Nrxn1 (neurexin I) - Rat Genome Database

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Gene: Nrxn1 (neurexin I) Mus musculus
Analyze
Symbol: Nrxn1
Name: neurexin I
RGD ID: 734186
MGI Page MGI
Description: Enables several functions, including calcium channel regulator activity; calcium-dependent protein binding activity; and signaling receptor binding activity. Involved in several processes, including regulation of neurotransmitter receptor activity; regulation of synapse assembly; and synapse organization. Acts upstream of or within several processes, including regulation of insulin secretion involved in cellular response to glucose stimulus; regulation of synapse organization; and synapse assembly. Located in several cellular components, including axonal growth cone; glutamatergic synapse; and nuclear membrane. Is integral component of presynaptic active zone membrane. Part of protein-containing complex. Is active in GABA-ergic synapse and Schaffer collateral - CA1 synapse. Is integral component of presynaptic membrane. Is expressed in several structures, including adrenal gland; limb; nervous system; oral epithelium; and sensory organ. Used to study autism spectrum disorder and schizophrenia. Human ortholog(s) of this gene implicated in Pitt-Hopkins-like syndrome 2. Orthologous to human NRXN1 (neurexin 1).
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: 1700062G21Rik; 9330127H16Rik; A230068P09Rik; alpha-latrotoxin receptor (calcium-dependent); mKIAA0578; neurexin 1 NRXN1+7a; neurexin 1 NRXN1-7; neurexin I alpha; neurexin I beta; neurexin I-alpha; Neurexin I-beta; neurexin-1; neurexin-1-alpha; Neurexin-1-beta
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391790,341,072 - 91,400,587 (-)NCBIGRCm39mm39
GRCm39 Ensembl1790,341,059 - 91,400,499 (-)Ensembl
GRCm381790,033,644 - 91,093,159 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1790,033,631 - 91,093,071 (-)EnsemblGRCm38mm10GRCm38
MGSCv371790,432,984 - 91,492,142 (-)NCBIGRCm37mm9NCBIm37
MGSCv361790,433,296 - 91,492,142 (-)NCBImm8
Celera1794,417,402 - 95,489,954 (-)NCBICelera
Cytogenetic Map17E5NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dimethylhydrazine  (EXP)
17alpha-ethynylestradiol  (EXP,ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (ISO)
3,4-methylenedioxymethamphetamine  (EXP)
4,4'-diaminodiphenylmethane  (EXP)
4,4'-sulfonyldiphenol  (EXP)
5-aza-2'-deoxycytidine  (ISO)
aflatoxin B1  (ISO)
aldicarb  (ISO)
all-trans-retinoic acid  (ISO)
ammonium chloride  (ISO)
androgen antagonist  (ISO)
antimycin A  (ISO)
antirheumatic drug  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
benzo[a]pyrene  (EXP,ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
Butylparaben  (ISO)
cadmium dichloride  (ISO)
calcium atom  (EXP)
calcium(0)  (EXP)
carbon nanotube  (EXP)
chloroprene  (ISO)
Cuprizon  (ISO)
DDE  (ISO)
DDT  (ISO)
Deguelin  (ISO)
dibenz[a,h]anthracene  (EXP)
dibutyl phthalate  (ISO)
dichlorine  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
enzacamene  (ISO)
epoxiconazole  (ISO)
ethanol  (EXP)
fenpyroximate  (ISO)
folic acid  (EXP)
furan  (ISO)
genistein  (EXP,ISO)
glutathione  (ISO)
glyphosate  (ISO)
hyaluronic acid  (ISO)
hydrogen peroxide  (ISO)
L-ascorbic acid  (ISO)
lead tetraacetate  (EXP)
lead(0)  (ISO)
lead(2+)  (ISO)
linuron  (ISO)
methotrexate  (EXP)
methylmercury chloride  (ISO)
N,N-diethyl-m-toluamide  (ISO)
N-acetyl-L-cysteine  (ISO)
nickel atom  (ISO)
orphenadrine  (ISO)
ozone  (ISO)
paracetamol  (EXP,ISO)
pentetrazol  (ISO)
permethrin  (ISO)
phenylmercury acetate  (ISO)
picoxystrobin  (ISO)
pirinixic acid  (EXP)
potassium dichromate  (EXP)
prochloraz  (ISO)
procymidone  (ISO)
Ptaquiloside  (EXP)
pyrimidifen  (ISO)
rotenone  (ISO)
S-adenosyl-L-methioninate  (ISO)
S-adenosyl-L-methionine  (ISO)
SB 431542  (ISO)
sodium arsenite  (ISO)
tebufenpyrad  (ISO)
testosterone  (EXP)
tetrachloromethane  (EXP,ISO)
thifluzamide  (ISO)
trichostatin A  (ISO)
triclosan  (ISO)
trimellitic anhydride  (EXP)
troglitazone  (EXP)
tungsten  (EXP)
valproic acid  (ISO)
vinclozolin  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
adult behavior  (IMP,ISO)
angiogenesis  (IEA)
calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules  (IDA)
cell adhesion  (IEA)
cellular response to calcium ion  (ISO)
cerebellar granule cell differentiation  (IGI)
chemical synaptic transmission  (IGI)
circadian rhythm  (ISO)
establishment of protein localization  (IDA)
filopodium assembly  (IMP)
gamma-aminobutyric acid receptor clustering  (IDA)
gephyrin clustering involved in postsynaptic density assembly  (IDA)
guanylate kinase-associated protein clustering  (IDA)
heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules  (IDA,IGI)
learning  (IMP,ISO)
negative regulation of filopodium assembly  (IDA)
negative regulation of gene expression  (ISO)
neuroligin clustering involved in postsynaptic membrane assembly  (IDA)
neuromuscular process controlling balance  (IMP,ISO)
neuron cell-cell adhesion  (IDA)
neuron maturation  (IDA)
neuron projection development  (ISO)
neurotransmitter secretion  (IGI,TAS)
NMDA glutamate receptor clustering  (IDA)
positive regulation of ERK1 and ERK2 cascade  (ISO)
positive regulation of excitatory postsynaptic potential  (IDA,IMP)
positive regulation of fibroblast growth factor receptor signaling pathway  (ISO)
positive regulation of gene expression  (ISO)
positive regulation of peptidyl-serine phosphorylation  (ISO)
positive regulation of protein kinase A signaling  (ISO)
positive regulation of protein kinase B signaling  (ISO)
positive regulation of protein kinase C activity  (ISO)
positive regulation of protein localization to plasma membrane  (IDA)
positive regulation of synapse assembly  (IGI)
positive regulation of synapse maturation  (IDA)
positive regulation of synaptic transmission, glutamatergic  (IDA,IMP)
postsynaptic density protein 95 clustering  (IDA)
postsynaptic membrane assembly  (IDA)
prepulse inhibition  (IMP)
presynapse assembly  (ISO)
presynaptic membrane assembly  (IDA)
protein localization to synapse  (IDA)
protein-containing complex assembly involved in synapse maturation  (IDA)
receptor localization to synapse  (IDA)
regulation of AMPA receptor activity  (IDA)
regulation of grooming behavior  (IMP)
