Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:ventral spinal cord interneuron fate commitment
go back to main search page
Accession:GO:0060579 term browser browse the term
Definition:The process in which the developmental fate of a cell becomes restricted such that it will develop into a ventral spinal cord interneuron. Ventral spinal cord interneurons are cells located in the ventral portion of the spinal cord that transmit signals between sensory and motor neurons and are required for reflexive responses.


show annotations for term's descendants           Sort by:
 
ventral spinal cord interneuron fate commitment term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 IMP (MGI:3587461|PMID:16020526) UniProt PMID:16020526 MGI:3587461 NCBI chr10:87,490,819...87,493,660
Ensembl chr10:87,490,819...87,493,660
JBrowse link
G Dll4 delta like canonical Notch ligand 4 ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:119,325,784...119,335,666
Ensembl chr 2:119,325,784...119,335,962
JBrowse link
G Foxn4 forkhead box N4 IMP (MGI:3587461|PMID:16020526), (MGI:3765356|PMID:17728344) UniProt PMID:16020526 PMID:17728344 MGI:3587461 MGI:3765356 NCBI chr 5:114,254,164...114,274,418
Ensembl chr 5:114,254,164...114,273,807
JBrowse link
smoothened signaling pathway involved in ventral spinal cord interneuron specification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gli2 GLI-Kruppel family member GLI2 IGI (MGI:3051712|PMID:15215207) MGI PMID:15215207 MGI:3051712 NCBI chr 1:118,834,061...119,054,405
Ensembl chr 1:118,834,132...119,053,619
JBrowse link
G Gli3 GLI-Kruppel family member GLI3 IGI (MGI:3051712|PMID:15215207) MGI PMID:15215207 MGI:3051712 NCBI chr13:15,463,723...15,730,026
Ensembl chr13:15,463,235...15,730,026
JBrowse link
G Sufu SUFU negative regulator of hedgehog signaling IMP (MGI:4355593|PMID:19684112) MGI PMID:19684112 MGI:4355593 NCBI chr19:46,396,896...46,488,804
Ensembl chr19:46,396,896...46,488,804
JBrowse link
ventral spinal cord interneuron fate determination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nkx2-2 NK2 homeobox 2 IMP (MGI:1334824|PMID:10217145) MGI PMID:10217145 MGI:1334824 NCBI chr 2:147,176,485...147,195,434
Ensembl chr 2:147,177,546...147,194,243
JBrowse link
ventral spinal cord interneuron specification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dbx1 developing brain homeobox 1 IMP (MGI:2136554|PMID:11239429) MGI PMID:11239429 MGI:2136554 NCBI chr 7:49,631,499...49,636,835
Ensembl chr 7:49,631,499...49,636,849
JBrowse link
G Dmrt3 doublesex and mab-3 related transcription factor 3 IMP (MGI:5435948|PMID:22932389) MGI PMID:22932389 MGI:5435948 NCBI chr19:25,610,246...25,623,921
Ensembl chr19:25,610,301...25,623,921
JBrowse link
G Lhx3 LIM homeobox protein 3 IDA (MGI:4356383|PMID:19666821) MGI PMID:19666821 MGI:4356383 NCBI chr 2:26,200,212...26,208,249
Ensembl chr 2:26,200,212...26,208,289
JBrowse link
G Shh sonic hedgehog ISO MGI GO_REF:0000008 MGI:2154458 NCBI chr 5:28,456,840...28,467,101
Ensembl chr 5:28,456,815...28,467,256
JBrowse link
G Sox1 SRY (sex determining region Y)-box 1 IMP (MGI:4834949|PMID:20844123) MGI PMID:20844123 MGI:4834949 NCBI chr 8:12,395,519...12,399,555
Ensembl chr 8:12,395,295...12,400,126
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 23351
    multicellular organismal process 8896
      pattern specification process 481
        cell fate commitment involved in pattern specification 12
          ventral spinal cord interneuron fate commitment 12
            ventral spinal cord interneuron fate determination 1
            ventral spinal cord interneuron specification + 8
Path 2
Term Annotations click to browse term
  biological_process 23351
    developmental process 7041
      anatomical structure development 6519
        multicellular organism development 5981
          system development 5394
            nervous system development 2729
              neurogenesis 1945
                generation of neurons 1791
                  neuron differentiation 1624
                    central nervous system neuron differentiation 247
                      ventral spinal cord interneuron differentiation 14
                        ventral spinal cord interneuron fate commitment 12
                          ventral spinal cord interneuron fate determination 1
                          ventral spinal cord interneuron specification + 8
paths to the root