined3250657271740637Mouse
1558875Eae31_mexperimental allergic encephalomyelitis susceptibility 31 (mouse)Not determined835109930115563747Mouse
10766453Char11_mP. chabaudi malaria resistance QTL 11 (mouse)84809006482090180Mouse
1301506Aevm1_mautoimmune extremity vasculitis in MRL mice 1 (mouse)Not determined85474046188740637Mouse
1301441Skull11_mskull morphology 11 (mouse)Not determined84819016882190288Mouse
1301952Im3_mimmunoregulatory 3 (mouse)Not determined85515925889159407Mouse
4140967Bmd39_mbone mineral density 39 (mouse)Not determined832506572117965439Mouse
4140966Egq12_mearly growth QTL 12 (mouse)Not determined3250657271740637Mouse
14747005Mancz7_mmandible centroid size 7 (mouse)85050595884505958Mouse
27226754Femd6_mfemur midshaft diameter 6, 10 week (mouse)837867154110326632Mouse
10043974Obq30_mobesity QTL 30 (mouse)Not determined82658332260583322Mouse
10412287Carg3_mCandida albicans resistance gene 3 (mouse)Not determined85629887290298872Mouse
1301936Trigq2_mtriglyceride QTL 2 (mouse)Not determined83429039768290537Mouse
1357811Orq3_movulation rate QTL 3 (mouse)Not determined83250657271740637Mouse
12904744Carcdq1_mcardiac collagen deposition QTL 1 (mouse)84016229795416226Mouse
14700686Civq3_mcerebral infarct volume QTL 3 (mouse)85233484386334843Mouse
1301544Iba3_minduction of brown adipocytes 3 (mouse)Not determined84474791478748059Mouse

Markers in Region
Grin2a  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38169,578,960 - 9,579,358UniSTSGRCm38
GRCm38856,953,523 - 56,953,921UniSTSGRCm38
MGSCv37169,577,958 - 9,578,182UniSTSGRCm37
MGSCv37859,433,589 - 59,433,813UniSTSGRCm37
Celera859,604,047 - 59,604,445UniSTS
Cytogenetic Map16A1UniSTS
Cytogenetic Map8B2UniSTS
cM Map163.4UniSTS
cM Map163.4UniSTS
Grin2a  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38856,954,792 - 56,955,016UniSTSGRCm38
GRCm38169,577,865 - 9,578,089UniSTSGRCm38
MGSCv37859,433,589 - 59,433,813UniSTSGRCm37
MGSCv37169,577,958 - 9,578,182UniSTSGRCm37
Celera859,605,316 - 59,605,540UniSTS
Cytogenetic Map8B2UniSTS
Cytogenetic Map16A1UniSTS
cM Map163.4UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NG_005382 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC116413 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000211123
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl857,405,864 - 57,408,088 (+)Ensembl
GRCm38.p6 Ensembl856,952,829 - 56,955,053 (+)Ensembl

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000110043 Ensembl, ENTREZGENE
MGD MGI:3644705 ENTREZGENE
NCBI Gene 654355 ENTREZGENE
PhenoGen Gm7328 PhenoGen