regulation of insulin secretion involved in cellular response to glucose stimulus  (IMP)
regulation of NMDA receptor activity  (IDA)
regulation of postsynaptic density assembly  (IDA,IMP)
regulation of postsynaptic specialization assembly  (IDA,IMP)
regulation of presynapse assembly  (IDA,IMP,IPI)
regulation of synaptic vesicle cycle  (IMP)
signal transduction  (IDA,ISO)
social behavior  (ISO)
synapse assembly  (IGI)
synaptic membrane adhesion  (IDA,IMP)
synaptic vesicle clustering  (IDA)
trans-synaptic signaling by endocannabinoid  (IMP)
vesicle docking involved in exocytosis  (ISO)
vocal learning  (ISO)
vocalization behavior  (ISO)

Phenotype Annotations     Click to see Annotation Detail View
References

Additional References at PubMed
PMID:7722633   PMID:8889548   PMID:9223334   PMID:9430716   PMID:9448462   PMID:10349636   PMID:10408888   PMID:11042159   PMID:11076861   PMID:11171101   PMID:11243866   PMID:11741895  
PMID:12036300   PMID:12465718   PMID:12477932   PMID:12796785   PMID:12827191   PMID:14522992   PMID:14983056   PMID:15489334   PMID:15620359   PMID:15858059   PMID:16141072   PMID:16141073  
PMID:16186258   PMID:16406382   PMID:16602821   PMID:16919269   PMID:16987237   PMID:17035546   PMID:17347997   PMID:17360903   PMID:18799693   PMID:19036990   PMID:19098102   PMID:19567877  
PMID:19816407   PMID:19822762   PMID:19926856   PMID:20537373   PMID:20869594   PMID:21149722   PMID:21262241   PMID:21267068   PMID:21356198   PMID:21410790   PMID:21424692   PMID:21559374  
PMID:21677750   PMID:22196734   PMID:22235116   PMID:22348092   PMID:22457515   PMID:22768092   PMID:22832527   PMID:23010509   PMID:23141067   PMID:23840597   PMID:23875667   PMID:24094106  
PMID:24194600   PMID:24613359   PMID:24952961   PMID:25017069   PMID:25036961   PMID:25423136   PMID:25693924   PMID:25737549   PMID:26213384   PMID:26403076   PMID:26446217   PMID:26595880  
PMID:26771491   PMID:27050589   PMID:27229316   PMID:27452274   PMID:27507650   PMID:27626380   PMID:27779093   PMID:27872870   PMID:27889896   PMID:27979975   PMID:28154140   PMID:28472659  
PMID:28671696   PMID:28794184   PMID:29782851   PMID:30104341   PMID:30262834   PMID:30683685   PMID:30858964   PMID:30871858   PMID:30988517   PMID:30995482   PMID:31005376   PMID:31262725  
PMID:31368584   PMID:31658245   PMID:31812984   PMID:31823470   PMID:31995730   PMID:32684634   PMID:33058888   PMID:33274715   PMID:33355091   PMID:34320240  


Genomics

Comparative Map Data
Nrxn1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391790,341,072 - 91,400,587 (-)NCBIGRCm39mm39
GRCm39 Ensembl1790,341,059 - 91,400,499 (-)Ensembl
GRCm381790,033,644 - 91,093,159 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1790,033,631 - 91,093,071 (-)EnsemblGRCm38mm10GRCm38
MGSCv371790,432,984 - 91,492,142 (-)NCBIGRCm37mm9NCBIm37
MGSCv361790,433,296 - 91,492,142 (-)NCBImm8
Celera1794,417,402 - 95,489,954 (-)NCBICelera
Cytogenetic Map17E5NCBI
NRXN1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl249,918,503 - 51,225,575 (-)EnsemblGRCh38hg38GRCh38
GRCh38249,918,503 - 51,032,132 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37250,145,641 - 51,259,270 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36250,000,992 - 51,113,178 (-)NCBINCBI36hg18NCBI36
Build 34250,059,138 - 50,486,545NCBI
Celera249,985,850 - 51,099,841 (-)NCBI
Cytogenetic Map2p16.3NCBI
HuRef249,879,094 - 50,994,141 (-)NCBIHuRef
CHM1_1250,076,199 - 51,190,490 (-)NCBICHM1_1
Nrxn1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.263,177,788 - 4,323,848 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl63,177,897 - 4,322,710 (+)Ensembl
Rnor_6.0613,886,757 - 15,191,660 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl613,886,740 - 15,191,660 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0624,704,937 - 25,145,167 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.0623,843,153 - 24,482,073 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4614,050,929 - 15,354,069 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1615,245,705 - 15,354,069 (-)NCBI
Celera62,975,004 - 4,118,378 (+)NCBICelera
Cytogenetic Map6q12NCBI
Nrxn1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544116,234,070 - 17,178,005 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495544116,230,977 - 17,178,003 (-)NCBIChiLan1.0ChiLan1.0
NRXN1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.12A50,981,997 - 52,095,538 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A50,985,067 - 52,091,277 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v02A50,063,398 - 51,178,659 (-)NCBIMhudiblu_PPA_v0panPan3
NRXN1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11051,555,660 - 52,666,774 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1051,558,452 - 52,667,569 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1051,401,804 - 52,511,290 (-)NCBI
ROS_Cfam_1.01052,431,369 - 53,560,787 (-)NCBI
UMICH_Zoey_3.11052,126,286 - 53,234,452 (-)NCBI
UNSW_CanFamBas_1.01052,413,764 - 53,524,238 (-)NCBI
UU_Cfam_GSD_1.01052,609,896 - 53,719,985 (-)NCBI
Nrxn1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629230,455,821 - 31,526,486 (+)NCBI
SpeTri2.0NW_0049365081,889,640 - 2,954,039 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NRXN1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl389,799,543 - 90,914,205 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1389,799,426 - 90,914,205 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2395,543,189 - 96,298,412 (+)NCBISscrofa10.2Sscrofa10.2susScr3
NRXN1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11456,051,849 - 57,202,334 (+)NCBI
Vero_WHO_p1.0NW_02366604554,638,899 - 55,766,868 (-)NCBI
Nrxn1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473831,134,551 - 32,273,596 (-)NCBI

Position Markers
D17Mit221  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381790,087,704 - 90,087,842UniSTSGRCm38
MGSCv371790,487,044 - 90,487,182UniSTSGRCm37
Cytogenetic Map17E5UniSTS
cM Map1756.7UniSTS
Whitehead Genetic1750.3UniSTS
Whitehead_YAC17 UniSTS
D17Mit244  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381790,854,524 - 90,854,645UniSTSGRCm38
MGSCv371791,253,864 - 91,253,985UniSTSGRCm37
Celera1795,246,616 - 95,246,761UniSTS
