Nrxn1 (neurexin I) - Rat Genome Database

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Gene: Nrxn1 (neurexin I) Mus musculus
Analyze
Symbol: Nrxn1
Name: neurexin I
RGD ID: 734186
MGI Page MGI
Description: Enables several functions, including calcium channel regulator activity; calcium-dependent protein binding activity; and signaling receptor binding activity. Involved in several processes, including modulation of chemical synaptic transmission; regulation of synapse assembly; and synapse organization. Acts upstream of or within neurotransmitter secretion; positive regulation of synapse assembly; and positive regulation of synapse maturation. Located in several cellular components, including axonal growth cone; nuclear membrane; and presynaptic membrane. Part of protein complex involved in cell-cell adhesion. Is active in several cellular components, including GABA-ergic synapse; Schaffer collateral - CA1 synapse; and presynaptic active zone membrane. Is expressed in several structures, including adrenal gland; limb; nervous system; oral epithelium; and sensory organ. Used to study autism spectrum disorder and schizophrenia. Human ortholog(s) of this gene implicated in Pitt-Hopkins-like syndrome 2. Orthologous to human NRXN1 (neurexin 1).
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: 1700062G21Rik; 9330127H16Rik; A230068P09Rik; alpha-latrotoxin receptor (calcium-dependent); mKIAA0578; neurexin 1 NRXN1+7a; neurexin 1 NRXN1-7; neurexin I alpha; neurexin I beta; neurexin I-alpha; Neurexin I-beta; neurexin-1; neurexin-1-alpha; Neurexin-1-beta
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391790,341,072 - 91,400,587 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1790,341,059 - 91,400,499 (-)EnsemblGRCm39 Ensembl
GRCm381790,033,644 - 91,093,159 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1790,033,631 - 91,093,071 (-)EnsemblGRCm38mm10GRCm38
MGSCv371790,432,984 - 91,492,142 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361790,433,296 - 91,492,142 (-)NCBIMGSCv36mm8
Celera1794,417,402 - 95,489,954 (-)NCBICelera
Cytogenetic Map17E5NCBI
cM Map1759.73NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dimethylhydrazine  (EXP)
17alpha-ethynylestradiol  (EXP,ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (ISO)
3,4-methylenedioxymethamphetamine  (EXP)
4,4'-diaminodiphenylmethane  (EXP)
4,4'-sulfonyldiphenol  (EXP,ISO)
5-aza-2'-deoxycytidine  (ISO)
6-propyl-2-thiouracil  (ISO)
aflatoxin B1  (ISO)
aldicarb  (ISO)
all-trans-retinoic acid  (ISO)
amitrole  (ISO)
ammonium chloride  (ISO)
androgen antagonist  (ISO)
antimycin A  (ISO)
antirheumatic drug  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
benzo[a]pyrene  (EXP,ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
Butylparaben  (ISO)
cadmium dichloride  (ISO)
calcium atom  (EXP)
calcium(0)  (EXP)
carbon nanotube  (EXP)
CGP 52608  (ISO)
chloroprene  (ISO)
Cuprizon  (ISO)
DDE  (ISO)
DDT  (ISO)
deguelin  (ISO)
dibenz[a,h]anthracene  (EXP)
dibutyl phthalate  (ISO)
dichlorine  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
enzacamene  (ISO)
epoxiconazole  (ISO)
ethanol  (EXP)
fenpyroximate  (ISO)
folic acid  (EXP)
fulvestrant  (ISO)
furan  (ISO)
genistein  (EXP,ISO)
glutathione  (ISO)
glyphosate  (ISO)
hyaluronic acid  (ISO)
hydrogen peroxide  (ISO)
inulin  (EXP)
L-ascorbic acid  (ISO)
lead tetraacetate  (EXP)
lead(0)  (ISO)
linuron  (ISO)
methimazole  (ISO)
methotrexate  (EXP)
methoxychlor  (ISO)
methylmercury chloride  (ISO)
N,N-diethyl-m-toluamide  (ISO)
N-acetyl-L-cysteine  (ISO)
nickel atom  (ISO)
orphenadrine  (ISO)
ozone  (ISO)
paracetamol  (EXP,ISO)
pentetrazol  (ISO)
perfluorooctane-1-sulfonic acid  (EXP)
permethrin  (ISO)
phenylmercury acetate  (ISO)
picoxystrobin  (ISO)
pirinixic acid  (EXP)
potassium dichromate  (EXP)
prochloraz  (ISO)
procymidone  (ISO)
Ptaquiloside  (EXP)
pyrimidifen  (ISO)
rotenone  (ISO)
S-adenosyl-L-methioninate  (ISO)
S-adenosyl-L-methionine  (ISO)
SB 431542  (ISO)
sodium arsenite  (EXP,ISO)
sulfadimethoxine  (ISO)
tebufenpyrad  (ISO)
testosterone  (EXP)
tetrachloromethane  (EXP,ISO)
thalidomide  (ISO)
thifluzamide  (ISO)
trichostatin A  (ISO)
triclosan  (ISO)
trimellitic anhydride  (EXP)
troglitazone  (EXP)
tungsten  (EXP)
valproic acid  (ISO)
vinclozolin  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
adult behavior  (IMP,ISO)
angiogenesis  (IEA)
calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules  (IDA,NAS)
cell adhesion  (IEA)
cell-cell adhesion involved in synapse maturation  (NAS)
cellular response to calcium ion  (ISO)
cerebellar granule cell differentiation  (IGI)
chemical synaptic transmission  (IGI)
circadian rhythm  (ISO)
establishment of protein localization  (IDA)
filopodium assembly  (IMP)
gamma-aminobutyric acid receptor clustering  (IDA)
gephyrin clustering involved in postsynaptic density assembly  (IDA)
