Ptprs (protein tyrosine phosphatase, receptor type, S) - Rat Genome Database

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Gene: Ptprs (protein tyrosine phosphatase, receptor type, S) Mus musculus
Analyze
Symbol: Ptprs
Name: protein tyrosine phosphatase, receptor type, S
RGD ID: 734358
MGI Page MGI
Description: Enables chondroitin sulfate binding activity; heparin binding activity; and protein tyrosine phosphatase activity. Involved in several processes, including negative regulation of neuron projection development; peptidyl-tyrosine dephosphorylation; and regulation of postsynaptic density assembly. Acts upstream of or within central nervous system development and establishment of endothelial intestinal barrier. Located in plasma membrane. Is active in Schaffer collateral - CA1 synapse and glutamatergic synapse. Is integral component of presynaptic membrane. Is expressed in several structures, including adipose tissue; genitourinary system; gut; nervous system; and sensory organ. Orthologous to human PTPRS (protein tyrosine phosphatase receptor type S).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AL022616; MGC90571; PTP; PTP-; PTP-NU3; PTPNU-3; PTPsigma; Ptpt9; R-PTP-S; R-PTP-sigma; receptor-type tyrosine-protein phosphatase S; Receptor-type tyrosine-protein phosphatase sigma; RPT; RPTPsigma; tissue-specific protein tyrosine phosphatase
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391756,719,426 - 56,783,526 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1756,719,426 - 56,783,483 (-)EnsemblGRCm39 Ensembl
GRCm381756,412,426 - 56,476,561 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1756,412,426 - 56,476,483 (-)EnsemblGRCm38mm10GRCm38
MGSCv371756,551,849 - 56,615,903 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361756,046,141 - 56,110,077 (-)NCBIMGSCv36mm8
Celera1760,758,165 - 60,822,309 (-)NCBICelera
Cytogenetic Map17DNCBI
cM Map1729.32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dimethylhydrazine  (EXP)
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (EXP,ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (EXP)
2,2',5,5'-tetrachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-butoxyethanol  (EXP)
3,4-methylenedioxymethamphetamine  (EXP)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (ISO)
6-propyl-2-thiouracil  (ISO)
acetamide  (ISO)
acrylamide  (ISO)
aflatoxin B1  (ISO)
Aflatoxin B2 alpha  (ISO)
all-trans-retinoic acid  (ISO)
amphetamine  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (EXP)
atrazine  (ISO)
benzo[a]pyrene  (EXP,ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
carbon nanotube  (EXP)
CGP 52608  (ISO)
chlordecone  (EXP)
chloroprene  (ISO)
choline  (EXP)
clobetasol  (EXP)
copper atom  (ISO)
copper(0)  (ISO)
dibutyl phthalate  (EXP,ISO)
dicrotophos  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
endosulfan  (ISO)
ethanol  (EXP)
folic acid  (EXP)
fulvestrant  (ISO)
glutathione  (ISO)
glyphosate  (ISO)
indole-3-methanol  (ISO)
L-methionine  (EXP)
methamphetamine  (EXP)
methapyrilene  (ISO)
miconazole  (EXP)
N-methyl-N'-nitro-N-nitrosoguanidine  (ISO)
N-nitrosodiethylamine  (ISO)
ozone  (EXP)
paraquat  (ISO)
PCB138  (EXP)
phenylmercury acetate  (ISO)
piperonyl butoxide  (ISO)
pirinixic acid  (EXP)
potassium dichromate  (ISO)
propanal  (ISO)
rotenone  (ISO)
SB 431542  (ISO)
sodium arsenite  (ISO)
sodium dichromate  (ISO)
sodium fluoride  (EXP)
tamoxifen  (EXP)
thioacetamide  (ISO)
titanium dioxide  (EXP)
trichloroethene  (EXP)
trichostatin A  (ISO)
valproic acid  (ISO)
vinclozolin  (ISO)
vorinostat  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal axon extension  (IAGP)
abnormal brown adipose tissue morphology  (IAGP)
abnormal motor neuron morphology  (IAGP)
abnormal neuron physiology  (IAGP)
abnormal palatal shelf fusion at midline  (IAGP)
abnormal phrenic nerve morphology  (IAGP)
abnormal pulmonary alveolus morphology  (IAGP)
abnormal retina neuronal layer morphology  (IAGP)
abnormal ureter development  (IAGP)
abnormal ureter morphology  (IAGP)
absent estrous cycle  (IAGP)
absent estrus  (IAGP)
axial skeleton hypoplasia  (IAGP)
cachexia  (IAGP)
carpoptosis  (IAGP)
centrally nucleated skeletal muscle fibers  (IAGP)
cleft secondary palate  (IAGP)
decreased body weight  (IAGP)
decreased brain size  (IAGP)
decreased circulating insulin-like growth factor I level  (IAGP)
decreased litter size  (IAGP)
decreased motor neuron number  (IAGP)
dilated ureter  (IAGP)
disorganized retina inner nuclear layer  (IAGP)
double ureter  (IAGP)
duplex kidney  (IAGP)
enhanced central nervous system regeneration  (IAGP)
exencephaly  (IAGP)
eyelids open at birth  (IAGP)
hydroureter  (IAGP)
hypaxial muscle hypoplasia  (IAGP)
impaired olfaction  (IAGP)
increased subcutaneous adipose tissue amount  (IAGP)
kyphosis  (IAGP)
micrognathia  (IAGP)
neonatal lethality, complete penetrance  (IAGP)