Cytogenetic Map17E5UniSTS
cM Map1755.7UniSTS
Whitehead Genetic1749.2UniSTS
Whitehead/MRC_RH171115.78UniSTS
Whitehead_YAC17 UniSTS
D17Mit96.2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381791,047,467 - 91,047,597UniSTSGRCm38
MGSCv371791,446,807 - 91,446,937UniSTSGRCm37
Celera1795,444,594 - 95,444,724UniSTS
Cytogenetic Map17E5UniSTS
cM Map1754.6UniSTS
cM Map17 UniSTS
Whitehead Genetic1748.1UniSTS
D17Mit96  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381791,047,347 - 91,047,495UniSTSGRCm38
MGSCv371791,446,687 - 91,446,835UniSTSGRCm37
Celera1795,444,476 - 95,444,622UniSTS
Cytogenetic Map17E5UniSTS
cM Map1754.6UniSTS
Whitehead Genetic1748.1UniSTS
UniSTS:225195  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381790,453,181 - 90,453,357UniSTSGRCm38
MGSCv371790,852,521 - 90,852,697UniSTSGRCm37
Celera1794,839,653 - 94,839,829UniSTS
Cytogenetic Map17E5UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4141758Pstc5_mperiosteal circumference 5 (mouse)Not determined175680065690800808Mouse
4141011Bmd26_mbone mineral density 26 (mouse)Not determined175680065690800808Mouse
1300735Pgia20_mproteoglycan induced arthritis 20 (mouse)Not determined175680065690800808Mouse
1357447Heal13_mwound healing/regeneration 13 (mouse)Not determined175680065690800808Mouse
12910536Nrq8a_mnoise-induced hearing loss resistant QTL 8a (mouse)175680065690800808Mouse
12910537Nrq8_mnoise-induced hearing loss resistant QTL 8 (mouse)175680065690800808Mouse
4142414Pregq4_mpregnancy QTL 4 (mouse)Not determined175722744793199751Mouse
4141040Hmtb9_mhemostasis and thrombosis rebleeding time 9 (mouse)Not determined5728209491282202Mouse
1301107Scc4_mcolon tumor susceptibility 4 (mouse)Not determined176199358194987271Mouse
11528551Sluc32_msusceptibility to lung cancer 32 (mouse)176199358194987271Mouse
1302017Aliq3_macute lung injury QTL 3 (mouse)Not determined176357811994987271Mouse
1301728Ffal1_mfree fatty acid level 1 (mouse)Not determined176490750994987271Mouse
14928308Manh82_mmandible shape 82 (mouse)176600781494987271Mouse
4142256Nilac12_mnicotine induced locomotor activity 12 (mouse)Not determined176863389194987271Mouse
11039498Ltpr7b_mLeishmania tropica response 7b (mouse)177039377094987271Mouse
11039499Ltpr7a_mLeishmania tropica response 7a (mouse)177039377094987271Mouse
11039500Ltpr7c_mLeishmania tropica response 7c (mouse)177039377094987271Mouse
11039514Ltpr7_mLeishmania tropica response 7 (mouse)177039377094987271Mouse
1357528Nhdlq3_mnon-HDL QTL 3 (mouse)Not determined177308770494987271Mouse
4141195Nilac11_mnicotine induced locomotor activity 11 (mouse)Not determined177308770494987271Mouse
4141697Hbnr3_mHeligmosomoides bakeri nematode resistance 3 (mouse)Not determined7380065693199751Mouse
1357552Aaj4_manxiety in A/J 4 (mouse)Not determined177428209490087842Mouse
1357646Axtq3_manxiety QTL 3 (mouse)Not determined177428209490087842Mouse
14697708Stsl5_mSalmonella typhimurium susceptibility locus 5 (mouse)178050000091100000Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:3081
Count of miRNA genes:781
Interacting mature miRNAs:1025
Transcripts:ENSMUST00000054059, ENSMUST00000072671, ENSMUST00000159419, ENSMUST00000159778, ENSMUST00000160467, ENSMUST00000160800, ENSMUST00000160844, ENSMUST00000161102, ENSMUST00000161402, ENSMUST00000161637, ENSMUST00000162002, ENSMUST00000162227, ENSMUST00000172466, ENSMUST00000173222, ENSMUST00000173917, ENSMUST00000174331, ENSMUST00000174337, ENSMUST00000176118, ENSMUST00000176174, ENSMUST00000176918, ENSMUST00000177342
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001346957 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346958 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346959 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346960 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346961 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346962 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001347419 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_020252 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_177284 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006523811 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006523812 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006523815 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006523816 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011246318 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017317294 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017317296 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017317297 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017317300 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017317301 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017317303 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017317304 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017317306 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017317307 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017317308 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017317309 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017317310 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030249558 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030249559 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030249561 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030249562 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160367 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160368 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160369 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160370 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160371 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160372 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160373 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160374 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160375 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160376 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160377 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160378 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160379 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160380 