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ONTOLOGY REPORT - ANNOTATIONS


Term:central nervous system development
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Accession:GO:0007417 term browser browse the term
Definition:The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain and spinal cord. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord.
Synonyms:exact_synonym: CNS development
 xref: Wikipedia:Neural_development



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central nervous system development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acan aggrecan involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:78,702,974...78,764,847
Ensembl chr 7:78,703,231...78,764,847
JBrowse link
G Adgra2 adhesion G protein-coupled receptor A2 involved_in IMP
IBA
(MGI:4839817|PMID:21071672) UniProt
GO_Central
PMID:21071672 GO_REF:0000033 MGI:4839817 NCBI chr 8:27,575,546...27,613,464
Ensembl chr 8:27,575,611...27,613,464
JBrowse link
G Aldh3a2 aldehyde dehydrogenase family 3, subfamily A2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:61,114,240...61,158,267
Ensembl chr11:61,114,243...61,158,290
JBrowse link
G Aldh5a1 aldhehyde dehydrogenase family 5, subfamily A1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr13:25,091,562...25,121,740
Ensembl chr13:25,091,562...25,121,644
JBrowse link
G Ang angiogenin, ribonuclease, RNase A family, 5 involved_in NAS (MGI:3722461|PMID:17468498) UniProt PMID:17468498 MGI:3722461 NCBI chr14:51,328,607...51,339,462
Ensembl chr14:51,328,607...51,339,466
JBrowse link
G Ankle2 ankyrin repeat and LEM domain containing 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:110,378,847...110,404,517
Ensembl chr 5:110,378,870...110,404,513
JBrowse link
G Aplp1 amyloid beta precursor like protein 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:30,134,405...30,144,960
Ensembl chr 7:30,134,407...30,144,960
JBrowse link
G Aplp2 amyloid beta precursor-like protein 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:31,060,853...31,123,144
Ensembl chr 9:31,060,853...31,123,111
JBrowse link
G App amyloid beta precursor protein involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:84,751,236...84,972,187
Ensembl chr16:84,746,573...84,970,654
JBrowse link
G Arnt2 aryl hydrocarbon receptor nuclear translocator 2 involved_in IMP (MGI:2157648|PMID:11318878) UniProt PMID:11318878 MGI:2157648 NCBI chr 7:83,895,486...84,059,201
Ensembl chr 7:83,895,486...84,059,384
JBrowse link
G B3gnt5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:19,578,943...19,591,508
Ensembl chr16:19,578,958...19,591,503
JBrowse link
G Bcan brevican involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:87,894,839...87,908,458
Ensembl chr 3:87,894,838...87,907,537
JBrowse link
G Capg capping actin protein, gelsolin like involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:72,515,265...72,539,966
Ensembl chr 6:72,521,374...72,539,966
JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 4:8,690,345...8,868,449
Ensembl chr 4:8,690,406...8,867,659
JBrowse link
G Chrd chordin acts_upstream_of_or_within IMP (PMID:10688202) MGI PMID:10688202 NCBI chr16:20,551,528...20,561,132
Ensembl chr16:20,551,877...20,561,134
JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 acts_upstream_of_or_within IMP (PMID:11823447) MGI PMID:11823447 NCBI chr10:17,598,452...17,601,422
Ensembl chr10:17,598,966...17,601,422
JBrowse link
G Col2a1 collagen, type II, alpha 1 involved_in IEP (MGI:86312|PMID:9119111) UniProt PMID:9119111 MGI:86312 NCBI chr15:97,873,483...97,902,525
Ensembl chr15:97,873,483...97,902,576
JBrowse link
G Cox7b cytochrome c oxidase subunit 7B involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr  X:105,059,306...105,066,056
Ensembl chr  X:105,059,306...105,066,056
JBrowse link
G Cyp26a1 cytochrome P450, family 26, subfamily a, polypeptide 1 acts_upstream_of_or_within IGI
IMP
(PMID:17067568) MGI PMID:17067568 NCBI chr19:37,686,186...37,689,984
Ensembl chr19:37,686,246...37,689,984
JBrowse link
G Cyp26c1 cytochrome P450, family 26, subfamily c, polypeptide 1 acts_upstream_of_or_within IGI (PMID:17067568) MGI PMID:17067568 NCBI chr19:37,673,560...37,681,774
Ensembl chr19:37,674,029...37,681,846
JBrowse link
G Dab1 disabled 1 involved_in TAS (MGI:85812|PMID:9009273) UniProt PMID:9009273 MGI:85812 NCBI chr 4:103,476,425...104,602,041
Ensembl chr 4:103,476,556...104,602,041
JBrowse link
G Dhx30 DExH-box helicase 30 involved_in IDA (MGI:5616495|PMID:25219788) UniProt PMID:25219788 MGI:5616495 NCBI chr 9:109,913,387...109,946,728
Ensembl chr 9:109,913,388...109,946,898
JBrowse link
G Dmbx1 diencephalon/mesencephalon homeobox 1 involved_in IEP (MGI:2183620|PMID:12055180) UniProt PMID:12055180 MGI:2183620 NCBI chr 4:115,772,316...115,797,794
Ensembl chr 4:115,772,316...115,797,123
JBrowse link
G Dner delta/notch-like EGF repeat containing involved_in ISO (PMID:11950833) UniProt PMID:11950833 NCBI chr 1:84,347,560...84,673,942
Ensembl chr 1:84,347,560...84,673,942
JBrowse link
G Drp2 dystrophin related protein 2 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr  X:133,304,868...133,357,323
Ensembl chr  X:133,305,300...133,357,322
JBrowse link
G Dscam DS cell adhesion molecule involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:96,388,652...96,971,935
Ensembl chr16:96,392,040...96,971,952
JBrowse link
G Dscaml1 DS cell adhesion molecule like 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:45,338,735...45,665,011
Ensembl chr 9:45,337,926...45,665,010
JBrowse link
G Ecrg4 ECRG4 augurin precursor involved_in ISS
IBA
(MGI:6316455|PMID:21349154) UniProt
GO_Central
PMID:21349154 GO_REF:0000033 MGI:6316455 NCBI chr 1:43,769,762...43,781,724
Ensembl chr 1:43,769,762...43,781,738
JBrowse link
G Eif2b2 eukaryotic translation initiation factor 2B, subunit 2 beta involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr12:85,266,255...85,273,402
Ensembl chr12:85,266,255...85,273,402
JBrowse link
G Elp3 elongator acetyltransferase complex subunit 3 involved_in IMP (MGI:3850815|PMID:19185337) UniProt PMID:19185337 MGI:3850815 NCBI chr14:65,767,895...65,830,561
Ensembl chr14:65,767,898...65,830,524
JBrowse link
G Emx1 empty spiracles homeobox 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:85,164,913...85,181,445
Ensembl chr 6:85,164,420...85,181,444
JBrowse link
G Emx2 empty spiracles homeobox 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr19:59,447,122...59,453,789
Ensembl chr19:59,446,804...59,453,789
JBrowse link
G Fkrp fukutin related protein acts_upstream_of_or_within IMP (PMID:20675713) MGI PMID:20675713 NCBI chr 7:16,543,192...16,550,657
Ensembl chr 7:16,543,171...16,550,657
JBrowse link
G Fmr1 fragile X messenger ribonucleoprotein 1 acts_upstream_of_or_within IMP (PMID:12700164) MGI PMID:12700164 NCBI chr  X:67,722,144...67,761,569
Ensembl chr  X:67,722,147...67,761,569
JBrowse link
G Gabra4 gamma-aminobutyric acid type A receptor subunit alpha 4 acts_upstream_of_or_within IMP (PMID:17005728) MGI PMID:17005728 NCBI chr 5:71,727,077...71,815,651
Ensembl chr 5:71,727,092...71,815,651
JBrowse link
G Gba1 glucosylceramidase beta 1 acts_upstream_of_or_within IMP (PMID:18346921) MGI PMID:18346921 NCBI chr 3:89,110,235...89,119,944
Ensembl chr 3:89,110,235...89,116,273
JBrowse link
G Gba2 glucosidase beta 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:43,566,928...43,578,893
Ensembl chr 4:43,566,928...43,578,873
JBrowse link
G Gli3 GLI-Kruppel family member GLI3 acts_upstream_of_or_within IGI
IMP
(PMID:12435628)
(PMID:12435629)
MGI PMID:12435628 PMID:12435629 NCBI chr13:15,638,308...15,904,611
Ensembl chr13:15,637,820...15,904,611
JBrowse link
G Glis2 GLIS family zinc finger 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:4,412,217...4,443,076
Ensembl chr16:4,412,577...4,442,788
JBrowse link
G Grhl3 grainyhead like transcription factor 3 acts_upstream_of_or_within IMP (PMID:11787818) MGI PMID:11787818 NCBI chr 4:135,269,199...135,300,943
Ensembl chr 4:135,269,199...135,300,941
JBrowse link
G Gsn gelsolin involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:35,146,371...35,197,914
Ensembl chr 2:35,146,392...35,197,904
JBrowse link
G Gsx1 GS homeobox 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:147,125,492...147,127,753
Ensembl chr 5:147,125,506...147,127,757
JBrowse link
G Gsx2 GS homeobox 2 acts_upstream_of_or_within IMP (PMID:11731457), (PMID:12724834) MGI PMID:11731457 PMID:12724834 NCBI chr 5:75,236,262...75,238,554
Ensembl chr 5:75,236,262...75,238,554
JBrowse link
G Hapln1 hyaluronan and proteoglycan link protein 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:89,688,654...89,759,951
Ensembl chr13:89,687,915...89,759,771
JBrowse link
G Hapln2 hyaluronan and proteoglycan link protein 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:87,927,865...87,934,818
Ensembl chr 3:87,929,057...87,934,890
JBrowse link
G Hapln3 hyaluronan and proteoglycan link protein 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:78,766,775...78,783,100
Ensembl chr 7:78,764,850...78,780,766
JBrowse link
G Hapln4 hyaluronan and proteoglycan link protein 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:70,536,179...70,543,512
Ensembl chr 8:70,536,107...70,543,512
JBrowse link
G Helt helt bHLH transcription factor acts_upstream_of_or_within IMP (PMID:16968817) MGI PMID:16968817 NCBI chr 8:46,745,080...46,747,785
Ensembl chr 8:46,745,076...46,747,708
JBrowse link
G Htt huntingtin acts_upstream_of_or_within IMP (PMID:9398841) MGI PMID:9398841 NCBI chr 5:34,919,084...35,069,878
Ensembl chr 5:34,919,084...35,069,878
JBrowse link
G Id3 inhibitor of DNA binding 3 involved_in IEP (MGI:73693|PMID:7655079) UniProt PMID:7655079 MGI:73693 NCBI chr 4:135,871,133...135,872,703
Ensembl chr 4:135,870,808...135,873,066
JBrowse link
G Lig4 ligase IV, DNA, ATP-dependent acts_upstream_of_or_within IMP
IGI
(PMID:9875844)
(PMID:10911993)
(PMID:9889105)
MGI PMID:9875844 PMID:9889105 PMID:10911993 NCBI chr 8:10,020,020...10,027,680
Ensembl chr 8:10,019,049...10,027,686
JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha acts_upstream_of_or_within IMP (PMID:15148302) MGI PMID:15148302 NCBI chr 1:167,515,864...167,676,310
Ensembl chr 1:167,516,806...167,676,310
JBrowse link
G Marcks myristoylated alanine rich protein kinase C substrate involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:37,009,239...37,014,922
Ensembl chr10:37,009,371...37,014,916
JBrowse link
G Marcksl1 MARCKS-like 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:129,407,374...129,409,774
Ensembl chr 4:129,407,374...129,409,778
JBrowse link
G Mir124a-1 microRNA 124a-1 acts_upstream_of_or_within IMP (PMID:17403776) MGI PMID:17403776 NCBI chr14:64,828,106...64,828,190
Ensembl chr14:64,828,106...64,828,190
JBrowse link
G Mir124a-2 microRNA 124a-2 acts_upstream_of_or_within IMP (PMID:17403776) MGI PMID:17403776 NCBI chr 3:17,849,826...17,849,934
Ensembl chr 3:17,849,826...17,849,934
JBrowse link
G Mir124a-3 microRNA 124a-3 acts_upstream_of_or_within IMP (PMID:17403776) MGI PMID:17403776 NCBI chr 2:180,535,833...180,535,900
Ensembl chr 2:180,535,833...180,535,900
JBrowse link
G Mnx1 motor neuron and pancreas homeobox 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:29,678,821...29,683,468
Ensembl chr 5:29,678,032...29,683,468
JBrowse link
G Msi1 musashi RNA-binding protein 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:115,567,734...115,593,757
Ensembl chr 5:115,567,658...115,593,757
JBrowse link
G Msi2 musashi RNA-binding protein 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:88,230,208...88,609,197
Ensembl chr11:88,230,208...88,609,339
JBrowse link
G Mtf1 metal response element binding transcription factor 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:124,696,342...124,743,593
Ensembl chr 4:124,695,897...124,743,593
JBrowse link
G Ncan neurocan involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:70,545,735...70,573,494
Ensembl chr 8:70,545,735...70,573,523
JBrowse link
G Ndn necdin, MAGE family member acts_upstream_of_or_within IMP (PMID:15649943) MGI PMID:15649943 NCBI chr 7:61,998,025...61,999,676
Ensembl chr 7:61,996,317...62,000,010
JBrowse link
G Ngfr nerve growth factor receptor (TNFR superfamily, member 16) acts_upstream_of_or_within IMP (PMID:11978834) MGI PMID:11978834 NCBI chr11:95,459,644...95,478,524
Ensembl chr11:95,459,644...95,478,561
JBrowse link
G Nog noggin acts_upstream_of_or_within IMP (PMID:10688202) MGI PMID:10688202 NCBI chr11:89,191,464...89,193,385
Ensembl chr11:89,191,464...89,193,158
JBrowse link
G Norad non-coding RNA activated by DNA damage involved_in IMP (PMID:30735131) MGI PMID:30735131 NCBI chr 2:156,229,983...156,234,899
Ensembl chr 2:156,229,980...156,234,921
JBrowse link
G Noto notochord homeobox involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:85,400,851...85,405,859
Ensembl chr 6:85,400,868...85,405,859
JBrowse link
G Nrcam neuronal cell adhesion molecule involved_in IDA
ISO
(MGI:2447374|PMID:12182881) UniProt
MGI
PMID:12182881 GO_REF:0000119 MGI:2447374 MGI:4834177 NCBI chr12:44,375,568...44,651,977
Ensembl chr12:44,375,668...44,648,747
JBrowse link
G Otx2 orthodenticle homeobox 2 acts_upstream_of_or_within IMP (PMID:12652306)
(PMID:11731459)
MGI PMID:11731459 PMID:12652306 NCBI chr14:48,894,238...48,905,101
Ensembl chr14:48,895,134...48,911,276
JBrowse link
G Pax2 paired box 2 involved_in IEP (MGI:48612|PMID:1723950) UniProt PMID:1723950 MGI:48612 NCBI chr19:44,735,040...44,826,708
Ensembl chr19:44,735,057...44,826,310
JBrowse link
G Pax8 paired box 8 involved_in IEP (MGI:48612|PMID:1723950) UniProt PMID:1723950 MGI:48612 NCBI chr 2:24,310,563...24,365,611
Ensembl chr 2:24,310,572...24,365,611
JBrowse link
G Pias4 protein inhibitor of activated STAT 4 acts_upstream_of_or_within IEP (MGI:1861161|PMID:10854042) UniProt PMID:10854042 MGI:1861161 NCBI chr10:80,989,795...81,003,554
Ensembl chr10:80,989,100...81,003,757
JBrowse link
G Pten phosphatase and tensin homolog acts_upstream_of_or_within IMP (PMID:12091320) MGI PMID:12091320 NCBI chr19:32,734,977...32,803,560
Ensembl chr19:32,734,897...32,803,560
JBrowse link
G Reln reelin involved_in
acts_upstream_of_or_within
IBA
IMP
(PMID:11900467) GO_Central
MGI
PMID:11900467 GO_REF:0000033 NCBI chr 5:22,089,452...22,549,703
Ensembl chr 5:22,089,452...22,549,700
JBrowse link
G Runx1 runt related transcription factor 1 acts_upstream_of_or_within IMP (PMID:16174759) MGI PMID:16174759 NCBI chr16:92,398,354...92,622,962
Ensembl chr16:92,398,354...92,623,037
JBrowse link
G Scin scinderin involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:40,109,768...40,184,227
Ensembl chr12:40,109,768...40,184,227
JBrowse link
G Sema6b sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:56,430,085...56,447,343
Ensembl chr17:56,430,085...56,447,343
JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within IMP (PMID:12435628) MGI PMID:12435628 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254
JBrowse link
G Slc2a1 solute carrier family 2 (facilitated glucose transporter), member 1 acts_upstream_of_or_within ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:118,966,001...118,994,527
Ensembl chr 4:118,965,908...118,995,180
JBrowse link
G Smo smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within
IBA
IGI
(PMID:12435628) GO_Central
MGI
PMID:12435628 GO_REF:0000033 NCBI chr 6:29,735,480...29,761,359
Ensembl chr 6:29,735,502...29,761,364
JBrowse link
G Sox6 SRY (sex determining region Y)-box 6 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:115,070,107...115,639,186
Ensembl chr 7:115,070,107...115,638,031
JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 involved_in IEP (MGI:86312|PMID:9119111) UniProt PMID:9119111 MGI:86312 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586
JBrowse link
G Spink5 serine peptidase inhibitor, Kazal type 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr18:44,092,612...44,155,554
Ensembl chr18:44,096,302...44,155,568
JBrowse link
G Sptbn1 spectrin beta, non-erythrocytic 1 involved_in IMP
ISO
(MGI:6742151|PMID:34211179) UniProt
MGI
PMID:34211179 GO_REF:0000119 MGI:4834177 MGI:6742151 NCBI chr11:30,049,395...30,218,384
Ensembl chr11:30,049,395...30,218,175
JBrowse link
G Stk3 serine/threonine kinase 3 acts_upstream_of_or_within IGI (PMID:19786569) MGI PMID:19786569 NCBI chr15:34,875,645...35,155,990
Ensembl chr15:34,875,642...35,179,067
JBrowse link
G Stk4 serine/threonine kinase 4 acts_upstream_of_or_within IGI (PMID:19786569) MGI PMID:19786569 NCBI chr 2:163,916,033...163,997,444
Ensembl chr 2:163,912,242...163,997,444
JBrowse link
G Szt2 SZT2 subunit of KICSTOR complex acts_upstream_of_or_within IMP (PMID:19624305) MGI PMID:19624305 NCBI chr 4:118,219,937...118,266,483
Ensembl chr 4:118,219,940...118,266,470
JBrowse link