guanylate kinase-associated protein clustering  (IDA)
heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules  (IDA,IGI)
learning  (IMP,ISO)
maintenance of synapse structure  (NAS)
negative regulation of filopodium assembly  (IDA)
negative regulation of gene expression  (ISO)
neuroligin clustering involved in postsynaptic membrane assembly  (IDA)
neuromuscular process controlling balance  (IMP,ISO)
neuron cell-cell adhesion  (IDA,NAS)
neuron maturation  (IDA)
neuron projection development  (ISO)
neuron projection morphogenesis  (NAS)
neurotransmitter secretion  (IGI,TAS)
NMDA glutamate receptor clustering  (IDA)
positive regulation of ERK1 and ERK2 cascade  (ISO)
positive regulation of excitatory postsynaptic potential  (IDA,IMP)
positive regulation of fibroblast growth factor receptor signaling pathway  (ISO)
positive regulation of gene expression  (ISO)
positive regulation of neuromuscular synaptic transmission  (NAS)
positive regulation of neuron projection development  (NAS)
positive regulation of peptidyl-serine phosphorylation  (ISO)
positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction  (ISO)
positive regulation of protein kinase A signaling  (ISO)
positive regulation of protein localization to plasma membrane  (IDA)
positive regulation of synapse assembly  (IGI)
positive regulation of synapse maturation  (IDA)
positive regulation of synaptic transmission, GABAergic  (NAS)
positive regulation of synaptic transmission, glutamatergic  (IDA,IMP,NAS)
postsynaptic density protein 95 clustering  (IDA)
postsynaptic membrane assembly  (IDA)
prepulse inhibition  (IMP)
presynapse assembly  (IDA,IMP,ISO)
presynaptic membrane assembly  (IDA)
protein localization to synapse  (IDA)
protein-containing complex assembly involved in synapse maturation  (IDA)
receptor localization to synapse  (IDA)
regulation of grooming behavior  (IMP)
regulation of postsynaptic density assembly  (IDA,IMP)
regulation of postsynaptic specialization assembly  (IDA,IMP)
regulation of presynapse assembly  (IDA,IMP)
regulation of synaptic vesicle cycle  (IDA,IMP)
regulation of trans-synaptic signaling by endocannabinoid, modulating synaptic transmission  (IDA,IMP)
signal transduction  (IDA,ISO)
social behavior  (ISO)
synapse assembly  (IDA,IGI,IMP,NAS)
synapse maturation  (NAS)
synaptic membrane adhesion  (IDA,IMP)
synaptic vesicle clustering  (IDA)
trans-synaptic signaling, modulating synaptic transmission  (IDA,IEP,IMP)
vesicle docking involved in exocytosis  (ISO)
vocal learning  (ISO)
vocalization behavior  (ISO)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal bone structure  (IEA)
abnormal CNS synaptic transmission  (IAGP)
abnormal excitatory postsynaptic currents  (IAGP)
abnormal GABA-mediated receptor currents  (IAGP)
abnormal miniature excitatory postsynaptic currents  (IAGP)
abnormal motor learning  (IAGP)
abnormal nervous system physiology  (IAGP)
abnormal nest building behavior  (IAGP)
abnormal paired-pulse inhibition  (IAGP)
abnormal synaptic depression  (IAGP)
abnormal synaptic glutamate release  (IAGP)
decreased circulating alkaline phosphatase level  (IEA)
decreased circulating cholesterol level  (IEA)
decreased circulating HDL cholesterol level  (IEA)
decreased circulating serum albumin level  (IEA)
decreased circulating total protein level  (IEA)
decreased CNS synapse formation  (IAGP)
decreased excitatory postsynaptic current amplitude  (IAGP)
decreased fasting circulating glucose level  (IEA)
decreased grip strength  (IEA)
decreased neurotransmitter release  (IAGP)
decreased prepulse inhibition  (IAGP)
decreased pulmonary respiratory rate  (IEA)
decreased synaptic glutamate release  (IAGP)
decreased total body fat amount  (IEA)
impaired glucose tolerance  (IEA)
increased circulating amylase level  (IEA)
increased circulating aspartate transaminase level  (IEA)
increased grooming behavior  (IAGP)
increased lean body mass  (IEA)
neonatal lethality, complete penetrance  (IAGP)
no abnormal phenotype detected  (IEA)
postnatal lethality, incomplete penetrance  (IAGP)
reduced AMPA-mediated synaptic currents  (IAGP)
reduced NMDA-mediated synaptic currents  (IAGP)
respiratory distress  (IAGP)
tremors  (IEA)
References

References - curated
# Reference Title Reference Citation
1. Phenotypic characterization of nonsocial behavioral impairment in neurexin 1a knockout rats. Esclassan F, etal., Behav Neurosci. 2015 Feb;129(1):74-85. doi: 10.1037/bne0000024. Epub 2014 Nov 24.
2. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. MGD IEA MGD IEA
5. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
6. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
7. Gene expression analysis of spontaneously hypertensive rat cerebral cortex following transient focal cerebral ischemia. Raghavendra Rao VL, etal., J Neurochem 2002 Dec;83(5):1072-86.
8. Mouse MP Annotation Import Pipeline RGD automated import pipeline
9. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
10. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:7722633   PMID:8889548   PMID:9223334   PMID:9430716   PMID:9448462   PMID:10349636   PMID:10408888   PMID:11042159   PMID:11076861   PMID:11171101   PMID:11243866   PMID:11741895  
PMID:12036300   PMID:12465718   PMID:12477932   PMID:12796785   PMID:12827191   PMID:14522992   PMID:14983056   PMID:15489334   PMID:15620359   PMID:15858059   PMID:16141072   PMID:16141073  
PMID:16186258   PMID:16242404   PMID:16406382   PMID:16602821   PMID:16846852   PMID:16919269   PMID:16987237   PMID:17035546   PMID:17347997   PMID:17360903   PMID:17582332   PMID:18084303  
PMID:18799693   PMID:19036990   PMID:19098102   PMID:19567877   PMID:19816407   PMID:19822762   PMID:19926856   PMID:20537373   PMID:20869594   PMID:21149722   PMID:21262241   PMID:21267068  
PMID:21356198   PMID:21410790   PMID:21424692   PMID:21559374   PMID:21677750   PMID:22196734   PMID:22235116   PMID:22348092   PMID:22457515   PMID:22768092   PMID:22832527   PMID:23010509  
PMID:23141067   PMID:23358245   PMID:23840597   PMID:23875667   PMID:24094106   PMID:24194600   PMID:24613359   PMID:24952961   PMID:25017069   PMID:25036961   PMID:25423136   PMID:25693924  
PMID:25737549   PMID:26213384   PMID:26403076   PMID:26446217   PMID:26595880   PMID:26771491   PMID:27050589   PMID:27229316   PMID:27452274   PMID:27507650   PMID:27626380   PMID:27779093  
PMID:27872870   PMID:27889896   PMID:27979975   PMID:28154140   PMID:28194405   PMID:28355182   PMID:28472659   PMID:28671696   PMID:28794184   PMID:29107521   PMID:29504935   PMID:29782851  
PMID:30100184   PMID:30104341   PMID:30262834   PMID:30683685   PMID:30858964   PMID:30871858   PMID:30988517   PMID:30995482   PMID:31005376   PMID:31262725   PMID:31368584   PMID:31658245  
PMID:31812984   PMID:31823470   PMID:31995730   PMID:32134527   PMID:32684634   PMID:32706374   PMID:32973045   PMID:33058888   PMID:33274715   PMID:33355091   PMID:33626349   PMID:33888718  
PMID:34133920   PMID:34320240   PMID:34321999   PMID:34848499   PMID:34919427   PMID:35385735   PMID:36205393   PMID:36395107   PMID:36417873   PMID:36709330   PMID:36848371   PMID:37384525  
PMID:37543682   PMID:37591863   PMID:38187761   PMID:38355793   PMID:38505753   PMID:38571813   PMID:38891114  


Genomics

Comparative Map Data
Nrxn1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391790,341,072 - 91,400,587 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1790,341,059 - 91,400,499 (-)EnsemblGRCm39 Ensembl
GRCm381790,033,644 - 91,093,159 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1790,033,631 - 91,093,071 (-)EnsemblGRCm38mm10GRCm38
MGSCv371790,432,984 - 91,492,142 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361790,433,296 - 91,492,142 (-)NCBIMGSCv36mm8
Celera1794,417,402 - 95,489,954 (-)NCBICelera
Cytogenetic Map17E5NCBI
cM Map1759.73NCBI
NRXN1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38249,918,503 - 51,032,132 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl249,918,503 - 51,225,575 (-)EnsemblGRCh38hg38GRCh38
GRCh37250,145,641 - 51,259,270 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36250,000,992 - 51,113,178 (-)NCBINCBI36Build 36hg18NCBI36
Build 34250,059,138 - 50,486,545NCBI
Celera249,985,850 - 51,099,841 (-)NCBICelera
Cytogenetic Map2p16.3NCBI
HuRef249,879,094 - 50,994,141 (-)NCBIHuRef
CHM1_1250,076,199 - 51,190,490 (-)NCBICHM1_1
T2T-CHM13v2.0249,914,520 - 51,028,290 (-)NCBIT2T-CHM13v2.0
Nrxn1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr868,931,360 - 10,077,381 (+)NCBIGRCr8
mRatBN7.263,177,788 - 4,323,848 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl63,177,897 - 4,322,710 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx63,476,659 - 4,613,908 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.063,786,080 - 4,923,338 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.063,310,521 - 4,447,776 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0613,886,757 - 15,191,660 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl613,886,740 - 15,191,660 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0624,704,937 - 25,145,167 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.0623,843,153 - 24,482,073 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4614,050,929 - 15,354,069 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1615,245,705 - 15,354,069 (-)NCBI
Celera62,975,004 - 4,118,378 (+)NCBICelera
Cytogenetic Map6q11-q12NCBI
Nrxn1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544116,234,070 - 17,178,005 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495544116,230,977 - 17,178,003 (-)NCBIChiLan1.0ChiLan1.0
NRXN1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21275,325,549 - 76,440,534 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A75,329,515 - 76,444,501 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A50,063,398 - 51,178,659 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A50,981,997 - 52,095,538 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A50,985,067 - 52,091,277 (-)Ensemblpanpan1.1panPan2