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160381 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160382 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160383 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160384 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160385 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160386 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160387 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160388 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160389 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160390 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160391 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160392 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160393 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAHY01135804 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB093249 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC101872 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC131326 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC151286 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC154325 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC154599 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC167814 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC170901 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC171209 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AEKQ02080704 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF387674 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ006802 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK005349 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK017578 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK032032 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK033952 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK034500 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK037724 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK038553 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK038854 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK045351 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK045582 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK046077 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK080992 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK133271 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK137407 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK139280 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK141567 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK163484 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC079893 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY256697 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466537 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT025708 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT486002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KC747116 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000054059   ⟹   ENSMUSP00000057294
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1790,344,308 - 91,396,154 (-)Ensembl
GRCm38.p6 Ensembl1790,036,880 - 91,088,726 (-)Ensembl
RefSeq Acc Id: ENSMUST00000072671   ⟹   ENSMUSP00000072458
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1790,341,059 - 91,396,335 (-)Ensembl
GRCm38.p6 Ensembl1790,033,631 - 91,088,907 (-)Ensembl
RefSeq Acc Id: ENSMUST00000159419
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1791,010,604 - 91,400,219 (-)Ensembl
GRCm38.p6 Ensembl1790,703,176 - 91,092,791 (-)Ensembl
RefSeq Acc Id: ENSMUST00000159778   ⟹   ENSMUSP00000125561
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1790,343,228 - 90,763,300 (-)Ensembl
GRCm38.p6 Ensembl1790,035,800 - 90,455,872 (-)Ensembl
RefSeq Acc Id: ENSMUST00000160467
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1791,007,359 - 91,400,199 (-)Ensembl
GRCm38.p6 Ensembl1790,699,931 - 91,092,771 (-)Ensembl
RefSeq Acc Id: ENSMUST00000160800   ⟹   ENSMUSP00000124561
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1790,344,324 - 91,400,161 (-)Ensembl
GRCm38.p6 Ensembl1790,036,896 - 91,092,733 (-)Ensembl
RefSeq Acc Id: ENSMUST00000160844   ⟹   ENSMUSP00000125407
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1790,341,072 - 91,400,499 (-)Ensembl
GRCm38.p6 Ensembl1790,033,644 - 91,093,071 (-)Ensembl
RefSeq Acc Id: ENSMUST00000161102
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1790,515,716 - 91,400,231 (-)Ensembl
GRCm38.p6 Ensembl1790,208,288 - 91,092,803 (-)Ensembl
RefSeq Acc Id: ENSMUST00000161402   ⟹   ENSMUSP00000124116
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1790,344,097 - 91,396,154 (-)Ensembl
GRCm38.p6 Ensembl1790,036,669 - 91,088,726 (-)Ensembl
RefSeq Acc Id: ENSMUST00000161637
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1790,842,634 - 91,395,911 (-)Ensembl
GRCm38.p6 Ensembl1790,535,206 - 91,088,483 (-)Ensembl
RefSeq Acc Id: ENSMUST00000162002
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1791,392,886 - 91,400,181 (-)Ensembl
GRCm38.p6 Ensembl1791,085,458 - 91,092,753 (-)Ensembl
RefSeq Acc Id: ENSMUST00000162227
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1790,927,476 - 90,937,455 (-)Ensembl
GRCm38.p6 Ensembl1790,620,048 - 90,630,027 (-)Ensembl
RefSeq Acc Id: ENSMUST00000172466   ⟹   ENSMUSP00000134402
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1790,344,324 - 90,763,378 (-)Ensembl
GRCm38.p6 Ensembl1790,036,896 - 90,455,950 (-)Ensembl
RefSeq Acc Id: ENSMUST00000173222   ⟹   ENSMUSP00000146701
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1790,344,281 - 90,395,568 (-)Ensembl
GRCm38.p6 Ensembl1790,036,853 - 90,088,140 (-)Ensembl
RefSeq Acc Id: ENSMUST00000173917   ⟹   ENSMUSP00000133389
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1790,343,698 - 90,395,828 (-)Ensembl
GRCm38.p6 Ensembl1790,036,270 - 90,088,400 (-)Ensembl
RefSeq Acc Id: ENSMUST00000174331   ⟹   ENSMUSP00000133491
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1790,342,846 - 91,396,343 (-)Ensembl
GRCm38.p6 Ensembl1790,035,418 - 91,088,915 (-)Ensembl
RefSeq Acc Id: ENSMUST00000174337   ⟹   ENSMUSP00000133724
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1790,343,725 - 90,763,314 (-)Ensembl