G Thoc6 THO complex 6 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:23,887,592...23,892,891
Ensembl chr17:23,887,588...23,892,856
JBrowse link
G Tlx1 T cell leukemia, homeobox 1 acts_upstream_of_or_within IMP (PMID:12023301) MGI PMID:12023301 NCBI chr19:45,138,531...45,145,382
Ensembl chr19:45,139,119...45,145,382
JBrowse link
G Tlx3 T cell leukemia, homeobox 3 acts_upstream_of_or_within IMP (PMID:12023301) MGI PMID:12023301 NCBI chr11:33,150,748...33,158,588
Ensembl chr11:33,150,752...33,153,589
JBrowse link
G Tpp1 tripeptidyl peptidase I involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:105,394,018...105,401,489
Ensembl chr 7:105,394,018...105,401,442
JBrowse link
G Trp53 transformation related protein 53 acts_upstream_of_or_within IGI (PMID:16199867) MGI PMID:16199867 NCBI chr11:69,471,174...69,482,699
Ensembl chr11:69,471,185...69,482,699
JBrowse link
G Trp53bp2 transformation related protein 53 binding protein 2 acts_upstream_of_or_within IMP (PMID:16702401) MGI PMID:16702401 NCBI chr 1:182,236,737...182,289,997
Ensembl chr 1:182,236,737...182,289,997
JBrowse link
G Vax1 ventral anterior homeobox 1 involved_in
acts_upstream_of_or_within
IBA
IMP
(PMID:10601035)
(PMID:10601036)
GO_Central
MGI
PMID:10601035 PMID:10601036 GO_REF:0000033 NCBI chr19:59,152,912...59,158,829
Ensembl chr19:59,154,619...59,158,488
JBrowse link
G Vax2 ventral anterior homeobox 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:83,688,221...83,715,295
Ensembl chr 6:83,688,246...83,715,295
JBrowse link
G Vcan versican involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:89,803,429...89,891,146
Ensembl chr13:89,803,431...89,890,628
JBrowse link
G Vps13b vacuolar protein sorting 13B involved_in IMP (MGI:6393201|PMID:31495077) UniProt PMID:31495077 MGI:6393201 NCBI chr15:35,371,264...35,931,375
Ensembl chr15:35,371,306...35,931,375
JBrowse link
G Vps4b vacuolar protein sorting 4B acts_upstream_of_or_within IMP (PMID:28675177) MGI PMID:28675177 NCBI chr 1:106,698,518...106,724,455
Ensembl chr 1:106,691,801...106,724,458
JBrowse link
G Xrcc4 X-ray repair complementing defective repair in Chinese hamster cells 4 acts_upstream_of_or_within IMP (PMID:9875844) MGI PMID:9875844 NCBI chr13:89,997,033...90,237,727
Ensembl chr13:89,922,146...90,237,727
JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 involved_in IDA (MGI:3687421|PMID:8541544) UniProt PMID:8541544 MGI:3687421 NCBI chr 9:48,563,097...48,747,525
Ensembl chr 9:48,565,597...48,747,522
JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 acts_upstream_of_or_within IGI (PMID:16598713) MGI PMID:16598713 NCBI chr18:5,591,330...5,775,468
Ensembl chr18:5,591,860...5,775,467
JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within IGI (PMID:16598713) MGI PMID:16598713 NCBI chr 2:44,873,523...45,007,378
Ensembl chr 2:44,873,644...45,007,407
JBrowse link
G Zfp523 zinc finger protein 523 involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:28,396,136...28,424,860
Ensembl chr17:28,396,103...28,424,860
JBrowse link
G Zic1 zinc finger protein of the cerebellum 1 acts_upstream_of_or_within
involved_in
IGI
IMP
IBA
(PMID:11756505)
(PMID:9412507)
MGI
GO_Central
PMID:9412507 PMID:11756505 GO_REF:0000033 NCBI chr 9:91,240,111...91,250,136
Ensembl chr 9:91,240,111...91,247,863
JBrowse link
G Zic2 zinc finger protein of the cerebellum 2 involved_in
acts_upstream_of_or_within
IBA
IGI
(PMID:11756505) GO_Central
MGI
PMID:11756505 GO_REF:0000033 NCBI chr14:122,712,796...122,717,740
Ensembl chr14:122,712,847...122,717,264
JBrowse link
G Zic3 zinc finger protein of the cerebellum 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:57,075,988...57,081,990
Ensembl chr  X:57,068,060...57,087,096
JBrowse link
G Zic4 zinc finger protein of the cerebellum 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:91,247,636...91,271,404
Ensembl chr 9:91,244,466...91,271,401
JBrowse link
G Zic5 zinc finger protein of the cerebellum 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:122,696,572...122,703,127
Ensembl chr14:122,694,207...122,703,089
JBrowse link
abducens nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf2 activating transcription factor 2 involved_in IMP (PMID:21533046) MGI PMID:21533046 NCBI chr 2:73,646,853...73,723,094
Ensembl chr 2:73,646,853...73,722,983
JBrowse link
adenohypophysis development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Drd2 dopamine receptor D2 acts_upstream_of_or_within IMP (PMID:9140068) MGI PMID:9140068 NCBI chr 9:49,251,703...49,319,468
Ensembl chr 9:49,251,927...49,319,477
JBrowse link
G Ghrh growth hormone releasing hormone acts_upstream_of_or_within IMP (PMID:15985453) MGI PMID:15985453 NCBI chr 2:157,171,416...157,190,645
Ensembl chr 2:157,171,417...157,189,426
JBrowse link
G Ghrhr growth hormone releasing hormone receptor acts_upstream_of_or_within IMP (PMID:1270792), (PMID:1329576), (PMID:1504465) MGI PMID:1270792 PMID:1329576 PMID:1504465 NCBI chr 6:55,353,204...55,365,515
Ensembl chr 6:55,353,280...55,365,515
JBrowse link
G Gsx1 GS homeobox 1 acts_upstream_of_or_within IMP (PMID:8631293) MGI PMID:8631293 NCBI chr 5:147,125,492...147,127,753
Ensembl chr 5:147,125,506...147,127,757
JBrowse link
G Hes1 hes family bHLH transcription factor 1 acts_upstream_of_or_within IMP (PMID:18996108) MGI PMID:18996108 NCBI chr16:29,883,259...29,886,614
Ensembl chr16:29,883,202...29,886,614
JBrowse link
G Pou1f1 POU domain, class 1, transcription factor 1 involved_in ISO RGD
MGI
PMID:16216912 GO_REF:0000096 MGI:4417868 RGD:1601440 NCBI chr16:65,317,398...65,331,904
Ensembl chr16:65,317,397...65,331,183
JBrowse link
G Prop1 paired like homeodomain factor 1 acts_upstream_of_or_within IMP (PMID:18996108) MGI PMID:18996108 NCBI chr11:50,841,633...50,844,584
Ensembl chr11:50,841,633...50,844,592
JBrowse link
G Slc6a3 solute carrier family 6 (neurotransmitter transporter, dopamine), member 3 acts_upstream_of_or_within IMP (PMID:9247269) MGI PMID:9247269 NCBI chr13:73,684,270...73,726,791
Ensembl chr13:73,684,866...73,726,791
JBrowse link
G Sox2 SRY (sex determining region Y)-box 2 acts_upstream_of_or_within ISO
IMP
(PMID:16932809) RGD
MGI
PMID:16932809 PMID:21815952 RGD:8661681 NCBI chr 3:34,704,144...34,706,610
Ensembl chr 3:34,704,554...34,706,610
JBrowse link
adenohypophysis morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Duox2 dual oxidase 2 acts_upstream_of_or_within IMP (PMID:17440044) MGI PMID:17440044 NCBI chr 2:122,109,727...122,129,221
Ensembl chr 2:122,109,728...122,128,930
JBrowse link
ammon gyrus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp8 low density lipoprotein receptor-related protein 8, apolipoprotein e receptor involved_in IMP (MGI:3821675|PMID:18778775) CACAO PMID:18778775 MGI:3821675 NCBI chr 4:107,659,337...107,734,037
Ensembl chr 4:107,659,066...107,734,037
JBrowse link
amygdala development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1a2 ATPase, Na+/K+ transporting, alpha 2 polypeptide acts_upstream_of_or_within IMP (MGI:2664023|PMID:12805306) ARUK-UCL PMID:12805306 MGI:2664023 NCBI chr 1:172,099,276...172,125,631
Ensembl chr 1:172,099,276...172,125,631
JBrowse link
G Esr2 estrogen receptor 2 (beta) ISO RGD PMID:22791648 RGD:8694158 NCBI chr12:76,167,193...76,224,033
Ensembl chr12:76,167,193...76,224,033
JBrowse link
G Nf1 neurofibromin 1 acts_upstream_of_or_within IGI (PMID:25242307) MGI PMID:25242307 NCBI chr11:79,223,541...79,472,435
Ensembl chr11:79,230,519...79,472,438
JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within IMP (PMID:12527005) MGI PMID:12527005 NCBI chr10:42,437,959...42,459,721
Ensembl chr10:42,437,959...42,459,628
JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 acts_upstream_of_or_within IGI (PMID:25242307) MGI PMID:25242307 NCBI chr 7:97,437,748...97,561,588
Ensembl chr 7:97,437,748...97,561,588
JBrowse link
G Tbr1 T-box brain transcription factor 1 acts_upstream_of_or_within IMP (PMID:24441682) MGI PMID:24441682 NCBI chr 2:61,633,228...61,644,458
Ensembl chr 2:61,633,274...61,644,458
JBrowse link
G Uba6 ubiquitin-like modifier activating enzyme 6 acts_upstream_of_or_within IMP (PMID:23499007) MGI PMID:23499007 NCBI chr 5:86,258,579...86,320,602
Ensembl chr 5:86,257,146...86,320,662
JBrowse link
anterior commissure morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family, member e22 acts_upstream_of_or_within IMP (PMID:22284184) MGI PMID:22284184 NCBI chr 3:18,108,489...18,111,678
Ensembl chr 3:18,108,338...18,111,681
JBrowse link
G Draxin dorsal inhibitory axon guidance protein involved_in IMP (MGI:5467661|PMID:23206892) UniProt PMID:23206892 MGI:5467661 NCBI chr 4:148,182,894...148,215,582
Ensembl chr 4:148,182,894...148,215,155
JBrowse link
G Fbxo45 F-box protein 45 acts_upstream_of_or_within IMP (PMID:19398581) MGI PMID:19398581 NCBI chr16:32,048,930...32,065,843
Ensembl chr16:32,048,930...32,065,976
JBrowse link
G Nfib nuclear factor I/B involved_in IMP (MGI:4453290|PMID:19961580) UniProt PMID:19961580 MGI:4453290 NCBI chr 4:82,208,410...82,424,988
Ensembl chr 4:82,208,410...82,623,987
JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within IMP (PMID:11997145) MGI PMID:11997145 NCBI chr10:42,437,959...42,459,721
Ensembl chr10:42,437,959...42,459,628
JBrowse link
G Plxna4 plexin A4 acts_upstream_of_or_within IMP (PMID:15814794) MGI PMID:15814794 NCBI chr 6:32,121,478...32,565,127
Ensembl chr 6:32,121,203...32,565,127
JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan involved_in
acts_upstream_of_or_within
IMP (MGI:5467661|PMID:23206892)
(PMID:21055390)
UniProt
MGI
PMID:21055390 PMID:23206892 MGI:5467661 NCBI chr 7:97,999,875...98,010,602
Ensembl chr 7:97,999,875...98,010,535
JBrowse link
G Wdr47 WD repeat domain 47 acts_upstream_of_or_within IMP (PMID:29078390) MGI PMID:29078390 NCBI chr 3:108,498,302...108,553,035
Ensembl chr 3:108,498,595...108,553,035
JBrowse link
astrocyte activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora2a adenosine A2a receptor involved_in ISO RGD
MGI
PMID:12838511 GO_REF:0000096 MGI:4417868 RGD:1625689 NCBI chr10:75,152,711...75,170,626
Ensembl chr10:75,152,711...75,170,618
JBrowse link
G Ager advanced glycosylation end product-specific receptor involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:34,816,545...34,819,911
Ensembl chr17:34,816,836...34,819,910
JBrowse link
G Agt angiotensinogen acts_upstream_of_or_within IMP (PMID:9734405) MGI PMID:9734405 NCBI chr 8:125,283,326...125,296,445
Ensembl chr 8:125,283,273...125,296,445
JBrowse link
G App amyloid beta precursor protein involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:84,751,236...84,972,187
Ensembl chr16:84,746,573...84,970,654
JBrowse link
G Bace2 beta-site APP-cleaving enzyme 2 ISO RGD PMID:21073551 RGD:13782176 NCBI chr16:97,157,928...97,244,136
Ensembl chr16:97,157,942...97,244,136
JBrowse link
G C1qa complement component 1, q subcomponent, alpha polypeptide involved_in IGI (MGI:3607035|PMID:15269255) ARUK-UCL PMID:15269255 MGI:3607035 NCBI chr 4:136,623,227...136,626,155
Ensembl chr 4:136,623,228...136,626,114
JBrowse link
G C5ar1 complement component 5a receptor 1 involved_in IGI (MGI:4354701|PMID:19561098) ARUK-UCL PMID:19561098 MGI:4354701 NCBI chr 7:15,980,668...15,993,465
Ensembl chr 7:15,980,668...15,993,465
JBrowse link
G Cntf ciliary neurotrophic factor involved_in ISO
IBA
spinal cord astrocytes RGD
GO_Central
MGI
PMID:11771938 GO_REF:0000033 GO_REF:0000096 MGI:4417868 RGD:1626172 NCBI chr19:12,740,892...12,742,996
Ensembl chr19:12,741,024...12,742,996
JBrowse link
G Egfr epidermal growth factor receptor involved_in ISO RGD
MGI
PMID:16837601 GO_REF:0000096 MGI:4417868 RGD:1581900 NCBI chr11:16,700,153...16,868,158
Ensembl chr11:16,702,203...16,868,158
JBrowse link
G Ifng interferon gamma involved_in IGI
ISO
(MGI:4454469|PMID:20368278) ARUK-UCL
MGI
PMID:20368278 GO_REF:0000119 MGI:4454469 MGI:4834177 NCBI chr10:118,276,951...118,281,799
Ensembl chr10:118,276,951...118,281,797
JBrowse link
G Ifngr1 interferon gamma receptor 1 involved_in IGI (MGI:3697769|PMID:17255335) ARUK-UCL PMID:17255335 MGI:3697769 NCBI chr10:19,467,697...19,485,977
Ensembl chr10:19,467,697...19,485,977
JBrowse link
G Il1b interleukin 1 beta acts_upstream_of_or_within IDA (PMID:28377412) MGI PMID:28377412 NCBI chr 2:129,206,490...129,213,059
Ensembl chr 2:129,206,490...129,213,059
JBrowse link
G Mt2 metallothionein 2 ISO RGD PMID:19837066 RGD:6483825 NCBI chr 8:94,899,246...94,900,195
Ensembl chr 8:94,899,292...94,900,196
JBrowse link
G Naglu alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB) acts_upstream_of_or_within IMP (PMID:26607664) MGI PMID:26607664 NCBI chr11:100,960,918...100,968,483
Ensembl chr11:100,960,838...100,968,498
JBrowse link
G Psen1 presenilin 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr12:83,734,926...83,781,869
Ensembl chr12:83,734,926...83,781,973
JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within IMP (PMID:23680462) MGI PMID:23680462 NCBI chr 6:29,735,480...29,761,359
Ensembl chr 6:29,735,502...29,761,364
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in IGI (MGI:6095556|PMID:29073081) ARUK-UCL PMID:29073081 MGI:6095556 NCBI chr17:48,653,429...48,659,304
Ensembl chr17:48,653,429...48,661,175
JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 involved_in ISO RGD
MGI
PMID:34852714 GO_REF:0000096 MGI:4417868 RGD:155882542 NCBI chr 2:44,873,523...45,007,378
Ensembl chr 2:44,873,644...45,007,407
JBrowse link
astrocyte activation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:84,751,236...84,972,187
Ensembl chr16:84,746,573...84,970,654
JBrowse link
G Grn granulin involved_in IMP (MGI:4421471|PMID:20026663) UniProt PMID:20026663 MGI:4421471 NCBI chr11:102,321,333...102,327,635
Ensembl chr11:102,321,141...102,327,874
JBrowse link
G Lrp1 low density lipoprotein receptor-related protein 1 involved_in IGI (MGI:5465209|PMID:23152628) ARUK-UCL PMID:23152628 MGI:5465209 NCBI chr10:127,374,026...127,457,158
Ensembl chr10:127,374,030...127,457,017
JBrowse link
G Psen1 presenilin 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr12:83,734,926...83,781,869
Ensembl chr12:83,734,926...83,781,973
JBrowse link
astrocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ager advanced glycosylation end product-specific receptor acts_upstream_of_or_within IMP (PMID:22577135) MGI PMID:22577135 NCBI chr17:34,816,545...34,819,911
Ensembl chr17:34,816,836...34,819,910
JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in IMP (MGI:5504540|PMID:23688253) UniProt PMID:23688253 MGI:5504540 NCBI chr17:15,587,616...15,597,275
Ensembl chr17:15,587,616...15,597,134
JBrowse link
G Drd1 dopamine receptor D1 acts_upstream_of_or_within IMP (PMID:17360497) MGI PMID:17360497 NCBI chr13:54,205,202...54,209,677
Ensembl chr13:54,205,202...54,209,724
JBrowse link
G Eif2b5 eukaryotic translation initiation factor 2B, subunit 5 epsilon involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:20,317,544...20,328,073
Ensembl chr16:20,317,567...20,328,073
JBrowse link
G Gfap glial fibrillary acidic protein acts_upstream_of_or_within IGI (PMID:11487638) MGI PMID:11487638 NCBI chr11:102,778,162...102,791,368
Ensembl chr11:102,778,162...102,791,738
JBrowse link
G Gm5849 predicted gene 5849 involved_in IBA GO_Central GO_REF:0000033 Ensembl chr 3:90,683,126...90,685,187 JBrowse link
G Lamb2 laminin, beta 2 acts_upstream_of_or_within IGI (PMID:19907020) MGI PMID:19907020 NCBI chr 9:108,357,080...108,367,729
Ensembl chr 9:108,356,935...108,367,729
JBrowse link
G Lamc3 laminin gamma 3 acts_upstream_of_or_within IGI (PMID:19907020) MGI PMID:19907020 NCBI chr 2:31,777,293...31,839,095
Ensembl chr 2:31,777,303...31,836,551
JBrowse link
G Plp1 proteolipid protein (myelin) 1 acts_upstream_of_or_within IGI (PMID:24038504) MGI PMID:24038504 NCBI chr  X:135,720,897...135,739,331
Ensembl chr  X:135,723,420...135,740,482
JBrowse link
G Ror1 receptor tyrosine kinase-like orphan receptor 1 involved_in ISO RGD
MGI
PMID:15095375 GO_REF:0000096 MGI:4417868 RGD:11537371 NCBI chr 4:99,952,988...100,302,003
Ensembl chr 4:99,952,988...100,301,962
JBrowse link
G Ror2 receptor tyrosine kinase-like orphan receptor 2 involved_in ISO RGD
MGI
PMID:15095375 GO_REF:0000096 MGI:4417868 RGD:11537371 NCBI chr13:53,263,353...53,440,160
Ensembl chr13:53,263,348...53,440,160
JBrowse link
G S100a8 S100 calcium binding protein A8 (calgranulin A) acts_upstream_of_or_within IGI (PMID:22577135) MGI PMID:22577135 NCBI chr 3:90,576,378...90,577,341
Ensembl chr 3:90,576,285...90,577,342
JBrowse link
G S100a9 S100 calcium binding protein A9 (calgranulin B) acts_upstream_of_or_within
involved_in
IGI
IBA
(PMID:22577135) MGI
GO_Central
PMID:22577135 GO_REF:0000033 NCBI chr 3:90,599,937...90,603,028
Ensembl chr 3:90,599,939...90,603,028
JBrowse link
G Tlr4 toll-like receptor 4 acts_upstream_of_or_within IMP (PMID:22577135) MGI PMID:22577135 NCBI chr 4:66,745,788...66,765,338
