Prmt9 (protein arginine methyltransferase 9) - Rat Genome Database
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Gene: Prmt9 (protein arginine methyltransferase 9) Mus musculus
Analyze
Symbol: Prmt9
Name: protein arginine methyltransferase 9
RGD ID: 1314612
MGI Page MGI
Description: Predicted to have protein-arginine omega-N monomethyltransferase activity and protein-arginine omega-N symmetric methyltransferase activity. Predicted to be involved in mRNA processing. Predicted to localize to cytoplasm. Orthologous to human PRMT9 (protein arginine methyltransferase 9); INTERACTS WITH aflatoxin B1; cocaine; 2-hydroxypropanoic acid (ortholog).
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: AI931714; Prmt; Prmt10; putative protein arginine N-methyltransferase 10; putative protein arginine N-methyltransferase 9
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39878,276,015 - 78,307,967 (+)NCBIGRCm39mm39
GRCm38877,549,388 - 77,581,338 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl877,549,397 - 77,581,338 (+)EnsemblGRCm38mm10GRCm38
MGSCv37880,073,296 - 80,105,237 (+)NCBIGRCm37mm9NCBIm37
MGSCv36880,445,469 - 80,480,387 (+)NCBImm8
Celera881,840,756 - 81,872,252 (+)NCBICelera
Cytogenetic Map8C1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (ISO)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
1. MGD data from the GO Consortium
2. RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:14610273   PMID:15782199   PMID:16141072   PMID:16141073   PMID:21267068   PMID:21873635   PMID:24183668  


Genomics

Comparative Map Data
Prmt9
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39878,276,015 - 78,307,967 (+)NCBIGRCm39mm39
GRCm38877,549,388 - 77,581,338 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl877,549,397 - 77,581,338 (+)EnsemblGRCm38mm10GRCm38
MGSCv37880,073,296 - 80,105,237 (+)NCBIGRCm37mm9NCBIm37
MGSCv36880,445,469 - 80,480,387 (+)NCBImm8
Celera881,840,756 - 81,872,252 (+)NCBICelera
Cytogenetic Map8C1NCBI
PRMT9
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl4147,637,785 - 147,684,163 (-)EnsemblGRCh38hg38GRCh38
GRCh384147,635,650 - 147,684,163 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh374148,558,936 - 148,605,381 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 364148,778,983 - 148,824,730 (-)NCBINCBI36hg18NCBI36
Celera4145,880,642 - 145,926,389 (-)NCBI
Cytogenetic Map4q31.23NCBI
HuRef4144,286,651 - 144,332,385 (-)NCBIHuRef
CHM1_14148,537,348 - 148,583,775 (-)NCBICHM1_1
Prmt9
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01934,067,008 - 34,105,626 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1934,070,632 - 34,105,610 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01944,948,450 - 44,987,030 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41932,192,864 - 32,227,363 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11932,197,748 - 32,266,698 (-)NCBI
Celera1929,861,593 - 29,895,884 (-)NCBICelera
Cytogenetic Map19q11NCBI
Prmt9
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554283,215,335 - 3,243,569 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554283,215,335 - 3,243,569 (-)NCBIChiLan1.0ChiLan1.0
PRMT9
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.14151,631,498 - 151,677,866 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl4151,631,498 - 151,677,866 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v04139,976,090 - 140,022,757 (-)NCBIMhudiblu_PPA_v0panPan3
PRMT9
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl1545,955,356 - 46,022,854 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.11545,981,568 - 46,023,026 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Prmt9
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049365351,811,376 - 1,855,636 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PRMT9