NRXN1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11051,555,660 - 52,666,774 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1051,558,452 - 52,667,569 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1051,401,804 - 52,511,290 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01052,431,369 - 53,560,787 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1052,431,572 - 53,564,557 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11052,126,286 - 53,234,452 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01052,413,764 - 53,524,238 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01052,609,896 - 53,719,985 (-)NCBIUU_Cfam_GSD_1.0
Nrxn1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629230,455,821 - 31,526,486 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049365081,889,640 - 2,954,039 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NRXN1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl389,803,519 - 90,382,034 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1389,799,426 - 90,914,205 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2395,543,189 - 96,298,412 (+)NCBISscrofa10.2Sscrofa10.2susScr3
NRXN1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11456,051,849 - 57,202,334 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604554,638,899 - 55,766,868 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Nrxn1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473831,133,346 - 32,273,565 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473831,134,551 - 32,273,596 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Nrxn1
40421 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:3081
Count of miRNA genes:781
Interacting mature miRNAs:1025
Transcripts:ENSMUST00000054059, ENSMUST00000072671, ENSMUST00000159419, ENSMUST00000159778, ENSMUST00000160467, ENSMUST00000160800, ENSMUST00000160844, ENSMUST00000161102, ENSMUST00000161402, ENSMUST00000161637, ENSMUST00000162002, ENSMUST00000162227, ENSMUST00000172466, ENSMUST00000173222, ENSMUST00000173917, ENSMUST00000174331, ENSMUST00000174337, ENSMUST00000176118, ENSMUST00000176174, ENSMUST00000176918, ENSMUST00000177342
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357447Heal13_mwound healing/regeneration 13 (mouse)Not determined175710765191107803Mouse
4141758Pstc5_mperiosteal circumference 5 (mouse)Not determined175710765191107803Mouse
4141011Bmd26_mbone mineral density 26 (mouse)Not determined175710765191107803Mouse
1300735Pgia20_mproteoglycan induced arthritis 20 (mouse)Not determined175710765191107803Mouse
12910536Nrq8a_mnoise-induced hearing loss resistant QTL 8a (mouse)175710765191107803Mouse
12910537Nrq8_mnoise-induced hearing loss resistant QTL 8 (mouse)175710765191107803Mouse
4142414Pregq4_mpregnancy QTL 4 (mouse)Not determined175753444793507179Mouse
4141040Hmtb9_mhemostasis and thrombosis rebleeding time 9 (mouse)Not determined5758908991589197Mouse
1301107Scc4_mcolon tumor susceptibility 4 (mouse)Not determined176230101095294699Mouse
11528551Sluc32_msusceptibility to lung cancer 32 (mouse)176230101095294699Mouse
1302017Aliq3_macute lung injury QTL 3 (mouse)Not determined176388554895294699Mouse
1301728Ffal1_mfree fatty acid level 1 (mouse)Not determined176521493895294699Mouse
14928308Manh82_mmandible shape 82 (mouse)176631524395294699Mouse
4142256Nilac12_mnicotine induced locomotor activity 12 (mouse)Not determined176894131995294699Mouse
11039500Ltpr7c_mLeishmania tropica response 7c (mouse)177070119895294699Mouse
11039498Ltpr7b_mLeishmania tropica response 7b (mouse)177070119895294699Mouse
11039499Ltpr7a_mLeishmania tropica response 7a (mouse)177070119895294699Mouse
11039514Ltpr7_mLeishmania tropica response 7 (mouse)177070119895294699Mouse
1357528Nhdlq3_mnon-HDL QTL 3 (mouse)Not determined177339513295294699Mouse
4141195Nilac11_mnicotine induced locomotor activity 11 (mouse)Not determined177339513295294699Mouse
4141697Hbnr3_mHeligmosomoides bakeri nematode resistance 3 (mouse)Not determined7410765193507179Mouse
1357646Axtq3_manxiety QTL 3 (mouse)Not determined177458908990395270Mouse
1357552Aaj4_manxiety in A/J 4 (mouse)Not determined177458908990395270Mouse
14697708Stsl5_mSalmonella typhimurium susceptibility locus 5 (mouse)178080742991407428Mouse

Markers in Region
D17Mit221  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381790,087,704 - 90,087,842UniSTSGRCm38
MGSCv371790,487,044 - 90,487,182UniSTSGRCm37
Cytogenetic Map17E5UniSTS
cM Map1756.7UniSTS
Whitehead Genetic1750.3UniSTS
Whitehead_YAC17 UniSTS
D17Mit244  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381790,854,524 - 90,854,645UniSTSGRCm38
MGSCv371791,253,864 - 91,253,985UniSTSGRCm37