Ensembl chr 4:66,745,821...66,848,521
JBrowse link
G Tspan2 tetraspanin 2 acts_upstream_of_or_within IGI
IMP
(PMID:24038504) MGI PMID:24038504 NCBI chr 3:102,642,086...102,679,626
Ensembl chr 3:102,641,845...102,708,829
JBrowse link
G Vim vimentin acts_upstream_of_or_within IGI (PMID:11487638) MGI PMID:11487638 NCBI chr 2:13,579,122...13,587,637
Ensembl chr 2:13,578,738...13,587,637
JBrowse link
astrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc1 ATP-binding cassette, sub-family C member 1 involved_in ISO RGD
MGI
PMID:17141959 GO_REF:0000096 MGI:4417868 RGD:2303044 NCBI chr16:14,179,317...14,292,743
Ensembl chr16:14,179,422...14,293,601
JBrowse link
G Actr3 ARP3 actin-related protein 3 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 1:125,320,642...125,363,464
Ensembl chr 1:125,320,642...125,363,464
JBrowse link
G Bmp2 bone morphogenetic protein 2 acts_upstream_of IDA
IGI
(PMID:15882580) MGI PMID:15882580 NCBI chr 2:133,394,079...133,404,816
Ensembl chr 2:133,394,079...133,404,805
JBrowse link
G Cul4b cullin 4B involved_in IMP (PMID:26025376) MGI PMID:26025376 NCBI chr  X:37,620,493...37,665,073
Ensembl chr  X:37,622,151...37,665,073
JBrowse link
G Dab1 disabled 1 acts_upstream_of IMP (PMID:18848628) MGI PMID:18848628 NCBI chr 4:103,476,425...104,602,041
Ensembl chr 4:103,476,556...104,602,041
JBrowse link
G Eif2b5 eukaryotic translation initiation factor 2B, subunit 5 epsilon involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:20,317,544...20,328,073
Ensembl chr16:20,317,567...20,328,073
JBrowse link
G Eomes eomesodermin involved_in IMP (PMID:30186101) MGI PMID:30186101 NCBI chr 9:118,307,259...118,315,176
Ensembl chr 9:118,307,280...118,315,200
JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of IMP (PMID:12574417) MGI PMID:12574417 NCBI chr 5:33,879,068...33,894,412
Ensembl chr 5:33,879,018...33,894,412
JBrowse link
G Gap43 growth associated protein 43 acts_upstream_of_or_within IMP (PMID:15234344) MGI PMID:15234344 NCBI chr16:42,068,915...42,161,014
Ensembl chr16:42,068,805...42,161,014
JBrowse link
G Hes5 hes family bHLH transcription factor 5 involved_in IDA (MGI:5284803|PMID:15156153) UniProt PMID:15156153 MGI:5284803 NCBI chr 4:155,042,358...155,046,829
Ensembl chr 4:155,045,380...155,046,828
JBrowse link
G Hmbs hydroxymethylbilane synthase ISO RGD PMID:12917623 RGD:2301689 NCBI chr 9:44,247,645...44,255,525
Ensembl chr 9:44,247,636...44,255,525
JBrowse link
G Hmga2 high mobility group AT-hook 2 acts_upstream_of IDA (PMID:18640244) MGI PMID:18640244 NCBI chr10:120,197,173...120,312,374
Ensembl chr10:120,197,180...120,312,374
JBrowse link
G Id2 inhibitor of DNA binding 2 acts_upstream_of IMP (PMID:19109490) MGI PMID:19109490 NCBI chr12:25,143,798...25,146,091
Ensembl chr12:25,143,798...25,147,139
JBrowse link
G Id4 inhibitor of DNA binding 4 acts_upstream_of IGI (PMID:15882580) MGI PMID:15882580 NCBI chr13:48,414,592...48,419,504
Ensembl chr13:48,414,704...48,419,502
JBrowse link
G Large1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within IMP (PMID:16111892) MGI PMID:16111892 NCBI chr 8:73,541,227...74,080,164
Ensembl chr 8:73,541,227...74,080,168
JBrowse link
G Lif leukemia inhibitory factor involved_in ISO RGD
MGI
PMID:17328769 GO_REF:0000096 MGI:4417868 RGD:2326156 NCBI chr11:4,207,587...4,222,514
Ensembl chr11:4,207,557...4,222,514
JBrowse link
G Mfsd8 major facilitator superfamily domain containing 8 acts_upstream_of_or_within IMP (PMID:27654426) MGI PMID:27654426 NCBI chr 3:40,772,500...40,801,322
Ensembl chr 3:40,772,538...40,801,321
JBrowse link
G Mycn v-myc avian myelocytomatosis viral related oncogene, neuroblastoma derived acts_upstream_of IDA (PMID:18640244) MGI PMID:18640244 NCBI chr12:12,986,094...12,991,837
Ensembl chr12:12,986,094...12,991,915
JBrowse link
G Naglu alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB) acts_upstream_of_or_within IMP (PMID:12111813) MGI PMID:12111813 NCBI chr11:100,960,918...100,968,483
Ensembl chr11:100,960,838...100,968,498
JBrowse link
G Nf1 neurofibromin 1 acts_upstream_of IMP (PMID:10442636), (PMID:9878702)
(PMID:11297510)
MGI PMID:9878702 PMID:10442636 PMID:11297510 NCBI chr11:79,223,541...79,472,435
Ensembl chr11:79,230,519...79,472,438
JBrowse link
G Nfix nuclear factor I/X acts_upstream_of_or_within
involved_in
IMP (PMID:21800304)
(PMID:29106906)
MGI PMID:21800304 PMID:29106906 NCBI chr 8:85,431,341...85,527,086
Ensembl chr 8:85,426,505...85,526,973
JBrowse link
G Nkx2-2 NK2 homeobox 2 acts_upstream_of_or_within IMP (PMID:19258013) MGI PMID:19258013 NCBI chr 2:146,967,909...147,037,270
Ensembl chr 2:147,019,466...147,036,163
JBrowse link
G Notch1 notch 1 involved_in ISO RGD
MGI
PMID:19378247 GO_REF:0000096 MGI:4417868 RGD:2325301 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675
JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of IMP (PMID:14702088) MGI PMID:14702088 NCBI chr10:42,437,959...42,459,721
Ensembl chr10:42,437,959...42,459,628
JBrowse link
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 involved_in IMP (PMID:29890290) MGI PMID:29890290 NCBI chr18:39,543,598...39,652,485
Ensembl chr18:39,543,598...39,652,474
JBrowse link
G Pax6 paired box 6 involved_in
acts_upstream_of_or_within
ISO
IMP
(PMID:30186101)
(PMID:19258013)
RGD
MGI
PMID:19258013 PMID:22944581 PMID:30186101 GO_REF:0000096 MGI:4417868 RGD:8552357 NCBI chr 2:105,499,241...105,528,755
Ensembl chr 2:105,499,245...105,527,709
JBrowse link
G S100b S100 protein, beta polypeptide, neural ISO RGD PMID:19147496 RGD:5508832 NCBI chr10:76,089,670...76,097,153
Ensembl chr10:76,089,687...76,096,993
JBrowse link
G Shh sonic hedgehog acts_upstream_of IMP (PMID:10357934) MGI PMID:10357934 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254
JBrowse link
G Sox6 SRY (sex determining region Y)-box 6 involved_in ISO RGD
MGI
PMID:15846364 GO_REF:0000096 MGI:4417868 RGD:1581115 NCBI chr 7:115,070,107...115,639,186
Ensembl chr 7:115,070,107...115,638,031
JBrowse link
G Stat3 signal transducer and activator of transcription 3 involved_in IMP (MGI:5284803|PMID:15156153) UniProt PMID:15156153 MGI:5284803 NCBI chr11:100,777,632...100,830,447
Ensembl chr11:100,775,924...100,830,366
JBrowse link
G Vax1 ventral anterior homeobox 1 acts_upstream_of_or_within IMP (PMID:15590934) MGI PMID:15590934 NCBI chr19:59,152,912...59,158,829
Ensembl chr19:59,154,619...59,158,488
JBrowse link
G Vps54 VPS54 GARP complex subunit involved_in IMP (PMID:29890290) MGI PMID:29890290 NCBI chr11:21,189,032...21,271,133
Ensembl chr11:21,189,281...21,271,136
JBrowse link
astrocyte fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gcm1 glial cells missing homolog 1 acts_upstream_of_or_within IDA (PMID:14573516) MGI PMID:14573516 NCBI chr 9:77,959,240...77,972,906
Ensembl chr 9:77,959,206...77,972,906
JBrowse link
G Sox8 SRY (sex determining region Y)-box 8 acts_upstream_of_or_within IGI (PMID:19490914) MGI PMID:19490914 NCBI chr17:25,784,865...25,789,666
Ensembl chr17:25,784,634...25,789,726
JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 acts_upstream_of_or_within IGI (PMID:19490914) MGI PMID:19490914 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586
JBrowse link
G Tal1 T cell acute lymphocytic leukemia 1 acts_upstream_of_or_within IMP (PMID:16292311) MGI PMID:16292311 NCBI chr 4:114,913,623...114,928,952
Ensembl chr 4:114,913,623...114,928,952
JBrowse link
Bergmann glial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 c-abl oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within IGI (PMID:20980600) MGI PMID:20980600 NCBI chr 2:31,578,256...31,697,105
Ensembl chr 2:31,578,388...31,694,239
JBrowse link
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within IGI (PMID:20980600) MGI PMID:20980600 NCBI chr 1:156,386,160...156,477,189
Ensembl chr 1:156,386,356...156,477,138
JBrowse link
G Gfap glial fibrillary acidic protein acts_upstream_of_or_within IMP (PMID:10816608) MGI PMID:10816608 NCBI chr11:102,778,162...102,791,368
Ensembl chr11:102,778,162...102,791,738
JBrowse link
G Gpr37l1 G protein-coupled receptor 37-like 1 acts_upstream_of IMP (PMID:24062445) MGI PMID:24062445 NCBI chr 1:135,087,988...135,095,419
Ensembl chr 1:135,087,972...135,095,419
JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 acts_upstream_of_or_within IGI (PMID:24431450) MGI PMID:24431450 NCBI chr 9:64,093,066...64,160,887
Ensembl chr 9:64,093,052...64,160,913
JBrowse link
G Mapk1 mitogen-activated protein kinase 1 acts_upstream_of_or_within IGI (PMID:24431450) MGI PMID:24431450 NCBI chr16:16,801,246...16,865,317
Ensembl chr16:16,801,246...16,865,317
JBrowse link
G Mapk3 mitogen-activated protein kinase 3 acts_upstream_of_or_within IGI (PMID:24431450) MGI PMID:24431450 NCBI chr 7:126,358,798...126,364,988
Ensembl chr 7:126,358,773...126,364,991
JBrowse link
G Plpp3 phospholipid phosphatase 3 acts_upstream_of_or_within IMP (PMID:21319224) MGI PMID:21319224 NCBI chr 4:105,014,544...105,089,964
Ensembl chr 4:105,014,544...105,089,961
JBrowse link
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 acts_upstream_of_or_within IGI
IMP
(PMID:24431450) MGI PMID:24431450 NCBI chr 5:121,268,596...121,329,460
Ensembl chr 5:121,268,596...121,329,460
JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within IDA (PMID:10375501) MGI PMID:10375501 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254
JBrowse link
G Ttc21b tetratricopeptide repeat domain 21B acts_upstream_of_or_within IMP (PMID:29615573) MGI PMID:29615573 NCBI chr 2:66,014,131...66,087,144
Ensembl chr 2:66,014,671...66,086,961
JBrowse link
G Vim vimentin acts_upstream_of_or_within IMP (PMID:10816608) MGI PMID:10816608 NCBI chr 2:13,579,122...13,587,637
Ensembl chr 2:13,578,738...13,587,637
JBrowse link
brain development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aatk apoptosis-associated tyrosine kinase acts_upstream_of_or_within
involved_in
IMP
IBA
(PMID:22573681) MGI
GO_Central
PMID:22573681 GO_REF:0000033 NCBI chr11:119,898,137...119,938,009
Ensembl chr11:119,898,139...119,937,993
JBrowse link
G Abcb6 ATP-binding cassette, sub-family B member 6 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:75,148,284...75,157,066
Ensembl chr 1:75,148,361...75,157,036
JBrowse link
G Abr active BCR-related gene acts_upstream_of_or_within IGI (PMID:11684658) MGI PMID:11684658 NCBI chr11:76,307,560...76,468,515
Ensembl chr11:76,307,560...76,514,384
JBrowse link
G Ache acetylcholinesterase ISO RGD PMID:20147288 RGD:405855864 NCBI chr 5:137,286,516...137,292,728
Ensembl chr 5:137,285,781...137,292,728
JBrowse link
G Adgrg1 adhesion G protein-coupled receptor G1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:95,701,321...95,740,836
Ensembl chr 8:95,701,379...95,740,845
JBrowse link
G Afg2a AFG2 AAA ATPase homolog A involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:37,474,052...37,633,245
Ensembl chr 3:37,474,045...37,633,245
JBrowse link
G Aim2 absent in melanoma 2 involved_in IDA (PMID:32350463) UniProt PMID:32350463 NCBI chr 1:173,177,105...173,293,606
Ensembl chr 1:173,178,445...173,293,606
JBrowse link
G Ak7 adenylate kinase 7 acts_upstream_of_or_within IMP (PMID:18776131)
(PMID:21746835)
MGI PMID:18776131 PMID:21746835 NCBI chr12:105,670,115...105,748,706
Ensembl chr12:105,672,235...105,748,706
JBrowse link
G Alk anaplastic lymphoma kinase acts_upstream_of_or_within IMP (PMID:17487225) MGI PMID:17487225 NCBI chr17:72,174,206...72,911,719
Ensembl chr17:72,175,967...72,911,622
JBrowse link
G Amigo1 adhesion molecule with Ig like domain 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:108,093,605...108,099,602
Ensembl chr 3:108,093,651...108,099,602
JBrowse link
G Amigo2 adhesion molecule with Ig like domain 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:97,141,955...97,145,168
Ensembl chr15:97,142,006...97,145,168
JBrowse link
G Amigo3 adhesion molecule with Ig like domain 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:107,930,358...107,932,900
Ensembl chr 9:107,930,358...107,932,900
JBrowse link
G Anapc7 anaphase promoting complex subunit 7 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:122,559,646...122,582,978
Ensembl chr 5:122,559,756...122,582,975
JBrowse link
G Apaf1 apoptotic peptidase activating factor 1 acts_upstream_of_or_within IMP (PMID:9753321) MGI PMID:9753321 NCBI chr10:90,825,173...90,918,688
Ensembl chr10:90,825,173...90,918,632
JBrowse link
G Apod apolipoprotein D involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr16:31,115,010...31,133,626
Ensembl chr16:31,115,010...31,133,626
JBrowse link
G Arl6 ADP-ribosylation factor-like 6 acts_upstream_of_or_within IMP (PMID:22139371) MGI PMID:22139371 NCBI chr16:59,433,312...59,459,772
Ensembl chr16:59,433,312...59,459,754
JBrowse link
G Arnt2 aryl hydrocarbon receptor nuclear translocator 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:83,895,486...84,059,201
Ensembl chr 7:83,895,486...84,059,384
JBrowse link
G Aspm abnormal spindle microtubule assembly acts_upstream_of_or_within IMP (PMID:20823249) MGI PMID:20823249 NCBI chr 1:139,381,450...139,421,826
Ensembl chr 1:139,382,510...139,421,829
JBrowse link
G Atm ataxia telangiectasia mutated acts_upstream_of_or_within IGI (PMID:16687486) MGI PMID:16687486 NCBI chr 9:53,348,422...53,448,125
Ensembl chr 9:53,350,449...53,448,040
JBrowse link
G Atoh1 atonal bHLH transcription factor 1 acts_upstream_of_or_within IMP (PMID:12223565) MGI PMID:12223565 NCBI chr 6:64,706,109...64,708,229
Ensembl chr 6:64,706,109...64,708,229
JBrowse link
G Atxn1 ataxin 1 involved_in IMP (MGI:5888926|PMID:28288114) UniProt PMID:28288114 MGI:5888926 NCBI chr13:45,703,231...46,118,467
Ensembl chr13:45,703,231...46,118,484
JBrowse link
G Atxn1l ataxin 1-like involved_in IMP (MGI:5888926|PMID:28288114) UniProt PMID:28288114 MGI:5888926 NCBI chr 8:110,453,083...110,464,426
Ensembl chr 8:110,453,083...110,464,371
JBrowse link
G B3glct beta-3-glucosyltransferase acts_upstream_of_or_within IMP (PMID:31600785) MGI PMID:31600785 NCBI chr 5:149,601,565...149,686,064
Ensembl chr 5:149,601,695...149,686,064
JBrowse link
G B4galt2 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2 acts_upstream_of_or_within IMP (PMID:19265195) MGI PMID:19265195 NCBI chr 4:117,730,211...117,740,724
Ensembl chr 4:117,726,457...117,740,684
JBrowse link
G Bag6 BCL2-associated athanogene 6 involved_in IMP (MGI:3703386|PMID:16287848) UniProt PMID:16287848 MGI:3703386 NCBI chr17:35,354,132...35,366,297
Ensembl chr17:35,354,154...35,366,298
JBrowse link
G Bbs7 Bardet-Biedl syndrome 7 acts_upstream_of_or_within IGI (PMID:22228099) MGI PMID:22228099 NCBI chr 3:36,627,291...36,667,639
Ensembl chr 3:36,627,291...36,667,626
JBrowse link
G Bcr BCR activator of RhoGEF and GTPase acts_upstream_of_or_within IGI (PMID:11684658) MGI PMID:11684658 NCBI chr10:74,896,384...75,020,753
Ensembl chr10:74,896,424...75,020,753
JBrowse link
G Bglap bone gamma carboxyglutamate protein involved_in IMP
IDA
(MGI:5544381|PMID:24074871)
(PMID:24074871)
UniProt PMID:24074871 MGI:5544381 NCBI chr 3:88,290,802...88,291,773
Ensembl chr 3:88,290,808...88,291,771
JBrowse link
G Bglap2 bone gamma-carboxyglutamate protein 2 involved_in IMP (MGI:5544381|PMID:24074871) UniProt PMID:24074871 MGI:5544381 NCBI chr 3:88,285,043...88,286,008
Ensembl chr 3:88,285,043...88,286,006
JBrowse link
G Bmi1 Bmi1 polycomb ring finger oncogene acts_upstream_of_or_within IMP (PMID:7926765) MGI PMID:7926765 NCBI chr 2:18,681,953...18,691,440
Ensembl chr 2:18,681,829...18,691,440
JBrowse link
G Bptf bromodomain PHD finger transcription factor involved_in NAS
ISO
(MGI:3690152|PMID:14609955) ComplexPortal
MGI
PMID:14609955 GO_REF:0000119 MGI:3690152 MGI:4834177 NCBI chr11:106,923,907...107,022,982
Ensembl chr11:106,923,907...107,022,953
JBrowse link
G Brca2 breast cancer 2, early onset acts_upstream_of_or_within IMP (PMID:17476307) MGI PMID:17476307 NCBI chr 5:150,445,759...150,493,612
Ensembl chr 5:150,446,095...150,493,794
JBrowse link
G Brinp1 bone morphogenic protein/retinoic acid inducible neural specific 1 involved_in IMP (MGI:5770105|PMID:27042284) UniProt PMID:27042284 MGI:5770105 NCBI chr 4:68,679,609...68,872,634
Ensembl chr 4:68,679,751...68,872,634
JBrowse link
G C2cd3 C2 calcium-dependent domain containing 3 acts_upstream_of_or_within IMP (PMID:19004860) MGI PMID:19004860 NCBI chr 7:100,021,440...100,119,366
Ensembl chr 7:100,021,440...100,119,359
JBrowse link
G Ccdc141 coiled-coil domain containing 141 involved_in IMP (MGI:6739960|PMID:34298015) UniProt PMID:34298015 MGI:6739960 NCBI chr 2:76,840,246...77,006,424
Ensembl chr 2:76,840,246...77,000,980
JBrowse link
G Ccdc39 coiled-coil domain containing 39 acts_upstream_of_or_within IMP (PMID:29317443) MGI PMID:29317443 NCBI chr 3:33,864,906...33,898,473
Ensembl chr 3:33,866,511...33,898,459
JBrowse link