GRCm38.p6 Ensembl1790,036,297 - 90,455,886 (-)Ensembl
RefSeq Acc Id: ENSMUST00000176118   ⟹   ENSMUSP00000135241
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1790,670,222 - 90,896,270 (-)Ensembl
GRCm38.p6 Ensembl1790,362,794 - 90,588,842 (-)Ensembl
RefSeq Acc Id: ENSMUST00000176918
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1790,469,733 - 90,656,788 (-)Ensembl
GRCm38.p6 Ensembl1790,162,305 - 90,349,360 (-)Ensembl
RefSeq Acc Id: ENSMUST00000177342
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1790,897,344 - 90,937,652 (-)Ensembl
GRCm38.p6 Ensembl1790,589,916 - 90,630,224 (-)Ensembl
RefSeq Acc Id: ENSMUST00000196269
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1790,515,716 - 90,762,250 (-)Ensembl
GRCm38.p6 Ensembl1790,208,288 - 90,454,822 (-)Ensembl
RefSeq Acc Id: ENSMUST00000196559   ⟹   ENSMUSP00000142891
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1790,669,981 - 90,896,121 (-)Ensembl
GRCm38.p6 Ensembl1790,362,553 - 90,588,693 (-)Ensembl
RefSeq Acc Id: ENSMUST00000197104   ⟹   ENSMUSP00000142621
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1790,344,752 - 90,515,850 (-)Ensembl
GRCm38.p6 Ensembl1790,037,324 - 90,208,422 (-)Ensembl
RefSeq Acc Id: ENSMUST00000197224   ⟹   ENSMUSP00000142650
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1790,897,622 - 91,008,202 (-)Ensembl
GRCm38.p6 Ensembl1790,590,194 - 90,700,774 (-)Ensembl
RefSeq Acc Id: ENSMUST00000197268   ⟹   ENSMUSP00000142815
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1790,342,844 - 90,395,824 (-)Ensembl
GRCm38.p6 Ensembl1790,035,416 - 90,088,396 (-)Ensembl
RefSeq Acc Id: ENSMUST00000198899
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1790,761,205 - 90,764,001 (-)Ensembl
GRCm38.p6 Ensembl1790,453,777 - 90,456,573 (-)Ensembl
RefSeq Acc Id: NM_001346957   ⟹   NP_001333886
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,072 - 91,397,033 (-)NCBI
GRCm381790,033,644 - 91,089,605 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001346958   ⟹   NP_001333887
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,072 - 90,763,308 (-)NCBI
GRCm381790,033,644 - 90,455,880 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001346959   ⟹   NP_001333888
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,072 - 90,763,308 (-)NCBI
GRCm381790,033,644 - 90,455,880 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001346960   ⟹   NP_001333889
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,072 - 90,763,308 (-)NCBI
GRCm381790,033,644 - 90,455,880 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001346961   ⟹   NP_001333890
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,072 - 90,763,308 (-)NCBI
GRCm381790,033,644 - 90,455,880 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001346962   ⟹   NP_001333891
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,072 - 90,395,796 (-)NCBI
GRCm381790,033,644 - 90,088,368 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001347419   ⟹   NP_001334348
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,072 - 90,395,796 (-)NCBI
GRCm381790,033,644 - 90,088,368 (-)NCBI
Sequence:
RefSeq Acc Id: NM_020252   ⟹   NP_064648
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,072 - 91,400,230 (-)NCBI
GRCm381790,033,644 - 91,092,802 (-)NCBI
MGSCv371790,432,984 - 91,492,142 (-)RGD
Celera1794,417,402 - 95,489,954 (-)RGD
cM Map17 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_177284   ⟹   NP_796258
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,072 - 91,400,230 (-)NCBI
GRCm381790,033,644 - 91,092,802 (-)NCBI
MGSCv371790,432,984 - 91,492,142 (-)RGD
Celera1794,417,402 - 95,489,954 (-)RGD
cM Map17 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006523811   ⟹   XP_006523874
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
GRCm381790,033,952 - 91,093,159 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006523812   ⟹   XP_006523875
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
GRCm381790,033,952 - 91,093,159 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006523815   ⟹   XP_006523878
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
GRCm381790,033,952 - 91,093,159 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006523816   ⟹   XP_006523879
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
GRCm381790,033,952 - 91,093,159 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011246318   ⟹   XP_011244620
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
GRCm381790,033,952 - 91,093,159 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017317294   ⟹   XP_017172783
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
GRCm381790,033,952 - 91,093,159 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017317296   ⟹   XP_017172785
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
GRCm381790,033,952 - 91,093,159 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017317297   ⟹   XP_017172786
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
GRCm381790,033,952 - 91,093,159 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017317300   ⟹   XP_017172789
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
GRCm381790,033,952 - 91,093,159 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017317301   ⟹   XP_017172790
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
GRCm381790,033,952 - 91,093,159 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017317303   ⟹   XP_017172792
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
GRCm381790,033,952 - 91,093,159 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017317304   ⟹   XP_017172793
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
GRCm381790,033,952 - 91,093,159 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017317306   ⟹   XP_017172795
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
GRCm381790,033,952 - 91,093,159 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017317307   ⟹   XP_017172796
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
GRCm381790,033,952 - 91,093,159 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017317308   ⟹   XP_017172797
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
GRCm381790,033,952 - 91,093,159 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017317309   ⟹   XP_017172798
