Id4 (inhibitor of DNA binding 4) - Rat Genome Database

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Gene: Id4 (inhibitor of DNA binding 4) Mus musculus
Analyze
Symbol: Id4
Name: inhibitor of DNA binding 4
RGD ID: 1550640
MGI Page MGI
Description: Enables RNA polymerase II-specific DNA-binding transcription factor binding activity. Involved in circadian rhythm. Acts upstream of or within several processes, including gland morphogenesis; negative regulation of cell differentiation; and nervous system development. Located in cytoplasm and nucleus. Is expressed in several structures, including alimentary system; central nervous system; immune system; sensory organ; and urinary system. Used to study osteoporosis. Orthologous to human ID4 (inhibitor of DNA binding 4).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: bHLHb2; bHLHb27; DNA-binding protein inhibitor ID-4; Id; Idb; Idb4; inhibitor of differentiation 4
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391348,414,592 - 48,419,504 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1348,414,704 - 48,419,502 (+)EnsemblGRCm39 Ensembl
GRCm381348,261,116 - 48,266,028 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1348,261,228 - 48,266,026 (+)EnsemblGRCm38mm10GRCm38
MGSCv371348,356,796 - 48,359,405 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361348,273,364 - 48,275,973 (+)NCBIMGSCv36mm8
Celera1349,350,381 - 49,353,061 (+)NCBICelera
Cytogenetic Map13A5NCBI
cM Map1324.71NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (EXP)
1,1-dichloroethene  (EXP)
1,3-dinitrobenzene  (ISO)
1-naphthyl isothiocyanate  (ISO)
17alpha-ethynylestradiol  (EXP,ISO)
17beta-estradiol  (ISO)
17beta-hydroxy-5alpha-androstan-3-one  (ISO)
2,2',5,5'-tetrachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
3,3',4,4',5-pentachlorobiphenyl  (ISO)
3,4-methylenedioxymethamphetamine  (EXP)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (EXP,ISO)
4-hydroxyphenyl retinamide  (EXP)
5-aza-2'-deoxycytidine  (ISO)
acrylamide  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (EXP)
ammonium chloride  (ISO)
amphotericin B  (ISO)
aristolochic acid A  (ISO)
arsenous acid  (ISO)
avobenzone  (ISO)
belinostat  (ISO)
benzene  (ISO)
benzo[a]pyrene  (EXP,ISO)
beta-naphthoflavone  (ISO)
bis(2-ethylhexyl) phthalate  (EXP)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
cadmium dichloride  (ISO)
captan  (EXP)
carbon nanotube  (EXP)
CGP 52608  (ISO)
chloroprene  (ISO)
chromium(6+)  (EXP)
cisplatin  (ISO)
cobalt dichloride  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
Cuprizon  (ISO)
cyclosporin A  (ISO)
diarsenic trioxide  (ISO)
diethyl maleate  (EXP)
diethylstilbestrol  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
endosulfan  (ISO)
ethanol  (EXP)
flutamide  (ISO)
folpet  (EXP)
formaldehyde  (ISO)
FR900359  (ISO)
furan  (ISO)
genistein  (ISO)
gentamycin  (ISO)
glafenine  (ISO)
GW 4064  (EXP)
hydroquinone  (ISO)
inulin  (EXP)
ketoconazole  (ISO)
leflunomide  (EXP)
lipopolysaccharide  (ISO)
mitomycin C  (ISO)
N-methyl-4-phenylpyridinium  (ISO)
N-nitrosodiethylamine  (ISO)
N-nitrosodimethylamine  (ISO)
N1'-[2-[[5-[(dimethylamino)methyl]-2-furanyl]methylthio]ethyl]-N1-methyl-2-nitroethene-1,1-diamine  (ISO)
nefazodone  (ISO)
nickel atom  (ISO)
nickel sulfate  (ISO)
nimesulide  (ISO)
nitrofen  (ISO)
ochratoxin A  (ISO)
oxaliplatin  (ISO)
ozone  (EXP)
panobinostat  (ISO)
paracetamol  (EXP,ISO)
perfluorohexanesulfonic acid  (EXP)
perfluorooctane-1-sulfonic acid  (EXP)
phenobarbital  (EXP)
phenylephrine  (ISO)
phenylmercury acetate  (ISO)
PhIP  (ISO)
progesterone  (ISO)
raloxifene  (ISO)
ranitidine  (ISO)
resveratrol  (ISO)
SB 431542  (ISO)
silicon dioxide  (ISO)
silver atom  (EXP)
silver(0)  (EXP)
sodium arsenite  (ISO)
sodium dichromate  (EXP)
succimer  (EXP,ISO)
sunitinib  (ISO)
tacrolimus hydrate  (EXP)
tamoxifen  (EXP,ISO)
Tesaglitazar  (ISO)
testosterone  (ISO)
tetrachloromethane  (ISO)
thioacetamide  (ISO)
titanium dioxide  (EXP)
topotecan  (ISO)
torcetrapib  (ISO)
Tributyltin oxide  (EXP)
trichloroethene  (EXP,ISO)
trichostatin A  (ISO)
trimellitic anhydride  (EXP)
triphenyl phosphate  (ISO)
triptonide  (EXP)
triticonazole  (ISO)
troglitazone  (ISO)
valproic acid  (ISO)
vancomycin  (EXP)
vinclozolin  (ISO)
zinc atom  (ISO)
zinc(0)  (ISO)
zoledronic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IDA)
nucleoplasm  (ISO,TAS)
nucleus  (IBA,IDA)