G Cdk5r1 cyclin dependent kinase 5, regulatory subunit 1 involved_in IMP
IBA
(MGI:1347398|PMID:10545161) UniProt
GO_Central
PMID:10545161 GO_REF:0000033 MGI:1347398 NCBI chr11:80,367,849...80,372,010
Ensembl chr11:80,367,849...80,372,010
JBrowse link
G Cdk5r2 cyclin dependent kinase 5, regulatory subunit 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:74,894,188...74,896,891
Ensembl chr 1:74,894,093...74,896,891
JBrowse link
G Cdk5rap2 CDK5 regulatory subunit associated protein 2 involved_in IMP (MGI:4454588|PMID:20460369) UniProt PMID:20460369 MGI:4454588 NCBI chr 4:70,135,092...70,328,672
Ensembl chr 4:70,135,093...70,328,680
JBrowse link
G Cers1 ceramide synthase 1 acts_upstream_of_or_within IMP (PMID:15248193) MGI PMID:15248193 NCBI chr 8:70,768,425...70,784,238
Ensembl chr 8:70,768,425...70,784,242
JBrowse link
G Cfap43 cilia and flagella associated protein 43 acts_upstream_of_or_within IMP (PMID:31004071) MGI PMID:31004071 NCBI chr19:47,723,706...47,825,893
Ensembl chr19:47,725,296...47,907,726
JBrowse link
G Chd8 chromodomain helicase DNA binding protein 8 involved_in
acts_upstream_of_or_within
ISO
IBA
IMP
(PMID:27602517) MGI
GO_Central
PMID:27602517 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr14:52,435,608...52,495,499
Ensembl chr14:52,435,608...52,495,237
JBrowse link
G Cic capicua transcriptional repressor involved_in IMP (MGI:5888926|PMID:28288114) UniProt PMID:28288114 MGI:5888926 NCBI chr 7:24,967,054...24,993,584
Ensembl chr 7:24,967,129...24,993,584
JBrowse link
G Cited1 Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 involved_in IEP (MGI:3693257|PMID:17047318) UniProt PMID:17047318 MGI:3693257 NCBI chr  X:101,290,984...101,295,787
Ensembl chr  X:101,290,987...101,295,787
JBrowse link
G Cln5 ceroid-lipofuscinosis, neuronal 5 involved_in ISO (PMID:10992246) UniProt PMID:10992246 NCBI chr14:103,307,679...103,315,064
Ensembl chr14:103,307,652...103,315,064
JBrowse link
G Cntn1 contactin 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:91,949,034...92,239,834
Ensembl chr15:91,949,046...92,239,848
JBrowse link
G Cntn2 contactin 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:132,437,163...132,470,989
Ensembl chr 1:132,437,165...132,470,994
JBrowse link
G Cntn4 contactin 4 involved_in ISO PMID:8586965 UniProt PMID:8586965 RGD:631992 NCBI chr 6:105,654,505...106,677,102
Ensembl chr 6:105,654,621...106,676,271
JBrowse link
G Col4a1 collagen, type IV, alpha 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:11,248,423...11,362,889
Ensembl chr 8:11,248,423...11,362,826
JBrowse link
G Ctns cystinosis, nephropathic involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:73,073,959...73,089,869
Ensembl chr11:73,074,422...73,089,868
JBrowse link
G Cwh43 cell wall biogenesis 43 C-terminal homolog acts_upstream_of_or_within IMP (PMID:33459505) MGI PMID:33459505 NCBI chr 5:73,563,394...73,610,778
Ensembl chr 5:73,563,418...73,610,778
JBrowse link
G Cx3cr1 C-X3-C motif chemokine receptor 1 involved_in IMP (MGI:5287328|PMID:21778362) UniProt PMID:21778362 MGI:5287328 NCBI chr 9:119,877,749...119,897,362
Ensembl chr 9:119,877,749...119,898,945
JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 acts_upstream_of_or_within IDA (PMID:12183377) MGI PMID:12183377 NCBI chr 6:117,145,496...117,158,329
Ensembl chr 6:117,145,496...117,158,328
JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 involved_in
acts_upstream_of_or_within
IBA
IMP
(PMID:12183377) GO_Central
MGI
PMID:12183377 GO_REF:0000033 NCBI chr 1:128,515,936...128,520,036
Ensembl chr 1:128,515,936...128,520,030
JBrowse link
G Dclk1 doublecortin-like kinase 1 acts_upstream_of_or_within IGI (PMID:16387638) MGI PMID:16387638 NCBI chr 3:55,149,724...55,446,489
Ensembl chr 3:55,149,785...55,446,489
JBrowse link
G Dcx doublecortin acts_upstream_of_or_within IGI (PMID:16387638) MGI PMID:16387638 NCBI chr  X:142,638,838...142,716,392
Ensembl chr  X:142,638,838...142,716,307
JBrowse link
G Ddit4 DNA-damage-inducible transcript 4 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr10:59,785,497...59,787,592
Ensembl chr10:59,785,491...59,787,656
JBrowse link
G Dhx37 DEAH-box helicase 37 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:125,490,811...125,511,203
Ensembl chr 5:125,490,922...125,511,185
JBrowse link
G Diaph1 diaphanous related formin 1 involved_in IMP (MGI:5707577|PMID:24781755) UniProt PMID:24781755 MGI:5707577 NCBI chr18:37,976,654...38,068,573
Ensembl chr18:37,976,654...38,068,529
JBrowse link
G Dmbx1 diencephalon/mesencephalon homeobox 1 involved_in IEP (MGI:3054504|PMID:15314164) UniProt PMID:15314164 MGI:3054504 NCBI chr 4:115,772,316...115,797,794
Ensembl chr 4:115,772,316...115,797,123
JBrowse link
G Dmxl2 Dmx-like 2 acts_upstream_of_or_within IMP (PMID:29078390) MGI PMID:29078390 NCBI chr 9:54,272,442...54,409,150
Ensembl chr 9:54,272,442...54,408,910
JBrowse link
G Dnajc30 DnaJ heat shock protein family (Hsp40) member C30 involved_in IMP (MGI:6245118|PMID:30318146) UniProt PMID:30318146 MGI:6245118 NCBI chr 5:135,093,060...135,094,219
Ensembl chr 5:135,093,056...135,094,716
JBrowse link
G Dscaml1 DS cell adhesion molecule like 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:45,338,735...45,665,011
Ensembl chr 9:45,337,926...45,665,010
JBrowse link
G Eml1 echinoderm microtubule associated protein like 1 involved_in IMP
ISO
(MGI:5574528|PMID:24859200) UniProt
MGI
PMID:24859200 GO_REF:0000119 MGI:4834177 MGI:5574528 NCBI chr12:108,337,265...108,505,835
Ensembl chr12:108,337,216...108,505,876
JBrowse link
G Emx1 empty spiracles homeobox 1 involved_in
acts_upstream_of_or_within
IBA
IMP
(PMID:12091317)
(PMID:12561075)
GO_Central
MGI
PMID:12091317 PMID:12561075 GO_REF:0000033 NCBI chr 6:85,164,913...85,181,445
Ensembl chr 6:85,164,420...85,181,444
JBrowse link
G Emx2 empty spiracles homeobox 2 acts_upstream_of_or_within
involved_in
IMP
IBA
(PMID:12196586), (PMID:12209834), (PMID:12561075)
(PMID:12091317)
MGI
GO_Central
PMID:12091317 PMID:12196586 PMID:12209834 PMID:12561075 GO_REF:0000033 NCBI chr19:59,447,122...59,453,789
Ensembl chr19:59,446,804...59,453,789
JBrowse link
G Eomes eomesodermin involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:118,307,259...118,315,176
Ensembl chr 9:118,307,280...118,315,200
JBrowse link
G Epha7 Eph receptor A7 involved_in IMP (MGI:3582020|PMID:15902206) UniProt PMID:15902206 MGI:3582020 NCBI chr 4:28,811,840...28,969,391
Ensembl chr 4:28,813,131...28,967,499
JBrowse link
G Epor erythropoietin receptor acts_upstream_of_or_within IMP (PMID:11807041) MGI PMID:11807041 NCBI chr 9:21,870,193...21,874,915
Ensembl chr 9:21,870,193...21,874,802
JBrowse link
G Esr2 estrogen receptor 2 (beta) acts_upstream_of_or_within IMP (PMID:12515851) MGI PMID:12515851 NCBI chr12:76,167,193...76,224,033
Ensembl chr12:76,167,193...76,224,033
JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within
acts_upstream_of_or_within_positive_effect
IMP (PMID:14605369) MGI PMID:14605369 NCBI chr15:52,931,657...53,209,579
Ensembl chr15:52,927,434...53,209,555
JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 acts_upstream_of_or_within IMP (PMID:12682014) MGI PMID:12682014 NCBI chr 8:26,008,808...26,067,819
Ensembl chr 8:26,003,670...26,065,734
JBrowse link
G Fkrp fukutin related protein acts_upstream_of_or_within IMP (PMID:23591631)
(PMID:20675713)
(PMID:26306834)
MGI PMID:20675713 PMID:23591631 PMID:26306834 NCBI chr 7:16,543,192...16,550,657
Ensembl chr 7:16,543,171...16,550,657
JBrowse link
G Fktn fukutin acts_upstream_of_or_within IDA
IMP
(PMID:29360985) MGI PMID:29360985 NCBI chr 4:53,713,745...53,765,785
Ensembl chr 4:53,713,998...53,777,890
JBrowse link
G Flvcr2 feline leukemia virus subgroup C cellular receptor 2 acts_upstream_of_or_within IMP (PMID:32369453) MGI PMID:32369453 NCBI chr12:85,793,313...85,860,359
Ensembl chr12:85,793,313...85,860,359
JBrowse link
G Foxc1 forkhead box C1 acts_upstream_of_or_within IMP (PMID:4784576), (PMID:5500588)
(PMID:9635428)
MGI PMID:4784576 PMID:5500588 PMID:9635428 NCBI chr13:31,990,629...31,994,618
Ensembl chr13:31,990,616...31,996,459
JBrowse link
G Foxj1 forkhead box J1 involved_in IEP (MGI:86662|PMID:9096351) BHF-UCL PMID:9096351 MGI:86662 NCBI chr11:116,221,530...116,226,331
Ensembl chr11:116,221,530...116,226,225
JBrowse link
G Foxr1 forkhead box R1 involved_in IMP (MGI:6792271|PMID:34723967) UniProt PMID:34723967 MGI:6792271 NCBI chr 9:44,345,531...44,352,165
Ensembl chr 9:44,345,070...44,352,433
JBrowse link
G Gabrb3 GABRB3, gamma-aminobutyric acid type A receptor subunit beta 3 acts_upstream_of_or_within IMP (PMID:16168624) MGI PMID:16168624 NCBI chr 7:57,240,266...57,478,550
Ensembl chr 7:57,069,440...57,478,550
JBrowse link
G Gas8 growth arrest specific 8 acts_upstream_of_or_within IMP (PMID:27472056) MGI PMID:27472056 NCBI chr 8:124,245,630...124,263,394
Ensembl chr 8:124,245,573...124,263,389
JBrowse link
G Git1 GIT ArfGAP 1 involved_in IMP
IBA
(MGI:6478058|PMID:25792865) UniProt
GO_Central
PMID:25792865 GO_REF:0000033 MGI:6478058 NCBI chr11:77,384,114...77,398,600
Ensembl chr11:77,384,388...77,398,612
JBrowse link
G Git2 GIT ArfGAP 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:114,865,469...114,912,647
Ensembl chr 5:114,865,468...114,913,578
JBrowse link
G Gli3 GLI-Kruppel family member GLI3 acts_upstream_of_or_within IMP (PMID:12435361), (PMID:17395647)
(PMID:8026071)
MGI PMID:8026071 PMID:12435361 PMID:17395647 NCBI chr13:15,638,308...15,904,611
Ensembl chr13:15,637,820...15,904,611
JBrowse link
G Gpr158 G protein-coupled receptor 158 involved_in IDA (PMID:28851741) UniProt PMID:28851741 NCBI chr 2:21,372,378...21,835,355
Ensembl chr 2:21,372,353...21,835,358
JBrowse link
G Grhl2 grainyhead like transcription factor 2 acts_upstream_of_or_within
involved_in
IMP
IBA
(PMID:21377456) MGI
GO_Central
PMID:21377456 GO_REF:0000033 NCBI chr15:37,233,065...37,363,813
Ensembl chr15:37,233,280...37,363,813
JBrowse link
G Gsx2 GS homeobox 2 acts_upstream_of_or_within IGI (PMID:12930780) MGI PMID:12930780 NCBI chr 5:75,236,262...75,238,554
Ensembl chr 5:75,236,262...75,238,554
JBrowse link
G Herc1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 acts_upstream_of_or_within IMP (PMID:29078390) MGI PMID:29078390 NCBI chr 9:66,257,694...66,416,057
Ensembl chr 9:66,257,732...66,416,057
JBrowse link
G Hes5 hes family bHLH transcription factor 5 involved_in IMP (MGI:3703278|PMID:17331197) UniProt PMID:17331197 MGI:3703278 NCBI chr 4:155,042,358...155,046,829
Ensembl chr 4:155,045,380...155,046,828
JBrowse link
G Hesx1 homeobox gene expressed in ES cells acts_upstream_of_or_within IMP (PMID:11291863) MGI PMID:11291863 NCBI chr14:26,716,322...26,724,286
Ensembl chr14:26,716,373...26,724,286
JBrowse link
G Hmx2 H6 homeobox 2 acts_upstream_of_or_within IGI (PMID:15363417) MGI PMID:15363417 NCBI chr 7:131,150,486...131,159,743
Ensembl chr 7:131,150,502...131,159,743
JBrowse link
G Hmx3 H6 homeobox 3 acts_upstream_of_or_within IGI (PMID:15363417) MGI PMID:15363417 NCBI chr 7:131,143,263...131,147,756
Ensembl chr 7:131,144,596...131,146,654
JBrowse link
G Hsd17b7 hydroxysteroid (17-beta) dehydrogenase 7 involved_in IMP (MGI:3811685|PMID:18669642) UniProt PMID:18669642 MGI:3811685 NCBI chr 1:169,777,109...169,796,757
Ensembl chr 1:169,777,104...169,796,810
JBrowse link
G Hspg2 perlecan (heparan sulfate proteoglycan 2) acts_upstream_of_or_within IMP (PMID:10579729) MGI PMID:10579729 NCBI chr 4:137,196,062...137,297,941
Ensembl chr 4:137,196,080...137,297,941
JBrowse link
G Htt huntingtin acts_upstream_of_or_within IMP (PMID:16978870) MGI PMID:16978870 NCBI chr 5:34,919,084...35,069,878
Ensembl chr 5:34,919,084...35,069,878
JBrowse link
G Hydin HYDIN, axonemal central pair apparatus protein acts_upstream_of_or_within IMP (PMID:26234751) MGI PMID:26234751 MGI:71926 NCBI chr 8:110,993,600...111,336,885
Ensembl chr 8:110,993,609...111,336,885
JBrowse link
G Id4 inhibitor of DNA binding 4 acts_upstream_of_or_within IMP (PMID:15469968) MGI PMID:15469968 NCBI chr13:48,414,592...48,419,504
Ensembl chr13:48,414,704...48,419,502
JBrowse link
G Ier3ip1 immediate early response 3 interacting protein 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr18:77,017,723...77,029,310
Ensembl chr18:77,017,713...77,029,308
JBrowse link
G Ift172 intraflagellar transport 172 acts_upstream_of_or_within IMP (PMID:18930042) MGI PMID:18930042 NCBI chr 5:31,410,623...31,448,458
Ensembl chr 5:31,410,621...31,448,460
JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within IMP
IGI
(PMID:19036983)
(PMID:22228099)
MGI PMID:19036983 PMID:22228099 NCBI chr14:57,661,519...57,755,393
Ensembl chr14:57,661,519...57,755,393
JBrowse link
G Igf1r insulin-like growth factor I receptor acts_upstream_of_or_within IMP (PMID:12904469) MGI PMID:12904469 NCBI chr 7:67,601,486...67,883,416
Ensembl chr 7:67,602,575...67,883,416
JBrowse link
G Immp2l IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) acts_upstream_of_or_within IMP (PMID:21824519) MGI PMID:21824519 NCBI chr12:41,074,060...42,002,371
Ensembl chr12:41,074,089...42,002,371
JBrowse link
G Irs2 insulin receptor substrate 2 acts_upstream_of_or_within IMP (PMID:12904469) MGI PMID:12904469 NCBI chr 8:11,034,681...11,058,929
Ensembl chr 8:11,034,681...11,058,458
JBrowse link
G Jhy junctional cadherin complex regulator involved_in
acts_upstream_of_or_within
IBA
IMP
(PMID:23906841) GO_Central
MGI
PMID:23906841 GO_REF:0000033 NCBI chr 9:40,806,147...40,877,560
Ensembl chr 9:40,806,145...40,875,414
JBrowse link
G Kcna1 potassium voltage-gated channel, shaker-related subfamily, member 1 involved_in IMP (MGI:5297001|PMID:21966978) UniProt PMID:21966978 MGI:5297001 NCBI chr 6:126,613,426...126,622,764
Ensembl chr 6:126,617,360...126,623,347
JBrowse link
G Kcnq2 potassium voltage-gated channel, subfamily Q, member 2 acts_upstream_of_or_within IMP (PMID:30382937) MGI PMID:30382937 NCBI chr 2:180,717,372...180,777,368
Ensembl chr 2:180,717,372...180,777,093
JBrowse link
G Kdm4b lysine (K)-specific demethylase 4B involved_in IMP (MGI:6101669|PMID:27023172) UniProt PMID:27023172 MGI:6101669 NCBI chr17:56,632,975...56,710,774
Ensembl chr17:56,633,062...56,709,870
JBrowse link
G Kif21b kinesin family member 21B acts_upstream_of_or_within IMP (PMID:29078390) MGI PMID:29078390 NCBI chr 1:136,059,128...136,105,739
Ensembl chr 1:136,059,127...136,105,736
JBrowse link
G Large1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within IMP
IDA
(PMID:26306834), (PMID:29360985)
(PMID:29360985)
MGI PMID:26306834 PMID:29360985 NCBI chr 8:73,541,227...74,080,164
Ensembl chr 8:73,541,227...74,080,168
JBrowse link
G Lhx2 LIM homeobox protein 2 acts_upstream_of_or_within IMP (PMID:14566948), (PMID:15295034) MGI PMID:14566948 PMID:15295034 NCBI chr 2:38,229,282...38,259,747
Ensembl chr 2:38,229,293...38,259,745
JBrowse link
G Llgl1 LLGL1 scribble cell polarity complex component involved_in TAS (MGI:78468|PMID:8565641) UniProt PMID:8565641 MGI:78468 NCBI chr11:60,590,501...60,605,012
Ensembl chr11:60,590,549...60,605,012
JBrowse link
G Maco1 macoilin 1 involved_in IEP (MGI:3052424|PMID:15255972) BHF-UCL PMID:15255972 MGI:3052424 NCBI chr 4:134,530,070...134,581,242
Ensembl chr 4:134,530,070...134,580,656
JBrowse link
G Macrod2 mono-ADP ribosylhydrolase 2 involved_in IEP (MGI:4887328|PMID:17586838) UniProt PMID:17586838 MGI:4887328 NCBI chr 2:140,237,223...142,234,886
Ensembl chr 2:140,237,229...142,234,886
JBrowse link
G Macroh2a2 macroH2A.2 histone involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:61,574,419...61,620,383
Ensembl chr10:61,574,444...61,619,926
JBrowse link
G Map1s microtubule-associated protein 1S involved_in IEP (MGI:3529608|PMID:15528209) HGNC-UCL PMID:15528209 MGI:3529608 NCBI chr 8:71,358,618...71,370,173
Ensembl chr 8:71,358,576...71,370,173
JBrowse link
G Mast1 microtubule associated serine/threonine kinase 1 involved_in IMP
ISO
(MGI:6269299|PMID:30449657) UniProt
MGI
PMID:30449657 GO_REF:0000119 MGI:4834177 MGI:6269299 NCBI chr 8:85,638,482...85,672,811
Ensembl chr 8:85,638,532...85,663,988
JBrowse link
G Matcap1 microtubule associated tyrosine carboxypeptidase 1 involved_in IMP (MGI:7285999|PMID:35482892) UniProt PMID:35482892 MGI:7285999 NCBI chr 8:106,007,041...106,016,160
Ensembl chr 8:106,007,041...106,016,496
JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in ISO PMID:15019943 HGNC-UCL PMID:15019943 RGD:8554528 NCBI chr17:30,046,930...30,107,557
Ensembl chr17:30,046,923...30,189,061
JBrowse link
G Mecp2 methyl CpG binding protein 2 acts_upstream_of_or_within IMP (PMID:18571096) MGI PMID:18571096 NCBI chr  X:73,070,198...73,129,296
Ensembl chr  X:73,070,198...73,129,296
JBrowse link
G Med1 mediator complex subunit 1 acts_upstream_of_or_within IMP (PMID:10882104) MGI PMID:10882104 NCBI chr11:98,042,980...98,084,121
Ensembl chr11:98,042,980...98,084,119
JBrowse link