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
GRCm381790,033,952 - 91,093,159 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017317310   ⟹   XP_017172799
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
GRCm381790,033,952 - 91,093,159 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030249558   ⟹   XP_030105418
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
GRCm381790,033,952 - 91,093,159 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030249559   ⟹   XP_030105419
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
GRCm381790,033,952 - 91,093,159 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030249561   ⟹   XP_030105421
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
GRCm381790,033,952 - 91,093,159 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030249562   ⟹   XP_030105422
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
GRCm381790,033,952 - 91,093,159 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036160367   ⟹   XP_036016260
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
RefSeq Acc Id: XM_036160368   ⟹   XP_036016261
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
RefSeq Acc Id: XM_036160369   ⟹   XP_036016262
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
RefSeq Acc Id: XM_036160370   ⟹   XP_036016263
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
RefSeq Acc Id: XM_036160371   ⟹   XP_036016264
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
RefSeq Acc Id: XM_036160372   ⟹   XP_036016265
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
RefSeq Acc Id: XM_036160373   ⟹   XP_036016266
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
RefSeq Acc Id: XM_036160374   ⟹   XP_036016267
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
RefSeq Acc Id: XM_036160375   ⟹   XP_036016268
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
RefSeq Acc Id: XM_036160376   ⟹   XP_036016269
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
RefSeq Acc Id: XM_036160377   ⟹   XP_036016270
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
RefSeq Acc Id: XM_036160378   ⟹   XP_036016271
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
RefSeq Acc Id: XM_036160379   ⟹   XP_036016272
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
RefSeq Acc Id: XM_036160380   ⟹   XP_036016273
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
RefSeq Acc Id: XM_036160381   ⟹   XP_036016274
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
RefSeq Acc Id: XM_036160382   ⟹   XP_036016275
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
RefSeq Acc Id: XM_036160383   ⟹   XP_036016276
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
RefSeq Acc Id: XM_036160384   ⟹   XP_036016277
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
RefSeq Acc Id: XM_036160385   ⟹   XP_036016278
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
RefSeq Acc Id: XM_036160386   ⟹   XP_036016279
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
RefSeq Acc Id: XM_036160387   ⟹   XP_036016280
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
RefSeq Acc Id: XM_036160388   ⟹   XP_036016281
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
RefSeq Acc Id: XM_036160389   ⟹   XP_036016282
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
RefSeq Acc Id: XM_036160390   ⟹   XP_036016283
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
RefSeq Acc Id: XM_036160391   ⟹   XP_036016284
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
RefSeq Acc Id: XM_036160392   ⟹   XP_036016285
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
RefSeq Acc Id: XM_036160393   ⟹   XP_036016286
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391790,341,380 - 91,400,587 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001333886 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333887 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333888 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333889 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333890 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333891 (Get FASTA)   NCBI Sequence Viewer  
  NP_001334348 (Get FASTA)   NCBI Sequence Viewer  
  NP_064648 (Get FASTA)   NCBI Sequence Viewer  
  NP_796258 (Get FASTA)   NCBI Sequence Viewer  
  XP_006523874 (Get FASTA)   NCBI Sequence Viewer  
  XP_006523875 (Get FASTA)   NCBI Sequence Viewer  
  XP_006523878 (Get FASTA)   NCBI Sequence Viewer  
  XP_006523879 (Get FASTA)   NCBI Sequence Viewer  
  XP_011244620 (Get FASTA)   NCBI Sequence Viewer  
  XP_017172783 (Get FASTA)   NCBI Sequence Viewer  
  XP_017172785 (Get FASTA)   NCBI Sequence Viewer  
  XP_017172786 (Get FASTA)   NCBI Sequence Viewer  
  XP_017172789 (Get FASTA)   NCBI Sequence Viewer  
  XP_017172790 (Get FASTA)   NCBI Sequence Viewer  
  XP_017172792 (Get FASTA)   NCBI Sequence Viewer  
  XP_017172793 (Get FASTA)   NCBI Sequence Viewer  
  XP_017172795 (Get FASTA)   NCBI Sequence Viewer  
  XP_017172796 (Get FASTA)   NCBI Sequence Viewer  
  XP_017172797 (Get FASTA)   NCBI Sequence Viewer  
  XP_017172798 (Get FASTA)   NCBI Sequence Viewer  
  XP_017172799 (Get FASTA)   NCBI Sequence Viewer  
  XP_030105418 (Get FASTA)   NCBI Sequence Viewer  
  XP_030105419 (Get FASTA)   NCBI Sequence Viewer  
  XP_030105421 (Get FASTA)   NCBI Sequence Viewer  
  XP_030105422 (Get FASTA)   NCBI Sequence Viewer  
  XP_036016260 (Get FASTA)   NCBI Sequence Viewer  
  XP_036016261 (Get FASTA)   NCBI Sequence Viewer  
  XP_036016262 (Get FASTA)   NCBI Sequence Viewer  
  XP_036016263 (Get FASTA)   NCBI Sequence Viewer  
  XP_036016264 (Get FASTA)   NCBI Sequence Viewer  
  XP_036016265 (Get FASTA)   NCBI Sequence Viewer  
  XP_036016266 (Get FASTA)   NCBI Sequence Viewer  
  XP_036016267 (Get FASTA)   NCBI Sequence Viewer  
  XP_036016268 (Get FASTA)   NCBI Sequence Viewer  
  XP_036016269 (Get FASTA)   NCBI Sequence Viewer  
  XP_036016270 (Get FASTA)   NCBI Sequence Viewer  
  XP_036016271 (Get FASTA)   NCBI Sequence Viewer  
  XP_036016272 (Get FASTA)   NCBI Sequence Viewer  
  XP_036016273 (Get FASTA)   NCBI Sequence Viewer  
  XP_036016274 (Get FASTA)   NCBI Sequence Viewer  
  XP_036016275 (Get FASTA)   NCBI Sequence Viewer  
