Tcf7l2 (transcription factor 7 like 2, T cell specific, HMG box) - Rat Genome Database
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Gene: Tcf7l2 (transcription factor 7 like 2, T cell specific, HMG box) Mus musculus
Analyze
Symbol: Tcf7l2
Name: transcription factor 7 like 2, T cell specific, HMG box
RGD ID: 1317787
MGI Page MGI
Description: Is expressed in several structures, including alimentary system; brain; genitourinary system; limb; and skin. Human ortholog(s) of this gene implicated in colorectal cancer; diabetes mellitus (multiple); pancreatic cancer; and prostate cancer. Orthologous to human TCF7L2 (transcription factor 7 like 2); PARTICIPATES IN altered Wnt signaling, canonical pathway; pancreatic cancer pathway; acute myeloid leukemia pathway; INTERACTS WITH 1,2-dichloroethane; 1,2-dimethylhydrazine; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: HMG box transcription factor 4; HMG box transcription factor TCF7L2; mTCF-4; mTcf-4B; mTcf-4E; T-cell factor 4; T-cell-specific transcription factor 4; Tcf-4; Tcf4; TCF4B; TCF4E; transcription factor 7-like 2; transcription factor 7-like 2, T-cell specific, HMG-box
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
NCBI Annotation Information: Note: Tcf4 (GeneID: 21413) and Tcf7l2 (GeneID: 21416) loci share the Tcf4 symbol/alias in common. Tcf4 is a widely used alternative name for T-cell-specific transcription factor 4 (Tcf7l2) conflicting with the official symbol for transcription factor 4 (Tcf4). [26 Jun 2008]
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391955,730,226 - 55,922,091 (+)NCBIGRCm39mm39
GRCm39 Ensembl1955,730,252 - 55,922,086 (+)Ensembl
GRCm381955,741,797 - 55,933,659 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1955,741,820 - 55,933,654 (+)EnsemblGRCm38mm10GRCm38
MGSCv371955,816,300 - 56,008,145 (+)NCBIGRCm37mm9NCBIm37
MGSCv361955,795,518 - 55,986,492 (+)NCBImm8
Celera1957,933,629 - 58,125,906 (+)NCBICelera
Cytogenetic Map19D2NCBI
cM Map1951.59NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dichloroethane  (EXP)
1,2-dimethylhydrazine  (EXP)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-hydroxypropanoic acid  (ISO)
3,4-methylenedioxymethamphetamine  (EXP)
4,4'-sulfonyldiphenol  (EXP)
4-hydroxyphenyl retinamide  (EXP)
5-fluorouracil  (EXP,ISO)
acrolein  (ISO)
afimoxifene  (ISO)
aflatoxin B1  (ISO)
aflatoxin B2  (ISO)
AH23848  (ISO)
all-trans-retinoic acid  (ISO)
alpha-pinene  (ISO)
antirheumatic drug  (ISO)
arsenous acid  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
benzo[b]fluoranthene  (EXP)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP)
bortezomib  (ISO)
buta-1,3-diene  (EXP)
capecitabine  (ISO)
carbamazepine  (ISO)
carbon nanotube  (EXP)
choline  (EXP)
chrysene  (EXP)
cisplatin  (ISO)
clofibrate  (EXP)
cobalt dichloride  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
crocidolite asbestos  (EXP)
curcumin  (ISO)
diarsenic trioxide  (ISO)
diclofenac  (ISO)
dicrotophos  (ISO)
dorsomorphin  (ISO)
doxorubicin  (EXP)
elemental selenium  (ISO)
folic acid  (EXP)
formaldehyde  (ISO)
furan  (ISO)
geraniol  (ISO)
indometacin  (ISO)
irinotecan  (ISO)
L-methionine  (EXP)
leflunomide  (ISO)
lithium chloride  (EXP)
menadione  (ISO)
methapyrilene  (ISO)
N,N-dimethylaniline  (ISO)
N-methyl-4-phenylpyridinium  (EXP,ISO)
nickel atom  (ISO)
oxaliplatin  (ISO)
ozone  (ISO)
paracetamol  (EXP,ISO)
phenobarbital  (EXP)
pirinixic acid  (EXP)
protein kinase inhibitor  (ISO)
quercetin  (ISO)
rac-lactic acid  (ISO)
resveratrol  (ISO)
rotenone  (ISO)
SB 431542  (ISO)
selenium atom  (ISO)
silver atom  (EXP)
silver(0)  (EXP)
sodium arsenite  (ISO)
sodium dodecyl sulfate  (ISO)
testosterone  (ISO)
tetraphene  (EXP)
toluene  (ISO)
topotecan  (ISO)
trichostatin A  (ISO)
triphenyl phosphate  (ISO)
valproic acid  (ISO)
vitamin E  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
blood vessel development  (ISO)
bone mineralization  (IGI)
canonical Wnt signaling pathway  (IBA,IDA,IGI,IMP)
canonical Wnt signaling pathway involved in positive regulation of epithelial to mesenchymal transition  (ISO)
cell cycle arrest  (ISO)
cellular glucose homeostasis  (IMP)
cellular response to starvation  (IMP)
embryonic digestive tract morphogenesis  (IGI)
embryonic genitalia morphogenesis  (IGI)
embryonic hindgut morphogenesis  (IGI)
face morphogenesis  (IGI)
fat cell differentiation  (ISO)
glucose homeostasis  (IMP,ISO)
glucose metabolic process  (IMP)
glycogen metabolic process  (IMP)
in utero embryonic development  (IMP)
insulin metabolic process  (IMP)
maintenance of DNA repeat elements  (ISO)
multicellular organism growth  (IMP)
myoblast fate commitment  (IMP,ISO)
negative regulation of BMP signaling pathway  (IMP)
negative regulation of canonical Wnt signaling pathway  (ISO)
negative regulation of DNA-binding transcription factor activity  (ISO)
negative regulation of extrinsic apoptotic signaling pathway  (ISO)
negative regulation of fat cell differentiation  (IMP)
negative regulation of fibroblast growth factor receptor signaling pathway  (IMP)
negative regulation of organ growth  (IMP)
negative regulation of transcription by RNA polymerase II  (IMP,ISO)
negative regulation of transcription, DNA-templated  (ISO)
negative regulation of type B pancreatic cell apoptotic process  (ISO)
neural tube development  (IGI)
odontogenesis of dentin-containing tooth  (IGI)
oligodendrocyte development  (IMP)
pituitary gland development  (IMP)
positive regulation of apoptotic process  (IMP)
positive regulation of epithelial cell proliferation  (IMP,ISO)
positive regulation of gluconeogenesis  (IMP)
positive regulation of heparan sulfate proteoglycan biosynthetic process  (ISO)
positive regulation of insulin secretion  (IMP,ISO)
positive regulation of lipid biosynthetic process  (IMP)
positive regulation of protein binding  (ISO)
positive regulation of protein export from nucleus  (ISO)
positive regulation of protein kinase B signaling  (ISO)
positive regulation of transcription by RNA polymerase II  (IDA,IGI,IMP,ISO)
positive regulation of transcription, DNA-templated  (IMP)
positive regulation of triglyceride biosynthetic process  (IMP)
post-embryonic development  (IMP)
regulation of gluconeogenesis  (IMP)
regulation of hormone metabolic process  (ISO)
regulation of insulin secretion involved in cellular response to glucose stimulus  (IMP,ISO)
regulation of myelination  (IMP)
regulation of oligodendrocyte differentiation  (IMP)
regulation of skeletal muscle tissue development  (IMP)
regulation of smooth muscle cell proliferation  (ISO)
regulation of transcription by RNA polymerase II  (IBA,IMP,ISO)
regulation of transcription, DNA-templated  (IDA)
response to glucose  (IMP)
secretory granule localization  (IMP)
skin development  (IGI)
somatic stem cell population maintenance  (IGI,IMP)
Wnt signaling pathway  (IEA)

Cellular Component

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal basilar artery morphology  (IEA)
abnormal cecum position  (IEA)
abnormal colon goblet cell morphology  (IAGP)
abnormal colon morphology  (IAGP)
abnormal craniofacial development  (IAGP)
abnormal crypts of Lieberkuhn morphology  (IAGP)
abnormal digestive system morphology  (IAGP)
abnormal digestive system physiology  (IAGP)
abnormal elbow joint morphology  (IEA)
abnormal enterocyte morphology  (IAGP)
abnormal enterocyte proliferation  (IAGP)
abnormal epidermis stratum basale morphology  (IAGP)
abnormal eye muscle morphology  (IEA)
abnormal forebrain morphology  (IEA)
abnormal glucose homeostasis  (IAGP)
abnormal hair follicle morphology  (IAGP)
abnormal hepatocyte physiology  (IAGP)
abnormal inferior vena cava morphology  (IEA)
abnormal inferior vena cava topology  (IEA)
abnormal intestinal enteroendocrine cell morphology  (IAGP)
abnormal intestinal epithelium morphology  (IAGP)
abnormal intestinal goblet cell morphology  (IAGP)
abnormal intestine development  (IAGP)
abnormal intestine morphology  (IAGP)
abnormal Mullerian duct morphology  (IEA)
abnormal muscle morphology  (IAGP)
abnormal muscle regeneration  (IAGP)
abnormal nasal septum morphology  (IEA)
abnormal neurohypophysis morphology  (IEA)
abnormal pituitary intermediate lobe morphology  (IAGP)
abnormal pulmonary valve cusp morphology  (IEA)
abnormal response/metabolism to endogenous compounds  (IAGP)
abnormal skin physiology  (IAGP)
abnormal small intestine goblet cell morphology  (IAGP)
abnormal small intestine morphology  (IAGP)
abnormal umbilical vein topology  (IEA)
abnormal ureter topology  (IEA)
abnormal vertebral artery morphology  (IEA)
abnormal vertebral artery topology  (IEA)
abnormal Wolffian duct morphology  (IEA)
absent ductus venosus valve  (IEA)
absent gastric milk in neonates  (IAGP)
absent hair follicles  (IAGP)
absent kidney  (IEA)
absent Paneth cells  (IAGP)
absent vibrissae  (IAGP)
basisphenoid bone foramen  (IEA)
common truncal valve  (IEA)
decreased birth body size  (IAGP)
decreased birth weight  (IAGP)
decreased body size  (IAGP)
decreased body weight  (IAGP)
decreased circulating alkaline phosphatase level  (IEA)
decreased circulating glucose level  (IAGP)
decreased circulating insulin level  (IAGP)
decreased enterocyte cell number  (IAGP)
decreased insulin secretion  (IAGP)
decreased keratinocyte proliferation  (IAGP)
decreased lean body mass  (IAGP)
decreased pancreatic beta cell mass  (IAGP)
decreased Paneth cell number  (IAGP)
decreased satellite cell number  (IAGP)
decreased total body fat amount  (IAGP)
dilated liver sinusoidal spaces  (IEA)
double outlet right ventricle  (IEA)
duplication of ductus venosus  (IEA)
ectopic Paneth cells  (IAGP)
embryo tissue necrosis  (IAGP)
enlarged adenohypophysis  (IAGP)
enlarged pituitary gland  (IAGP)
fusion of vertebral arches  (IEA)
heterochrony  (IEA)
hypoactivity  (IAGP)
hypoglycemia  (IAGP)
impaired glucose tolerance  (IAGP)
improved glucose tolerance  (IAGP)
increased bone mineral content  (IEA)
increased bone mineral density  (IEA)
increased circulating glucose level  (IAGP)
increased circulating insulin level  (IAGP)
increased enterocyte apoptosis  (IAGP)
increased intestinal adenoma incidence  (IAGP)
increased lean body mass  (IEA)
increased susceptibility to induced colitis  (IEA)
lethality, complete penetrance  (IAGP)
muscular ventricular septal defect  (IEA)
neonatal lethality, complete penetrance  (IAGP)
perimembraneous ventricular septal defect  (IEA)
polyphagia  (IAGP)
preweaning lethality, complete penetrance  (IEA)
retroesophageal right subclavian artery  (IEA)
symmetric azygos veins  (IEA)
thin epidermis  (IAGP)
thin skin  (IAGP)
vertebral fusion  (IEA)
References

Additional References at PubMed
PMID:9488439   PMID:9697701   PMID:9784592   PMID:9792805   PMID:9880534   PMID:10027409   PMID:10090727   PMID:10349636   PMID:10631168   PMID:10821773   PMID:10898789   PMID:10937998  
PMID:11042159   PMID:11076861   PMID:11493561   PMID:11731231   PMID:11731265   PMID:11845287   PMID:12361972   PMID:12466851   PMID:12477932   PMID:12520002   PMID:12861022   PMID:12874278  
PMID:12907761   PMID:14610273   PMID:14667415   PMID:14681479   PMID:15037319   PMID:15057272   PMID:15102471   PMID:15186480   PMID:15201223   PMID:15226261   PMID:15226823   PMID:15342465  
PMID:15342729   PMID:15576399   PMID:15576404   PMID:15578569   PMID:15736266   PMID:15778706   PMID:15866165   PMID:15917450   PMID:16027046   PMID:16141072   PMID:16141073   PMID:16192304  
PMID:16204248   PMID:16210377   PMID:16407833   PMID:16602821   PMID:16644143   PMID:16678101   PMID:16724116   PMID:16950124   PMID:16971467   PMID:17053159   PMID:17065530   PMID:17257418  
PMID:17335794   PMID:17362910   PMID:17366625   PMID:17596282   PMID:17607356   PMID:17681174   PMID:17699607   PMID:17727834   PMID:17919533   PMID:17920061   PMID:17953485   PMID:17967808  
PMID:18094027   PMID:18270576   PMID:18287559   PMID:18351662   PMID:18481957   PMID:18554416   PMID:18635608   PMID:18799693   PMID:19125404   PMID:19165927   PMID:19168596   PMID:19213727  
PMID:19251639   PMID:19303461   PMID:19304756   PMID:19468708   PMID:19487454   PMID:19503085   PMID:19515692   PMID:19515974   PMID:19525957   PMID:19542358   PMID:19700620   PMID:19718027  
PMID:19741146   PMID:19780901   PMID:19805521   PMID:19816403   PMID:19845015   PMID:19892877   PMID:19898815   PMID:19924825   PMID:20044351   PMID:20059953   PMID:20412781   PMID:20459822  
PMID:20637749   PMID:20660756   PMID:20803090   PMID:20816794   PMID:20883686   PMID:20889500   PMID:20932939   PMID:21177349   PMID:21228006   PMID:21246658   PMID:21247964   PMID:21267068  
PMID:21335239   PMID:21362171   PMID:21383188   PMID:21452227   PMID:21525287   PMID:21673050   PMID:21677750   PMID:21775418   PMID:21821099   PMID:21828091   PMID:21856776   PMID:21873635  
PMID:21935430   PMID:22046400   PMID:22102609   PMID:22160878   PMID:22166339   PMID:22393260   PMID:22421044   PMID:22573616   PMID:22717537   PMID:22719219   PMID:22796301   PMID:22902740  
PMID:22966074   PMID:22967502   PMID:23028378   PMID:23152144   PMID:23260145   PMID:23824573   PMID:23824574   PMID:23863478   PMID:23912999   PMID:23977356   PMID:24035868   PMID:24146773  
PMID:24154528   PMID:24317852   PMID:24463605   PMID:24498290   PMID:24586192   PMID:24670930   PMID:24748645   PMID:24948802   PMID:24952961   PMID:25015099   PMID:25083995   PMID:25178657  
PMID:25355422   PMID:25398947   PMID:25715398   PMID:25807280   PMID:25810530   PMID:25885041   PMID:25977363   PMID:25980463   PMID:26278035   PMID:26387456   PMID:26452989   PMID:26526197  