neonatal lethality, incomplete penetrance  (IAGP)
persistent hyaloid artery  (IAGP)
postnatal growth retardation  (IAGP)
postnatal lethality, incomplete penetrance  (IAGP)
premature death  (IAGP)
small olfactory bulb  (IAGP)
small pituitary gland  (IAGP)
thin dermal layer  (IAGP)
thin diaphragm muscle  (IAGP)
translucent skin  (IAGP)
underdeveloped hair follicles  (IAGP)
ureterocele  (IAGP)
References

References - curated
# Reference Title Reference Citation
1. MGDs mouse GO annotations MGD data from the GO Consortium
2. Mouse MP Annotation Import Pipeline RGD automated import pipeline
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:1454056   PMID:7529177   PMID:7671812   PMID:7832766   PMID:7963522   PMID:8227050   PMID:8479755   PMID:8889548   PMID:8954782   PMID:9784606   PMID:10080191   PMID:10080192  
PMID:10349636   PMID:10777529   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11773446   PMID:12097500   PMID:12237861   PMID:12376545   PMID:12466851   PMID:12471016  
PMID:12477932   PMID:12520002   PMID:12932447   PMID:14610273   PMID:14613977   PMID:14967925   PMID:15226823   PMID:15489334   PMID:15522239   PMID:15797710   PMID:15842738   PMID:16141072  
PMID:16141073   PMID:16373427   PMID:16602821   PMID:16738228   PMID:16998539   PMID:17060446   PMID:17614280   PMID:18308476   PMID:18799693   PMID:19273906   PMID:19727691   PMID:19780196  
PMID:19833921   PMID:20179269   PMID:20550964   PMID:21262467   PMID:21267068   PMID:21454754   PMID:21873635   PMID:22027896   PMID:22140262   PMID:22406547   PMID:22519304   PMID:23193182  
PMID:23616527   PMID:23863482   PMID:24194600   PMID:24385580   PMID:24530640   PMID:25385546   PMID:25415437   PMID:25470046   PMID:25639594   PMID:25826454   PMID:25995222   PMID:26231120  
PMID:26896769   PMID:28378742   PMID:28637841   PMID:28671696   PMID:29031500   PMID:29073098   PMID:29880643   PMID:30297691   PMID:31413255   PMID:31875546   PMID:31985401   PMID:31995730  
PMID:32142410   PMID:32325033   PMID:32516721   PMID:32554809   PMID:33037075   PMID:33515635   PMID:33656439  


Genomics

Comparative Map Data
Ptprs
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391756,719,426 - 56,783,526 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1756,719,426 - 56,783,483 (-)EnsemblGRCm39 Ensembl
GRCm381756,412,426 - 56,476,561 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1756,412,426 - 56,476,483 (-)EnsemblGRCm38mm10GRCm38
MGSCv371756,551,849 - 56,615,903 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361756,046,141 - 56,110,077 (-)NCBIMGSCv36mm8
Celera1760,758,165 - 60,822,309 (-)NCBICelera
Cytogenetic Map17DNCBI
cM Map1729.32NCBI
PTPRS
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38195,205,508 - 5,340,812 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl195,158,495 - 5,340,812 (-)EnsemblGRCh38hg38GRCh38
GRCh37195,205,519 - 5,340,823 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36195,156,519 - 5,291,814 (-)NCBINCBI36Build 36hg18NCBI36
Build 34195,157,380 - 5,237,399NCBI
Celera195,143,031 - 5,278,326 (-)NCBICelera
Cytogenetic Map19p13.3NCBI
HuRef194,967,302 - 5,101,977 (-)NCBIHuRef
CHM1_1195,205,046 - 5,340,693 (-)NCBICHM1_1
T2T-CHM13v2.0195,192,102 - 5,327,425 (-)NCBIT2T-CHM13v2.0
Ptprs
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.291,245,408 - 1,307,015 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl91,245,410 - 1,306,947 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx91,691,696 - 1,752,582 (-)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.097,039,698 - 7,100,595 (-)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.095,996,746 - 6,057,635 (-)NCBIRnor_WKY
Rnor_6.0910,585,360 - 10,646,205 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl910,603,813 - 10,645,939 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.099,578,004 - 9,637,940 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera97,203,284 - 7,264,120 (+)NCBICelera
Cytogenetic Map9q12NCBI
Ptprs
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554953,943,170 - 3,990,927 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554953,943,075 - 3,991,361 (+)NCBIChiLan1.0ChiLan1.0
PTPRS
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1195,167,338 - 5,254,343 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl195,168,599 - 5,247,778 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0194,227,038 - 4,361,958 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PTPRS
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12054,575,853 - 54,672,141 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2054,575,895 - 54,672,068 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2054,301,762 - 54,397,754 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02055,231,459 - 55,327,738 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2055,231,447 - 55,326,993 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12054,293,104 - 54,389,219 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02054,773,757 - 54,869,877 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02054,971,421 - 55,067,624 (+)NCBIUU_Cfam_GSD_1.0