  XP_036016276 (Get FASTA)   NCBI Sequence Viewer  
  XP_036016277 (Get FASTA)   NCBI Sequence Viewer  
  XP_036016278 (Get FASTA)   NCBI Sequence Viewer  
  XP_036016279 (Get FASTA)   NCBI Sequence Viewer  
  XP_036016280 (Get FASTA)   NCBI Sequence Viewer  
  XP_036016281 (Get FASTA)   NCBI Sequence Viewer  
  XP_036016282 (Get FASTA)   NCBI Sequence Viewer  
  XP_036016283 (Get FASTA)   NCBI Sequence Viewer  
  XP_036016284 (Get FASTA)   NCBI Sequence Viewer  
  XP_036016285 (Get FASTA)   NCBI Sequence Viewer  
  XP_036016286 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAK70469 (Get FASTA)   NCBI Sequence Viewer  
  AAK70470 (Get FASTA)   NCBI Sequence Viewer  
  AAK70471 (Get FASTA)   NCBI Sequence Viewer  
  BAB30815 (Get FASTA)   NCBI Sequence Viewer  
  BAC41433 (Get FASTA)   NCBI Sequence Viewer  
  CAA07257 (Get FASTA)   NCBI Sequence Viewer  
  EDL38657 (Get FASTA)   NCBI Sequence Viewer  
  P0DI97 (Get FASTA)   NCBI Sequence Viewer  
  Q9CS84 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_064648   ⟸   NM_020252
- Peptide Label: isoform 1 precursor
- UniProtKB: Q9CS84 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_796258   ⟸   NM_177284
- Peptide Label: isoform 2 precursor
- UniProtKB: Q9CS84 (UniProtKB/Swiss-Prot),   E0CY11 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006523878   ⟸   XM_006523815
- Peptide Label: isoform X24
- Sequence:
RefSeq Acc Id: XP_006523875   ⟸   XM_006523812
- Peptide Label: isoform X14
- UniProtKB: Q9CS84 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006523874   ⟸   XM_006523811
- Peptide Label: isoform X11
- UniProtKB: Q9CS84 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006523879   ⟸   XM_006523816
- Peptide Label: isoform X26
- UniProtKB: Q9CS84 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011244620   ⟸   XM_011246318
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_017172796   ⟸   XM_017317307
- Peptide Label: isoform X19
- Sequence:
RefSeq Acc Id: XP_017172783   ⟸   XM_017317294
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_017172795   ⟸   XM_017317306
- Peptide Label: isoform X15
- Sequence:
RefSeq Acc Id: XP_017172786   ⟸   XM_017317297
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_017172789   ⟸   XM_017317300
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_017172793   ⟸   XM_017317304
- Peptide Label: isoform X13
- Sequence:
RefSeq Acc Id: XP_017172790   ⟸   XM_017317301
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_017172797   ⟸   XM_017317308
- Peptide Label: isoform X20
- Sequence:
RefSeq Acc Id: XP_017172785   ⟸   XM_017317296
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_017172799   ⟸   XM_017317310
- Peptide Label: isoform X30
- Sequence:
RefSeq Acc Id: XP_017172798   ⟸   XM_017317309
- Peptide Label: isoform X22
- Sequence:
RefSeq Acc Id: XP_017172792   ⟸   XM_017317303
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: NP_001333886   ⟸   NM_001346957
- Peptide Label: isoform 3 precursor
RefSeq Acc Id: NP_001333890   ⟸   NM_001346961
- Peptide Label: isoform 7
RefSeq Acc Id: NP_001333889   ⟸   NM_001346960
- Peptide Label: isoform 6
- UniProtKB: E0CZA5 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001333887   ⟸   NM_001346958
- Peptide Label: isoform 4 precursor
- UniProtKB: A0A0H2UH29 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001333888   ⟸   NM_001346959
- Peptide Label: isoform 5 precursor
- UniProtKB: P0DI97 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001333891   ⟸   NM_001346962
- Peptide Label: isoform 8
- UniProtKB: Q9CS84 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001334348   ⟸   NM_001347419
- Peptide Label: isoform 9
- UniProtKB: G3UWQ9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030105422   ⟸   XM_030249562
- Peptide Label: isoform X38
RefSeq Acc Id: XP_030105418   ⟸   XM_030249558
- Peptide Label: isoform X10
RefSeq Acc Id: XP_030105421   ⟸   XM_030249561
- Peptide Label: isoform X36
RefSeq Acc Id: XP_030105419   ⟸   XM_030249559
- Peptide Label: isoform X17
RefSeq Acc Id: ENSMUSP00000125561   ⟸   ENSMUST00000159778
RefSeq Acc Id: ENSMUSP00000142815   ⟸   ENSMUST00000197268
RefSeq Acc Id: ENSMUSP00000142650   ⟸   ENSMUST00000197224
RefSeq Acc Id: ENSMUSP00000142621   ⟸   ENSMUST00000197104
RefSeq Acc Id: ENSMUSP00000134402   ⟸   ENSMUST00000172466
RefSeq Acc Id: ENSMUSP00000057294   ⟸   ENSMUST00000054059
RefSeq Acc Id: ENSMUSP00000072458   ⟸   ENSMUST00000072671
RefSeq Acc Id: ENSMUSP00000133491   ⟸   ENSMUST00000174331
RefSeq Acc Id: ENSMUSP00000133724   ⟸   ENSMUST00000174337
RefSeq Acc Id: ENSMUSP00000124561   ⟸   ENSMUST00000160800
RefSeq Acc Id: ENSMUSP00000125407   ⟸   ENSMUST00000160844
RefSeq Acc Id: ENSMUSP00000146701   ⟸   ENSMUST00000173222
RefSeq Acc Id: ENSMUSP00000133389   ⟸   ENSMUST00000173917
RefSeq Acc Id: ENSMUSP00000142891   ⟸   ENSMUST00000196559
RefSeq Acc Id: ENSMUSP00000135241   ⟸   ENSMUST00000176118
RefSeq Acc Id: ENSMUSP00000124116   ⟸   ENSMUST00000161402
RefSeq Acc Id: XP_036016273   ⟸   XM_036160380
- Peptide Label: isoform X24
RefSeq Acc Id: XP_036016267   ⟸   XM_036160374
- Peptide Label: isoform X15
RefSeq Acc Id: XP_036016286   ⟸   XM_036160393
- Peptide Label: isoform X39
RefSeq Acc Id: XP_036016269   ⟸   XM_036160376
- Peptide Label: isoform X18
RefSeq Acc Id: XP_036016282   ⟸   XM_036160389
- Peptide Label: isoform X34
RefSeq Acc Id: XP_036016263   ⟸   XM_036160370
- Peptide Label: isoform X8
RefSeq Acc Id: XP_036016260   ⟸   XM_036160367
- Peptide Label: isoform X3
RefSeq Acc Id: XP_036016276   ⟸   XM_036160383
- Peptide Label: isoform X28
RefSeq Acc Id: XP_036016271   ⟸   XM_036160378
- Peptide Label: isoform X21
RefSeq Acc Id: XP_036016270   ⟸   XM_036160377
- Peptide Label: isoform X19
RefSeq Acc Id: XP_036016285   ⟸   XM_036160392
- Peptide Label: isoform X39
RefSeq Acc Id: XP_036016268   ⟸   XM_036160375
- Peptide Label: isoform X18
RefSeq Acc Id: XP_036016281   ⟸   XM_036160388
- Peptide Label: isoform X34
RefSeq Acc Id: XP_036016278   ⟸   XM_036160385
- Peptide Label: isoform X31
RefSeq Acc Id: XP_036016264   ⟸   XM_036160371
- Peptide Label: isoform X9
RefSeq Acc Id: XP_036016262   ⟸   XM_036160369
- Peptide Label: isoform X8
RefSeq Acc Id: XP_036016283   ⟸   XM_036160390
- Peptide Label: isoform X35