PMID:26771085   PMID:26928066   PMID:26955760   PMID:27018594   PMID:27151576   PMID:27281479   PMID:27301468   PMID:27302397   PMID:27414999   PMID:27510977   PMID:27624071   PMID:27657450  
PMID:27701636   PMID:27742678   PMID:27996060   PMID:28102847   PMID:28185240   PMID:28219675   PMID:28343277   PMID:28445727   PMID:28577307   PMID:28589954   PMID:28656232   PMID:28807898  
PMID:28830217   PMID:29031500   PMID:29084951   PMID:29246974   PMID:29317436   PMID:29394407   PMID:29539633   PMID:29751817   PMID:29768404   PMID:29967064   PMID:30200414   PMID:30398926  
PMID:30529950   PMID:30567484   PMID:30604848   PMID:30635555   PMID:30886049   PMID:30948248   PMID:31037731   PMID:31125668   PMID:31138536   PMID:31257105   PMID:31337269   PMID:31419437  
PMID:31589598   PMID:31619789   PMID:31872525   PMID:32014863   PMID:32098917   PMID:32160556   PMID:32203164   PMID:32204099   PMID:32325033   PMID:32414917   PMID:32675279   PMID:32820720  
PMID:32868762   PMID:33201874  


Genomics

Comparative Map Data
Tcf7l2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391955,730,226 - 55,922,091 (+)NCBIGRCm39mm39
GRCm39 Ensembl1955,730,252 - 55,922,086 (+)Ensembl
GRCm381955,741,797 - 55,933,659 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1955,741,820 - 55,933,654 (+)EnsemblGRCm38mm10GRCm38
MGSCv371955,816,300 - 56,008,145 (+)NCBIGRCm37mm9NCBIm37
MGSCv361955,795,518 - 55,986,492 (+)NCBImm8
Celera1957,933,629 - 58,125,906 (+)NCBICelera
Cytogenetic Map19D2NCBI
cM Map1951.59NCBI
TCF7L2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl10112,950,247 - 113,167,678 (+)EnsemblGRCh38hg38GRCh38
GRCh3810112,950,247 - 113,167,678 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh3710114,710,006 - 114,927,437 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3610114,700,201 - 114,916,063 (+)NCBINCBI36hg18NCBI36
Build 3410114,700,200 - 114,916,058NCBI
Celera10108,437,726 - 108,655,178 (+)NCBI
Cytogenetic Map10q25.2-q25.3NCBI
HuRef10108,337,509 - 108,554,907 (+)NCBIHuRef
CHM1_110114,992,047 - 115,209,474 (+)NCBICHM1_1
Tcf7l2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21254,785,956 - 254,978,967 (+)NCBI
Rnor_6.0 Ensembl1276,011,416 - 276,012,351 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl1276,659,542 - 276,730,514 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01276,686,911 - 276,730,517 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01283,387,566 - 283,412,364 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.01284,077,353 - 284,118,928 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41262,031,823 - 262,226,710 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1250,490,882 - 250,683,257 (+)NCBICelera
Cytogenetic Map1q55NCBI
Tcf7l2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543118,020,409 - 18,209,134 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495543118,020,309 - 18,207,926 (+)NCBIChiLan1.0ChiLan1.0
TCF7L2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.110112,991,588 - 113,193,992 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl10112,978,167 - 113,192,281 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v010109,541,524 - 109,759,499 (+)NCBIMhudiblu_PPA_v0panPan3
TCF7L2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl2823,966,073 - 24,163,737 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.12823,966,079 - 24,162,775 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Tcf7l2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049364863,473,877 - 3,660,565 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TCF7L2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl14123,343,694 - 123,546,417 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.114123,343,695 - 123,547,332 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.214134,586,288 - 134,790,019 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TCF7L2
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.19105,828,834 - 106,047,810 (+)NCBI
Tcf7l2
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473733,341,574 - 33,526,814 (-)NCBI

Position Markers
24.MMHAP64FRH9.seq  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381955,803,265 - 55,803,428UniSTSGRCm38
MGSCv371955,877,755 - 55,877,918UniSTSGRCm37
Celera1957,995,669 - 57,995,832UniSTS
Cytogenetic Map19D2UniSTS
cM Map1953.0UniSTS
Whitehead_YAC19 UniSTS
Tcf7l2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
MGSCv371955,987,136 - 55,987,213UniSTSGRCm37
MGSCv371956,006,273 - 56,007,472UniSTSGRCm37
MGSCv371956,006,116 - 56,006,389UniSTSGRCm37
Celera1958,105,159 - 58,105,236UniSTS
Celera1958,123,857 - 58,124,133UniSTS
Celera1958,124,015 - 58,125,223UniSTS
Cytogenetic Map19D2UniSTS
cM Map1953.0UniSTS
cM Map1953.0UniSTS
cM Map1953.0UniSTS
RH142640  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381955,931,763 - 55,931,899UniSTSGRCm38
MGSCv371956,006,253 - 56,006,389UniSTSGRCm37
Celera1958,123,994 - 58,124,133UniSTS
Cytogenetic Map19D2UniSTS
cM Map1953.0UniSTS
UniSTS:237978  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381955,880,348 - 55,880,714UniSTSGRCm38
MGSCv371955,954,838 - 55,955,204UniSTSGRCm37
Celera1958,072,862 - 58,073,228UniSTS
Cytogenetic Map19D2UniSTS
cM Map1953.0UniSTS
Tcf7l2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381955,912,646 - 55,912,723UniSTSGRCm38
MGSCv371955,987,136 - 55,987,213UniSTSGRCm37
Celera1958,105,159 - 58,105,236UniSTS
Cytogenetic Map19D2UniSTS
cM Map1953.0UniSTS
Tcf7l2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381955,931,626 - 55,931,899UniSTSGRCm38
MGSCv371956,006,116 - 56,006,389UniSTSGRCm37
Celera1958,123,857 - 58,124,133UniSTS
Cytogenetic Map19D2UniSTS
cM Map1953.0UniSTS
Tcf7l2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381955,931,783 - 55,932,982UniSTSGRCm38
MGSCv371956,006,273 - 56,007,472UniSTSGRCm37
Celera1958,124,015 - 58,125,223UniSTS
Cytogenetic Map19D2UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
12790634Ebm1_mEpidermolysis Bullosa modifier 1 (mouse)192500000059000000Mouse
1301451Ath16_matherosclerosis 16 (mouse)Not determined192543847859438566Mouse
13506250Renmq1_mrenal mercury accumulation QTL 1 (mouse)192739715561397266Mouse
4141138Femwf11_mfemur work to failure 11 (mouse)Not determined2815190961431566Mouse
4141562Pas3b_mpulmonary adenoma susceptibility 3b (mouse)Not determined2977296261431566Mouse
1300683Fembm7_mfemoral bone morphometry 7 (mouse)Not determined193015278561431566Mouse
1301410Cd8mts6_mCD8 memory T cell subset 6 (mouse)Not determined193015279261431566Mouse
1301942Pas13_mpulmonary adenoma susceptibility 13 (mouse)Not determined193015279261431566Mouse
1300856Nobq2_mNew Zealand obese QTL 2 (mouse)Not determined193090944161431566Mouse
1301741Lith2_mlithogenic gene 2 (mouse)Not determined193300371961431566Mouse
1301639Stnn_mstriatal neuron number (mouse)Not determined193396351461431566Mouse
4141019Tgq29_mtriglyceride QTL 29 (mouse)Not determined3460834861431566Mouse
1302170Tanidd1_mtally ho associated non-insulin dependednt diabetes mellitus 1 (mouse)Not determined193676416661431566Mouse
4141650Chldq9_mcholesterol and HDL QTL 9 (mouse)Not determined193789455061431566Mouse
1301466T2dm2_mtype 2 diabetes mellitus 2 (mouse)Not determined193838761861431566Mouse
1302104Lfp1_mlong free running period 1 (mouse)Not determined193919563261431566Mouse
10043896Bw21_mbody weight QTL 21 (mouse)Not determined193960763461431566Mouse
1300585Pgia12_mproteoglycan induced arthritis 12 (mouse)Not determined194259842761431566Mouse
11667075Led3_mlate embryonic death 3 (mouse)195109994059135440Mouse
11528548Sluc35_msusceptibility to lung cancer 35 (mouse)195538761859135440Mouse

miRNA Target Status

Confirmed Target Of
miRNA GeneMature miRNAMethod NameResult TypeData TypeSupport TypePMID
Mir155mmu-miR-155-5pOncomiRDBexternal_infoNANA21460854
Mir210mmu-miR-210-3pMirtarbaseexternal_infoLuciferase reporter assay//Western blot//MicroarraFunctional MTI20492721
Mir210mmu-miR-210-3pMirecordsexternal_infoNANA20492721

Predicted Target Of
Summary Value
Count of predictions:7846
Count of miRNA genes:792
Interacting mature miRNAs:1045
Transcripts:ENSMUST00000041717, ENSMUST00000061496, ENSMUST00000111646, ENSMUST00000111649, ENSMUST00000111651, ENSMUST00000111652, ENSMUST00000111653, ENSMUST00000111654, ENSMUST00000111656, ENSMUST00000111657, ENSMUST00000111658, ENSMUST00000111659, ENSMUST00000111662, ENSMUST00000126434, ENSMUST00000127233, ENSMUST00000127653, ENSMUST00000133008, ENSMUST00000142291, ENSMUST00000143334, ENSMUST00000145249, ENSMUST00000148666, ENSMUST00000153888
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001142918 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001142919 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001142920 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001142921 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001142922 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001142923 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001142924 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001331135 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001331136 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001331137 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001331138 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001331139 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001331140 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001331141 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001331142 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001331143 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001331144 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001331145 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001331146 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001331147 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001331148 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001331149 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001331150 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_009333 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_138565 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006526860 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006526861 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006526866 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006526888 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006526894 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006526895 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006526897 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017318110 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017318112 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017318114 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017318115 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017318116 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017318117 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017318119 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017318126 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017318127 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017318131 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017318132 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017318135 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030250847 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030250851 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030250853 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030250854 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030250855 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030250859 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030250860 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036161506 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036161507 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036161508 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC118695 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC137148 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC157916 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF107298 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF107299 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF363722 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF363724 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF363725 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF363726 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI451561 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ223070 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK018098 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK035059 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK038720 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK048536 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK052583 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK084488 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK132465 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK163011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AW823541 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY072035 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC009807 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC011397 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CA750374 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466585 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000041717   ⟹   ENSMUSP00000042950
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1955,741,820 - 55,933,252 (+)Ensembl
RefSeq Acc Id: ENSMUST00000061496   ⟹   ENSMUSP00000050081
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1955,742,269 - 55,933,253 (+)Ensembl
RefSeq Acc Id: ENSMUST00000111646   ⟹   ENSMUSP00000107273
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1955,895,510 - 55,933,229 (+)Ensembl
RefSeq Acc Id: ENSMUST00000111649
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1955,742,243 - 55,912,722 (+)Ensembl
RefSeq Acc Id: ENSMUST00000111651
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1955,742,243 - 55,912,723 (+)Ensembl
RefSeq Acc Id: ENSMUST00000111652
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1955,742,242 - 55,912,769 (+)Ensembl
RefSeq Acc Id: ENSMUST00000111653
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1955,742,269 - 55,925,236 (+)Ensembl
RefSeq Acc Id: ENSMUST00000111654
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1955,741,884 - 55,925,239 (+)Ensembl
RefSeq Acc Id: ENSMUST00000111656   ⟹   ENSMUSP00000107283
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1955,742,332 - 55,933,654 (+)Ensembl
RefSeq Acc Id: ENSMUST00000111657   ⟹   ENSMUSP00000107284
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1955,742,342 - 55,932,195 (+)Ensembl
RefSeq Acc Id: ENSMUST00000111658   ⟹   ENSMUSP00000107286
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1955,741,884 - 55,932,715 (+)Ensembl
RefSeq Acc Id: ENSMUST00000111659   ⟹   ENSMUSP00000107287
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1955,742,058 - 55,932,209 (+)Ensembl
RefSeq Acc Id: ENSMUST00000111662   ⟹   ENSMUSP00000107291
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1955,741,820 - 55,933,229 (+)Ensembl
RefSeq Acc Id: ENSMUST00000126434
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1955,742,269 - 55,910,549 (+)Ensembl
RefSeq Acc Id: ENSMUST00000127233   ⟹   ENSMUSP00000123428
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1955,742,267 - 55,933,231 (+)Ensembl
RefSeq Acc Id: ENSMUST00000127653
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1955,895,662 - 55,912,637 (+)Ensembl
RefSeq Acc Id: ENSMUST00000133008
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1955,742,845 - 55,910,681 (+)Ensembl
RefSeq Acc Id: ENSMUST00000142291   ⟹   ENSMUSP00000118042
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1955,894,534 - 55,918,966 (+)Ensembl
RefSeq Acc Id: ENSMUST00000143334
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1955,898,309 - 55,919,041 (+)Ensembl
RefSeq Acc Id: ENSMUST00000145249
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1955,893,352 - 55,919,618 (+)Ensembl
RefSeq Acc Id: ENSMUST00000148666   ⟹   ENSMUSP00000119759
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1955,898,309 - 55,919,604 (+)Ensembl
RefSeq Acc Id: ENSMUST00000153888   ⟹   ENSMUSP00000118661
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1955,742,264 - 55,932,209 (+)Ensembl
RefSeq Acc Id: NM_001142918   ⟹   NP_001136390
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,730,242 - 55,922,087 (+)NCBI
GRCm381955,741,810 - 55,933,655 (+)NCBI
MGSCv371955,816,300 - 56,008,145 (+)RGD
Celera1957,933,629 - 58,125,906 (+)RGD
cM Map19 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001142919   ⟹   NP_001136391
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,730,242 - 55,922,087 (+)NCBI
GRCm381955,741,810 - 55,933,655 (+)NCBI
MGSCv371955,816,300 - 56,008,145 (+)RGD
Celera1957,933,629 - 58,125,906 (+)RGD
cM Map19 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001142920   ⟹   NP_001136392
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,730,242 - 55,922,087 (+)NCBI
GRCm381955,741,810 - 55,933,655 (+)NCBI
MGSCv371955,816,300 - 56,008,145 (+)RGD
Celera1957,933,629 - 58,125,906 (+)RGD
cM Map19 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001142921   ⟹   NP_001136393
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,730,242 - 55,922,087 (+)NCBI
GRCm381955,741,810 - 55,933,655 (+)NCBI
MGSCv371955,816,300 - 56,008,145 (+)RGD
Celera1957,933,629 - 58,125,906 (+)RGD
cM Map19 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001142922   ⟹   NP_001136394
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,730,242 - 55,922,087 (+)NCBI
GRCm381955,741,810 - 55,933,655 (+)NCBI
MGSCv371955,816,300 - 56,008,145 (+)RGD
Celera1957,933,629 - 58,125,906 (+)RGD
cM Map19 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001142923   ⟹   NP_001136395
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,730,242 - 55,922,087 (+)NCBI
GRCm381955,741,810 - 55,933,655 (+)NCBI
MGSCv371955,816,300 - 56,008,145 (+)RGD
Celera1957,933,629 - 58,125,906 (+)RGD
cM Map19 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001142924   ⟹   NP_001136396
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,883,753 - 55,922,087 (+)NCBI
GRCm381955,895,321 - 55,933,655 (+)NCBI
MGSCv371955,816,300 - 56,008,145 (+)RGD
Celera1957,933,629 - 58,125,906 (+)RGD
cM Map19 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001331135   ⟹   NP_001318064
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,730,242 - 55,922,087 (+)NCBI
GRCm381955,741,810 - 55,933,655 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001331136   ⟹   NP_001318065
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,730,242 - 55,922,087 (+)NCBI
GRCm381955,741,810 - 55,933,655 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001331137   ⟹   NP_001318066
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,730,242 - 55,922,087 (+)NCBI
GRCm381955,741,810 - 55,933,655 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001331138   ⟹   NP_001318067
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,730,242 - 55,922,087 (+)NCBI
GRCm381955,741,810 - 55,933,655 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001331139   ⟹   NP_001318068
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,730,242 - 55,922,087 (+)NCBI
GRCm381955,741,810 - 55,933,655 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001331140   ⟹   NP_001318069
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,730,242 - 55,922,087 (+)NCBI
GRCm381955,741,810 - 55,933,655 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001331141   ⟹   NP_001318070
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,730,242 - 55,922,087 (+)NCBI
GRCm381955,741,810 - 55,933,655 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001331142   ⟹   NP_001318071
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,730,242 - 55,922,087 (+)NCBI
GRCm381955,741,810 - 55,933,655 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001331143   ⟹   NP_001318072
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,730,242 - 55,922,087 (+)NCBI
GRCm381955,741,810 - 55,933,655 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001331144   ⟹   NP_001318073
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,730,242 - 55,922,087 (+)NCBI
GRCm381955,741,810 - 55,933,655 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001331145   ⟹   NP_001318074
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,730,242 - 55,922,087 (+)NCBI
GRCm381955,741,810 - 55,933,655 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001331146   ⟹   NP_001318075
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,730,242 - 55,922,087 (+)NCBI
GRCm381955,741,810 - 55,933,655 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001331147   ⟹   NP_001318076
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,730,242 - 55,922,087 (+)NCBI
GRCm381955,741,810 - 55,933,655 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001331148   ⟹   NP_001318077
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,730,242 - 55,922,087 (+)NCBI
GRCm381955,741,810 - 55,933,655 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001331149   ⟹   NP_001318078
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,730,242 - 55,922,087 (+)NCBI
GRCm381955,741,810 - 55,933,655 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001331150   ⟹   NP_001318079
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,730,242 - 55,922,087 (+)NCBI
GRCm381955,741,810 - 55,933,655 (+)NCBI
Sequence:
RefSeq Acc Id: NM_009333   ⟹   NP_033359
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,730,242 - 55,922,087 (+)NCBI
GRCm381955,741,810 - 55,933,655 (+)NCBI
MGSCv371955,816,300 - 56,008,145 (+)RGD
Celera1957,933,629 - 58,125,906 (+)RGD
cM Map19 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_138565
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,730,242 - 55,922,087 (+)NCBI
GRCm381955,741,810 - 55,933,655 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006526860   ⟹   XP_006526923
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,730,227 - 55,922,091 (+)NCBI
GRCm381955,742,256 - 55,933,659 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006526861   ⟹   XP_006526924
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,730,227 - 55,922,091 (+)NCBI
GRCm381955,741,799 - 55,933,659 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006526866   ⟹   XP_006526929
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,730,227 - 55,922,091 (+)NCBI
GRCm381955,742,243 - 55,933,659 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006526888   ⟹   XP_006526951
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,730,227 - 55,922,091 (+)NCBI
GRCm381955,742,243 - 55,933,659 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006526894   ⟹   XP_006526957
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,883,522 - 55,922,091 (+)NCBI
GRCm381955,893,471 - 55,933,659 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006526895   ⟹   XP_006526958
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,881,903 - 55,922,091 (+)NCBI
GRCm381955,893,471 - 55,933,659 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006526897   ⟹   XP_006526960
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,881,903 - 55,922,091 (+)NCBI
GRCm381955,893,471 - 55,933,659 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017318110   ⟹   XP_017173599
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,730,227 - 55,922,091 (+)NCBI
GRCm381955,742,256 - 55,933,659 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017318112   ⟹   XP_017173601
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,730,227 - 55,922,091 (+)NCBI
GRCm381955,742,250 - 55,933,659 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017318114   ⟹   XP_017173603
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,730,227 - 55,922,091 (+)NCBI
GRCm381955,742,256 - 55,933,659 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017318115   ⟹   XP_017173604
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,730,227 - 55,922,091 (+)NCBI
GRCm381955,742,242 - 55,933,659 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017318116   ⟹   XP_017173605
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,730,227 - 55,922,091 (+)NCBI
GRCm381955,742,256 - 55,933,659 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017318117   ⟹   XP_017173606
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,730,227 - 55,922,091 (+)NCBI
GRCm381955,742,256 - 55,933,659 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017318119   ⟹   XP_017173608
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,730,227 - 55,922,091 (+)NCBI
GRCm381955,742,242 - 55,933,659 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017318126   ⟹   XP_017173615
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,730,227 - 55,922,091 (+)NCBI
GRCm381955,742,242 - 55,933,659 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017318127   ⟹   XP_017173616
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,730,226 - 55,922,091 (+)NCBI
GRCm381955,742,250 - 55,933,659 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017318131   ⟹   XP_017173620
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,730,227 - 55,922,091 (+)NCBI
GRCm381955,742,243 - 55,933,659 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017318132   ⟹   XP_017173621
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,881,903 - 55,922,091 (+)NCBI
GRCm381955,893,471 - 55,933,659 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017318135   ⟹   XP_017173624
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,883,377 - 55,922,091 (+)NCBI
GRCm381955,894,909 - 55,933,659 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030250847   ⟹   XP_030106707
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,730,227 - 55,922,091 (+)NCBI
GRCm381955,742,243 - 55,933,659 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030250851   ⟹   XP_030106711
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,883,522 - 55,922,091 (+)NCBI
GRCm381955,894,909 - 55,933,659 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030250853   ⟹   XP_030106713
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,883,522 - 55,922,091 (+)NCBI
GRCm381955,894,909 - 55,933,659 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030250854   ⟹   XP_030106714
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,881,903 - 55,922,091 (+)NCBI
GRCm381955,893,471 - 55,933,659 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030250855   ⟹   XP_030106715
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,883,522 - 55,922,091 (+)NCBI
GRCm381955,893,471 - 55,933,659 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030250859   ⟹   XP_030106719
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,881,903 - 55,922,091 (+)NCBI
GRCm381955,893,471 - 55,933,659 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030250860   ⟹   XP_030106720
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,881,903 - 55,922,091 (+)NCBI
GRCm381955,893,471 - 55,933,659 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036161506   ⟹   XP_036017399
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,730,227 - 55,922,091 (+)NCBI
RefSeq Acc Id: XM_036161507   ⟹   XP_036017400
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,730,227 - 55,922,091 (+)NCBI
RefSeq Acc Id: XM_036161508   ⟹   XP_036017401
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391955,730,227 - 55,922,091 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001136390 (Get FASTA)   NCBI Sequence Viewer  
  NP_001136391 (Get FASTA)   NCBI Sequence Viewer  
  NP_001136392 (Get FASTA)   NCBI Sequence Viewer  
  NP_001136393 (Get FASTA)   NCBI Sequence Viewer  
  NP_001136394 (Get FASTA)   NCBI Sequence Viewer  
  NP_001136395 (Get FASTA)   NCBI Sequence Viewer  
  NP_001136396 (Get FASTA)   NCBI Sequence Viewer  
  NP_001318064 (Get FASTA)   NCBI Sequence Viewer  
  NP_001318065 (Get FASTA)   NCBI Sequence Viewer  
  NP_001318066 (Get FASTA)   NCBI Sequence Viewer  
  NP_001318067 (Get FASTA)   NCBI Sequence Viewer  
  NP_001318068 (Get FASTA)   NCBI Sequence Viewer  
  NP_001318069 (Get FASTA)   NCBI Sequence Viewer  
  NP_001318070 (Get FASTA)   NCBI Sequence Viewer  
  NP_001318071 (Get FASTA)   NCBI Sequence Viewer  
  NP_001318072 (Get FASTA)   NCBI Sequence Viewer  
  NP_001318073 (Get FASTA)   NCBI Sequence Viewer  
  NP_001318074 (Get FASTA)   NCBI Sequence Viewer  
  NP_001318075 (Get FASTA)   NCBI Sequence Viewer  
  NP_001318076 (Get FASTA)   NCBI Sequence Viewer  
  NP_001318077 (Get FASTA)   NCBI Sequence Viewer  
  NP_001318078 (Get FASTA)   NCBI Sequence Viewer  
  NP_001318079 (Get FASTA)   NCBI Sequence Viewer  
  NP_033359 (Get FASTA)   NCBI Sequence Viewer  
  XP_006526923 (Get FASTA)   NCBI Sequence Viewer  
  XP_006526924 (Get FASTA)   NCBI Sequence Viewer  
  XP_006526929 (Get FASTA)   NCBI Sequence Viewer  
  XP_006526951 (Get FASTA)   NCBI Sequence Viewer  
  XP_006526957 (Get FASTA)   NCBI Sequence Viewer  
  XP_006526958 (Get FASTA)   NCBI Sequence Viewer  
  XP_006526960 (Get FASTA)   NCBI Sequence Viewer  
  XP_017173599 (Get FASTA)   NCBI Sequence Viewer  
  XP_017173601 (Get FASTA)   NCBI Sequence Viewer  
  XP_017173603 (Get FASTA)   NCBI Sequence Viewer  
  XP_017173604 (Get FASTA)   NCBI Sequence Viewer  
  XP_017173605 (Get FASTA)   NCBI Sequence Viewer  
  XP_017173606 (Get FASTA)   NCBI Sequence Viewer  
  XP_017173608 (Get FASTA)   NCBI Sequence Viewer  
  XP_017173615 (Get FASTA)   NCBI Sequence Viewer  
  XP_017173616 (Get FASTA)   NCBI Sequence Viewer  
  XP_017173620 (Get FASTA)   NCBI Sequence Viewer  
  XP_017173621 (Get FASTA)   NCBI Sequence Viewer  
  XP_017173624 (Get FASTA)   NCBI Sequence Viewer  
  XP_030106707 (Get FASTA)   NCBI Sequence Viewer  
  XP_030106711 (Get FASTA)   NCBI Sequence Viewer  
  XP_030106713 (Get FASTA)   NCBI Sequence Viewer  
  XP_030106714 (Get FASTA)   NCBI Sequence Viewer  
  XP_030106715 (Get FASTA)   NCBI Sequence Viewer  
  XP_030106719 (Get FASTA)   NCBI Sequence Viewer  
  XP_030106720 (Get FASTA)   NCBI Sequence Viewer  
  XP_036017399 (Get FASTA)   NCBI Sequence Viewer  
  XP_036017400 (Get FASTA)   NCBI Sequence Viewer  
  XP_036017401 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAD16967 (Get FASTA)   NCBI Sequence Viewer  
  AAD16968 (Get FASTA)   NCBI Sequence Viewer  
  AAK77485 (Get FASTA)   NCBI Sequence Viewer  
  AAK77486 (Get FASTA)   NCBI Sequence Viewer  
  AAK77488 (Get FASTA)   NCBI Sequence Viewer  
  AAK77489 (Get FASTA)   NCBI Sequence Viewer  
  AAK77490 (Get FASTA)   NCBI Sequence Viewer  
  AAL58534 (Get FASTA)   NCBI Sequence Viewer  
  BAC28929 (Get FASTA)   NCBI Sequence Viewer  
  BAC30109 (Get FASTA)   NCBI Sequence Viewer  
  BAC33366 (Get FASTA)   NCBI Sequence Viewer  
  BAC39196 (Get FASTA)   NCBI Sequence Viewer  
  BAE21182 (Get FASTA)   NCBI Sequence Viewer  
  CAA11071 (Get FASTA)   NCBI Sequence Viewer  
  EDL01739 (Get FASTA)   NCBI Sequence Viewer  
  EDL01740 (Get FASTA)   NCBI Sequence Viewer  
  EDL01741 (Get FASTA)   NCBI Sequence Viewer  
  EDL01742 (Get FASTA)   NCBI Sequence Viewer  
  EDL01743 (Get FASTA)   NCBI Sequence Viewer  
  EDL01744 (Get FASTA)   NCBI Sequence Viewer  
  Q924A0 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_033359   ⟸   NM_009333
- Peptide Label: isoform 3
- UniProtKB: F6WBK9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001136390   ⟸   NM_001142918
- Peptide Label: isoform 1
- UniProtKB: Q924A0 (UniProtKB/Swiss-Prot),   E9QQ91 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001136391   ⟸   NM_001142919
- Peptide Label: isoform 2
- UniProtKB: Q8CAI6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001136392   ⟸   NM_001142920
- Peptide Label: isoform 4
- UniProtKB: E9Q990 (UniProtKB/TrEMBL),   Q8BS68 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001136393   ⟸   NM_001142921
- Peptide Label: isoform 5
- UniProtKB: Q924A0 (UniProtKB/Swiss-Prot),   A0A0R4J1G0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001136394   ⟸   NM_001142922
- Peptide Label: isoform 6
- UniProtKB: E9QQ90 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001136395   ⟸   NM_001142923
- Peptide Label: isoform 7
- UniProtKB: D3YWT3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001136396   ⟸   NM_001142924
- Peptide Label: isoform 8
- UniProtKB: Q924A0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006526924   ⟸   XM_006526861
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006526929   ⟸   XM_006526866
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_006526951   ⟸   XM_006526888
- Peptide Label: isoform X14
- Sequence:
RefSeq Acc Id: XP_006526923   ⟸   XM_006526860
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006526958   ⟸   XM_006526895
- Peptide Label: isoform X20
- Sequence:
RefSeq Acc Id: XP_006526960   ⟸   XM_006526897
- Peptide Label: isoform X23
- Sequence:
RefSeq Acc Id: XP_006526957   ⟸   XM_006526894
- Peptide Label: isoform X19
- Sequence:
RefSeq Acc Id: XP_017173604   ⟸   XM_017318115
- Peptide Label: isoform X8
- Sequence:
RefSeq Acc Id: XP_017173608   ⟸   XM_017318119
- Peptide Label: isoform X11
- Sequence:
RefSeq Acc Id: XP_017173615   ⟸   XM_017318126
- Peptide Label: isoform X15
- Sequence:
RefSeq Acc Id: XP_017173620   ⟸   XM_017318131
- Peptide Label: isoform X18
- Sequence:
RefSeq Acc Id: XP_017173616   ⟸   XM_017318127
- Peptide Label: isoform X16
- Sequence:
RefSeq Acc Id: XP_017173601   ⟸   XM_017318112
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_017173605   ⟸   XM_017318116
- Peptide Label: isoform X9
- Sequence:
RefSeq Acc Id: XP_017173606   ⟸   XM_017318117
- Peptide Label: isoform X10
- Sequence:
RefSeq Acc Id: XP_017173599   ⟸   XM_017318110
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_017173603   ⟸   XM_017318114
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: XP_017173624   ⟸   XM_017318135
- Peptide Label: isoform X29
- Sequence:
RefSeq Acc Id: XP_017173621   ⟸   XM_017318132
- Peptide Label: isoform X22
- Sequence:
RefSeq Acc Id: NP_001318077   ⟸   NM_001331148
- Peptide Label: isoform 22
RefSeq Acc Id: NP_001318075   ⟸   NM_001331146
- Peptide Label: isoform 20
RefSeq Acc Id: NP_001318078   ⟸   NM_001331149
- Peptide Label: isoform 23
RefSeq Acc Id: NP_001318079   ⟸   NM_001331150
- Peptide Label: isoform 24
RefSeq Acc Id: NP_001318076   ⟸   NM_001331147
- Peptide Label: isoform 21
RefSeq Acc Id: NP_001318067   ⟸   NM_001331138
- Peptide Label: isoform 12
RefSeq Acc Id: NP_001318064   ⟸   NM_001331135
- Peptide Label: isoform 9
RefSeq Acc Id: NP_001318065   ⟸   NM_001331136
- Peptide Label: isoform 10
RefSeq Acc Id: NP_001318066   ⟸   NM_001331137
- Peptide Label: isoform 11
RefSeq Acc Id: NP_001318068   ⟸   NM_001331139
- Peptide Label: isoform 13
RefSeq Acc Id: NP_001318071   ⟸   NM_001331142
- Peptide Label: isoform 16
RefSeq Acc Id: NP_001318069   ⟸   NM_001331140
- Peptide Label: isoform 14
RefSeq Acc Id: NP_001318072   ⟸   NM_001331143
- Peptide Label: isoform 17
RefSeq Acc Id: NP_001318073   ⟸   NM_001331144
- Peptide Label: isoform 18
RefSeq Acc Id: NP_001318074   ⟸   NM_001331145
- Peptide Label: isoform 19
RefSeq Acc Id: NP_001318070   ⟸   NM_001331141
- Peptide Label: isoform 15
RefSeq Acc Id: XP_030106707   ⟸   XM_030250847
- Peptide Label: isoform X6
RefSeq Acc Id: XP_030106715   ⟸   XM_030250855
- Peptide Label: isoform X26
RefSeq Acc Id: XP_030106720   ⟸   XM_030250860
- Peptide Label: isoform X28
RefSeq Acc Id: XP_030106719   ⟸   XM_030250859
- Peptide Label: isoform X27
RefSeq Acc Id: XP_030106714   ⟸   XM_030250854
- Peptide Label: isoform X25
RefSeq Acc Id: XP_030106711   ⟸   XM_030250851
- Peptide Label: isoform X21
RefSeq Acc Id: XP_030106713   ⟸   XM_030250853
- Peptide Label: isoform X24
RefSeq Acc Id: ENSMUSP00000107273   ⟸   ENSMUST00000111646
RefSeq Acc Id: ENSMUSP00000107284   ⟸   ENSMUST00000111657
RefSeq Acc Id: ENSMUSP00000107286   ⟸   ENSMUST00000111658
RefSeq Acc Id: ENSMUSP00000107287   ⟸   ENSMUST00000111659
RefSeq Acc Id: ENSMUSP00000107283   ⟸   ENSMUST00000111656
RefSeq Acc Id: ENSMUSP00000107291   ⟸   ENSMUST00000111662
RefSeq Acc Id: ENSMUSP00000123428   ⟸   ENSMUST00000127233
RefSeq Acc Id: ENSMUSP00000050081   ⟸   ENSMUST00000061496
RefSeq Acc Id: ENSMUSP00000042950   ⟸   ENSMUST00000041717
RefSeq Acc Id: ENSMUSP00000119759   ⟸   ENSMUST00000148666
RefSeq Acc Id: ENSMUSP00000118661   ⟸   ENSMUST00000153888
RefSeq Acc Id: ENSMUSP00000118042   ⟸   ENSMUST00000142291
RefSeq Acc Id: XP_036017399   ⟸   XM_036161506
- Peptide Label: isoform X12
RefSeq Acc Id: XP_036017401   ⟸   XM_036161508
- Peptide Label: isoform X17
RefSeq Acc Id: XP_036017400   ⟸   XM_036161507
- Peptide Label: isoform X13
Protein Domains
CTNNB1_binding   HMG box

Promoters
RGD ID:13679818
Promoter ID:EPDNEW_M24059
Type:initiation region
Name:Tcf7l2_1
Description:Mus musculus transcription factor 7 like 2, T cell specific,HMG box , transcript variant 19, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M24060  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381955,741,818 - 55,741,878EPDNEW
RGD ID:13679826
Promoter ID:EPDNEW_M24060
Type:multiple initiation site
Name:Tcf7l2_2
Description:Mus musculus transcription factor 7 like 2, T cell specific,HMG box , transcript variant 19, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M24059  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381955,742,064 - 55,742,124EPDNEW
RGD ID:6830456
Promoter ID:MM_KWN:27380
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   ES_Cell,   Kidney,   Liver,   MEF_B4,   MEF_B6
Transcripts:ENSMUST00000078917,   ENSMUST00000086848,   ENSMUST00000111647,   ENSMUST00000111651,   ENSMUST00000111652,   ENSMUST00000111654,   ENSMUST00000111657,   ENSMUST00000111662,   NM_001142918,   NM_001142919,   NM_001142920,   NM_001142921,   NM_001142922,   NM_001142923,   NM_009333,   OTTMUST00000048431,   OTTMUST00000048439,   OTTMUST00000048440,   UC008HYC.1,   UC008HYF.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361955,815,571 - 55,817,647 (+)MPROMDB
RGD ID:6830458
Promoter ID:MM_KWN:27385
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Liver
Transcripts:NM_001142924,   OTTMUST00000048443
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361955,969,766 - 55,970,266 (+)MPROMDB
RGD ID:6830459
Promoter ID:MM_KWN:27386
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Liver
Transcripts:OTTMUST00000048441,   OTTMUST00000048442
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361955,971,716 - 55,972,216 (+)MPROMDB
RGD ID:6830460
Promoter ID:MM_KWN:27387
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Liver
Transcripts:UC008HYO.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361955,991,716 - 55,992,216 (+)MPROMDB
RGD ID:6847610
Promoter ID:MM_ACW:27197
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney,   Lung
Transcripts:TCF7L2.VBSEP07-UNSPLICED
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361956,005,876 - 56,006,376 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1202879 AgrOrtholog
Ensembl Genes ENSMUSG00000024985 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000042950 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000050081 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000107273 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000107283 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000107284 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000107286 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000107287 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000107291 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000118042 UniProtKB/TrEMBL
  ENSMUSP00000118661 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000119759 UniProtKB/TrEMBL
  ENSMUSP00000123428 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000041717 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000061496 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000111646 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000111656 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000111657 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000111658 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000111659 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000111662 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000127233 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000142291 UniProtKB/TrEMBL
  ENSMUST00000148666 UniProtKB/TrEMBL
  ENSMUST00000153888