Ptprs
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118214,761,700 - 214,813,370 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049365883,021,418 - 3,073,080 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PTPRS
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl273,574,854 - 73,680,686 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1273,607,815 - 73,680,685 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2274,545,303 - 74,550,135 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PTPRS
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.164,880,942 - 5,019,654 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl64,882,223 - 4,964,919 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660813,106,747 - 3,243,187 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ptprs
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248284,716,249 - 4,764,614 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248284,688,555 - 4,764,805 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Position Markers
D28530  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381756,412,512 - 56,412,646UniSTSGRCm38
MGSCv371756,551,935 - 56,552,069UniSTSGRCm37
Celera1760,758,251 - 60,758,385UniSTS
Cytogenetic Map17DUniSTS
cM Map1733.8UniSTS
Whitehead/MRC_RH17709.69UniSTS
RH125313  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381756,412,806 - 56,412,981UniSTSGRCm38
MGSCv371756,552,229 - 56,552,404UniSTSGRCm37
Celera1760,758,545 - 60,758,720UniSTS
Cytogenetic Map17DUniSTS
cM Map1733.8UniSTS
UniSTS:237673  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381756,431,180 - 56,431,517UniSTSGRCm38
MGSCv371756,570,603 - 56,570,940UniSTSGRCm37
Celera1760,776,999 - 60,777,336UniSTS
Cytogenetic Map17DUniSTS
cM Map1733.8UniSTS
BMS1116  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381756,445,749 - 56,445,911UniSTSGRCm38
MGSCv371756,585,172 - 56,585,334UniSTSGRCm37
Celera1760,791,571 - 60,791,733UniSTS
Cytogenetic Map17DUniSTS
cM Map1733.8UniSTS
Ptprs  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map17DUniSTS
cM Map1729.32UniSTS


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4141272Tfv1_mtotal food volume 1 (mouse)Not determined485475265637357Mouse
1301338Lmr1_mleishmaniasis resistance 1 (mouse)Not determined171008134086996400Mouse
4142150Stheal11_msoft tissue heal 11 (mouse)Not determined171228621183361768Mouse
1301454Eae5_msusceptibility to experimental allergic encephalomyelitis 5 (mouse)Not determined172461275058612864Mouse
10412204Bbaa29_mB.burgdorferi-associated arthritis 29 (mouse)Not determined172605118560051352Mouse
1302005Loco2_mlocomotor activity 2 (mouse)Not determined172688497260885114Mouse
15039348Nmrs37_mNAFLD-associated magnetic resonance shift 37 (mouse)172781520961815209Mouse
1300703Uvbi2_mUVB induced immunosuppression 2 (mouse)Not determined172862240662622654Mouse
1300589Myaa2_mmodifier of Yaa 2 (mouse)Not determined173013255564132666Mouse
4140955Plgr1_mplague resistance locus 1 (mouse)Not determined3103350065033630Mouse
1300885Mbis4_mMycobacterium bovis-induced systemic lupus erythematosus 4 (mouse)Not determined173517581770165926Mouse
10755514Amzn2_manatomical modifier of Zfp423 2 (mouse)173596629469966424Mouse
12904951Smmq2_msoleus muscle mass QTL 2 (mouse)173678974370789743Mouse
1300592Pcyts5_mplasmacytoma susceptibility 5 (mouse)Not determined173871288772712970Mouse
10755525Lymph2_mlymphocyte differential 2 (mouse)173880562672805626Mouse
10755534Lymph4_mlymphocyte differential 4 (mouse)173880562672805626Mouse
4141319Hmtb8_mhemostasis and thrombosis rebleeding time 8 (mouse)Not determined4053444774534623Mouse
15039324Nmrs48_mNAFLD-associated magnetic resonance shift 48 (mouse)174093918774939187Mouse
26884390Skwq9_mskull length QTL 9, 10 week (mouse)174371089167806995Mouse
26884428Cvht3_mcranial vault height 3, 5 week (mouse)174651092682407429Mouse
14700692Cihvtq1_mcoxsackieviral infection heart viral titre QTL 1 (mouse)175000702870006995Mouse
1357754Ahl3_mage related hearing loss 3 (mouse)Not determined175020395784204103Mouse
4142243Lfnq5_mlung function QTL 5 (mouse)Not determined5173897957534623Mouse
4141879Chlq9_mcirculating hormone level QTL 9 (mouse)Not determined175175842585758612Mouse
1357532Bmch7_mbone mechanical trait 7 (mouse)Not determined175175842585758612Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:764
Count of miRNA genes:371
Interacting mature miRNAs:406
Transcripts:ENSMUST00000067538, ENSMUST00000086828, ENSMUST00000143018