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl881,072,565 - 81,114,580 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1881,076,709 - 81,113,545 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2886,168,459 - 86,191,871 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PRMT9
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1 Ensembl794,137,041 - 94,181,627 (-)Ensembl
ChlSab1.1794,136,300 - 94,181,668 (-)NCBI
Prmt9
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004625006193,626 - 229,414 (+)NCBI

Position Markers
AI931714  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38877,581,212 - 77,581,291UniSTSGRCm38
MGSCv37880,105,111 - 80,105,190UniSTSGRCm37
Celera881,872,126 - 81,872,205UniSTS
Cytogenetic Map8C1UniSTS
Whitehead/MRC_RH8822.64UniSTS
D10Mit157.2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map6D1UniSTS
Cytogenetic Map16B4UniSTS
Cytogenetic Map18E2UniSTS
Cytogenetic Map4C3UniSTS
Cytogenetic Map7B2UniSTS
Cytogenetic Map4D2.3UniSTS
Cytogenetic Map11E1UniSTS
Cytogenetic Map14E2.2UniSTS
Cytogenetic Map4C7UniSTS
Cytogenetic Map2H4UniSTS
Cytogenetic Map1FUniSTS
Cytogenetic Map6C3UniSTS
Cytogenetic Map11DUniSTS
Cytogenetic Map3G2UniSTS
Cytogenetic Map17A1UniSTS
Cytogenetic Map9F2UniSTS
Cytogenetic Map12F1UniSTS
Cytogenetic Map19C2UniSTS
Cytogenetic Map3BUniSTS
Cytogenetic Map8C1UniSTS
Cytogenetic Map18A2UniSTS
Cytogenetic Map3F2UniSTS
Cytogenetic Map14C3UniSTS
Cytogenetic Map8E1UniSTS
Cytogenetic Map8E2UniSTS
Cytogenetic Map5B1UniSTS
Cytogenetic Map18B1UniSTS
Cytogenetic Map9CUniSTS
Cytogenetic Map14C2UniSTS
Cytogenetic Map6A1UniSTS
Cytogenetic Map10B4UniSTS
Cytogenetic Map13D2.1UniSTS
Cytogenetic Map5E5UniSTS
Cytogenetic Map11B1.3UniSTS
Cytogenetic Map4D1UniSTS
Cytogenetic Map9A5.2UniSTS
Cytogenetic Map3F1UniSTS
Cytogenetic Map17E3UniSTS
Cytogenetic Map11B3UniSTS
Cytogenetic Map1H4UniSTS
Cytogenetic Map6A3UniSTS
Cytogenetic Map5E4-E5UniSTS
Cytogenetic Map15E1UniSTS
Cytogenetic Map13DUniSTS
Cytogenetic Map14BUniSTS
Cytogenetic Map14D1UniSTS
Cytogenetic Map7B4UniSTS
Cytogenetic Map8D3UniSTS
Cytogenetic MapXDUniSTS
Cytogenetic Map17A3.3UniSTS
Cytogenetic Map7E2UniSTS
Cytogenetic Map1H2.3UniSTS
Cytogenetic Map7A2UniSTS
Cytogenetic Map7F3UniSTS
Cytogenetic Map9F1UniSTS
Cytogenetic Map10C1UniSTS
Cytogenetic Map4E2UniSTS
Cytogenetic Map16A1UniSTS
Cytogenetic Map8B3.3UniSTS
Cytogenetic Map8D2UniSTS
Cytogenetic Map3DUniSTS
Cytogenetic Map15D2UniSTS
Cytogenetic Map17B1UniSTS
Cytogenetic Map7A3UniSTS
Cytogenetic Map15F1UniSTS
Cytogenetic Map16B2UniSTS
Cytogenetic Map7CUniSTS
Cytogenetic Map3F2.1UniSTS
Cytogenetic Map6F3UniSTS
Cytogenetic Map1C4UniSTS
Cytogenetic Map11E2UniSTS
Cytogenetic Map11B5UniSTS
Cytogenetic Map9F3UniSTS
Cytogenetic Map2BUniSTS
Cytogenetic Map13B3UniSTS
Cytogenetic Map9A4UniSTS
Cytogenetic Map5A3UniSTS
Cytogenetic Map2H1UniSTS
Cytogenetic Map16B1UniSTS
Cytogenetic Map1A5UniSTS
Cytogenetic Map11CUniSTS
Cytogenetic Map9E1UniSTS
Cytogenetic Map6G1UniSTS
Cytogenetic MapXA2UniSTS
Cytogenetic Map13B1UniSTS
Cytogenetic Map5E2UniSTS
Cytogenetic Map12C1UniSTS
Cytogenetic Map5FUniSTS
Cytogenetic Map4D3UniSTS
Cytogenetic Map10C2UniSTS
Cytogenetic Map9BUniSTS
Cytogenetic Map5G2UniSTS
Cytogenetic Map7F1UniSTS
Cytogenetic Map12C3UniSTS
Cytogenetic Map10A4UniSTS
Cytogenetic Map8A2UniSTS
Cytogenetic Map18A1UniSTS
Cytogenetic Map12A1.1UniSTS
Cytogenetic Map1C2UniSTS
Cytogenetic Map11B2UniSTS
Cytogenetic Map6E3UniSTS
Cytogenetic Map5C3.3UniSTS
Cytogenetic Map1BUniSTS
Cytogenetic Map17A3.1UniSTS
Cytogenetic Map7A1UniSTS
Cytogenetic Map2E5UniSTS
Cytogenetic Map11A1UniSTS
Cytogenetic Map4B1UniSTS
Cytogenetic Map15A2UniSTS
Cytogenetic Map8C3UniSTS
Cytogenetic Map2A3UniSTS
Cytogenetic Map5G3UniSTS
Cytogenetic Map4A3UniSTS
Cytogenetic Map2H3UniSTS
Cytogenetic Map8A1UniSTS
Cytogenetic Map8A1.1UniSTS
Cytogenetic Map16A3UniSTS
Cytogenetic Map10B1UniSTS
Cytogenetic Map19AUniSTS
Cytogenetic Map10A1UniSTS
Cytogenetic Map13D1UniSTS
Cytogenetic Map4A1UniSTS
Cytogenetic Map9A3UniSTS
Cytogenetic Map17CUniSTS
Cytogenetic Map1DUniSTS
Cytogenetic Map5E3UniSTS
Cytogenetic Map15D3UniSTS
Cytogenetic Map2H2UniSTS
Cytogenetic Map7D3UniSTS
Cytogenetic Map2A1UniSTS
Cytogenetic Map14C1UniSTS
Cytogenetic Map14E5UniSTS
Cytogenetic Map10CUniSTS
Cytogenetic Map18B2UniSTS
Cytogenetic Map2F1UniSTS
Cytogenetic Map10D3UniSTS
Cytogenetic Map17A2UniSTS
Cytogenetic Map2C3UniSTS
Cytogenetic Map1C3UniSTS
Cytogenetic Map17B2UniSTS
Cytogenetic Map5B2UniSTS
Cytogenetic Map5G1UniSTS
Cytogenetic Map4C6UniSTS
Cytogenetic Map13C3UniSTS
Cytogenetic Map2E1UniSTS
Cytogenetic Map17A3.2-A3.3UniSTS
Cytogenetic Map19C3UniSTS
Cytogenetic Map7E3UniSTS
Cytogenetic Map13C1UniSTS
Cytogenetic Map9E3.1UniSTS
Cytogenetic Map15E3UniSTS
Cytogenetic Map6B1UniSTS
Cytogenetic MapXE3UniSTS
Cytogenetic Map4C4UniSTS
Cytogenetic Map3E3UniSTS
Cytogenetic Map11A4UniSTS
Cytogenetic Map4C5UniSTS
Cytogenetic Map18B3UniSTS
Cytogenetic Map9A2UniSTS
Cytogenetic Map7E1UniSTS
Cytogenetic Map5D-E1UniSTS
Cytogenetic Map5B3UniSTS
Cytogenetic Map13A2-A3UniSTS
Cytogenetic Map5A2UniSTS
Cytogenetic Map4B3UniSTS
Cytogenetic Map1E4UniSTS
Cytogenetic Map17E4UniSTS
Cytogenetic Map1G2UniSTS
Cytogenetic Map15B3.1UniSTS
Cytogenetic Map12EUniSTS
Cytogenetic MapXA5UniSTS
Cytogenetic Map6A3.3UniSTS
Cytogenetic Map6G3UniSTS
Cytogenetic Map6F2UniSTS
Cytogenetic Map5C1UniSTS
Cytogenetic Map4D2.1UniSTS
Cytogenetic Map4A5UniSTS
Cytogenetic Map3F2.2UniSTS
Cytogenetic Map1E3-E4UniSTS
Cytogenetic Map9F1-F3UniSTS
Cytogenetic Map1C1.1UniSTS
Cytogenetic Map14D2UniSTS
Cytogenetic Map12A2UniSTS
Cytogenetic Map17A3-BUniSTS
Cytogenetic Map7F5UniSTS
Cytogenetic Map14A3UniSTS
Cytogenetic Map5G1.1UniSTS
Cytogenetic MapXF2-F4UniSTS
Cytogenetic Map7D2UniSTS
Cytogenetic Map2F3UniSTS
Cytogenetic Map10A3UniSTS
Cytogenetic MapXA7.3UniSTS
Cytogenetic Map9F1-F2UniSTS
Cytogenetic Map13A3.2UniSTS
Cytogenetic Map10A2UniSTS
Cytogenetic Map1C1UniSTS
Cytogenetic Map1A1UniSTS
Cytogenetic Map12D3UniSTS
Cytogenetic Map1A3-A5UniSTS
Cytogenetic Map2A2UniSTS
Cytogenetic Map3A1UniSTS
Cytogenetic MapXA3.3UniSTS
Cytogenetic Map16A-B1UniSTS
Cytogenetic Map1D2.3UniSTS
Cytogenetic Map6B2.3UniSTS
Cytogenetic Map2G3UniSTS
Cytogenetic MapXA2-A3.1UniSTS
Cytogenetic Map9A5.3UniSTS
Cytogenetic Map14A2-BUniSTS
Cytogenetic Map8E1-E2UniSTS
Cytogenetic Map8A3UniSTS
Cytogenetic Map1G3-H1UniSTS
Cytogenetic Map8B3-C1UniSTS
Cytogenetic Map19C1UniSTS
Cytogenetic Map8C5UniSTS
Cytogenetic Map8A4UniSTS
Cytogenetic Map15F3UniSTS
Cytogenetic Map14E4UniSTS
Cytogenetic Map4D2.2UniSTS
Cytogenetic MapXF5UniSTS
cM Map1040.0UniSTS
Whitehead Genetic1033.9UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4140967Bmd39_mbone mineral density 39 (mouse)Not determined832016544117238700Mouse
1558875Eae31_mexperimental allergic encephalomyelitis susceptibility 31 (mouse)Not determined834642776114837007Mouse
1301013Capsq4_mcapsaicin sensitivity related QTL 4 (mouse)Not determined83616300092728652Mouse
27226754Femd6_mfemur midshaft diameter 6, 10 week (mouse)837400000109600000Mouse
12904744Carcdq1_mcardiac collagen deposition QTL 1 (mouse)83970925694689598Mouse
1301544Iba3_minduction of brown adipocytes 3 (mouse)Not determined84429488078295025Mouse
1301717Adip4_madiposity 4 (mouse)Not determined84763703081637146Mouse
10766453Char11_mP. chabaudi malaria resistance QTL 11 (mouse)84763703081637146Mouse
1301441Skull11_mskull morphology 11 (mouse)Not determined84773713481737254Mouse
1357715Alaa3_malopecia areata 3 (mouse)Not determined84879293982793021Mouse
14746987Manh64_mmandible shape 64 (mouse)85005330684053306Mouse
14747005Mancz7_mmandible centroid size 7 (mouse)85005330684053306Mouse
14700686Civq3_mcerebral infarct volume QTL 3 (mouse)85188219185882191Mouse
1301506Aevm1_mautoimmune extremity vasculitis in MRL mice 1 (mouse)Not determined85428781788287993Mouse
1301952Im3_mimmunoregulatory 3 (mouse)Not determined85470661488706763Mouse
10412287Carg3_mCandida albicans resistance gene 3 (mouse)Not determined85554502889545028Mouse
11353828Gf7_mgonadal fat pad weight 7 (mouse)85820147992201479Mouse
10043975Obq31_mobesity QTL 31 (mouse)Not determined85840977692409776Mouse
1301688Orch6_mautoimmune orchitis resistance 6 (mouse)Not determined86078685094786976Mouse
4141285Tgq18_mtriglyceride QTL 18 (mouse)Not determined6346010797460107Mouse
4141797Skmw16_mskeletal muscle weight 16 (mouse)Not determined86393954797939696Mouse
1357787Vtbt5_mvertebral trabecular bone trait 5 (mouse)Not determined86535776899357920Mouse
10043992Hbnr11_mHeligmosomoides bakeri nematode resistance 11 (mouse)Not determined86560020799600347Mouse
10766466Char12_mP. chabaudi malaria resistance QTL 12 (mouse)86826982782600347Mouse
1301767Fcsa2_mfemoral cross-sectional area 2 (mouse)Not determined870305375104305495Mouse
4142283Imraq2_mimmune response to AAV2 QTL 2 (mouse)Not determined870305375104305495Mouse
1558780Idd22_minsulin dependent diabetes susceptibility 22 (mouse)Not determined871102903105103009Mouse
4141395Char2a_mP. chabaudi malaria resistance QTL 2a (mouse)Not determined7113678390202598Mouse
4142023W3q5_mweight 3 weeks QTL 5 (mouse)Not determined71287817123895615Mouse
1357708Orq1_movulation rate QTL 1 (mouse)Not determined871287817123895615Mouse
1301872Cd4ts3_mCD4 T cell subset 3 (mouse)Not determined871396181105396393Mouse
1300920Pitm3_mprion incubation time 3 (mouse)Not determined873202495107202598Mouse
27095912Pglq14_mpelvic girdle length QTL 14, 16 week (mouse)873400000126100000Mouse
1558890Lith18_mlithogenic gene 18 (mouse)Not determined875675517109675623Mouse
1357470Obq16_mobesity QTL 16 (mouse)Not determined875685348109685497Mouse
1301808Nhdlq1_mnon-HDL QTL 1 (mouse)Not determined875685348109685497Mouse
1301874Hdlq16_mHDL QTL 16 (mouse)Not determined875685348109685497Mouse
10412234Nhdlq14_mnon-HDL QTL 14 (mouse)Not determined875685348109685497Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:321
Count of miRNA genes:206
Interacting mature miRNAs:223
Transcripts:ENSMUST00000056237, ENSMUST00000118622, ENSMUST00000142824, ENSMUST00000156753
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001081240 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001363465 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243216 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036153707 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004934743 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC109139 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC113049 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK045296 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK045315 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK154546 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK161023 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK194350 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK205080 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK209748 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK217115 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY336855 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466525 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ075954 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000056237   ⟹   ENSMUSP00000050181
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl877,549,397 - 77,581,338 (+)Ensembl
RefSeq Acc Id: ENSMUST00000118622   ⟹   ENSMUSP00000112692
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl877,549,410 - 77,581,338 (+)Ensembl
RefSeq Acc Id: ENSMUST00000142824
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl877,549,407 - 77,563,978 (+)Ensembl
RefSeq Acc Id: ENSMUST00000156753
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl877,563,662 - 77,565,093 (+)Ensembl
RefSeq Acc Id: ENSMUST00000210040   ⟹   ENSMUSP00000148193