Celera1795,246,616 - 95,246,761UniSTS
Cytogenetic Map17E5UniSTS
cM Map1755.7UniSTS
Whitehead Genetic1749.2UniSTS
Whitehead/MRC_RH171115.78UniSTS
Whitehead_YAC17 UniSTS
D17Mit96.2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381791,047,467 - 91,047,597UniSTSGRCm38
MGSCv371791,446,807 - 91,446,937UniSTSGRCm37
Celera1795,444,594 - 95,444,724UniSTS
Cytogenetic Map17E5UniSTS
cM Map1754.6UniSTS
cM Map17 UniSTS
Whitehead Genetic1748.1UniSTS
D17Mit96  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381791,047,347 - 91,047,495UniSTSGRCm38
MGSCv371791,446,687 - 91,446,835UniSTSGRCm37
Celera1795,444,476 - 95,444,622UniSTS
Cytogenetic Map17E5UniSTS
cM Map1754.6UniSTS
Whitehead Genetic1748.1UniSTS
UniSTS:225195  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381790,453,181 - 90,453,357UniSTSGRCm38
MGSCv371790,852,521 - 90,852,697UniSTSGRCm37
Celera1794,839,653 - 94,839,829UniSTS
Cytogenetic Map17E5UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001346957 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346958 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346959 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346960 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346961 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346962 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001347419 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403319 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403320 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403321 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403322 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403323 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403324 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403325 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403326 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403327 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403328 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403329 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403330 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403331 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403332 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_020252 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_177284 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006523811 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006523812 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006523816 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011246318 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017317294 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017317296 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017317297 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017317300 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017317301 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017317303 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017317304 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017317306 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017317307 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017317308 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017317309 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017317310 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030249558 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030249559 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030249561 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160367 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160368 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160369 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160372 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160373 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160374 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160379 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160381 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160382 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160384 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160386 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160387 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160388 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160390 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160391 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAHY01135804 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB093249 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC101872 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC131326 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC151286 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC154325 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC154599 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC167814 