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001252453 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001252455 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001252456 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_011218 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006523874 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006523875 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006523876 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006523877 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006523878 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006523879 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006523880 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006523881 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006523883 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006523884 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006523886 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017317349 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017317350 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030249595 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030249596 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160416 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160417 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160418 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160419 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160420 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003952097 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_385302 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC073761 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI845699 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK032604 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK038176 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK144123 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK159320 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK163915 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK164645 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK169714 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC052462 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC054077 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC083188 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466537 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ177868 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT009637 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  D28530 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  D28531 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  S59186 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X82288 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  Z23050 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000067538   ⟹   ENSMUSP00000064048
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1756,719,433 - 56,783,483 (-)Ensembl
GRCm38.p6 Ensembl1756,412,433 - 56,476,483 (-)Ensembl
RefSeq Acc Id: ENSMUST00000086828   ⟹   ENSMUSP00000084038
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1756,719,431 - 56,769,216 (-)Ensembl
GRCm38.p6 Ensembl1756,412,431 - 56,462,216 (-)Ensembl
RefSeq Acc Id: ENSMUST00000143018
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1756,729,237 - 56,783,369 (-)Ensembl
GRCm38.p6 Ensembl1756,422,237 - 56,476,369 (-)Ensembl
RefSeq Acc Id: ENSMUST00000223642   ⟹   ENSMUSP00000153533
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1756,733,494 - 56,741,982 (-)Ensembl
GRCm38.p6 Ensembl1756,426,494 - 56,434,982 (-)Ensembl
RefSeq Acc Id: ENSMUST00000223671
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1756,740,935 - 56,741,955 (-)Ensembl
GRCm38.p6 Ensembl1756,433,935 - 56,434,955 (-)Ensembl
RefSeq Acc Id: ENSMUST00000223685
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1756,720,299 - 56,721,430 (-)Ensembl
GRCm38.p6 Ensembl1756,413,299 - 56,414,430 (-)Ensembl
RefSeq Acc Id: ENSMUST00000223691
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1756,740,999 - 56,741,685 (-)Ensembl
GRCm38.p6 Ensembl1756,433,999 - 56,434,685 (-)Ensembl
RefSeq Acc Id: ENSMUST00000223706
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1756,730,809 - 56,732,133 (-)Ensembl
GRCm38.p6 Ensembl1756,423,809 - 56,425,133 (-)Ensembl
RefSeq Acc Id: ENSMUST00000223742   ⟹   ENSMUSP00000153335
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1756,761,966 - 56,781,627 (-)Ensembl
GRCm38.p6 Ensembl1756,454,966 - 56,474,627 (-)Ensembl
RefSeq Acc Id: ENSMUST00000223783
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1756,731,182 - 56,732,461 (-)Ensembl
GRCm38.p6 Ensembl1756,424,182 - 56,425,461 (-)Ensembl
RefSeq Acc Id: ENSMUST00000223859   ⟹   ENSMUSP00000153134
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1756,719,426 - 56,783,439 (-)Ensembl
GRCm38.p6 Ensembl1756,412,426 - 56,476,439 (-)Ensembl
RefSeq Acc Id: ENSMUST00000224006