G Meis1 Meis homeobox 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:18,830,428...18,968,992
Ensembl chr11:18,829,817...18,968,985
JBrowse link
G Meis2 Meis homeobox 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:115,691,745...115,897,925
Ensembl chr 2:115,693,545...115,896,320
JBrowse link
G Meis3 Meis homeobox 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:15,908,684...15,920,435
Ensembl chr 7:15,909,015...15,920,429
JBrowse link
G Met met proto-oncogene acts_upstream_of_or_within IMP (PMID:12397180) MGI PMID:12397180 NCBI chr 6:17,463,351...17,573,979
Ensembl chr 6:17,463,799...17,573,979
JBrowse link
G Mfsd2a MFSD2 lysolipid transporter A, lysophospholipid acts_upstream_of
acts_upstream_of_or_within
IMP
ISO
(MGI:6196220|PMID:30074985) ARUK-UCL
MGI
PMID:30074985 GO_REF:0000119 MGI:4834177 MGI:6196220 NCBI chr 4:122,840,643...122,855,844
Ensembl chr 4:122,840,643...122,854,981
JBrowse link
G Mink1 misshapen-like kinase 1 (zebrafish) involved_in IEP (MGI:1354211|PMID:10708748) UniProt PMID:10708748 MGI:1354211 NCBI chr11:70,452,272...70,505,309
Ensembl chr11:70,453,707...70,505,309
JBrowse link
G Myh10 myosin, heavy polypeptide 10, non-muscle acts_upstream_of_or_within IMP (PMID:16481398) MGI PMID:16481398 NCBI chr11:68,581,228...68,707,451
Ensembl chr11:68,582,385...68,707,458
JBrowse link
G Napa N-ethylmaleimide sensitive fusion protein attachment protein alpha acts_upstream_of_or_within IMP (PMID:11706940) MGI PMID:11706940 NCBI chr 7:15,832,127...15,851,907
Ensembl chr 7:15,832,383...15,851,900
JBrowse link
G Ncoa6 nuclear receptor coactivator 6 acts_upstream_of_or_within IMP (PMID:12556486) MGI PMID:12556486 NCBI chr 2:155,232,585...155,315,741
Ensembl chr 2:155,232,576...155,315,814
JBrowse link
G Ndufs4 NADH:ubiquinone oxidoreductase core subunit S4 involved_in
acts_upstream_of_or_within
ISO
IMP
(PMID:28916769) MGI PMID:28916769 GO_REF:0000119 MGI:4834177 NCBI chr13:114,424,331...114,524,630
Ensembl chr13:114,424,331...114,524,794
JBrowse link
G Negr1 neuronal growth regulator 1 acts_upstream_of_or_within IMP (PMID:30932003) MGI PMID:30932003 NCBI chr 3:156,266,082...157,022,101
Ensembl chr 3:156,267,431...157,022,082
JBrowse link
G Nf1 neurofibromin 1 acts_upstream_of_or_within IMP (PMID:10419687) MGI PMID:10419687 NCBI chr11:79,223,541...79,472,435
Ensembl chr11:79,230,519...79,472,438
JBrowse link
G Nf2 neurofibromin 2 acts_upstream_of_or_within IMP (PMID:23863479) MGI PMID:23863479 NCBI chr11:4,715,845...4,799,544
Ensembl chr11:4,715,845...4,799,536
JBrowse link
G Nfasc neurofascin involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:132,492,428...132,669,567
Ensembl chr 1:132,492,428...132,669,535
JBrowse link
G Nfib nuclear factor I/B involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:82,208,410...82,424,988
Ensembl chr 4:82,208,410...82,623,987
JBrowse link
G Nfix nuclear factor I/X involved_in IMP (PMID:18477394), (PMID:23964093)
(PMID:17353270)
MGI PMID:17353270 PMID:18477394 PMID:23964093 NCBI chr 8:85,431,341...85,527,086
Ensembl chr 8:85,426,505...85,526,973
JBrowse link
G Nipbl NIPBL cohesin loading factor involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr15:8,319,308...8,494,799
Ensembl chr15:8,320,101...8,473,947
JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in
acts_upstream_of_or_within
ISO
IGI
IMP
(PMID:12930780)
(PMID:8557195)
MGI PMID:8557195 PMID:12930780 GO_REF:0000119 MGI:4834177 NCBI chr12:56,578,741...56,583,570
Ensembl chr12:56,578,743...56,583,693
JBrowse link
G Nme7 NME/NM23 family member 7 acts_upstream_of_or_within IMP (PMID:21746835) MGI PMID:21746835 NCBI chr 1:164,135,091...164,264,870
Ensembl chr 1:164,131,690...164,265,294
JBrowse link
G Nnat neuronatin involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 2:157,401,936...157,404,445
Ensembl chr 2:157,401,998...157,404,442
JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within IMP (PMID:11311163) MGI PMID:11311163 NCBI chr10:61,253,751...61,261,117
Ensembl chr10:61,253,751...61,261,117
JBrowse link
G Nog noggin acts_upstream_of_or_within IMP (PMID:12397106) MGI PMID:12397106 NCBI chr11:89,191,464...89,193,385
Ensembl chr11:89,191,464...89,193,158
JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within IMP (PMID:14994267) MGI PMID:14994267 NCBI chr10:42,437,959...42,459,721
Ensembl chr10:42,437,959...42,459,628
JBrowse link
G Ntf3 neurotrophin 3 acts_upstream_of_or_within IMP (PMID:10195193) MGI PMID:10195193 NCBI chr 6:126,078,375...126,143,703
Ensembl chr 6:126,078,375...126,143,873
JBrowse link
G Odad3 outer dynein arm docking complex subunit 3 acts_upstream_of_or_within IMP (PMID:31383820) MGI PMID:31383820 NCBI chr 9:21,901,167...21,914,268
Ensembl chr 9:21,901,167...21,913,930
JBrowse link
G Odad4 outer dynein arm complex subunit 4 acts_upstream_of
acts_upstream_of_or_within
IMP (PMID:27486780) MGI PMID:27486780 NCBI chr11:100,436,434...100,463,392
Ensembl chr11:100,436,433...100,463,394
JBrowse link
G Pax6 paired box 6 acts_upstream_of_or_within IMP (PMID:10409504), (PMID:12196586) MGI PMID:10409504 PMID:12196586 NCBI chr 2:105,499,241...105,528,755
Ensembl chr 2:105,499,245...105,527,709
JBrowse link
G Pbx1 pre B cell leukemia homeobox 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:167,946,933...168,259,898
Ensembl chr 1:167,946,933...168,259,839
JBrowse link
G Pbx2 pre B cell leukemia homeobox 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:34,811,233...34,816,374
Ensembl chr17:34,810,240...34,816,374
JBrowse link
G Pbx3 pre B cell leukemia homeobox 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:34,061,469...34,264,168
Ensembl chr 2:34,061,469...34,263,154
JBrowse link
G Pbx4 pre B cell leukemia homeobox 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:70,285,127...70,324,942
Ensembl chr 8:70,285,141...70,324,942
JBrowse link
G Pcdh18 protocadherin 18 involved_in IEP (MGI:2154581|PMID:11716507) UniProt PMID:11716507 MGI:2154581 NCBI chr 3:49,697,745...49,711,723
Ensembl chr 3:49,697,745...49,711,774
JBrowse link
G Plcb1 phospholipase C, beta 1 involved_in NAS (MGI:4943665|PMID:18493969) BHF-UCL PMID:18493969 MGI:4943665 NCBI chr 2:134,628,084...135,317,178
Ensembl chr 2:134,627,987...135,317,178
JBrowse link
G Plxnb2 plexin B2 involved_in IMP (MGI:3712712|PMID:17554007) UniProt PMID:17554007 MGI:3712712 NCBI chr15:89,039,752...89,064,960
Ensembl chr15:89,039,752...89,064,991
JBrowse link
G Pomgnt1 protein O-linked mannose beta 1,2-N-acetylglucosaminyltransferase acts_upstream_of_or_within IMP (PMID:26306834) MGI PMID:26306834 NCBI chr 4:116,007,700...116,017,041
Ensembl chr 4:115,981,037...116,017,046
JBrowse link
G Pomk protein-O-mannose kinase acts_upstream_of_or_within IMP (PMID:21746835) MGI PMID:21746835 NCBI chr 8:26,470,632...26,484,149
Ensembl chr 8:26,470,632...26,484,161
JBrowse link
G Pou3f1 POU domain, class 3, transcription factor 1 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 4:124,551,439...124,554,448
Ensembl chr 4:124,550,600...124,554,448
JBrowse link
G Pou3f2 POU domain, class 3, transcription factor 2 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 4:22,482,095...22,488,366
Ensembl chr 4:22,482,780...22,488,366
JBrowse link
G Pou3f3 POU domain, class 3, transcription factor 3 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 1:42,734,928...42,739,370
Ensembl chr 1:42,734,085...42,742,336
JBrowse link
G Pou3f4 POU domain, class 3, transcription factor 4 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr  X:109,857,985...109,862,714
Ensembl chr  X:109,857,886...109,860,813
JBrowse link
G Ppt1 palmitoyl-protein thioesterase 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:122,729,879...122,752,968
Ensembl chr 4:122,730,035...122,752,968
JBrowse link
G Prkdc protein kinase, DNA activated, catalytic polypeptide acts_upstream_of_or_within IGI (PMID:16687486) MGI PMID:16687486 NCBI chr16:15,455,698...15,660,103
Ensembl chr16:15,455,730...15,660,099
JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (PMID:8812486) BHF-UCL PMID:8812486 NCBI chr 1:189,850,232...189,903,024
Ensembl chr 1:189,850,232...189,902,911
JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within IMP (PMID:9153393) MGI PMID:9153393 NCBI chr12:83,734,926...83,781,869
Ensembl chr12:83,734,926...83,781,973
JBrowse link
G Ptch1 patched 1 involved_in IMP (MGI:5142377|PMID:11517919) BHF-UCL PMID:11517919 MGI:5142377 NCBI chr13:63,656,142...63,721,274
Ensembl chr13:63,656,142...63,721,412
JBrowse link
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:121,268,596...121,329,460
Ensembl chr 5:121,268,596...121,329,460
JBrowse link
G Pygo2 pygopus 2 acts_upstream_of_or_within IMP (PMID:17425782) MGI PMID:17425782 NCBI chr 3:89,337,521...89,342,438
Ensembl chr 3:89,337,521...89,342,435
JBrowse link
G Qars1 glutaminyl-tRNA synthetase 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:108,385,204...108,393,140
Ensembl chr 9:108,384,905...108,393,140
JBrowse link
G Rab3gap1 RAB3 GTPase activating protein subunit 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:127,796,492...127,871,612
Ensembl chr 1:127,796,510...127,871,605
JBrowse link
G Rax retina and anterior neural fold homeobox acts_upstream_of_or_within IMP (PMID:15789424) MGI PMID:15789424 NCBI chr18:66,067,710...66,072,160
Ensembl chr18:66,061,348...66,072,858
JBrowse link
G Rbbp4 retinoblastoma binding protein 4, chromatin remodeling factor involved_in NAS (MGI:3690152|PMID:14609955) ComplexPortal PMID:14609955 MGI:3690152 NCBI chr 4:129,200,893...129,229,163
Ensembl chr 4:129,200,893...129,229,163
JBrowse link
G Rbbp7 retinoblastoma binding protein 7, chromatin remodeling factor involved_in NAS (MGI:3690152|PMID:14609955) ComplexPortal PMID:14609955 MGI:3690152 NCBI chr  X:161,543,368...161,562,086
Ensembl chr  X:161,543,398...161,562,088
JBrowse link
G Reln reelin acts_upstream_of_or_within IMP (PMID:12223565) MGI PMID:12223565 NCBI chr 5:22,089,452...22,549,703
Ensembl chr 5:22,089,452...22,549,700
JBrowse link
G Robo2 roundabout guidance receptor 2 involved_in ISO (PMID:10197527) UniProt PMID:10197527 NCBI chr16:73,688,725...75,244,331
Ensembl chr16:73,688,727...74,889,765
JBrowse link
G Rogdi rogdi homolog involved_in
acts_upstream_of_or_within
ISO
IMP
(PMID:38172607) MGI PMID:38172607 GO_REF:0000119 MGI:4834177 NCBI chr16:4,826,593...4,831,438
Ensembl chr16:4,826,594...4,831,417
JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within IMP (PMID:17553904), (PMID:17558409) MGI PMID:17553904 PMID:17558409 NCBI chr 8:91,943,658...92,039,919
Ensembl chr 8:91,943,658...92,039,890
JBrowse link
G Rtn1 reticulon 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:72,258,523...72,455,828
Ensembl chr12:72,258,526...72,455,828
JBrowse link
G Rtn3 reticulon 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr19:7,403,260...7,460,656
Ensembl chr19:7,403,266...7,460,646
JBrowse link
G Rtn4 reticulon 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:29,642,898...29,694,414
Ensembl chr11:29,642,947...29,694,331
JBrowse link
G S1pr1 sphingosine-1-phosphate receptor 1 acts_upstream_of_or_within IMP (PMID:16314531) MGI PMID:16314531 NCBI chr 3:115,504,082...115,508,704
Ensembl chr 3:115,504,082...115,508,721
JBrowse link
G Sct secretin involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:140,858,243...140,859,082
Ensembl chr 7:140,858,243...140,859,046
JBrowse link
G Scyl2 SCY1-like 2 (S. cerevisiae) involved_in IDA (MGI:5694521|PMID:26203146) UniProt PMID:26203146 MGI:5694521 NCBI chr10:89,474,582...89,522,179
Ensembl chr10:89,474,583...89,522,147
JBrowse link
G Selenop selenoprotein P acts_upstream_of_or_within IMP (PMID:14704310) MGI PMID:14704310 NCBI chr15:3,300,249...3,309,992
Ensembl chr15:3,298,029...3,309,990
JBrowse link
G Septin4 septin 4 acts_upstream_of_or_within IMP (PMID:16314519) MGI PMID:16314519 NCBI chr11:87,457,515...87,481,365
Ensembl chr11:87,457,479...87,481,365
JBrowse link
G Setd1a SET domain containing 1A involved_in IMP
ISO
(MGI:6467717|PMID:31197650) UniProt
MGI
PMID:31197650 GO_REF:0000119 MGI:4834177 MGI:6467717 NCBI chr 7:127,376,561...127,399,294
Ensembl chr 7:127,375,842...127,399,294
JBrowse link
G Shroom2 shroom family member 2 involved_in ISS (MGI:3710716|PMID:16987870) UniProt PMID:16987870 MGI:3710716 NCBI chr  X:151,392,505...151,553,784
Ensembl chr  X:151,392,505...151,552,461
JBrowse link
G Shroom4 shroom family member 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr  X:6,312,012...6,549,508
Ensembl chr  X:6,311,908...6,549,502
JBrowse link
G Six3 sine oculis-related homeobox 3 involved_in
acts_upstream_of_or_within
IBA
IMP
(PMID:12569128) GO_Central
MGI
PMID:12569128 GO_REF:0000033 NCBI chr17:85,921,036...85,933,619
Ensembl chr17:85,921,036...85,936,730
JBrowse link
G Slc1a1 solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 involved_in IMP (PMID:28886095) MGI PMID:28886095 NCBI chr19:28,812,535...28,891,360
Ensembl chr19:28,812,449...28,891,360
JBrowse link
G Slc23a1 solute carrier family 23 (nucleobase transporters), member 1 involved_in IMP (MGI:2178849|PMID:11984597) UniProt PMID:11984597 MGI:2178849 NCBI chr18:35,747,657...35,762,900
Ensembl chr18:35,747,657...35,760,297
JBrowse link
G Slc6a17 solute carrier family 6 (neurotransmitter transporter), member 17 involved_in IDA (MGI:5634854|PMID:25704603) UniProt PMID:25704603 MGI:5634854 NCBI chr 3:107,374,864...107,425,334
Ensembl chr 3:107,374,859...107,425,334
JBrowse link
G Slc7a11 solute carrier family 7 (cationic amino acid transporter, y+ system), member 11 acts_upstream_of_or_within IMP (PMID:17035536) MGI PMID:17035536 NCBI chr 3:50,319,385...50,403,947
Ensembl chr 3:49,846,975...50,398,063
JBrowse link
G Smarca1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 involved_in
acts_upstream_of_or_within
NAS
IMP
ISO
(MGI:3690152|PMID:14609955)
(PMID:22516202)
ComplexPortal
MGI
PMID:14609955 PMID:22516202 GO_REF:0000119 MGI:3690152 MGI:4834177 NCBI chr  X:46,898,247...46,981,490
Ensembl chr  X:46,898,245...46,981,851
JBrowse link
G Smg9 SMG9 nonsense mediated mRNA decay factor involved_in IMP (MGI:5775676|PMID:27018474) UniProt PMID:27018474 MGI:5775676 NCBI chr 7:24,099,106...24,122,197
Ensembl chr 7:24,099,044...24,122,203
JBrowse link
G Sox1 SRY (sex determining region Y)-box 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:12,445,519...12,449,555
Ensembl chr 8:12,445,295...12,450,126
JBrowse link
G Sox11 SRY (sex determining region Y)-box 11 involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:27,384,267...27,392,717
Ensembl chr12:27,384,263...27,392,573
JBrowse link
G Sox12 SRY (sex determining region Y)-box 12 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:152,235,531...152,239,966
Ensembl chr 2:152,235,531...152,239,983
JBrowse link
G Sox14 SRY (sex determining region Y)-box 14 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:99,756,159...99,758,223
Ensembl chr 9:99,756,159...99,758,223
JBrowse link
G Sox15 SRY (sex determining region Y)-box 15 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:69,545,863...69,547,553
Ensembl chr11:69,546,140...69,547,553
JBrowse link
G Sox2 SRY (sex determining region Y)-box 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:34,704,144...34,706,610
Ensembl chr 3:34,704,554...34,706,610
JBrowse link
G Sox21 SRY (sex determining region Y)-box 21 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:118,470,645...118,474,442
Ensembl chr14:118,470,644...118,474,442
JBrowse link
G Sox3 SRY (sex determining region Y)-box 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:59,934,972...59,937,045
Ensembl chr  X:59,934,972...59,937,036
JBrowse link
G Sox4 SRY (sex determining region Y)-box 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:29,132,902...29,137,682
Ensembl chr13:29,132,902...29,137,696
JBrowse link
G Sox6 SRY (sex determining region Y)-box 6 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:115,070,107...115,639,186
Ensembl chr 7:115,070,107...115,638,031
JBrowse link
G Sphk1 sphingosine kinase 1 acts_upstream_of_or_within IGI (PMID:16314531) MGI PMID:16314531 NCBI chr11:116,421,662...116,427,502
Ensembl chr11:116,421,751...116,427,501
JBrowse link
G Sphk2 sphingosine kinase 2 acts_upstream_of_or_within IGI (PMID:16314531) MGI PMID:16314531 NCBI chr 7:45,358,887...45,367,426
Ensembl chr 7:45,358,891...45,367,426
JBrowse link
G Sry sex determining region of Chr Y involved_in IBA GO_Central GO_REF:0000033 NCBI chr  Y:2,662,471...2,663,658
Ensembl chr  Y:2,662,471...2,663,658
JBrowse link
G Stk36 serine/threonine kinase 36 acts_upstream_of_or_within IMP (PMID:21746835) MGI PMID:21746835 NCBI chr 1:74,640,583...74,676,053
Ensembl chr 1:74,640,604...74,676,053
JBrowse link
G Stxbp3 syntaxin binding protein 3 acts_upstream_of_or_within IMP (PMID:15690082) MGI PMID:15690082 NCBI chr 3:108,700,496...108,747,818
Ensembl chr 3:108,700,492...108,747,842