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC170901 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC171209 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AEKQ02080704 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF387674 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ006802 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK005349 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK017578 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK032032 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK033952 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK034500 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK037724 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK038553 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK038854 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK045351 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK045582 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK046077 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK080992 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK133271 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK137407 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK139280 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK141567 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK163484 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC079893 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY256697 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466537 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT025708 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT486002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KC747116 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000054059   ⟹   ENSMUSP00000057294
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1790,344,308 - 91,396,154 (-)Ensembl
GRCm38.p6 Ensembl1790,036,880 - 91,088,726 (-)Ensembl
RefSeq Acc Id: ENSMUST00000072671   ⟹   ENSMUSP00000072458
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1790,341,059 - 91,396,335 (-)Ensembl
GRCm38.p6 Ensembl1790,033,631 - 91,088,907 (-)Ensembl
RefSeq Acc Id: ENSMUST00000159419
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1791,010,604 - 91,400,219 (-)Ensembl
GRCm38.p6 Ensembl1790,703,176 - 91,092,791 (-)Ensembl
RefSeq Acc Id: ENSMUST00000159778   ⟹   ENSMUSP00000125561
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1790,343,228 - 90,763,300 (-)Ensembl
GRCm38.p6 Ensembl1790,035,800 - 90,455,872 (-)Ensembl
RefSeq Acc Id: ENSMUST00000160467
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1791,007,359 - 91,400,199 (-)Ensembl
GRCm38.p6 Ensembl1790,699,931 - 91,092,771 (-)Ensembl
RefSeq Acc Id: ENSMUST00000160800   ⟹   ENSMUSP00000124561
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1790,344,324 - 91,400,161 (-)Ensembl
GRCm38.p6 Ensembl1790,036,896 - 91,092,733 (-)Ensembl
RefSeq Acc Id: ENSMUST00000160844   ⟹   ENSMUSP00000125407
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1790,341,072 - 91,400,499 (-)Ensembl
GRCm38.p6 Ensembl1790,033,644 - 91,093,071 (-)Ensembl
RefSeq Acc Id: ENSMUST00000161102
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1790,515,716 - 91,400,231 (-)Ensembl
GRCm38.p6 Ensembl1790,208,288 - 91,092,803 (-)Ensembl
RefSeq Acc Id: ENSMUST00000161402   ⟹   ENSMUSP00000124116
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1790,344,097 - 91,396,154 (-)Ensembl
GRCm38.p6 Ensembl1790,036,669 - 91,088,726 (-)Ensembl
RefSeq Acc Id: ENSMUST00000161637
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1790,842,634 - 91,395,911 (-)Ensembl
GRCm38.p6 Ensembl1790,535,206 - 91,088,483 (-)Ensembl
RefSeq Acc Id: ENSMUST00000162002
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1791,392,886 - 91,400,181 (-)Ensembl
GRCm38.p6 Ensembl1791,085,458 - 91,092,753 (-)Ensembl
RefSeq Acc Id: ENSMUST00000162227
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1790,927,476 - 90,937,455 (-)Ensembl
GRCm38.p6 Ensembl1790,620,048 - 90,630,027 (-)Ensembl
RefSeq Acc Id: ENSMUST00000172466   ⟹   ENSMUSP00000134402
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1790,344,324 - 90,763,378 (-)Ensembl
GRCm38.p6 Ensembl1790,036,896 - 90,455,950 (-)Ensembl
RefSeq Acc Id: ENSMUST00000173222   ⟹   ENSMUSP00000146701
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1790,344,281 - 90,395,568 (-)Ensembl
GRCm38.p6 Ensembl1790,036,853 - 90,088,140 (-)Ensembl
RefSeq Acc Id: ENSMUST00000173917   ⟹   ENSMUSP00000133389
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1790,343,698 - 90,395,828 (-)Ensembl
GRCm38.p6 Ensembl1790,036,270 - 90,088,400 (-)Ensembl
RefSeq Acc Id: ENSMUST00000174331   ⟹   ENSMUSP00000133491
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1790,342,846 - 91,396,343 (-)Ensembl
GRCm38.p6 Ensembl1790,035,418 - 91,088,915 (-)Ensembl
RefSeq Acc Id: ENSMUST00000174337   ⟹   ENSMUSP00000133724