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1756,754,217 - 56,754,626 (-)Ensembl
GRCm38.p6 Ensembl1756,447,217 - 56,447,626 (-)Ensembl
RefSeq Acc Id: ENSMUST00000224193
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1756,764,615 - 56,769,161 (-)Ensembl
GRCm38.p6 Ensembl1756,457,615 - 56,462,161 (-)Ensembl
RefSeq Acc Id: ENSMUST00000224522
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1756,721,680 - 56,722,033 (-)Ensembl
GRCm38.p6 Ensembl1756,414,680 - 56,415,033 (-)Ensembl
RefSeq Acc Id: ENSMUST00000224571
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1756,752,848 - 56,783,389 (-)Ensembl
GRCm38.p6 Ensembl1756,445,848 - 56,476,389 (-)Ensembl
RefSeq Acc Id: ENSMUST00000224777   ⟹   ENSMUSP00000153612
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1756,730,394 - 56,734,994 (-)Ensembl
GRCm38.p6 Ensembl1756,423,394 - 56,427,994 (-)Ensembl
RefSeq Acc Id: ENSMUST00000225104
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1756,732,712 - 56,736,282 (-)Ensembl
GRCm38.p6 Ensembl1756,425,712 - 56,429,282 (-)Ensembl
RefSeq Acc Id: ENSMUST00000225379
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1756,726,414 - 56,729,757 (-)Ensembl
GRCm38.p6 Ensembl1756,419,414 - 56,422,757 (-)Ensembl
RefSeq Acc Id: ENSMUST00000225381
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1756,752,847 - 56,783,444 (-)Ensembl
GRCm38.p6 Ensembl1756,445,847 - 56,476,444 (-)Ensembl
RefSeq Acc Id: ENSMUST00000225456   ⟹   ENSMUSP00000153398
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1756,732,502 - 56,742,009 (-)Ensembl
GRCm38.p6 Ensembl1756,425,502 - 56,435,009 (-)Ensembl
RefSeq Acc Id: ENSMUST00000225785
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1756,734,989 - 56,742,985 (-)Ensembl
GRCm38.p6 Ensembl1756,427,989 - 56,435,985 (-)Ensembl
RefSeq Acc Id: NM_001252453   ⟹   NP_001239382
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391756,719,426 - 56,783,480 (-)NCBI
GRCm381756,412,426 - 56,476,480 (-)ENTREZGENE
Celera1760,758,165 - 60,822,309 (-)ENTREZGENE
cM Map17 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001252455   ⟹   NP_001239384
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391756,719,426 - 56,783,480 (-)NCBI
GRCm381756,412,426 - 56,476,480 (-)ENTREZGENE
Celera1760,758,165 - 60,822,309 (-)ENTREZGENE
cM Map17 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001252456   ⟹   NP_001239385
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391756,719,426 - 56,769,221 (-)NCBI
GRCm381756,412,426 - 56,462,221 (-)NCBI
Celera1760,758,165 - 60,822,309 (-)ENTREZGENE
cM Map17 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_011218   ⟹   NP_035348
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391756,719,426 - 56,783,480 (-)NCBI
GRCm381756,412,426 - 56,476,480 (-)ENTREZGENE
MGSCv371756,551,849 - 56,615,903 (-)RGD
Celera1760,758,165 - 60,822,309 (-)RGD
cM Map17 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006523874   ⟹   XP_006523937
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391756,719,427 - 56,783,474 (-)NCBI
GRCm381756,412,427 - 56,476,474 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006523875   ⟹   XP_006523938
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391756,719,427 - 56,773,956 (-)NCBI
GRCm381756,412,427 - 56,464,717 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006523876   ⟹   XP_006523939
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391756,719,427 - 56,783,526 (-)NCBI
GRCm381756,412,427 - 56,476,561 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006523877   ⟹   XP_006523940
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391756,719,427 - 56,783,474 (-)NCBI
GRCm381756,412,427 - 56,476,474 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006523878   ⟹   XP_006523941
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391756,719,427 - 56,783,474 (-)NCBI
GRCm381756,412,427 - 56,476,474 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006523879   ⟹   XP_006523942
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391756,719,427 - 56,783,474 (-)NCBI
GRCm381756,412,427 - 56,476,474 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006523880   ⟹   XP_006523943
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391756,719,427 - 56,783,526 (-)NCBI
GRCm381756,412,427 - 56,476,561 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006523881   ⟹   XP_006523944
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391756,719,427 - 56,783,474 (-)NCBI
GRCm381756,412,427 - 56,476,474 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006523883   ⟹   XP_006523946
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391756,719,427 - 56,752,842 (-)NCBI
GRCm381756,412,427 - 56,438,055 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006523884   ⟹   XP_006523947
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391756,719,427 - 56,742,807 (-)NCBI