JBrowse link
G Svbp small vasohibin binding protein involved_in IMP (MGI:7285999|PMID:35482892), (MGI:7287852|PMID:31363758) UniProt PMID:31363758 PMID:35482892 MGI:7285999 MGI:7287852 NCBI chr 4:119,052,507...119,058,495
Ensembl chr 4:119,052,503...119,058,495
JBrowse link
G Tbc1d23 TBC1 domain family, member 23 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:56,989,225...57,051,891
Ensembl chr16:56,989,225...57,051,867
JBrowse link
G Tgfbr2 transforming growth factor, beta receptor II involved_in IMP (MGI:2678274|PMID:12975342) BHF-UCL PMID:12975342 MGI:2678274 NCBI chr 9:115,916,763...116,004,431
Ensembl chr 9:115,913,361...116,004,428
JBrowse link
G Tmx2 thioredoxin-related transmembrane protein 2 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 2:84,501,655...84,509,172
Ensembl chr 2:84,501,660...84,509,484
JBrowse link
G Tubgcp2 tubulin, gamma complex component 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:139,575,868...139,616,587
Ensembl chr 7:139,575,868...139,616,582
JBrowse link
G Tulp3 TUB like protein 3 acts_upstream_of_or_within IMP (PMID:11406614), (PMID:19286674) MGI PMID:11406614 PMID:19286674 NCBI chr 6:128,298,103...128,332,833
Ensembl chr 6:128,298,124...128,332,814
JBrowse link
G Ufc1 ubiquitin-fold modifier conjugating enzyme 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:171,116,137...171,122,575
Ensembl chr 1:171,116,136...171,122,597
JBrowse link
G Ufm1 ubiquitin-fold modifier 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:53,760,797...53,771,228
Ensembl chr 3:53,760,797...53,771,251
JBrowse link
G Ugp2 UDP-glucose pyrophosphorylase 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:21,271,126...21,321,267
Ensembl chr11:21,271,138...21,321,201
JBrowse link
G Ulk4 unc-51-like kinase 4 acts_upstream_of_or_within IMP (PMID:27445138) MGI PMID:27445138 NCBI chr 9:120,793,520...121,115,225
Ensembl chr 9:120,784,417...121,106,263
JBrowse link
G Unc5c unc-5 netrin receptor C acts_upstream_of_or_within IMP (PMID:9126743)
(PMID:10818148)
(PMID:1401878), (PMID:9550145)
MGI PMID:1401878 PMID:9126743 PMID:9550145 PMID:10818148 NCBI chr 3:141,171,360...141,540,685
Ensembl chr 3:141,170,977...141,540,685
JBrowse link
G Upf3b UPF3 regulator of nonsense transcripts homolog B (yeast) acts_upstream_of IMP (PMID:23821644) MGI PMID:23821644 NCBI chr  X:36,355,331...36,374,124
Ensembl chr  X:36,355,331...36,373,975
JBrowse link
G Utp3 UTP3 small subunit processome component involved_in IDA (MGI:2136064|PMID:11404095) UniProt PMID:11404095 MGI:2136064 NCBI chr 5:88,702,321...88,703,949
Ensembl chr 5:88,702,321...88,703,949
JBrowse link
G Vax1 ventral anterior homeobox 1 acts_upstream_of_or_within
involved_in
IMP
IBA
(PMID:10601035)
(PMID:10601036)
MGI
GO_Central
PMID:10601035 PMID:10601036 GO_REF:0000033 NCBI chr19:59,152,912...59,158,829
Ensembl chr19:59,154,619...59,158,488
JBrowse link
G Vax2 ventral anterior homeobox 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:83,688,221...83,715,295
Ensembl chr 6:83,688,246...83,715,295
JBrowse link
G Vps13b vacuolar protein sorting 13B acts_upstream_of_or_within IMP (PMID:37573958) MGI PMID:37573958 NCBI chr15:35,371,264...35,931,375
Ensembl chr15:35,371,306...35,931,375
JBrowse link
G Wdr47 WD repeat domain 47 acts_upstream_of_or_within IMP (PMID:29078390) MGI PMID:29078390 NCBI chr 3:108,498,302...108,553,035
Ensembl chr 3:108,498,595...108,553,035
JBrowse link
G Zfp335 zinc finger protein 335 involved_in IMP
IBA
ISO
(MGI:5468205|PMID:23178126) UniProt
GO_Central
MGI
PMID:23178126 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:5468205 NCBI chr 2:164,733,802...164,756,034
Ensembl chr 2:164,733,802...164,753,677
JBrowse link
G Zic1 zinc finger protein of the cerebellum 1 involved_in IDA
ISO
(MGI:78770|PMID:7931345) UniProt
MGI
PMID:7931345 GO_REF:0000119 MGI:4834177 MGI:78770 NCBI chr 9:91,240,111...91,250,136
Ensembl chr 9:91,240,111...91,247,863
JBrowse link
brain morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afdn afadin, adherens junction formation factor acts_upstream_of_or_within IGI (PMID:25100583) MGI PMID:25100583 NCBI chr17:13,980,735...14,126,059
Ensembl chr17:13,980,801...14,126,412
JBrowse link
G Akt3 thymoma viral proto-oncogene 3 acts_upstream_of_or_within IMP (PMID:15713641) MGI PMID:15713641 NCBI chr 1:176,847,642...177,091,688
Ensembl chr 1:176,847,639...177,085,769
JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 acts_upstream_of_or_within IMP (PMID:18032602) MGI PMID:18032602 NCBI chr19:4,936,906...4,956,681
Ensembl chr19:4,936,906...4,956,656
JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 acts_upstream_of_or_within IMP (PMID:18032602) MGI PMID:18032602 NCBI chr 8:94,794,580...94,825,997
Ensembl chr 8:94,794,582...94,825,556
JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within IMP (PMID:18032602) MGI PMID:18032602 NCBI chr 9:59,229,249...59,260,791
Ensembl chr 9:59,229,273...59,260,791
JBrowse link
G Cdh2 cadherin 2 acts_upstream_of_or_within IGI (PMID:25100583) MGI PMID:25100583 NCBI chr18:16,721,934...16,942,303
Ensembl chr18:16,721,934...16,942,303
JBrowse link
G Ctnna2 catenin alpha 2 involved_in IMP (MGI:2181860|PMID:12089526), (MGI:3654578|PMID:16691566) UniProt PMID:12089526 PMID:16691566 MGI:2181860 MGI:3654578 NCBI chr 6:76,858,620...77,956,798
Ensembl chr 6:76,858,620...77,956,682
JBrowse link
G Emx1 empty spiracles homeobox 1 acts_upstream_of_or_within IGI (PMID:25100583)
(PMID:23178126)
MGI PMID:23178126 PMID:25100583 NCBI chr 6:85,164,913...85,181,445
Ensembl chr 6:85,164,420...85,181,444
JBrowse link
G Fancc Fanconi anemia, complementation group C acts_upstream_of_or_within IGI (PMID:24483844) MGI PMID:24483844 NCBI chr13:63,452,519...63,645,126
Ensembl chr13:63,432,857...63,645,092
JBrowse link
G Fancd2 Fanconi anemia, complementation group D2 acts_upstream_of_or_within IGI (PMID:24483844) MGI PMID:24483844 NCBI chr 6:113,508,622...113,573,981
Ensembl chr 6:113,508,643...113,573,978
JBrowse link
G Fbxw11 F-box and WD-40 domain protein 11 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:32,592,595...32,696,816
Ensembl chr11:32,592,724...32,696,816
JBrowse link
G Foxo3 forkhead box O3 acts_upstream_of_or_within IGI (PMID:24483844) MGI PMID:24483844 NCBI chr10:42,057,841...42,152,691
Ensembl chr10:42,057,837...42,152,751
JBrowse link
G Gba1 glucosylceramidase beta 1 acts_upstream_of_or_within IMP (PMID:17954912) MGI PMID:17954912 NCBI chr 3:89,110,235...89,119,944
Ensembl chr 3:89,110,235...89,116,273
JBrowse link
G Mir124a-1 microRNA 124a-1 acts_upstream_of_or_within IMP (PMID:21857657) MGI PMID:21857657 NCBI chr14:64,828,106...64,828,190
Ensembl chr14:64,828,106...64,828,190
JBrowse link
G Mkks McKusick-Kaufman syndrome acts_upstream_of_or_within IMP (PMID:18032602) MGI PMID:18032602 NCBI chr 2:136,715,700...136,733,422
Ensembl chr 2:136,715,700...136,733,309
JBrowse link
G Nfix nuclear factor I/X acts_upstream_of_or_within IMP (PMID:30503862) MGI PMID:30503862 NCBI chr 8:85,431,341...85,527,086
Ensembl chr 8:85,426,505...85,526,973
JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase, isoform 1b, subunit 1 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr11:74,564,775...74,615,210
Ensembl chr11:74,564,775...74,615,496
JBrowse link
G Pax2 paired box 2 involved_in IMP (MGI:84247|PMID:8951055) DFLAT PMID:8951055 MGI:84247 NCBI chr19:44,735,040...44,826,708
Ensembl chr19:44,735,057...44,826,310
JBrowse link
G Pcnt pericentrin (kendrin) acts_upstream_of_or_within IMP (PMID:20096683) MGI PMID:20096683 NCBI chr10:76,187,098...76,279,988
Ensembl chr10:76,187,097...76,278,620
JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within IGI (PMID:17614943) MGI PMID:17614943 NCBI chr12:83,734,926...83,781,869
Ensembl chr12:83,734,926...83,781,973
JBrowse link
G Psen2 presenilin 2 acts_upstream_of_or_within IGI (PMID:17614943) MGI PMID:17614943 NCBI chr 1:180,054,569...180,091,030
Ensembl chr 1:180,054,569...180,091,003
JBrowse link
G Pten phosphatase and tensin homolog involved_in IMP (MGI:3832995|PMID:19208814) CACAO PMID:19208814 MGI:3832995 NCBI chr19:32,734,977...32,803,560
Ensembl chr19:32,734,897...32,803,560
JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in IMP (MGI:4948759|PMID:21423165) BHF-UCL PMID:21423165 MGI:4948759 NCBI chr15:89,376,929...89,444,464
Ensembl chr15:89,383,826...89,444,464
JBrowse link
G Slc4a10 solute carrier family 4, sodium bicarbonate cotransporter-like, member 10 acts_upstream_of_or_within IMP (PMID:18165320) MGI PMID:18165320 NCBI chr 2:61,876,815...62,157,087
Ensembl chr 2:61,876,806...62,157,074
JBrowse link
G Slc6a4 solute carrier family 6 (neurotransmitter transporter, serotonin), member 4 involved_in IMP (MGI:3832995|PMID:19208814) CACAO PMID:19208814 MGI:3832995 NCBI chr11:76,889,423...76,923,169
Ensembl chr11:76,889,429...76,923,166
JBrowse link
G Spef2 sperm flagellar 2 acts_upstream_of_or_within IMP (PMID:21715716) MGI PMID:21715716 NCBI chr15:9,578,279...9,748,954
Ensembl chr15:9,578,279...9,748,954
JBrowse link
G Vps51 VPS51 GARP complex subunit involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr19:6,117,872...6,127,217
Ensembl chr19:6,117,872...6,127,261
JBrowse link
G Zfp335 zinc finger protein 335 acts_upstream_of_or_within IMP
IGI
(PMID:23178126) MGI PMID:23178126 NCBI chr 2:164,733,802...164,756,034
Ensembl chr 2:164,733,802...164,753,677
JBrowse link
brain segmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr2 early growth response 2 acts_upstream_of_or_within IMP (PMID:7903221) MGI PMID:7903221 NCBI chr10:67,370,334...67,383,354
Ensembl chr10:67,371,305...67,378,018
JBrowse link
G Hoxa2 homeobox A2 acts_upstream_of_or_within IMP (PMID:9367425) MGI PMID:9367425 NCBI chr 6:52,139,389...52,141,808
Ensembl chr 6:52,139,397...52,141,811
JBrowse link
G Mafb MAF bZIP transcription factor B acts_upstream_of_or_within IMP (PMID:7925021) MGI PMID:7925021 NCBI chr 2:160,205,597...160,208,985
Ensembl chr 2:160,205,623...160,208,985
JBrowse link
Cajal-Retzius cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes1 hes family bHLH transcription factor 1 acts_upstream_of IGI (PMID:18579678) MGI PMID:18579678 NCBI chr16:29,883,259...29,886,614
Ensembl chr16:29,883,202...29,886,614
JBrowse link
G Neurog2 neurogenin 2 acts_upstream_of IDA (PMID:18579678) MGI PMID:18579678 NCBI chr 3:127,426,382...127,429,285
Ensembl chr 3:127,426,784...127,429,280
JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within IMP (PMID:15548218) MGI PMID:15548218 NCBI chr12:83,734,926...83,781,869
Ensembl chr12:83,734,926...83,781,973
JBrowse link
caudate nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp2 forkhead box P2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:14,901,348...15,441,976
Ensembl chr 6:14,901,348...15,441,976
JBrowse link
cell differentiation in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxa2 forkhead box A2 acts_upstream_of_or_within IMP
IGI
(PMID:17922007) MGI PMID:17922007 NCBI chr 2:147,884,797...147,888,889
Ensembl chr 2:147,884,797...147,888,889
JBrowse link
G Gata2 GATA binding protein 2 acts_upstream_of_or_within IMP (PMID:10357893) MGI PMID:10357893 NCBI chr 6:88,170,873...88,184,014
Ensembl chr 6:88,170,873...88,184,014
JBrowse link
G Nog noggin involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:89,191,464...89,193,385
Ensembl chr11:89,191,464...89,193,158
JBrowse link
G Phox2b paired-like homeobox 2b acts_upstream_of_or_within IMP (PMID:17922007) MGI PMID:17922007 NCBI chr 5:67,251,751...67,256,399
Ensembl chr 5:67,251,742...67,256,644
JBrowse link
cell differentiation in spinal cord term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dbx1 developing brain homeobox 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:49,281,247...49,286,583
Ensembl chr 7:49,281,247...49,286,597
JBrowse link
G Notch1 notch 1 ISO RGD PMID:20195794 RGD:2325285 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675
JBrowse link
cell migration in diencephalon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxb1 forkhead box B1 involved_in IMP (MGI:4887555|PMID:19046377) UniProt PMID:19046377 MGI:4887555 NCBI chr 9:69,664,992...69,668,222
Ensembl chr 9:69,664,992...69,668,222
JBrowse link
cell migration in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nhlh2 nescient helix loop helix 2 acts_upstream_of_or_within IGI (MGI:3723363|PMID:17573818) UniProt PMID:17573818 MGI:3723363 NCBI chr 3:101,917,425...101,922,808
Ensembl chr 3:101,917,392...101,922,808
JBrowse link
G Pou4f1 POU domain, class 4, transcription factor 1 acts_upstream_of_or_within IMP (PMID:8955272) MGI PMID:8955272 NCBI chr14:104,699,111...104,705,554
Ensembl chr14:104,699,112...104,705,435
JBrowse link
G Sema4c sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C involved_in IMP (MGI:4881530|PMID:21122816) UniProt PMID:21122816 MGI:4881530 NCBI chr 1:36,587,720...36,599,780
Ensembl chr 1:36,587,720...36,597,430
JBrowse link
cell motility involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmerb1 bMERB domain containing 1 acts_upstream_of IMP (PMID:25099998) MGI PMID:25099998 NCBI chr16:13,802,975...13,922,916
Ensembl chr16:13,804,468...13,919,364
JBrowse link
G Dab2ip disabled 2 interacting protein involved_in IMP (MGI:5463669|PMID:23056358) UniProt PMID:23056358 MGI:5463669 NCBI chr 2:35,448,285...35,621,006
Ensembl chr 2:35,448,278...35,621,006
JBrowse link
cell proliferation in external granule layer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog acts_upstream_of_or_within IDA (PMID:10970885) MGI PMID:10970885 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254
JBrowse link
cell proliferation in forebrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arx aristaless related homeobox acts_upstream_of_or_within IMP (PMID:15677725) MGI PMID:15677725 NCBI chr  X:92,330,113...92,341,963
Ensembl chr  X:92,330,051...92,341,963
JBrowse link
G Disc1 disrupted in schizophrenia 1 involved_in IMP (MGI:4821185|PMID:20624590) DFLAT PMID:20624590 MGI:4821185 NCBI chr 8:125,773,928...125,991,882
Ensembl chr 8:125,780,934...125,988,597
JBrowse link
G Dixdc1 DIX domain containing 1 involved_in IMP (MGI:4821185|PMID:20624590) DFLAT PMID:20624590 MGI:4821185 NCBI chr 9:50,574,052...50,650,900
Ensembl chr 9:50,574,052...50,650,817
JBrowse link
G Emx2 empty spiracles homeobox 2 acts_upstream_of_or_within IMP (PMID:10729342) MGI PMID:10729342 NCBI chr19:59,447,122...59,453,789
Ensembl chr19:59,446,804...59,453,789
JBrowse link
G Fabp7 fatty acid binding protein 7, brain acts_upstream_of_or_within IMP (PMID:18001149) MGI PMID:18001149 NCBI chr10:57,661,019...57,664,546
Ensembl chr10:57,660,977...57,664,546
JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within IMP (PMID:16613831) MGI PMID:16613831 NCBI chr19:45,724,930...45,731,380
Ensembl chr19:45,725,237...45,731,354
JBrowse link
G Hmga2 high mobility group AT-hook 2 acts_upstream_of_or_within IMP (PMID:18957199) MGI PMID:18957199 NCBI chr10:120,197,173...120,312,374
Ensembl chr10:120,197,180...120,312,374
JBrowse link
G Kif14 kinesin family member 14 involved_in IMP (MGI:5485315|PMID:23308235) UniProt PMID:23308235 MGI:5485315 NCBI chr 1:136,394,044...136,483,676
Ensembl chr 1:136,394,081...136,459,249
JBrowse link
G Lhx5 LIM homeobox protein 5 acts_upstream_of_or_within IMP (PMID:10325223) MGI PMID:10325223 NCBI chr 5:120,569,951...120,579,522
Ensembl chr 5:120,569,764...120,579,288
JBrowse link
G Ncor2 nuclear receptor co-repressor 2 acts_upstream_of_or_within IMP (PMID:17928865) MGI PMID:17928865 NCBI chr 5:125,094,217...125,256,302
Ensembl chr 5:125,094,217...125,256,283
JBrowse link
G Nfib nuclear factor I/B involved_in IMP (PMID:27965439) MGI PMID:27965439 NCBI chr 4:82,208,410...82,424,988
Ensembl chr 4:82,208,410...82,623,987
JBrowse link
G Nfix nuclear factor I/X involved_in IMP
IDA
(PMID:27965439) MGI PMID:27965439 NCBI chr 8:85,431,341...85,527,086
Ensembl chr 8:85,426,505...85,526,973
JBrowse link
G Ngf nerve growth factor ISO RGD PMID:29409115 RGD:402463967 NCBI chr 3:102,377,235...102,428,329
Ensembl chr 3:102,377,235...102,428,329
JBrowse link
G Rrm1 ribonucleotide reductase M1 ISO RGD PMID:12834878 RGD:5133694 NCBI chr 7:102,090,902...102,118,978
Ensembl chr 7:102,090,902...102,118,978
JBrowse link
G Six3 sine oculis-related homeobox 3 involved_in IMP (MGI:3813369|PMID:18694563) UniProt PMID:18694563 MGI:3813369 NCBI chr17:85,921,036...85,933,619
Ensembl chr17:85,921,036...85,936,730
JBrowse link
G Wnt3a wingless-type MMTV integration site family, member 3A involved_in IDA (MGI:2667422|PMID:12843296) BHF-UCL PMID:12843296 MGI:2667422 NCBI chr11:59,138,859...59,181,579
Ensembl chr11:59,138,859...59,181,578
JBrowse link
G Wnt7a wingless-type MMTV integration site family, member 7A involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:91,340,963...91,388,335
Ensembl chr 6:91,340,963...91,388,345
JBrowse link
G Wnt7b wingless-type MMTV integration site family, member 7B involved_in IDA (MGI:2667422|PMID:12843296) BHF-UCL PMID:12843296 MGI:2667422 NCBI chr15:85,419,638...85,466,022
Ensembl chr15:85,419,638...85,466,674
JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within IMP (PMID:17644613) MGI PMID:17644613 NCBI chr 2:44,873,523...45,007,378
Ensembl chr 2:44,873,644...45,007,407
JBrowse link
cell proliferation in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C5ar1 complement component 5a receptor 1 involved_in ISO RGD
MGI
PMID:18635264 GO_REF:0000096 MGI:4417868 RGD:5129699 NCBI chr 7:15,980,668...15,993,465
Ensembl chr 7:15,980,668...15,993,465
JBrowse link
cell proliferation in midbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fzd3 frizzled class receptor 3 acts_upstream_of_or_within IGI (PMID:19842188) MGI PMID:19842188 NCBI chr14:65,429,890...65,499,912
Ensembl chr14:65,429,898...65,499,912
JBrowse link
G Fzd6 frizzled class receptor 6 acts_upstream_of_or_within IGI (PMID:19842188) MGI PMID:19842188 NCBI chr15:38,869,673...38,901,587
Ensembl chr15:38,869,429...38,901,583
JBrowse link
G Wnt1 wingless-type MMTV integration site family, member 1 involved_in IDA (MGI:2679774|PMID:14557550), (MGI:3045659|PMID:15121182) ParkinsonsUK-UCL PMID:14557550 PMID:15121182 MGI:2679774 MGI:3045659 NCBI chr15:98,687,738...98,691,711
Ensembl chr15:98,687,738...98,691,718
JBrowse link
G Wnt2 wingless-type MMTV integration site family, member 2 involved_in IMP
ISO
(MGI:4461115|PMID:20018874) CACAO
MGI
PMID:20018874 GO_REF:0000119 MGI:4461115 MGI:4834177 NCBI chr 6:17,988,939...18,032,771
Ensembl chr 6:17,988,939...18,030,584
JBrowse link
G Wnt3a wingless-type MMTV integration site family, member 3A involved_in IDA (MGI:2679774|PMID:14557550) ParkinsonsUK-UCL PMID:14557550 MGI:2679774 NCBI chr11:59,138,859...59,181,579
Ensembl chr11:59,138,859...59,181,578
JBrowse link
cell-cell adhesion involved in neuronal-glial interactions involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dab1 disabled 1 acts_upstream_of_or_within IMP (PMID:15091337) MGI PMID:15091337 NCBI chr 4:103,476,425...104,602,041
Ensembl chr 4:103,476,556...104,602,041
JBrowse link
central nervous system formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sptbn1 spectrin beta, non-erythrocytic 1 involved_in IMP
ISO
(MGI:6742151|PMID:34211179) UniProt
MGI
PMID:34211179 GO_REF:0000119 MGI:4834177 MGI:6742151 NCBI chr11:30,049,395...30,218,384
Ensembl chr11:30,049,395...30,218,175
JBrowse link
central nervous system interneuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tctn1 tectonic family member 1 acts_upstream_of_or_within IMP (PMID:16357211) MGI PMID:16357211 NCBI chr 5:122,377,558...122,402,557
Ensembl chr 5:122,375,911...122,402,523
JBrowse link
central nervous system maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp6ap2 ATPase, H+ transporting, lysosomal accessory protein 2 involved_in IMP
ISO
(MGI:6467701|PMID:30985297) UniProt
MGI
PMID:30985297 GO_REF:0000119 MGI:4834177 MGI:6467701 NCBI chr  X:12,453,998...12,483,290
Ensembl chr  X:12,454,040...12,483,288
JBrowse link
G Cx3cr1 C-X3-C motif chemokine receptor 1 involved_in IMP (MGI:5576986|PMID:24487234) ARUK-UCL PMID:24487234 MGI:5576986 NCBI chr 9:119,877,749...119,897,362
Ensembl chr 9:119,877,749...119,898,945
JBrowse link
central nervous system morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Erbb4 erb-b2 receptor tyrosine kinase 4 involved_in IMP (MGI:1352955|PMID:10655590) UniProt PMID:10655590 MGI:1352955 NCBI chr 1:68,071,063...69,147,756
Ensembl chr 1:68,071,345...69,147,218
JBrowse link
G Wnt1 wingless-type MMTV integration site family, member 1 involved_in IMP (MGI:1931348|PMID:2202907) BHF-UCL PMID:2202907 MGI:1931348 NCBI chr15:98,687,738...98,691,711
Ensembl chr15:98,687,738...98,691,718
JBrowse link
central nervous system myelin formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP-binding cassette, sub-family A member 2 acts_upstream_of_or_within
involved_in
IMP
ISO
(MGI:3697245|PMID:17060448) ARUK-UCL
MGI
PMID:17060448 GO_REF:0000096 MGI:3697245 MGI:4417868 NCBI chr 2:25,318,611...25,338,556
Ensembl chr 2:25,318,715...25,338,552
JBrowse link
G Ckap5 cytoskeleton associated protein 5 acts_upstream_of_or_within IMP (PMID:28063167) MGI PMID:28063167 NCBI chr 2:91,357,092...91,451,024
Ensembl chr 2:91,357,107...91,451,009
JBrowse link
G Cntn1 contactin 1 involved_in IGI (PMID:31641127) MGI PMID:31641127 NCBI chr15:91,949,034...92,239,834
Ensembl chr15:91,949,046...92,239,848
JBrowse link
G Ercc2 excision repair cross-complementing rodent repair deficiency, complementation group 2 acts_upstream_of_or_within IMP (PMID:17952069) MGI PMID:17952069 NCBI chr 7:19,115,942...19,129,619
Ensembl chr 7:19,115,935...19,129,619
JBrowse link
G Mag myelin-associated glycoprotein involved_in IGI (PMID:31641127) MGI PMID:31641127 NCBI chr 7:30,598,600...30,614,347
Ensembl chr 7:30,598,601...30,614,298
JBrowse link
G Mios meiosis regulator for oocyte development involved_in IMP (MGI:6870482|PMID:35022234) UniProt PMID:35022234 MGI:6870482 NCBI chr 6:8,209,111...8,240,573
Ensembl chr 6:8,209,222...8,236,274
JBrowse link
G Mobp myelin-associated oligodendrocytic basic protein ISO RGD PMID:9306245 RGD:27226697 NCBI chr 9:119,978,740...120,010,554
Ensembl chr 9:119,978,773...120,010,550
JBrowse link
G Tenm4 teneurin transmembrane protein 4 involved_in IMP
ISO
(MGI:5437806|PMID:22915103) UniProt
MGI
PMID:22915103 GO_REF:0000119 MGI:4834177 MGI:5437806 NCBI chr 7:95,550,262...96,560,300
Ensembl chr 7:95,820,453...96,560,300
JBrowse link
G Tlr2 toll-like receptor 2 involved_in ISO RGD
MGI
PMID:21971760 GO_REF:0000096 MGI:4417868 RGD:7241097 NCBI chr 3:83,743,579...83,749,045
Ensembl chr 3:83,743,579...83,749,074
JBrowse link
central nervous system myelin maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clu clusterin involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr14:66,206,093...66,218,992
Ensembl chr14:66,205,932...66,218,996
JBrowse link
G Fa2h fatty acid 2-hydroxylase acts_upstream_of_or_within IMP (PMID:21491498)
(PMID:18815260)
MGI PMID:18815260 PMID:21491498 NCBI chr 8:112,071,770...112,120,453
Ensembl chr 8:112,071,767...112,120,456
JBrowse link
G Myrf myelin regulatory factor involved_in IMP
IBA
(MGI:5437779|PMID:22956843) UniProt
GO_Central
PMID:22956843 GO_REF:0000033 MGI:5437779 NCBI chr19:10,185,635...10,218,134
Ensembl chr19:10,185,636...10,218,112
JBrowse link
G Pten phosphatase and tensin homolog involved_in IMP (MGI:3772418|PMID:18082964) CACAO PMID:18082964 MGI:3772418 NCBI chr19:32,734,977...32,803,560
Ensembl chr19:32,734,897...32,803,560
JBrowse link
central nervous system myelination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G 9630013A20Rik RIKEN cDNA 9630013A20 gene acts_upstream_of_or_within IMP (PMID:28041882) MGI PMID:28041882 NCBI chr14:84,696,164...84,713,864
Ensembl chr14:84,696,079...84,713,864
JBrowse link
G Aspa aspartoacylase ISO RGD PMID:12524181 RGD:632029 NCBI chr11:73,195,813...73,217,677
Ensembl chr11:73,195,818...73,220,422
JBrowse link
G B4galt5 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5 involved_in IMP (MGI:6196231|PMID:30114188) UniProt PMID:30114188 MGI:6196231 NCBI chr 2:167,140,364...167,191,155
Ensembl chr 2:167,140,364...167,191,103
JBrowse link
G B4galt6 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 6 involved_in IMP (MGI:6196231|PMID:30114188) UniProt PMID:30114188 MGI:6196231 NCBI chr18:20,817,656...20,879,461
Ensembl chr18:20,817,656...20,879,461
JBrowse link
G Cntn2 contactin 2 acts_upstream_of_or_within IMP (PMID:18650339) MGI PMID:18650339 NCBI chr 1:132,437,163...132,470,989
Ensembl chr 1:132,437,165...132,470,994
JBrowse link
G Cntnap1 contactin associated protein-like 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:101,065,429...101,081,550
Ensembl chr11:101,061,349...101,081,550
JBrowse link
G Cntnap2 contactin associated protein-like 2 involved_in IMP (PMID:29300891) MGI PMID:29300891 NCBI chr 6:45,036,995...47,278,330
Ensembl chr 6:45,036,291...47,281,147
JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in IMP (PMID:21935678) MGI PMID:21935678 NCBI chr10:24,513,812...24,588,057
Ensembl chr10:24,513,812...24,588,057
JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of_or_within IMP (PMID:12574417) MGI PMID:12574417 NCBI chr 5:33,879,068...33,894,412
Ensembl chr 5:33,879,018...33,894,412
JBrowse link
G Gpm6b glycoprotein m6b involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:165,021,911...165,172,028
Ensembl chr  X:165,021,907...165,171,984
JBrowse link
G Hes5 hes family bHLH transcription factor 5 acts_upstream_of_or_within IMP (PMID:17006542) MGI PMID:17006542 NCBI chr 4:155,042,358...155,046,829
Ensembl chr 4:155,045,380...155,046,828
JBrowse link
G Id4 inhibitor of DNA binding 4 acts_upstream_of_or_within IMP (PMID:16862533) MGI PMID:16862533 NCBI chr13:48,414,592...48,419,504
Ensembl chr13:48,414,704...48,419,502
JBrowse link
G Kcnj10 potassium inwardly-rectifying channel, subfamily J, member 10 acts_upstream_of_or_within IMP (PMID:17942730) MGI PMID:17942730 NCBI chr 1:172,168,777...172,201,652
Ensembl chr 1:172,168,777...172,201,652
JBrowse link
G Mag myelin-associated glycoprotein involved_in IMP (MGI:1202048|PMID:9482783) UniProt PMID:9482783 MGI:1202048 NCBI chr 7:30,598,600...30,614,347
Ensembl chr 7:30,598,601...30,614,298
JBrowse link
G Mal myelin and lymphocyte protein, T cell differentiation protein acts_upstream_of IMP (PMID:15337780) MGI PMID:15337780 NCBI chr 2:127,475,146...127,498,615
Ensembl chr 2:127,475,146...127,498,615
JBrowse link
G Myrf myelin regulatory factor involved_in IMP (MGI:3850982|PMID:19596243), (MGI:5544144|PMID:24204311), (MGI:5805298|PMID:27532821) UniProt PMID:19596243 PMID:24204311 PMID:27532821 MGI:3850982 MGI:5544144 MGI:5805298 NCBI chr19:10,185,635...10,218,134
Ensembl chr19:10,185,636...10,218,112
JBrowse link
G Ncstn nicastrin acts_upstream_of_or_within IMP (PMID:27008863) MGI PMID:27008863 NCBI chr 1:171,893,580...171,910,356
Ensembl chr 1:171,893,580...171,910,362
JBrowse link
G Nkx6-2 NK6 homeobox 2 acts_upstream_of_or_within IMP (PMID:15601927) MGI PMID:15601927 NCBI chr 7:139,159,292...139,162,726
Ensembl chr 7:139,159,292...139,162,713
JBrowse link
G Omg oligodendrocyte myelin glycoprotein acts_upstream_of_or_within ISO (PMID:2434274) MGI PMID:2434274 NCBI chr11:79,391,808...79,394,908
Ensembl chr11:79,391,808...79,394,910
JBrowse link
G Plp1 proteolipid protein (myelin) 1 acts_upstream_of_or_within
involved_in
IMP
IBA
(PMID:1694232) MGI
GO_Central
PMID:1694232 GO_REF:0000033 NCBI chr  X:135,720,897...135,739,331
Ensembl chr  X:135,723,420...135,740,482
JBrowse link
G Sox10 SRY (sex determining region Y)-box 10 involved_in IMP (MGI:5544144|PMID:24204311), (MGI:5805298|PMID:27532821) UniProt PMID:24204311 PMID:27532821 MGI:5544144 MGI:5805298 NCBI chr15:79,039,113...79,048,690
Ensembl chr15:79,039,108...79,049,440
JBrowse link
G Ulk4 unc-51-like kinase 4 acts_upstream_of_or_within IMP (PMID:29034508) MGI PMID:29034508 NCBI chr 9:120,793,520...121,115,225
Ensembl chr 9:120,784,417...121,106,263
JBrowse link
central nervous system neuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgap35 Rho GTPase activating protein 35 involved_in IMP (MGI:1933687|PMID:11283609) UniProt PMID:11283609 MGI:1933687 NCBI chr 7:16,228,398...16,349,313
Ensembl chr 7:16,227,644...16,348,918
JBrowse link
G Arhgef28 Rho guanine nucleotide exchange factor 28 acts_upstream_of_or_within IMP (PMID:15378065) MGI PMID:15378065 NCBI chr13:98,035,105...98,343,183
Ensembl chr13:98,035,977...98,342,947
JBrowse link
G Atg7 autophagy related 7 acts_upstream_of_or_within IMP (PMID:20577052) MGI PMID:20577052 NCBI chr 6:114,620,075...114,837,565
Ensembl chr 6:114,620,058...114,837,575
JBrowse link
G B4galt5 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5 involved_in IMP (MGI:6196231|PMID:30114188) UniProt PMID:30114188 MGI:6196231 NCBI chr 2:167,140,364...167,191,155
Ensembl chr 2:167,140,364...167,191,103
JBrowse link
G B4galt6 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 6 involved_in IMP (MGI:6196231|PMID:30114188) UniProt PMID:30114188 MGI:6196231 NCBI chr18:20,817,656...20,879,461
Ensembl chr18:20,817,656...20,879,461
JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within IMP (PMID:12097474) MGI PMID:12097474 NCBI chr 3:89,660,755...89,671,939
Ensembl chr 3:89,653,502...89,671,939
JBrowse link
G Ndel1 nudE neurodevelopment protein 1 like 1 acts_upstream_of_or_within IMP (PMID:15208636) MGI PMID:15208636 NCBI chr11:68,712,260...68,743,961
Ensembl chr11:68,712,260...68,762,684
JBrowse link
G Prkca protein kinase C, alpha involved_in ISO RGD
MGI
PMID:18062921 GO_REF:0000096 MGI:4417868 RGD:2293300 NCBI chr11:107,824,213...108,237,360
Ensembl chr11:107,824,213...108,234,754
JBrowse link
G Pten phosphatase and tensin homolog involved_in IMP (MGI:3629385|PMID:16675393) CACAO PMID:16675393 MGI:3629385 NCBI chr19:32,734,977...32,803,560
Ensembl chr19:32,734,897...32,803,560
JBrowse link
G Ptk2 PTK2 protein tyrosine kinase 2 acts_upstream_of_or_within IMP (PMID:15378065) MGI PMID:15378065 NCBI chr15:73,076,951...73,297,192
Ensembl chr15:73,076,951...73,295,129
JBrowse link
central nervous system neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agbl4 ATP/GTP binding protein-like 4 acts_upstream_of_or_within IGI (PMID:30420556) MGI PMID:30420556 NCBI chr 4:110,254,823...111,521,521
Ensembl chr 4:110,254,858...111,521,521
JBrowse link
G Agtpbp1 ATP/GTP binding protein 1 acts_upstream_of_or_within IGI (PMID:30420556) MGI PMID:30420556 NCBI chr13:59,597,348...59,705,184
Ensembl chr13:59,593,556...59,733,041
JBrowse link
G Ascl1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within IMP
IGI
(PMID:16469766)
(PMID:15169849)
MGI PMID:15169849 PMID:16469766 NCBI chr10:87,326,681...87,329,522
Ensembl chr10:87,326,681...87,329,522
JBrowse link
G Atp7a ATPase, Cu++ transporting, alpha polypeptide acts_upstream_of_or_within IMP (PMID:8174230) MGI PMID:8174230 NCBI chr  X:105,070,830...105,171,766
Ensembl chr  X:105,070,882...105,168,532
JBrowse link
G Brinp1 bone morphogenic protein/retinoic acid inducible neural specific 1 involved_in IDA (MGI:5521281|PMID:20025061) UniProt PMID:20025061 MGI:5521281 NCBI chr 4:68,679,609...68,872,634
Ensembl chr 4:68,679,751...68,872,634
JBrowse link
G Btg2 BTG anti-proliferation factor 2 acts_upstream_of_or_within IMP (PMID:20020054) MGI PMID:20020054 NCBI chr 1:134,002,603...134,006,893
Ensembl chr 1:134,002,908...134,006,858
JBrowse link
G Cdk5 cyclin dependent kinase 5 acts_upstream_of_or_within IMP (PMID:8855328) MGI PMID:8855328 NCBI chr 5:24,612,595...24,628,737
Ensembl chr 5:24,623,239...24,628,528
JBrowse link
G Fgf8 fibroblast growth factor 8 involved_in ISO development of dopaminergic neurons in the midbrain and serotonergic neurons in the rostral hindbrain RGD
MGI
PMID:9630220 GO_REF:0000096 MGI:4417868 RGD:2289424 NCBI chr19:45,724,930...45,731,380
Ensembl chr19:45,725,237...45,731,354
JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 involved_in ISO RGD
MGI
PMID:17314281 GO_REF:0000096 MGI:4417868 RGD:2325182 NCBI chr 8:26,008,808...26,067,819
Ensembl chr 8:26,003,670...26,065,734
JBrowse link
G Foxg1 forkhead box G1 acts_upstream_of_or_within IMP (PMID:16680166) MGI PMID:16680166 NCBI chr12:49,429,666...49,433,650
Ensembl chr12:49,429,443...49,433,644
JBrowse link
G Gabrb1 gamma-aminobutyric acid type A receptor subunit beta 1 ISO RGD PMID:15158077 RGD:6480239 NCBI chr 5:71,815,264...72,306,915
Ensembl chr 5:71,815,456...72,306,380
JBrowse link
G Gata2 GATA binding protein 2 acts_upstream_of_or_within IMP (PMID:10357893) MGI PMID:10357893 NCBI chr 6:88,170,873...88,184,014
Ensembl chr 6:88,170,873...88,184,014
JBrowse link
G Gba2 glucosidase beta 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:43,566,928...43,578,893
Ensembl chr 4:43,566,928...43,578,873
JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 acts_upstream_of_or_within IMP (PMID:9886073) MGI PMID:9886073 NCBI chr  X:52,076,955...52,110,537
Ensembl chr  X:52,077,014...52,110,536
JBrowse link
G Lep leptin acts_upstream_of_or_within IMP (PMID:10592285) MGI PMID:10592285 NCBI chr 6:29,060,220...29,073,875
Ensembl chr 6:29,060,219...29,073,876
JBrowse link
G Lingo1 leucine rich repeat and Ig domain containing 1 acts_upstream_of_or_within IMP
IDA
(PMID:17726113) MGI PMID:17726113 NCBI chr 9:56,525,743...56,704,355
Ensembl chr 9:56,525,759...56,703,752
JBrowse link
G Lmx1b LIM homeobox transcription factor 1 beta acts_upstream_of_or_within IMP (PMID:17151281) MGI PMID:17151281 NCBI chr 2:33,450,977...33,531,219
Ensembl chr 2:33,450,977...33,530,620
JBrowse link
G Map2 microtubule-associated protein 2 involved_in ISO (PMID:20846339) DFLAT PMID:20846339 NCBI chr 1:66,214,337...66,481,742
Ensembl chr 1:66,214,432...66,481,742
JBrowse link
G Neurog2 neurogenin 2 acts_upstream_of_or_within IGI
IMP
(PMID:16410412) MGI PMID:16410412 NCBI chr 3:127,426,382...127,429,285
Ensembl chr 3:127,426,784...127,429,280
JBrowse link
G Nova2 NOVA alternative splicing regulator 2 involved_in IMP (MGI:5789071|PMID:27223325) UniProt PMID:27223325 MGI:5789071 NCBI chr 7:18,659,319...18,699,244
Ensembl chr 7:18,659,813...18,699,244
JBrowse link
G Npy neuropeptide Y involved_in ISO (PMID:20846339) DFLAT PMID:20846339 NCBI chr 6:49,799,690...49,806,487
Ensembl chr 6:49,799,690...49,806,487
JBrowse link
G Ntrk2 neurotrophic tyrosine kinase, receptor, type 2 involved_in IMP (MGI:1343962|PMID:8402890) UniProt PMID:8402890 MGI:1343962 NCBI chr13:58,954,363...59,281,782
Ensembl chr13:58,954,383...59,281,784
JBrowse link
G Pals1 protein associated with LIN7 1, MAGUK family member involved_in IMP (MGI:4454735|PMID:20399730) UniProt PMID:20399730 MGI:4454735 NCBI chr12:78,795,606...78,887,488
Ensembl chr12:78,795,681...78,887,488
JBrowse link
G Taok1 TAO kinase 1 involved_in IMP
ISO
(MGI:6707836|PMID:33565190) UniProt
MGI
PMID:33565190 GO_REF:0000119 MGI:4834177 MGI:6707836 NCBI chr11:77,419,988...77,516,185
Ensembl chr11:77,419,988...77,498,641
JBrowse link
G Ttc36 tetratricopeptide repeat domain 36 acts_upstream_of_or_within IMP (PMID:31537781) MGI PMID:31537781 NCBI chr 9:44,710,697...44,714,248
Ensembl chr 9:44,710,694...44,714,369
JBrowse link
central nervous system neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl11b B cell leukemia/lymphoma 11B acts_upstream_of_or_within IGI (PMID:18215621) MGI PMID:18215621 NCBI chr12:107,876,662...107,970,404
Ensembl chr12:107,876,662...107,969,861
JBrowse link
G Bmpr1a bone morphogenetic protein receptor, type 1A acts_upstream_of_or_within IGI (PMID:15469980) MGI PMID:15469980 NCBI chr14:34,133,018...34,225,335
Ensembl chr14:34,132,691...34,225,298
JBrowse link
G Bmpr1b bone morphogenetic protein receptor, type 1B acts_upstream_of_or_within IGI (PMID:15469980) MGI PMID:15469980 NCBI chr 3:141,540,230...141,875,335
Ensembl chr 3:141,542,897...141,875,186
JBrowse link
G Brinp2 bone morphogenic protein/retinoic acid inducible neural-specific 2 involved_in IDA (MGI:5521281|PMID:20025061) UniProt PMID:20025061 MGI:5521281 NCBI chr 1:158,072,835...158,185,096
Ensembl chr 1:158,072,839...158,183,896
JBrowse link
G Brinp3 bone morphogenetic protein/retinoic acid inducible neural specific 3 involved_in IDA (MGI:5521281|PMID:20025061) UniProt PMID:20025061 MGI:5521281 NCBI chr 1:146,371,367...146,778,210
Ensembl chr 1:146,370,498...146,778,210
JBrowse link
G Cacna1a calcium channel, voltage-dependent, P/Q type, alpha 1A subunit acts_upstream_of_or_within IMP (PMID:6945603) MGI PMID:6945603 NCBI chr 8:85,065,257...85,366,880
Ensembl chr 8:85,065,268...85,366,875
JBrowse link
G Hoxa1 homeobox A1 acts_upstream_of_or_within IMP (PMID:9806922) MGI PMID:9806922 NCBI chr 6:52,132,573...52,135,299
Ensembl chr 6:52,132,570...52,135,297
JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha acts_upstream_of
acts_upstream_of_or_within
IMP (PMID:15148302)
(PMID:17670789)
MGI PMID:15148302 PMID:17670789 NCBI chr 1:167,515,864...167,676,310
Ensembl chr 1:167,516,806...167,676,310
JBrowse link
G Met met proto-oncogene ISO RGD PMID:18262389 RGD:2317458 NCBI chr 6:17,463,351...17,573,979
Ensembl chr 6:17,463,799...17,573,979
JBrowse link
G Mnx1 motor neuron and pancreas homeobox 1 acts_upstream_of_or_within IMP (PMID:10482234) MGI PMID:10482234 NCBI chr 5:29,678,821...29,683,468
Ensembl chr 5:29,678,032...29,683,468
JBrowse link
G Nkx6-1 NK6 homeobox 1 acts_upstream_of_or_within IMP (PMID:19592574) MGI PMID:19592574 NCBI chr 5:101,807,050...101,812,577
Ensembl chr 5:101,806,005...101,812,862
JBrowse link
G Nr4a2 nuclear receptor subfamily 4, group A, member 2 acts_upstream_of_or_within
involved_in
IMP
IBA
(PMID:11113533) MGI
GO_Central
PMID:11113533 GO_REF:0000033 NCBI chr 2:56,996,845...57,014,152
Ensembl chr 2:56,996,842...57,014,015
JBrowse link
G Pou4f1 POU domain, class 4, transcription factor 1 acts_upstream_of_or_within IMP (PMID:8876243)
(PMID:8955272)
MGI PMID:8876243 PMID:8955272 NCBI chr14:104,699,111...104,705,554
Ensembl chr14:104,699,112...104,705,435
JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within IMP (PMID:16571630) MGI PMID:16571630 NCBI chr 6:29,735,480...29,761,359
Ensembl chr 6:29,735,502...29,761,364
JBrowse link
G Sox5 SRY (sex determining region Y)-box 5 acts_upstream_of_or_within IGI (PMID:18215621) MGI PMID:18215621 NCBI chr 6:143,774,151...144,728,008
Ensembl chr 6:143,774,151...144,727,703
JBrowse link
G Spock1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan 1 involved_in IEP (MGI:1353269|PMID:10640720) UniProt PMID:10640720 MGI:1353269 NCBI chr13:57,569,008...58,056,194
Ensembl chr13:57,569,008...58,056,146
JBrowse link
G Tal1 T cell acute lymphocytic leukemia 1 acts_upstream_of_or_within IMP (PMID:16292311) MGI PMID:16292311 NCBI chr 4:114,913,623...114,928,952
Ensembl chr 4:114,913,623...114,928,952
JBrowse link
G Tulp3 TUB like protein 3 acts_upstream_of_or_within IMP (PMID:19286674) MGI PMID:19286674 NCBI chr 6:128,298,103...128,332,833
Ensembl chr 6:128,298,124...128,332,814
JBrowse link
central nervous system projection neuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family, member e22 acts_upstream_of_or_within IMP (PMID:22284184) MGI PMID:22284184 NCBI chr 3:18,108,489...18,111,678
Ensembl chr 3:18,108,338...18,111,681
JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within IMP (PMID:15608630)
(PMID:11344259), (PMID:14687550)
MGI PMID:11344259 PMID:14687550 PMID:15608630 NCBI chr 3:89,660,755...89,671,939
Ensembl chr 3:89,653,502...89,671,939
JBrowse link
G Dclk1 doublecortin-like kinase 1 acts_upstream_of_or_within IGI (PMID:16387638) MGI PMID:16387638 NCBI chr 3:55,149,724...55,446,489
Ensembl chr 3:55,149,785...55,446,489
JBrowse link
G Dcx doublecortin acts_upstream_of_or_within IGI (PMID:16387638) MGI PMID:16387638 NCBI chr  X:142,638,838...142,716,392
Ensembl chr  X:142,638,838...142,716,307
JBrowse link
G Ephb1 Eph receptor B1 acts_upstream_of_or_within IDA
IMP
(PMID:12971893) MGI PMID:12971893 NCBI chr 9:101,799,327...102,231,892
Ensembl chr 9:101,799,327...102,231,892
JBrowse link
G Ephb2 Eph receptor B2 acts_upstream_of_or_within IMP (PMID:12971893) MGI PMID:12971893 NCBI chr 4:136,374,850...136,563,637
Ensembl chr 4:136,374,850...136,563,299
JBrowse link
G Ephb3 Eph receptor B3 acts_upstream_of_or_within IDA (PMID:12971893) MGI PMID:12971893 NCBI chr16:21,023,530...21,042,054
Ensembl chr16:21,023,505...21,042,055
JBrowse link
G Kifbp kinesin family binding protein involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:62,394,249...62,414,846
Ensembl chr10:62,374,405...62,414,236
JBrowse link
G Mycbp2 MYC binding protein 2, E3 ubiquitin protein ligase involved_in
acts_upstream_of_or_within
IMP (MGI:3759703|PMID:17901218)
(PMID:18031680)
UniProt
MGI
PMID:17901218 PMID:18031680 MGI:3759703 NCBI chr14:103,350,847...103,584,276
Ensembl chr14:103,350,847...103,584,250
JBrowse link
G Nr4a2 nuclear receptor subfamily 4, group A, member 2 acts_upstream_of_or_within IMP (PMID:10585298) MGI PMID:10585298 NCBI chr 2:56,996,845...57,014,152
Ensembl chr 2:56,996,842...57,014,015
JBrowse link
G Prdm8 PR domain containing 8 acts_upstream_of_or_within IMP (PMID:22284184) MGI PMID:22284184 NCBI chr 5:98,315,241...98,335,313
Ensembl chr 5:98,315,057...98,336,850
JBrowse link
G Sptbn4 spectrin beta, non-erythrocytic 4 acts_upstream_of_or_within
involved_in
IMP
IBA
(PMID:17197442) MGI
GO_Central
PMID:17197442 GO_REF:0000033 NCBI chr 7:27,055,808...27,147,128
Ensembl chr 7:27,055,808...27,147,111
JBrowse link
central nervous system segmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zic2 zinc finger protein of the cerebellum 2 involved_in IGI (PMID:17490632) MGI PMID:17490632 NCBI chr14:122,712,796...122,717,740
Ensembl chr14:122,712,847...122,717,264
JBrowse link
G Zic3 zinc finger protein of the cerebellum 3 involved_in IGI (PMID:17490632) MGI PMID:17490632 NCBI chr  X:57,075,988...57,081,990
Ensembl chr  X:57,068,060...57,087,096
JBrowse link
cerebellar cortex development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtr2 angiotensin II receptor, type 2 involved_in ISO RGD
MGI
PMID:19682991 GO_REF:0000096 MGI:4417868 RGD:6903898 NCBI chr  X:21,350,863...21,355,072
Ensembl chr  X:21,350,783...21,355,403
JBrowse link
G Cdk5 cyclin dependent kinase 5 acts_upstream_of_or_within IMP (PMID:8855328) MGI PMID:8855328 NCBI chr 5:24,612,595...24,628,737
Ensembl chr 5:24,623,239...24,628,528
JBrowse link
G Clp1 CLP1, cleavage and polyadenylation factor I subunit involved_in IMP
ISO
(MGI:5568133|PMID:24766809) UniProt
MGI
PMID:24766809 GO_REF:0000119 MGI:4834177 MGI:5568133 NCBI chr 2:84,553,466...84,557,631
Ensembl chr 2:84,552,448...84,557,694
JBrowse link
G Dixdc1 DIX domain containing 1 involved_in ISO RGD
MGI
PMID:19339625 GO_REF:0000096 MGI:4417868 RGD:2308917 NCBI chr 9:50,574,052...50,650,900
Ensembl chr 9:50,574,052...50,650,817
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit acts_upstream_of_or_within IMP (PMID:20798045) MGI PMID:20798045 NCBI chr 6:47,507,208...47,613,843
Ensembl chr 6:47,507,073...47,572,275
JBrowse link
G Fktn fukutin acts_upstream_of_or_within IMP (PMID:29360985) MGI PMID:29360985 NCBI chr 4:53,713,745...53,765,785
Ensembl chr 4:53,713,998...53,777,890
JBrowse link
G Kif14 kinesin family member 14 involved_in IMP (MGI:5485315|PMID:23308235) UniProt PMID:23308235 MGI:5485315 NCBI chr 1:136,394,044...136,483,676
Ensembl chr 1:136,394,081...136,459,249
JBrowse link
G Nav2 neuron navigator 2 involved_in IMP (MGI:5050602|PMID:21419114) CACAO PMID:21419114 MGI:5050602 NCBI chr 7:48,608,796...49,259,838
Ensembl chr 7:48,558,464...49,259,838
JBrowse link
G Neurod2 neurogenic differentiation 2 involved_in IMP (MGI:3621523|PMID:16504944) UniProt PMID:16504944 MGI:3621523 NCBI chr11:98,216,241...98,220,471
Ensembl chr11:98,216,241...98,220,474
JBrowse link
G Ogdh oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) involved_in IEP (MGI:3662936|PMID:16901643) UniProt PMID:16901643 MGI:3662936 NCBI chr11:6,241,597...6,309,094
Ensembl chr11:6,241,633...6,306,642
JBrowse link
cerebellar cortex formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk5 cyclin dependent kinase 5 acts_upstream_of_or_within IMP (PMID:10407039) MGI PMID:10407039 NCBI chr 5:24,612,595...24,628,737
Ensembl chr 5:24,623,239...24,628,528
JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 acts_upstream_of_or_within IGI (PMID:24431450) MGI PMID:24431450 NCBI chr 9:64,093,066...64,160,887
Ensembl chr 9:64,093,052...64,160,913
JBrowse link
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 acts_upstream_of_or_within IMP
IGI
(PMID:24431450) MGI PMID:24431450 NCBI chr 5:121,268,596...121,329,460
Ensembl chr 5:121,268,596...121,329,460
JBrowse link
cerebellar cortex morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Comt catechol-O-methyltransferase acts_upstream_of_or_within IMP (PMID:28556830) MGI PMID:28556830 NCBI chr16:18,225,632...18,247,006
Ensembl chr16:18,225,636...18,245,602
JBrowse link
G Gli1 GLI-Kruppel family member GLI1 acts_upstream_of_or_within IGI (PMID:16571625) MGI PMID:16571625 NCBI chr10:127,165,751...127,177,448
Ensembl chr10:127,165,751...127,177,843
JBrowse link
G Gli2 GLI-Kruppel family member GLI2 acts_upstream_of_or_within IMP
IGI
(PMID:16571625) MGI PMID:16571625 NCBI chr 1:118,761,791...118,987,578
Ensembl chr 1:118,761,862...118,981,349
JBrowse link
G Nfix nuclear factor I/X acts_upstream_of_or_within IMP (PMID:30503862) MGI PMID:30503862 NCBI chr 8:85,431,341...85,527,086
Ensembl chr 8:85,426,505...85,526,973
JBrowse link
G Pcnt pericentrin (kendrin) acts_upstream_of_or_within IMP (PMID:20096683) MGI PMID:20096683 NCBI chr10:76,187,098...76,279,988
Ensembl chr10:76,187,097...76,278,620
JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within IMP (PMID:16571625) MGI PMID:16571625 NCBI chr 6:29,735,480...29,761,359
Ensembl chr 6:29,735,502...29,761,364
JBrowse link
G Trnp1 TMF1-regulated nuclear protein 1 involved_in IMP (MGI:5490679|PMID:23622239) UniProt PMID:23622239 MGI:5490679 NCBI chr 4:133,218,408...133,226,446
Ensembl chr 4:133,218,411...133,225,861
JBrowse link
G Tuba1a tubulin, alpha 1A involved_in IMP (PMID:17218254) MGI PMID:17218254 NCBI chr15:98,847,728...98,851,382
Ensembl chr15:98,847,718...98,851,584
JBrowse link
cerebellar cortex structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pantr2 POU domain, class 3, transcription factor 3 adjacent noncoding transcript 2 acts_upstream_of_or_within IMP (PMID:24381249) MGI PMID:24381249 NCBI chr 1:42,746,221...42,752,614
Ensembl chr 1:42,746,206...42,752,940
JBrowse link
G Usp9x ubiquitin specific peptidase 9, X chromosome acts_upstream_of_or_within IMP (PMID:23861879) MGI PMID:23861879 NCBI chr  X:12,937,221...13,039,567
Ensembl chr  X:12,937,737...13,039,567
JBrowse link
cerebellar granular layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Faim2 Fas apoptotic inhibitory molecule 2 involved_in IMP (MGI:5295128|PMID:21957071) UniProt PMID:21957071 MGI:5295128 NCBI chr15:99,394,886...99,432,757
Ensembl chr15:99,394,893...99,426,046
JBrowse link
G Mdk midkine involved_in IMP (MGI:2178952|PMID:10096022) DFLAT PMID:10096022 MGI:2178952 NCBI chr 2:91,760,149...91,762,348
Ensembl chr 2:91,760,150...91,762,642
JBrowse link
G Ttbk2 tau tubulin kinase 2 involved_in IMP (MGI:5700621|PMID:26323690) ARUK-UCL PMID:26323690 MGI:5700621 NCBI chr 2:120,563,297...120,681,111
Ensembl chr 2:120,563,297...120,681,085
JBrowse link
cerebellar granular layer maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cend1 cell cycle exit and neuronal differentiation 1 involved_in
acts_upstream_of_or_within
IBA
IMP
(PMID:20153830) GO_Central
MGI
PMID:20153830 GO_REF:0000033 NCBI chr 7:141,006,359...141,009,475
Ensembl chr 7:141,006,359...141,009,404
JBrowse link
cerebellar granular layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Serpine2 serine (or cysteine) peptidase inhibitor, clade E, member 2 acts_upstream_of_or_within IMP (PMID:17409116) MGI PMID:17409116 NCBI chr 1:79,772,038...79,836,382
Ensembl chr 1:79,771,914...79,838,897
JBrowse link
cerebellar granular layer structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif14 kinesin family member 14 involved_in IMP (MGI:5485315|PMID:23308235) UniProt PMID:23308235 MGI:5485315 NCBI chr 1:136,394,044...136,483,676
Ensembl chr 1:136,394,081...136,459,249
JBrowse link
cerebellar granule cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b2 ATPase, Ca++ transporting, plasma membrane 2 acts_upstream_of_or_within IMP (PMID:9668038) MGI PMID:9668038 NCBI chr 6:113,720,803...114,019,574
Ensembl chr 6:113,720,792...114,019,574
JBrowse link
G Cbln1 cerebellin 1 precursor protein involved_in IGI (MGI:4839424|PMID:20537373) BHF-UCL PMID:20537373 MGI:4839424 NCBI chr 8:88,195,481...88,199,220
Ensembl chr 8:88,195,033...88,199,237
JBrowse link
G Grid2 glutamate receptor, ionotropic, delta 2 involved_in IGI (MGI:4839424|PMID:20537373) BHF-UCL PMID:20537373 MGI:4839424 NCBI chr 6:63,230,118...64,681,305
Ensembl chr 6:63,232,860...64,681,307
JBrowse link
G Kndc1 kinase non-catalytic C-lobe domain (KIND) containing 1 acts_upstream_of_or_within IMP (PMID:17984326) MGI PMID:17984326 NCBI chr 7:139,474,612...139,521,453
Ensembl chr 7:139,474,612...139,521,450
JBrowse link
G Mtpn myotrophin ISO RGD PMID:8144589 RGD:632797 NCBI chr 6:35,485,759...35,516,823
Ensembl chr 6:35,485,841...35,516,823
JBrowse link
G Nfix nuclear factor I/X involved_in
acts_upstream_of_or_within
IMP (PMID:23042739)
(PMID:21800304)
MGI PMID:21800304 PMID:23042739 NCBI chr 8:85,431,341...85,527,086
Ensembl chr 8:85,426,505...85,526,973
JBrowse link
G Nrxn1 neurexin I involved_in IGI (MGI:4839424|PMID:20537373) BHF-UCL PMID:20537373 MGI:4839424 NCBI chr17:90,341,072...91,400,587
Ensembl chr17:90,341,059...91,400,499
JBrowse link
G Ophn1 oligophrenin 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr  X:97,597,886...97,934,691
Ensembl chr  X:97,597,883...97,934,631
JBrowse link
G Prox1 prospero homeobox 1 involved_in IMP (MGI:4849596|PMID:20808958) BHF-UCL PMID:20808958 MGI:4849596 NCBI chr 1:189,850,232...189,903,024
Ensembl chr 1:189,850,232...189,902,911
JBrowse link
G Top2a topoisomerase (DNA) II alpha ISO RGD PMID:11170002 RGD:8693630 NCBI chr11:98,883,773...98,915,037
Ensembl chr11:98,883,769...98,915,015
JBrowse link
G Ulk1 unc-51 like kinase 1 acts_upstream_of_or_within IMP (PMID:10624947) MGI PMID:10624947 NCBI chr 5:110,932,355...110,957,991
Ensembl chr 5:110,932,354...110,957,963
JBrowse link
G Wnt7a