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl877,549,454 - 77,581,337 (+)Ensembl
RefSeq Acc Id: NM_001081240   ⟹   NP_001074709
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39878,276,026 - 78,307,967 (+)NCBI
GRCm38877,549,397 - 77,581,338 (+)NCBI
MGSCv37880,073,296 - 80,105,237 (+)RGD
Celera881,840,756 - 81,872,252 (+)RGD
cM Map8 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001363465   ⟹   NP_001350394
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39878,276,026 - 78,307,967 (+)NCBI
GRCm38877,549,397 - 77,581,338 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030243216   ⟹   XP_030099076
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39878,276,018 - 78,307,966 (+)NCBI
GRCm38877,549,388 - 77,581,336 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036153707   ⟹   XP_036009600
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39878,289,163 - 78,307,966 (+)NCBI
RefSeq Acc Id: XR_004934743
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39878,276,015 - 78,307,966 (+)NCBI
Reference Sequences
RefSeq Acc Id: NP_001074709   ⟸   NM_001081240
- Peptide Label: isoform 1
- UniProtKB: Q3U3W5 (UniProtKB/Swiss-Prot),   F8WIU7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030099076   ⟸   XM_030243216
- Peptide Label: isoform X1
RefSeq Acc Id: NP_001350394   ⟸   NM_001363465
- Peptide Label: isoform 2
RefSeq Acc Id: ENSMUSP00000112692   ⟸   ENSMUST00000118622
RefSeq Acc Id: ENSMUSP00000148193   ⟸   ENSMUST00000210040
RefSeq Acc Id: ENSMUSP00000050181   ⟸   ENSMUST00000056237
RefSeq Acc Id: XP_036009600   ⟸   XM_036153707
- Peptide Label: isoform X1
Protein Domains
SAM-dependent MTase PRMT-type   TPR_REGION

Promoters
RGD ID:8667519
Promoter ID:EPDNEW_M11791
Type:initiation region
Name:Prmt9_1
Description:Mus musculus protein arginine methyltransferase 9 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38877,549,455 - 77,549,515EPDNEW
RGD ID:6842717
Promoter ID:MM_KWN:54920
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000118622,   NM_001081240,   UC009MHP.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36880,073,026 - 80,073,526 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2142651 AgrOrtholog
Ensembl Genes ENSMUSG00000037134 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000050181 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000112692 UniProtKB/Swiss-Prot
  ENSMUSP00000148193 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000056237 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000118622 UniProtKB/Swiss-Prot
  ENSMUST00000210040 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Arg_MeTrfase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SAM-dependent_MTases UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TPR-contain_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TPR-like_helical_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TPR_repeat UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:102182 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:2142651 ENTREZGENE
NCBI Gene 102182 ENTREZGENE
PhenoGen Prmt9 PhenoGen
PROSITE SAM_MT_PRMT UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TPR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TPR_REGION UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF48452 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF53335 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniGene Mm.197630 ENTREZGENE
UniProt A0A1B0GT44_MOUSE UniProtKB/TrEMBL
  ANM9_MOUSE UniProtKB/Swiss-Prot
  F8WIU7 ENTREZGENE, UniProtKB/TrEMBL
  Q3U3W5 ENTREZGENE
UniProt Secondary D3YU52 UniProtKB/Swiss-Prot
  Q8BLF8 UniProtKB/Swiss-Prot
  Q8BLG1 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-02-02 Prmt9  protein arginine methyltransferase 9  Prmt10  protein arginine methyltransferase 10 (putative)  Symbol and/or name change 5135510 APPROVED