GRCm381756,412,427 - 56,435,807 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006523886   ⟹   XP_006523949
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391756,719,427 - 56,752,842 (-)NCBI
GRCm381756,412,427 - 56,438,055 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017317349   ⟹   XP_017172838
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391756,719,427 - 56,752,842 (-)NCBI
GRCm381756,412,427 - 56,445,826 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017317350   ⟹   XP_017172839
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391756,719,427 - 56,752,828 (-)NCBI
GRCm381756,412,427 - 56,445,826 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030249595   ⟹   XP_030105455
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391756,719,427 - 56,773,956 (-)NCBI
GRCm381756,412,427 - 56,464,717 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030249596   ⟹   XP_030105456
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391756,719,427 - 56,762,019 (-)NCBI
GRCm381756,412,427 - 56,454,998 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036160416   ⟹   XP_036016309
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391756,719,427 - 56,768,891 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036160417   ⟹   XP_036016310
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391756,719,427 - 56,768,870 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036160418   ⟹   XP_036016311
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391756,719,427 - 56,783,526 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036160419   ⟹   XP_036016312
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391756,719,427 - 56,752,842 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036160420   ⟹   XP_036016313
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391756,719,427 - 56,752,910 (-)NCBI
Sequence:
RefSeq Acc Id: XR_003952097
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391756,731,076 - 56,783,526 (-)NCBI
GRCm381756,424,076 - 56,476,561 (-)NCBI
Sequence:
RefSeq Acc Id: XR_385302
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391756,729,129 - 56,783,474 (-)NCBI
GRCm381756,422,129 - 56,476,474 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001239382 (Get FASTA)   NCBI Sequence Viewer  
  NP_001239384 (Get FASTA)   NCBI Sequence Viewer  
  NP_001239385 (Get FASTA)   NCBI Sequence Viewer  
  NP_035348 (Get FASTA)   NCBI Sequence Viewer  
  XP_006523937 (Get FASTA)   NCBI Sequence Viewer  
  XP_006523938 (Get FASTA)   NCBI Sequence Viewer  
  XP_006523939 (Get FASTA)   NCBI Sequence Viewer  
  XP_006523940 (Get FASTA)   NCBI Sequence Viewer  
  XP_006523941 (Get FASTA)   NCBI Sequence Viewer  
  XP_006523942 (Get FASTA)   NCBI Sequence Viewer  
  XP_006523943 (Get FASTA)   NCBI Sequence Viewer  
  XP_006523944 (Get FASTA)   NCBI Sequence Viewer  
  XP_006523946 (Get FASTA)   NCBI Sequence Viewer  
  XP_006523947 (Get FASTA)   NCBI Sequence Viewer  
  XP_006523949 (Get FASTA)   NCBI Sequence Viewer  
  XP_017172838 (Get FASTA)   NCBI Sequence Viewer  
  XP_017172839 (Get FASTA)   NCBI Sequence Viewer  
  XP_030105455 (Get FASTA)   NCBI Sequence Viewer  
  XP_030105456 (Get FASTA)   NCBI Sequence Viewer  
  XP_036016309 (Get FASTA)   NCBI Sequence Viewer  
  XP_036016310 (Get FASTA)   NCBI Sequence Viewer  
  XP_036016311 (Get FASTA)   NCBI Sequence Viewer  
  XP_036016312 (Get FASTA)   NCBI Sequence Viewer  
  XP_036016313 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAB26342 (Get FASTA)   NCBI Sequence Viewer  
  AAH52462 (Get FASTA)   NCBI Sequence Viewer  
  AAH83188 (Get FASTA)   NCBI Sequence Viewer  
  B0V2N1 (Get FASTA)   NCBI Sequence Viewer  
  BAA05886 (Get FASTA)   NCBI Sequence Viewer  
  BAA05887 (Get FASTA)   NCBI Sequence Viewer  
  BAE25714 (Get FASTA)   NCBI Sequence Viewer  
  BAE34987 (Get FASTA)   NCBI Sequence Viewer  
  BAE37533 (Get FASTA)   NCBI Sequence Viewer  
  BAE37859 (Get FASTA)   NCBI Sequence Viewer  
  BAE41325 (Get FASTA)   NCBI Sequence Viewer  
  CAA57732 (Get FASTA)   NCBI Sequence Viewer  
  CAA80585 (Get FASTA)   NCBI Sequence Viewer  
  EDL38167 (Get FASTA)   NCBI Sequence Viewer  
  EDL38168 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_035348   ⟸   NM_011218
- Peptide Label: isoform 1 precursor
- UniProtKB: Q7TT17 (UniProtKB/Swiss-Prot),   B0V2N1 (UniProtKB/Swiss-Prot),   Q3TQ52 (UniProtKB/TrEMBL),   A0A6P5NUQ0 (UniProtKB/TrEMBL),   A0A8C6H083 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001239384   ⟸   NM_001252455
- Peptide Label: isoform 3 precursor
- UniProtKB: B0V2N1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001239382   ⟸   NM_001252453
- Peptide Label: isoform 2 precursor
- UniProtKB: B0V2N1 (UniProtKB/Swiss-Prot),   A0A6P5NXB7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001239385   ⟸   NM_001252456
- Peptide Label: isoform 2 precursor
- UniProtKB: B0V2N1 (UniProtKB/Swiss-Prot),   A0A6P5NXB7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006523943   ⟸   XM_006523880
- Peptide Label: isoform X7
- UniProtKB: A0A6P7QEC0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006523939   ⟸   XM_006523876
- Peptide Label: isoform X2
- UniProtKB: A0A6P7QBJ1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006523944   ⟸   XM_006523881
- Peptide Label: isoform X9
- UniProtKB: A0A6P7QBK3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006523942   ⟸   XM_006523879
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_006523941   ⟸   XM_006523878
- Peptide Label: isoform X4
- UniProtKB: A0A6P7QQK9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006523940   ⟸   XM_006523877
- Peptide Label: isoform X3
- UniProtKB: A0A6P7QKD6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006523937   ⟸   XM_006523874
- Peptide Label: isoform X1
- UniProtKB: A0A6P7QE93 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006523938   ⟸   XM_006523875
- Peptide Label: isoform X1
- UniProtKB: A0A6P7QE93 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006523947   ⟸   XM_006523884
- Peptide Label: isoform X12
- Sequence:
RefSeq Acc Id: XP_006523946   ⟸   XM_006523883
- Peptide Label: isoform X12
- Sequence:
RefSeq Acc Id: XP_006523949   ⟸   XM_006523886
- Peptide Label: isoform X13
- Sequence:
RefSeq Acc Id: XP_017172839   ⟸   XM_017317350
- Peptide Label: isoform X11
- Sequence:
RefSeq Acc Id: XP_017172838   ⟸   XM_017317349
- Peptide Label: isoform X8
- Sequence:
RefSeq Acc Id: XP_030105455   ⟸   XM_030249595
- Peptide Label: isoform X2
- UniProtKB: A0A6P7QBJ1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030105456   ⟸   XM_030249596
- Peptide Label: isoform X10
RefSeq Acc Id: ENSMUSP00000153335   ⟸   ENSMUST00000223742
RefSeq Acc Id: ENSMUSP00000153533   ⟸   ENSMUST00000223642
RefSeq Acc Id: ENSMUSP00000153134   ⟸   ENSMUST00000223859
RefSeq Acc Id: ENSMUSP00000153398   ⟸   ENSMUST00000225456
RefSeq Acc Id: ENSMUSP00000084038   ⟸   ENSMUST00000086828
RefSeq Acc Id: ENSMUSP00000064048   ⟸   ENSMUST00000067538
RefSeq Acc Id: ENSMUSP00000153612   ⟸   ENSMUST00000224777
RefSeq Acc Id: XP_036016311   ⟸   XM_036160418
- Peptide Label: isoform X5
RefSeq Acc Id: XP_036016309   ⟸   XM_036160416
- Peptide Label: isoform X1
- UniProtKB: A0A6P7QE93 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036016310   ⟸   XM_036160417
- Peptide Label: isoform X2
- UniProtKB: A0A6P7QBJ1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036016313   ⟸   XM_036160420
- Peptide Label: isoform X10
RefSeq Acc Id: XP_036016312   ⟸   XM_036160419
- Peptide Label: isoform X10
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-B0V2N1-F1-model_v2 AlphaFold B0V2N1 1-1907 view protein structure

Promoters
RGD ID:13676516
Promoter ID:EPDNEW_M22406
Type:single initiation site
Name:Ptprs_3
Description:Mus musculus protein tyrosine phosphatase, receptor type, S ,transcript variant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M22407  EPDNEW_M22408  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381756,425,419 - 56,425,479EPDNEW
RGD ID:13676514
Promoter ID:EPDNEW_M22407
Type:initiation region
Name:Ptprs_2
Description:Mus musculus protein tyrosine phosphatase, receptor type, S ,transcript variant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M22406  EPDNEW_M22408  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381756,462,180 - 56,462,240EPDNEW
RGD ID:13676518
Promoter ID:EPDNEW_M22408
Type:initiation region
Name:Ptprs_1
Description:Mus musculus protein tyrosine phosphatase, receptor type, S ,transcript variant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M22407  EPDNEW_M22406  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381756,476,428 - 56,476,488EPDNEW
RGD ID:6847440
Promoter ID:MM_ACW:23160
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   Brain,   Lung
Transcripts:PTPRS.NSEP07,   PTPRS.TSEP07-UNSPLICED
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361756,552,956 - 56,554,097 (-)MPROMDB
RGD ID:6847437
Promoter ID:MM_ACW:23161
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   ES_Cell
Transcripts:PTPRS.LSEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361756,562,436 - 56,563,007 (-)MPROMDB
RGD ID:6848695
Promoter ID:MM_TRO:4436
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   ES_Cell,   Kidney,   Lung
Transcripts:MTR001912.17.1633.10,   MTR001912.17.1633.11,   MTR001912.17.1633.9
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361756,564,406 - 56,565,057 (-)MPROMDB
RGD ID:6847441
Promoter ID:MM_ACW:23162
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:PTPRS.MSEP07,   PTPRS.USEP07-UNSPLICED
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361756,567,656 - 56,568,156 (-)MPROMDB
RGD ID:6847436
Promoter ID:MM_ACW:23164