RefSeq Acc Id: XP_036016280   ⟸   XM_036160387
- Peptide Label: isoform X33
RefSeq Acc Id: XP_036016272   ⟸   XM_036160379
- Peptide Label: isoform X23
RefSeq Acc Id: XP_036016266   ⟸   XM_036160373
- Peptide Label: isoform X16
RefSeq Acc Id: XP_036016265   ⟸   XM_036160372
- Peptide Label: isoform X12
RefSeq Acc Id: XP_036016284   ⟸   XM_036160391
- Peptide Label: isoform X37
RefSeq Acc Id: XP_036016277   ⟸   XM_036160384
- Peptide Label: isoform X29
RefSeq Acc Id: XP_036016274   ⟸   XM_036160381
- Peptide Label: isoform X25
RefSeq Acc Id: XP_036016261   ⟸   XM_036160368
- Peptide Label: isoform X6
RefSeq Acc Id: XP_036016279   ⟸   XM_036160386
- Peptide Label: isoform X32
RefSeq Acc Id: XP_036016275   ⟸   XM_036160382
- Peptide Label: isoform X27
Protein Domains
4.1m   EGF-like   LAM_G_DOMAIN   Laminin G-like

Promoters
RGD ID:13676982
Promoter ID:EPDNEW_M22640
Type:multiple initiation site
Name:Nrxn1_2
Description:Mus musculus neurexin I , transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M22641  EPDNEW_M22642  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381790,088,201 - 90,088,261EPDNEW
RGD ID:6847425
Promoter ID:MM_ACW:23930
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:NRXN1.JSEP07,   NRXN1.LSEP07,   NRXN1.NSEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361790,487,446 - 90,487,946 (-)MPROMDB
RGD ID:13676984
Promoter ID:EPDNEW_M22641
Type:initiation region
Name:Nrxn1_1
Description:Mus musculus neurexin I , transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M22640  EPDNEW_M22642  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381791,092,736 - 91,092,796EPDNEW
RGD ID:13676986
Promoter ID:EPDNEW_M22642
Type:initiation region
Name:Nrxn1_3
Description:Mus musculus neurexin I , transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M22640  EPDNEW_M22641  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381791,093,001 - 91,093,061EPDNEW
RGD ID:6828423
Promoter ID:MM_KWN:24436
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:ENSMUST00000072671,   UC008DVZ.1,   UC008DWA.1,   UC008DWB.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361791,104,266 - 91,104,766 (-)MPROMDB
RGD ID:6828424
Promoter ID:MM_KWN:24442
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:UC008DWC.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361791,487,421 - 91,487,921 (-)MPROMDB
RGD ID:6827811
Promoter ID:MM_KWN:24444
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:NM_020252,   NM_177284,   UC008DVY.1,   UC008DWE.1,   UC008DWF.1,   UC008DWH.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361791,491,891 - 91,492,391 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1096391 AgrOrtholog
Ensembl Genes ENSMUSG00000024109 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000057294 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000072458 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000124116 UniProtKB/Swiss-Prot
  ENSMUSP00000124561 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000125407 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000125561 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000133389 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000133491 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000133724 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000134402 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000135241 UniProtKB/TrEMBL
  ENSMUSP00000142621 UniProtKB/TrEMBL
  ENSMUSP00000142650 UniProtKB/TrEMBL
  ENSMUSP00000142815 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000142891 UniProtKB/TrEMBL
  ENSMUSP00000146701 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000054059 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000072671 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000159778 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000160800 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000160844 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000161402 UniProtKB/Swiss-Prot
  ENSMUST00000172466 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000173222 UniProtKB/TrEMBL
  ENSMUST00000173917 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000174331 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000174337 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000176118 UniProtKB/TrEMBL
  ENSMUST00000196559 UniProtKB/TrEMBL
  ENSMUST00000197104 UniProtKB/TrEMBL
  ENSMUST00000197224 UniProtKB/TrEMBL
  ENSMUST00000197268 ENTREZGENE, UniProtKB/Swiss-Prot
InterPro ConA-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  EGF-like_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  EGF-type_Asp/Asn_hydroxyl_site UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Laminin_G UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Neurexin-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Syndecan/Neurexin_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:18189 UniProtKB/Swiss-Prot
MGD MGI:1096391 ENTREZGENE
NCBI Gene 18189 ENTREZGENE
Pfam EGF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Laminin_G_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Syndecan UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Nrxn1 PhenoGen
PROSITE ASX_HYDROXYL UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  EGF_3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  LAM_G_DOMAIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART 4.1m UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  EGF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  LamG UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF49899 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0G2JE40_MOUSE UniProtKB/TrEMBL
  A0A0G2JE65_MOUSE UniProtKB/TrEMBL
  A0A0G2JES8_MOUSE UniProtKB/TrEMBL
  A0A0H2UH29 ENTREZGENE, UniProtKB/TrEMBL
  A0A140LI71_MOUSE UniProtKB/TrEMBL
  E0CY11 ENTREZGENE, UniProtKB/TrEMBL
  E0CZA5 ENTREZGENE, UniProtKB/TrEMBL
  G3UWQ9 ENTREZGENE, UniProtKB/TrEMBL
  H3BK41_MOUSE UniProtKB/TrEMBL
  NRX1A_MOUSE UniProtKB/Swiss-Prot
  NRX1B_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q9CS84 ENTREZGENE
UniProt Secondary G3UWZ9 UniProtKB/Swiss-Prot
  O88722 UniProtKB/Swiss-Prot
  Q80Y87 UniProtKB/Swiss-Prot
  Q8CHE6 UniProtKB/Swiss-Prot