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1790,343,725 - 90,763,314 (-)Ensembl
GRCm38.p6 Ensembl1790,036,297 - 90,455,886 (-)Ensembl
RefSeq Acc Id: ENSMUST00000176118   ⟹   ENSMUSP00000135241
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1790,670,222 - 90,896,270 (-)Ensembl
GRCm38.p6 Ensembl1790,362,794 - 90,588,842 (-)Ensembl
RefSeq Acc Id: ENSMUST00000176918
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1790,469,733 - 90,656,788 (-)Ensembl
GRCm38.p6 Ensembl1790,162,305 - 90,349,360 (-)Ensembl
RefSeq Acc Id: ENSMUST00000177342
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1790,897,344 - 90,937,652 (-)Ensembl
GRCm38.p6 Ensembl1790,589,916 - 90,630,224 (-)Ensembl
RefSeq Acc Id: ENSMUST00000196269
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1790,515,716 - 90,762,250 (-)Ensembl
GRCm38.p6 Ensembl1790,208,288 - 90,454,822 (-)Ensembl
RefSeq Acc Id: ENSMUST00000196559   ⟹   ENSMUSP00000142891
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1790,669,981 - 90,896,121 (-)Ensembl
GRCm38.p6 Ensembl1790,362,553 - 90,588,693 (-)Ensembl
RefSeq Acc Id: ENSMUST00000197104   ⟹   ENSMUSP00000142621
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1790,344,752 - 90,515,850 (-)Ensembl
GRCm38.p6 Ensembl1790,037,324 - 90,208,422 (-)Ensembl
RefSeq Acc Id: ENSMUST00000197224   ⟹   ENSMUSP00000142650
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1790,897,622 - 91,008,202 (-)Ensembl
GRCm38.p6 Ensembl1790,590,194 - 90,700,774 (-)Ensembl
RefSeq Acc Id: ENSMUST00000197268   ⟹   ENSMUSP00000142815
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1790,342,844 - 90,395,824 (-)Ensembl
GRCm38.p6 Ensembl1790,035,416 - 90,088,396 (-)Ensembl
RefSeq Acc Id: ENSMUST00000198899
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1790,761,205 - 90,764,001 (-)Ensembl
GRCm38.p6 Ensembl1790,453,777 - 90,456,573 (-)Ensembl
RefSeq Acc Id: NM_001346957   ⟹   NP_001333886
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,072 - 91,397,033 (-)NCBI
GRCm381790,033,644 - 91,089,605 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001346958   ⟹   NP_001333887
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,072 - 90,763,389 (-)NCBI
GRCm381790,033,644 - 90,455,880 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001346959   ⟹   NP_001333888
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,072 - 90,763,389 (-)NCBI
GRCm381790,033,644 - 90,455,880 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001346960   ⟹   NP_001333889
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,072 - 90,763,389 (-)NCBI
GRCm381790,033,644 - 90,455,880 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001346961   ⟹   NP_001333890
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,072 - 90,763,389 (-)NCBI
GRCm381790,033,644 - 90,455,880 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001346962   ⟹   NP_001333891
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,072 - 90,395,740 (-)NCBI
GRCm381790,033,644 - 90,088,368 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001347419   ⟹   NP_001334348
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,072 - 90,395,740 (-)NCBI
GRCm381790,033,644 - 90,088,368 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001403319   ⟹   NP_001390248
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,072 - 91,400,221 (-)NCBI
RefSeq Acc Id: NM_001403320   ⟹   NP_001390249
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,072 - 91,400,221 (-)NCBI
RefSeq Acc Id: NM_001403321   ⟹   NP_001390250
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,072 - 91,400,221 (-)NCBI
RefSeq Acc Id: NM_001403322   ⟹   NP_001390251
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,072 - 91,400,221 (-)NCBI
RefSeq Acc Id: NM_001403323   ⟹   NP_001390252
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,072 - 91,400,221 (-)NCBI
RefSeq Acc Id: NM_001403324   ⟹   NP_001390253
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,072 - 91,400,221 (-)NCBI
RefSeq Acc Id: NM_001403325   ⟹   NP_001390254
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,072 - 91,400,221 (-)NCBI
RefSeq Acc Id: NM_001403326   ⟹   NP_001390255
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,072 - 91,400,221 (-)NCBI
RefSeq Acc Id: NM_001403327   ⟹   NP_001390256
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,072 - 91,400,221 (-)NCBI
RefSeq Acc Id: NM_001403328   ⟹   NP_001390257
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,072 - 91,400,221 (-)NCBI
RefSeq Acc Id: NM_001403329   ⟹   NP_001390258
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,072 - 91,400,221 (-)NCBI
RefSeq Acc Id: NM_001403330   ⟹   NP_001390259
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,072 - 91,400,221 (-)NCBI
RefSeq Acc Id: NM_001403331   ⟹   NP_001390260
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,072 - 91,400,221 (-)NCBI