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal astrocyte morphology  (IAGP)
abnormal basal ganglion morphology  (IAGP)
abnormal bone structure  (IAGP)
abnormal brain development  (IAGP)
abnormal branching of the mammary ductal tree  (IAGP)
abnormal epiphyseal plate morphology  (IAGP)
abnormal fat cell morphology  (IAGP)
abnormal forebrain development  (IAGP)
abnormal hippocampus development  (IAGP)
abnormal lateral ganglionic eminence morphology  (IAGP)
abnormal lateral ventricle morphology  (IAGP)
abnormal mammary gland luminal epithelium morphology  (IAGP)
abnormal mammary gland myoepithelium morphology  (IAGP)
abnormal medial ganglionic eminence morphology  (IAGP)
abnormal neocortex morphology  (IAGP)
abnormal neuron differentiation  (IAGP)
abnormal osteoblast morphology  (IAGP)
abnormal ovarian folliculogenesis  (IAGP)
abnormal ovarian medulla morphology  (IAGP)
abnormal ovary morphology  (IAGP)
abnormal stratification in cerebral cortex  (IAGP)
abnormal telencephalon morphology  (IAGP)
decreased body length  (IAGP)
decreased body weight  (IAGP)
decreased bone mineralization  (IAGP)
decreased bone ossification  (IAGP)
decreased brain size  (IAGP)
decreased circulating estradiol level  (IAGP)
decreased circulating estrogen level  (IAGP)
decreased locomotor activity  (IAGP)
decreased uterus weight  (IAGP)
increased atretic ovarian follicle number  (IAGP)
increased mature ovarian follicle number  (IAGP)
increased secondary ovarian follicle number  (IAGP)
increased tertiary ovarian follicle number  (IAGP)
postnatal growth retardation  (IAGP)
postnatal lethality, incomplete penetrance  (IAGP)
premature death  (IAGP)
premature neuronal precursor differentiation  (IAGP)
small lateral ventricles  (IAGP)
telencephalon hypoplasia  (IAGP)
weight loss  (IAGP)
References

References - curated
# Reference Title Reference Citation
1. Mouse brain organization revealed through direct genome-scale TF expression analysis. Gray PA, etal., Science 2004 Dec 24;306(5705):2255-7.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. MGD IEA MGD IEA
4. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:7547505   PMID:8139914   PMID:8759016   PMID:8922523   PMID:8989524   PMID:9418957   PMID:9831657   PMID:9838043   PMID:10197587   PMID:10349636   PMID:10436162   PMID:11042159  
PMID:11076861   PMID:11217851   PMID:11731247   PMID:12466851   PMID:12477932   PMID:12532109   PMID:14681479   PMID:15280210   PMID:15328020   PMID:15342729   PMID:15469968   PMID:15723065  
PMID:15800025   PMID:15882580   PMID:16141072   PMID:16141073   PMID:16148239   PMID:16407553   PMID:16602821   PMID:16682435   PMID:16766700   PMID:16862533   PMID:16887829   PMID:16893423  
PMID:16919269   PMID:17130451   PMID:17604724   PMID:17849441   PMID:18287559   PMID:18524893   PMID:18557763   PMID:19030180   PMID:19096764   PMID:19217292   PMID:19349107   PMID:19386638  
PMID:19777566   PMID:19838178   PMID:20059953   PMID:20211142   PMID:20236931   PMID:20436479   PMID:20460371   PMID:20610746   PMID:20628571   PMID:21098398   PMID:21145943   PMID:21194568  
PMID:21220101   PMID:21267068   PMID:21368052   PMID:21543770   PMID:21731673   PMID:21862448   PMID:21873635   PMID:22041901   PMID:22069192   PMID:22219353   PMID:22232070   PMID:22234186  
PMID:22235033   PMID:22988430   PMID:23312518   PMID:23404109   PMID:23546880   PMID:23638021   PMID:23786676   PMID:23920117   PMID:24154525   PMID:24952961   PMID:25038044   PMID:25810530  
PMID:25813983   PMID:26166575   PMID:26297811   PMID:26621350   PMID:26637354   PMID:26928066   PMID:26930384   PMID:27122033   PMID:27416896   PMID:27583450   PMID:27657450   PMID:28087628  
PMID:28219675   PMID:29513653   PMID:30026551   PMID:30126904   PMID:30305733   PMID:30884976   PMID:31149899   PMID:31257105   PMID:31390563   PMID:31550547   PMID:31552825   PMID:31843520  
PMID:32266943   PMID:32294451   PMID:32715478   PMID:33053343   PMID:33060561   PMID:33436697   PMID:33554073   PMID:33649223   PMID:33723434   PMID:34482420   PMID:34502541   PMID:34686326  
PMID:35020897   PMID:35089129   PMID:35103284   PMID:35175194   PMID:35377797   PMID:35905011   PMID:36094016   PMID:36263050   PMID:36535369   PMID:37298722   PMID:38011284   PMID:38342917  


Genomics

Comparative Map Data
Id4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391348,414,592 - 48,419,504 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1348,414,704 - 48,419,502 (+)EnsemblGRCm39 Ensembl
GRCm381348,261,116 - 48,266,028 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1348,261,228 - 48,266,026 (+)EnsemblGRCm38mm10GRCm38
MGSCv371348,356,796 - 48,359,405 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361348,273,364 - 48,275,973 (+)NCBIMGSCv36mm8
Celera1349,350,381 - 49,353,061 (+)NCBICelera
Cytogenetic Map13A5NCBI
cM Map1324.71NCBI
ID4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38619,837,370 - 19,842,197 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl619,837,370 - 19,842,197 (+)EnsemblGRCh38hg38GRCh38
GRCh37619,837,601 - 19,842,428 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36619,945,596 - 19,948,894 (+)NCBINCBI36Build 36hg18NCBI36
Build 34619,945,595 - 19,948,893NCBI
Celera621,070,861 - 21,074,159 (+)NCBICelera
Cytogenetic Map6p22.3NCBI
HuRef619,782,014 - 19,786,844 (+)NCBIHuRef
CHM1_1619,839,766 - 19,844,596 (+)NCBICHM1_1
T2T-CHM13v2.0619,709,014 - 19,713,841 (+)NCBIT2T-CHM13v2.0
Id4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81716,595,724 - 16,598,293 (-)NCBIGRCr8
mRatBN7.21716,389,387 - 16,391,956 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1716,389,387 - 16,392,470 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1716,269,665 - 16,272,236 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01717,873,494 - 17,876,065 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01716,195,273 - 16,197,843 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01716,692,557 - 16,695,126 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1716,692,557 - 16,695,126 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01718,744,511 - 18,747,080 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41722,525,292 - 22,527,861 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11722,525,291 - 22,527,861 (-)NCBI
Celera1716,113,430 - 16,115,946 (-)NCBICelera
Cytogenetic Map17p14NCBI
Id4
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554836,600,867 - 6,602,564 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554836,598,804 - 6,601,496 (-)NCBIChiLan1.0ChiLan1.0
ID4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2534,476,360 - 34,479,706 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1630,475,737 - 30,479,077 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0619,665,197 - 19,668,517 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
ID4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13518,358,518 - 18,360,767 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3518,357,826 - 18,359,011 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3518,357,826 - 18,359,011 (+)NCBICanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3518,306,552 - 18,309,524 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03518,464,103 - 18,467,094 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3518,463,709 - 18,465,771 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13518,276,216 - 18,279,196 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03518,339,930 - 18,342,928 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03519,757,627 - 19,760,617 (+)NCBIUU_Cfam_GSD_1.0
ID4
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl715,281,757 - 15,282,839 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1715,281,535 - 15,284,895 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2716,178,362 - 16,181,445 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ID4
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11752,349,908 - 52,353,218 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1752,348,388 - 52,353,281 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604420,104,714 - 20,109,525 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Id4
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247566,814,842 - 6,819,578 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247566,816,364 - 6,819,144 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Id4
131 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:281
Count of miRNA genes:202
Interacting mature miRNAs:242
Transcripts:ENSMUST00000021810
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
26884393Humsd7_mhumerus midshaft diameter 7, 16 week (mouse)13395000076048119Mouse
1558898Hpi1_mhapatic PMN infiltration 1 (mouse)Not determined13441402553101640Mouse
1301880Hypt_mhypertension (mouse)Not determined131815679252156924Mouse
13463469Gssq1_mglomerulosclerosis severity QTL 1 (mouse)131906090853061050Mouse
12880423V25Dq7_mvitamin D inactive form serum level QTL 7 (mouse)131958398353583983Mouse
1301015Sysbp2_msystolic blood pressure 2 (mouse)Not determined132047761259821605Mouse
4142147Mvwf4_mmodifier of von Willebrand factor 4 (mouse)Not determined20477612112898424Mouse
1357591Tesq1_mtestis weight QTL 1 (mouse)Not determined132061551255720517Mouse
4142009Pregq3_mpregnancy QTL 3 (mouse)Not determined132061551272385189Mouse
10045618Heal17_mwound healing/regeneration 17 (mouse)Not determined132074693954747056Mouse
4142489Ath25_matherosclerosis 25 (mouse)Not determined2583652959836529Mouse
10401111Pgia40_mproteoglycan induced arthritis 40 (mouse)Not determined132791846961918560Mouse
1300710Pcd4ts2_mp-glycoprotein positive CD4 T cell subset 2 (mouse)Not determined132821044262210544Mouse
1357802Vtbt15_mvertebral trabecular bone trait 15 (mouse)Not determined132821737962217515Mouse
10045621Heal21_mwound healing/regeneration 21 (mouse)Not determined132821737962217515Mouse
10755533Chol18_mcholesterol 18 (mouse)133096946764969467Mouse
10755517Chol15_mcholesterol 15 (mouse)133096946764969467Mouse
12738439Twq4_mtestis weight QTL 4 (mouse)133112911065129110Mouse
14696729Kidlq2_mkidney weight, left QTL 2 (mouse)133134473665344736Mouse
1301299Sluc23_msusceptibility to lung cancer 23 (mouse)Not determined133492194368922081Mouse
10412235Scgq5_mspontaneous crescentic glomerulonephritis QTL 5 (mouse)Not determined133606090896239162Mouse
1357587Pfat3_mpredicted fat percentage 3 (mouse)Not determined133610153070101640Mouse
1301734Acsns2_mAngiostrongylus costaricensis nematode susceptibility 2 (mouse)Not determined133610153070101640Mouse
1300561Heal7_mwound healing/regeneration 7 (mouse)Not determined133614482070144904Mouse
1300862Cfbw5_mcystic fibrosis body weight 5 (mouse)Not determined133872035872720517Mouse
1300985Bmd13_mbone mineral density 13 (mouse)Not determined133962924973629397Mouse
1302157Bwem2_mbody weight day 30 males 2 (mouse)Not determined133962924973629397Mouse
1301801Cpfd5_mcerebellum pattern fissures (mouse)Not determined133962924973629397Mouse
15039353Nmrs35_mNAFLD-associated magnetic resonance shift 35 (mouse)134058825374588253Mouse
1300668Pas10_mpulmonary adenoma susceptibility 10 (mouse)Not determined134148904275489158Mouse
12738427Lfibq24_mliver fibrosis QTL 24 (mouse)134425810752758667Mouse
4142331Bxs6_mBXSB/MpJ autoimmune nephritis 6 (mouse)Not determined4521044283744746Mouse
10412109Bxs7_mBXSB/MpJ autoimmune nephritis 7 (mouse)Not determined134521044283744746Mouse
26884396Humsd4_mhumerus midshaft diameter 4, 10 week (mouse)134785347673148119Mouse

Markers in Region
X75018  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381348,263,073 - 48,263,263UniSTSGRCm38
MGSCv371348,358,442 - 48,358,632UniSTSGRCm37
Celera1349,352,098 - 49,352,288UniSTS
Cytogenetic Map13A5UniSTS
Cytogenetic Map13BUniSTS
cM Map1331.0UniSTS
Whitehead_YAC13 UniSTS
Id4  
Mouse AssemblyChrPosition (strand)SourceJBrowse
MGSCv371348,357,057 - 48,357,207UniSTSGRCm37
Celera1349,350,713 - 49,350,863UniSTS
Cytogenetic Map13BUniSTS
cM Map1331.0UniSTS
RH144051  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381348,262,723 - 48,262,871UniSTSGRCm38
MGSCv371348,358,092 - 48,358,240UniSTSGRCm37
Celera1349,351,748 - 49,351,896UniSTS
Cytogenetic Map13A5UniSTS
Cytogenetic Map13BUniSTS
cM Map1331.0UniSTS
PMC133998P7  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381348,261,498 - 48,262,308UniSTSGRCm38
MGSCv371348,356,867 - 48,357,677UniSTSGRCm37
Celera1349,350,452 - 49,351,333UniSTS
Cytogenetic Map13BUniSTS
Cytogenetic Map13A5UniSTS
cM Map1331.0UniSTS
Idb4  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381348,261,492 - 48,262,969UniSTSGRCm38
MGSCv371348,356,861 - 48,358,338UniSTSGRCm37
Celera1349,350,446 - 49,351,994UniSTS
Cytogenetic Map13BUniSTS
Cytogenetic Map13A5UniSTS
cM Map1331.0UniSTS
Idb4  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381348,261,694 - 48,262,310UniSTSGRCm38
MGSCv371348,357,063 - 48,357,679UniSTSGRCm37
Celera1349,350,719 - 49,351,335UniSTS
Cytogenetic Map13A5UniSTS
Cytogenetic Map13BUniSTS
cM Map1331.0UniSTS
Id4  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381348,261,688 - 48,261,838UniSTSGRCm38
MGSCv371348,357,057 - 48,357,207UniSTSGRCm37
Celera1349,350,713 - 49,350,863UniSTS
Cytogenetic Map13A5UniSTS
Cytogenetic Map13BUniSTS


Expression


Sequence


RefSeq Acc Id: ENSMUST00000021810   ⟹   ENSMUSP00000021810
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1348,414,704 - 48,419,502 (+)Ensembl
GRCm38.p6 Ensembl1348,261,228 - 48,266,026 (+)Ensembl
RefSeq Acc Id: NM_031166   ⟹   NP_112443
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391348,414,592 - 48,419,504 (+)NCBI
GRCm381348,261,116 - 48,266,028 (+)NCBI
MGSCv371348,356,796 - 48,359,405 (+)RGD
Celera1349,350,381 - 49,353,061 (+)RGD
cM Map13 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_112443   ⟸   NM_031166
- UniProtKB: P41139 (UniProtKB/Swiss-Prot),   Q544D2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000021810   ⟸   ENSMUST00000021810
Protein Domains
bHLH

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P41139-F1-model_v2 AlphaFold P41139 1-161 view protein structure

Promoters
RGD ID:8680262
Promoter ID:EPDNEW_M18161
Type:initiation region
Name:Id4_1
Description:Mus musculus inhibitor of DNA binding 4 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381348,261,500 - 48,261,560EPDNEW
RGD ID:6824063
Promoter ID:MM_KWN:14011
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6
Transcripts:NM_031166
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361348,356,056 - 48,357,232 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:99414 AgrOrtholog
Ensembl Genes ENSMUSG00000021379 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000021810 ENTREZGENE
  ENSMUST00000021810.3 UniProtKB/Swiss-Prot
Gene3D-CATH 4.10.280.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro bHLH_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DNA-bd_prot-inh UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HLH_DNA-bd_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:15904 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:99414 ENTREZGENE
NCBI Gene 15904 ENTREZGENE
PANTHER DNA-BINDING PROTEIN INHIBITOR ID-4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR11723 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam HLH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Id4 PhenoGen
PROSITE BHLH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART HLH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF47459 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt ID4_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q544D2 ENTREZGENE, UniProtKB/TrEMBL