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:PTPRS.ESEP07,   PTPRS.HSEP07,   PTPRS.RSEP07-UNSPLICED,   PTPRS.SSEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361756,573,856 - 56,574,356 (-)MPROMDB
RGD ID:6847438
Promoter ID:MM_ACW:23166
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:PTPRS.OSEP07-UNSPLICED
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361756,586,456 - 56,586,956 (-)MPROMDB
RGD ID:6828537
Promoter ID:MM_KWN:23887
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day1,   3T3L1_Day3,   BoneMarrow_0Hour,   Liver,   Lung,   MEF_B6
Transcripts:ENSMUST00000086828
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361756,601,314 - 56,601,814 (-)MPROMDB
RGD ID:6847434
Promoter ID:MM_ACW:23169
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Lung
Transcripts:PTPRS.ASEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361756,613,661 - 56,614,161 (-)MPROMDB
RGD ID:6828193
Promoter ID:MM_KWN:23889
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Lung
Transcripts:AK145036_GM9258,   ENSMUST00000025037,   ENSMUST00000097302,   ENSMUST00000113012,   OTTMUST00000035454,   UC008DCA.1,   UC008DCB.1,   UC008DCD.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361756,615,561 - 56,616,061 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:97815 AgrOrtholog
Ensembl Genes ENSMUSG00000013236 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000064048 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000084038 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000153134 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000153335.2 UniProtKB/TrEMBL
  ENSMUSP00000153398.2 UniProtKB/TrEMBL
  ENSMUSP00000153533.2 UniProtKB/TrEMBL
  ENSMUSP00000153612.2 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000067538 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000086828 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000223642.2 UniProtKB/TrEMBL
  ENSMUST00000223742.2 UniProtKB/TrEMBL
  ENSMUST00000223859 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000224777.2 UniProtKB/TrEMBL
  ENSMUST00000225456.2 UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.90.190.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro FN3_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FN3_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig_I-set UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig_sub UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig_sub2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Prot-tyrosine_phosphatase-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTPase_domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Tyr_Pase_AS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Tyr_Pase_cat UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TYR_PHOSPHATASE_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:19280 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:97815 ENTREZGENE
NCBI Gene 19280 ENTREZGENE
Pfam fn3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  I-set UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Y_phosphatase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Ptprs PhenoGen
PRINTS PRTYPHPHTASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE FN3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  IG_LIKE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TYR_PHOSPHATASE_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TYR_PHOSPHATASE_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TYR_PHOSPHATASE_PTP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART FN3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  IGc2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTPc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTPc_motif UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SM00409 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF48726 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF49265 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF52799 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A286YDF6_MOUSE UniProtKB/TrEMBL
  A0A286YDQ1_MOUSE UniProtKB/TrEMBL
  A0A286YDS2_MOUSE UniProtKB/TrEMBL
  A0A286YEA4_MOUSE UniProtKB/TrEMBL
  A0A6P5NUQ0 ENTREZGENE
  A0A6P5NXB7 ENTREZGENE
  A0A6P7QBJ1 ENTREZGENE
  A0A6P7QBK3 ENTREZGENE
  A0A6P7QE93 ENTREZGENE
  A0A6P7QEC0 ENTREZGENE
  A0A6P7QKD6 ENTREZGENE
  A0A6P7QQK9 ENTREZGENE
  A0A8C6H083 ENTREZGENE
  B0V2N1 ENTREZGENE, UniProtKB/Swiss-Prot
  Q3TP78_MOUSE UniProtKB/TrEMBL
  Q3TQ52 ENTREZGENE, UniProtKB/TrEMBL
  Q3UNN3_MOUSE UniProtKB/TrEMBL
  Q63847_MOUSE UniProtKB/TrEMBL
  Q64494_MOUSE UniProtKB/TrEMBL
  Q7TT17 ENTREZGENE
UniProt Secondary Q3TEC3 UniProtKB/Swiss-Prot
  Q3TXC9 UniProtKB/Swiss-Prot
  Q4JFC7 UniProtKB/Swiss-Prot
  Q5XJV4 UniProtKB/Swiss-Prot
  Q64503 UniProtKB/Swiss-Prot
  Q64699 UniProtKB/Swiss-Prot
  Q7TT17 UniProtKB/Swiss-Prot