RefSeq Acc Id: NM_001403332   ⟹   NP_001390261
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,072 - 91,400,221 (-)NCBI
RefSeq Acc Id: NM_020252   ⟹   NP_064648
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,072 - 91,400,221 (-)NCBI
GRCm381790,033,644 - 91,092,802 (-)NCBI
MGSCv371790,432,984 - 91,492,142 (-)RGD
Celera1794,417,402 - 95,489,954 (-)RGD
cM Map17 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_177284   ⟹   NP_796258
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,072 - 91,400,221 (-)NCBI
GRCm381790,033,644 - 91,092,802 (-)NCBI
MGSCv371790,432,984 - 91,492,142 (-)RGD
Celera1794,417,402 - 95,489,954 (-)RGD
cM Map17 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006523811   ⟹   XP_006523874
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
GRCm381790,033,952 - 91,093,159 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006523812   ⟹   XP_006523875
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
GRCm381790,033,952 - 91,093,159 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006523816   ⟹   XP_006523879
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
GRCm381790,033,952 - 91,093,159 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011246318   ⟹   XP_011244620
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
GRCm381790,033,952 - 91,093,159 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017317294   ⟹   XP_017172783
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
GRCm381790,033,952 - 91,093,159 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017317296   ⟹   XP_017172785
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
GRCm381790,033,952 - 91,093,159 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017317297   ⟹   XP_017172786
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
GRCm381790,033,952 - 91,093,159 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017317300   ⟹   XP_017172789
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
GRCm381790,033,952 - 91,093,159 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017317301   ⟹   XP_017172790
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
GRCm381790,033,952 - 91,093,159 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017317303   ⟹   XP_017172792
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
GRCm381790,033,952 - 91,093,159 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017317304   ⟹   XP_017172793
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
GRCm381790,033,952 - 91,093,159 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017317306   ⟹   XP_017172795
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
GRCm381790,033,952 - 91,093,159 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017317307   ⟹   XP_017172796
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
GRCm381790,033,952 - 91,093,159 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017317308   ⟹   XP_017172797
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
GRCm381790,033,952 - 91,093,159 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017317309   ⟹   XP_017172798
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
GRCm381790,033,952 - 91,093,159 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017317310   ⟹   XP_017172799
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
GRCm381790,033,952 - 91,093,159 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030249558   ⟹   XP_030105418
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
GRCm381790,033,952 - 91,093,159 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030249559   ⟹   XP_030105419
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
GRCm381790,033,952 - 91,093,159 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030249561   ⟹   XP_030105421
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
GRCm381790,033,952 - 91,093,159 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036160367   ⟹   XP_036016260
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036160368   ⟹   XP_036016261
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036160369   ⟹   XP_036016262
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036160372   ⟹   XP_036016265
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036160373   ⟹   XP_036016266
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036160374   ⟹   XP_036016267
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036160379   ⟹   XP_036016272
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036160381   ⟹   XP_036016274
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036160382   ⟹   XP_036016275
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036160384   ⟹   XP_036016277
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036160386   ⟹   XP_036016279
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036160387   ⟹   XP_036016280
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
Sequence: