Arnt2 (aryl hydrocarbon receptor nuclear translocator 2) - Rat Genome Database

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Gene: Arnt2 (aryl hydrocarbon receptor nuclear translocator 2) Mus musculus
Analyze
Symbol: Arnt2
Name: aryl hydrocarbon receptor nuclear translocator 2
RGD ID: 10190
MGI Page MGI
Description: Exhibits several functions, including DNA-binding transcription activator activity, RNA polymerase II-specific; aryl hydrocarbon receptor binding activity; and protein heterodimerization activity. Involved in central nervous system development; in utero embryonic development; and positive regulation of transcription by RNA polymerase II. Localizes to transcription regulator complex. Is expressed in several structures, including alimentary system; central nervous system; genitourinary system; respiratory system; and sensory organ. Orthologous to human ARNT2 (aryl hydrocarbon receptor nuclear translocator 2); PARTICIPATES IN aryl hydrocarbon receptor signaling pathway; hypoxia inducible factor pathway; renal cell carcinoma pathway; INTERACTS WITH 1,2-dichloroethane; 2,3',4,4',5-Pentachlorobiphenyl; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: ARNT protein 2; bHLHe; bHLHe1; Hif-2b; mKIAA0307
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39783,895,482 - 84,060,949 (-)NCBIGRCm39mm39
GRCm39 Ensembl783,895,486 - 84,059,384 (-)Ensembl
GRCm38784,246,274 - 84,411,741 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl784,246,278 - 84,410,176 (-)EnsemblGRCm38mm10GRCm38
MGSCv37791,394,788 - 91,510,183 (-)NCBIGRCm37mm9NCBIm37
MGSCv36784,122,463 - 84,286,144 (-)NCBImm8
Celera781,653,324 - 81,768,781 (-)NCBICelera
Cytogenetic Map7D3NCBI
cM Map748.35NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane  (ISO)
1,2-dichloroethane  (EXP)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (ISO)
17beta-estradiol 3-benzoate  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3',4,4',5-Pentachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-methylcholine  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
6-propyl-2-thiouracil  (ISO)
afimoxifene  (ISO)
aflatoxin B1  (ISO)
ammonium chloride  (ISO)
antirheumatic drug  (ISO)
arsenous acid  (ISO)
belinostat  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
beta-naphthoflavone  (ISO)
bis(2-chloroethyl) sulfide  (EXP)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (ISO)
Butylbenzyl phthalate  (ISO)
captan  (EXP)
choline  (EXP)
cisplatin  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
cyclosporin A  (ISO)
D-gluconic acid  (ISO)
decabromodiphenyl ether  (ISO)
deoxycholic acid  (ISO)
dexamethasone  (ISO)
diarsenic trioxide  (ISO)
dibutyl phthalate  (ISO)
diethyl phthalate  (ISO)
diisobutyl phthalate  (ISO)
diisononyl phthalate  (ISO)
disodium selenite  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
endosulfan  (ISO)
entinostat  (ISO)
fenvalerate  (ISO)
flavonoids  (ISO)
folic acid  (EXP)
folpet  (EXP)
fulvestrant  (ISO)
furan  (ISO)
genistein  (ISO)
indometacin  (ISO)
isoprenaline  (ISO)
L-methionine  (EXP)
linsidomine  (ISO)
maneb  (EXP)
methamphetamine  (ISO)
nickel sulfate  (ISO)
panobinostat  (ISO)
paracetamol  (ISO)
paraquat  (EXP)
progesterone  (ISO)
raloxifene  (ISO)
SB 431542  (ISO)
tetrachloromethane  (EXP,ISO)
trichostatin A  (ISO)
triptonide  (EXP)
troglitazone  (ISO)
valproic acid  (ISO)
vorinostat  (ISO)
zalcitabine  (ISO)
zoledronic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
References

Additional References at PubMed
PMID:8657146   PMID:8889548   PMID:8927054   PMID:9545558   PMID:9722945   PMID:10349636   PMID:10640708   PMID:10995574   PMID:11025203   PMID:11042159   PMID:11076861   PMID:11217851  
PMID:11247670   PMID:11318878   PMID:11381139   PMID:11782478   PMID:12215665   PMID:12465718   PMID:12477932   PMID:15466261   PMID:15489334   PMID:15782199   PMID:16141072   PMID:16141073  
PMID:16284245   PMID:16824955   PMID:17023418   PMID:17356169   PMID:17826745   PMID:18096572   PMID:18287559   PMID:18557763   PMID:19074369   PMID:19303107   PMID:20412781   PMID:20495570  
PMID:21267068   PMID:21677750   PMID:21873635   PMID:24154525   PMID:24952961   PMID:25405996   PMID:27782878   PMID:28705898   PMID:28706241   PMID:29031500   PMID:30231889   PMID:30442666  
PMID:30563851   PMID:30846309   PMID:32325033  


Genomics

Comparative Map Data
Arnt2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39783,895,482 - 84,060,949 (-)NCBIGRCm39mm39
GRCm39 Ensembl783,895,486 - 84,059,384 (-)Ensembl
GRCm38784,246,274 - 84,411,741 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl784,246,278 - 84,410,176 (-)EnsemblGRCm38mm10GRCm38
MGSCv37791,394,788 - 91,510,183 (-)NCBIGRCm37mm9NCBIm37
MGSCv36784,122,463 - 84,286,144 (-)NCBImm8
Celera781,653,324 - 81,768,781 (-)NCBICelera
Cytogenetic Map7D3NCBI
cM Map748.35NCBI
ARNT2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1580,404,350 - 80,597,933 (+)EnsemblGRCh38hg38GRCh38
GRCh381580,404,382 - 80,597,933 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371580,696,724 - 80,890,274 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361578,483,747 - 78,677,333 (+)NCBINCBI36hg18NCBI36
Build 341578,483,888 - 78,677,327NCBI
Celera1557,634,149 - 57,827,949 (+)NCBI
Cytogenetic Map15q25.1NCBI
HuRef1557,454,998 - 57,648,448 (+)NCBIHuRef
CHM1_11580,814,701 - 81,008,291 (+)NCBICHM1_1
Arnt2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21138,236,235 - 138,392,868 (-)NCBI
Rnor_6.0 Ensembl1146,399,217 - 146,556,171 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01146,399,217 - 146,556,437 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01147,280,828 - 147,485,173 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41140,535,823 - 140,646,838 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11140,618,128 - 140,771,554 (-)NCBI
Celera1130,254,815 - 130,411,200 (-)NCBICelera
Cytogenetic Map1q31NCBI
Arnt2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541611,308,846 - 11,429,365 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541611,279,866 - 11,429,365 (+)NCBIChiLan1.0ChiLan1.0
ARNT2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11578,370,762 - 78,530,228 (+)NCBIpanpan1.1PanPan1.1panPan2
Mhudiblu_PPA_v01559,376,993 - 59,573,925 (+)NCBIMhudiblu_PPA_v0panPan3
ARNT2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1357,005,106 - 57,139,585 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl357,008,570 - 57,159,713 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha359,655,962 - 59,811,362 (-)NCBI
ROS_Cfam_1.0357,429,824 - 57,585,366 (-)NCBI
UMICH_Zoey_3.1356,940,023 - 57,064,985 (-)NCBI
UNSW_CanFamBas_1.0357,146,234 - 57,298,136 (-)NCBI
UU_Cfam_GSD_1.0357,482,842 - 57,638,341 (-)NCBI
Arnt2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640126,115,254 - 126,292,816 (+)NCBI
SpeTri2.0NW_00493648320,041,712 - 20,218,853 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ARNT2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl749,258,910 - 49,450,463 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1749,259,118 - 49,450,471 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2754,768,266 - 54,959,560 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ARNT2
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1262,790,059 - 2,990,760 (-)NCBI
ChlSab1.1 Ensembl262,794,372 - 2,990,814 (-)Ensembl
Arnt2
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462476821,166,554 - 21,319,462 (-)NCBI

Position Markers
D63644  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38784,249,803 - 84,249,954UniSTSGRCm38
MGSCv37791,398,313 - 91,398,464UniSTSGRCm37
Celera781,656,849 - 81,657,000UniSTS
Cytogenetic Map7D3UniSTS
cM Map742.5UniSTS
Whitehead_YAC7 UniSTS
Arnt2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map7D3UniSTS
cM Map742.5UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300722Sle3_msystemic lupus erythmatosus susceptibility 3 (mouse)Not determined7346321287493512Mouse
25314307Mlh1fc2_mMLH1 foci count 2 (mouse)76500000133900000Mouse
10412199Sst2_msusceptibility to tuberculosis 2 (mouse)Not determined718994869119886157Mouse
1301158Eae4_msusceptibility to experimental allergic encephalomyelitis 4 (mouse)Not determined719413473142366067Mouse
26884404Huml1_mhumerus length 1, 5 week (mouse)730500000109400000Mouse
1301514Rigs1_mradiation induced gastroschisis 1 (mouse)Not determined73658059092745138Mouse
1301082Bbaa16_mB.burgdorferi-associated arthritis 16 (mouse)Not determined736580590116817642Mouse
25314303Vmm4_mvariable multisystem mineralization 4, kidney (mouse)73760000087400000Mouse
1300791Abbp3_mA/J and C57BL/6 blood pressure 3 (mouse)Not determined740024463103860803Mouse
10043926Bw1n_mbody weight 1 in NSY (mouse)Not determined745512542119094307Mouse
10054064Bwq11_mbody weight QTL 11 (mouse)Not determined75147520685475345Mouse
10053685Eae43_mexperimental allergic encephalomyelitis susceptibility 43 (mouse)Not determined75147520685475345Mouse
13208555Lgth10_mbody length 10 (mouse)752000000126000000Mouse
12880418V125Dq6_mvitamin D active form serum level QTL 6 (mouse)75250000086500000Mouse
27226751Femd5_mfemur midshaft diameter 5, 10 week (mouse)753600000143600000Mouse
25823170Hrsq7_mhost response to SARS QTL 7, log titer (mouse)755169841117223580Mouse
11565101Tsve1_mvariable short tail (Tsv) enhancer 1 (mouse)75623976087493512Mouse
27226778Femd11_mfemur midshaft diameter 11, 16 week (mouse)757300000134400000Mouse
1300952Hcs1_mhepatocarcinogenesis susceptibility 1 (mouse)Not determined75767637391676604Mouse
1301465Egrm3_mearly growth rate (mouse)Not determined75767637391676604Mouse
1301663Skull9_mskull morphology 9 (mouse)Not determined75767637391676604Mouse
26884408Bzwq13_mbi-zygomatic width QTL 13, 16 week (mouse)762100000121800000Mouse
27095916Scvln15_msacral vertebrae length 2, 16 week (mouse)762100000124100000Mouse
25314305Vmm6_mvariable multisystem mineralization 6, eye (mouse)762200000103100000Mouse
1301383Aem2_manti-erythrocyte autoantibody modifier 2 (mouse)Not determined76448567698485905Mouse
26884381Bzwq2_mbi-zygomatic width QTL 2, 5 week (mouse)76560000097300000Mouse
26884440Sklq4_mskull length QTL 4, 5 week (mouse)765600000126900000Mouse
11553865Stmm1c_mskin tumor modifier of MSM 1c (mouse)766139778100139778Mouse
11553866Stmm1d_mskin tumor modifier of MSM 1d (mouse)766139778100139778Mouse
27095937Ulnl7_mulna length 7, 10 week (mouse)76680000098700000Mouse
12801463Rta1_mretinal aging 1 (mouse)76751827989440781Mouse
1301784Ses2_msalmonella enteritidis susceptibility 2 (mouse)Not determined767640886101641032Mouse
1301826Pgia3_mproteoglycan induced arthritis 3 (mouse)Not determined767640886101641032Mouse
1300620Pgia21_mproteoglycan induced arthritis 21 (mouse)Not determined767640886101641032Mouse
26884418Bzwq7_mbi-zygomatic width QTL 7, 10 week (mouse)768200000105800000Mouse
27226715Metcl3_mmetatarsal-calcaneal length 3, 5 week (mouse)768200000119900000Mouse
26884444Sklq8_mskull length QTL 8, 10 week (mouse)768200000124600000Mouse
26884451Sklq14_mskull length QTL 14, 16 week (mouse)768200000125400000Mouse
1300654Bomd1_mbone mineral density 1 (mouse)Not determined768716387102716494Mouse
27095907Scvln4_msacral vertebrae length 2, 5 week (mouse)770300000120900000Mouse
1301155Bpq7_mblood pressure QTL 7 (mouse)Not determined770493929104494171Mouse
10043973Obq29_mobesity QTL 29 (mouse)Not determined772614164106614164Mouse
4142319Powg_mpost-ovarectomy weight gain (mouse)Not determined7320735792932955Mouse
27095910Pglq13_mpelvic girdle length QTL 13, 16 week (mouse)773400000126100000Mouse
27095933Ulnl3_mulna length 3, 5 week (mouse)773500000143600000Mouse
11553869Stmm2b_mskin tumor modifier of MSM 2a (mouse)774076757108076757Mouse
4142212Png1_mPostnatal growth 1 (mouse)Not determined7467637392745138Mouse
27226745Metcl9_mmetatarsal-calcaneal length 9, 10 week (mouse)775200000122600000Mouse
27226781Tibl3_mtibia length 3, 5 week (mouse)775200000122600000Mouse
1301566Adip3_madiposity 3 (mouse)Not determined775745007109745138Mouse
14746989Manh62_mmandible shape 62 (mouse)776093321110093321Mouse
26884398Humsd6_mhumerus midshaft diameter 6, 16 week (mouse)779000000137300000Mouse
4142500Morq1_mmodifier of Rs1 QTL 1 (mouse)Not determined80902474114902584Mouse
10412110Cctq1_mcentral corneal thickness QTL 1 (mouse)Not determined780902474114902584Mouse
27095930Ulnl10_mulna length 10, 16 week (mouse)781200000127100000Mouse
27095923Pglq3_mpelvic girdle length QTL 3, 5 week (mouse)781600000124600000Mouse
27095903Scvln10_msacral vertebrae length 2, 10 week (mouse)781800000126900000Mouse
27226765Tibl18_mtibia length 18, 16 week (mouse)782200000126900000Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1780
Count of miRNA genes:711
Interacting mature miRNAs:925
Transcripts:ENSMUST00000085077
Prediction methods:Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_007488 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006507238 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006507239 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006507242 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006507243 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006507244 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011241655 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030242017 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036152600 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036152601 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036152602 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036152603 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB093225 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC101659 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC101776 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK032628 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK051629 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK194814 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC054546 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM115235 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BU056629 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466543 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  D63644 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000085077   ⟹   ENSMUSP00000082154
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl784,246,278 - 84,410,119 (-)Ensembl
RefSeq Acc Id: ENSMUST00000207459
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl784,267,926 - 84,275,871 (-)Ensembl
RefSeq Acc Id: ENSMUST00000207759
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl784,305,229 - 84,311,181 (-)Ensembl
RefSeq Acc Id: ENSMUST00000207769   ⟹   ENSMUSP00000146414
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl784,343,851 - 84,410,176 (-)Ensembl
RefSeq Acc Id: ENSMUST00000208129   ⟹   ENSMUSP00000146614
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl784,268,842 - 84,310,978 (-)Ensembl
RefSeq Acc Id: ENSMUST00000208204   ⟹   ENSMUSP00000146781
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl784,309,092 - 84,409,883 (-)Ensembl
RefSeq Acc Id: ENSMUST00000208232   ⟹   ENSMUSP00000146413
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl784,246,281 - 84,372,531 (-)Ensembl
RefSeq Acc Id: ENSMUST00000208392   ⟹   ENSMUSP00000146776
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl784,347,432 - 84,372,495 (-)Ensembl
RefSeq Acc Id: ENSMUST00000208564   ⟹   ENSMUSP00000146989
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl784,250,076 - 84,263,775 (-)Ensembl
RefSeq Acc Id: ENSMUST00000208863   ⟹   ENSMUSP00000146868
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl784,347,436 - 84,372,658 (-)Ensembl
RefSeq Acc Id: ENSMUST00000208936
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl784,275,390 - 84,282,394 (-)Ensembl
RefSeq Acc Id: ENSMUST00000208995   ⟹   ENSMUSP00000146599
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl784,310,945 - 84,409,963 (-)Ensembl
RefSeq Acc Id: ENSMUST00000209133   ⟹   ENSMUSP00000147129
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl784,246,281 - 84,367,911 (-)Ensembl
RefSeq Acc Id: NM_007488   ⟹   NP_031514
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39783,895,483 - 84,059,246 (-)NCBI
GRCm38784,246,275 - 84,410,038 (-)NCBI
MGSCv37791,394,788 - 91,510,183 (-)RGD
Celera781,653,321 - 81,815,277 (-)NCBI
cM Map7 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006507238   ⟹   XP_006507301
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39783,895,486 - 84,020,146 (-)NCBI
GRCm38784,246,278 - 84,367,863 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006507239   ⟹   XP_006507302
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39783,895,493 - 84,060,949 (-)NCBI
GRCm38784,246,274 - 84,411,741 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006507242   ⟹   XP_006507305
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39783,895,486 - 84,059,107 (-)NCBI
GRCm38784,246,278 - 84,409,892 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006507243   ⟹   XP_006507306
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39783,895,493 - 84,021,698 (-)NCBI
GRCm38784,246,274 - 84,372,490 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006507244   ⟹   XP_006507307
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39783,895,482 - 84,059,536 (-)NCBI
GRCm38784,246,274 - 84,410,113 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011241655   ⟹   XP_011239957
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39783,895,486 - 84,059,257 (-)NCBI
GRCm38784,246,278 - 84,411,741 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030242017   ⟹   XP_030097877
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39783,895,486 - 84,016,531 (-)NCBI
GRCm38784,246,278 - 84,361,944 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036152600   ⟹   XP_036008493
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39783,895,486 - 84,020,162 (-)NCBI
RefSeq Acc Id: XM_036152601   ⟹   XP_036008494
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39783,895,486 - 84,020,163 (-)NCBI
RefSeq Acc Id: XM_036152602   ⟹   XP_036008495
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39783,895,486 - 84,011,152 (-)NCBI
RefSeq Acc Id: XM_036152603   ⟹   XP_036008496
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39783,895,486 - 84,020,172 (-)NCBI
Reference Sequences
RefSeq Acc Id: NP_031514   ⟸   NM_007488
- UniProtKB: Q61324 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006507307   ⟸   XM_006507244
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_006507302   ⟸   XM_006507239
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006507305   ⟸   XM_006507242
- Peptide Label: isoform X3
- UniProtKB: Q61324 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006507306   ⟸   XM_006507243
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_006507301   ⟸   XM_006507238
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_011239957   ⟸   XM_011241655
- Peptide Label: isoform X3
- UniProtKB: Q61324 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_030097877   ⟸   XM_030242017
- Peptide Label: isoform X3
RefSeq Acc Id: ENSMUSP00000082154   ⟸   ENSMUST00000085077
RefSeq Acc Id: ENSMUSP00000146989   ⟸   ENSMUST00000208564
RefSeq Acc Id: ENSMUSP00000146614   ⟸   ENSMUST00000208129
RefSeq Acc Id: ENSMUSP00000146776   ⟸   ENSMUST00000208392
RefSeq Acc Id: ENSMUSP00000146413   ⟸   ENSMUST00000208232
RefSeq Acc Id: ENSMUSP00000146781   ⟸   ENSMUST00000208204
RefSeq Acc Id: ENSMUSP00000146599   ⟸   ENSMUST00000208995
RefSeq Acc Id: ENSMUSP00000146868   ⟸   ENSMUST00000208863
RefSeq Acc Id: ENSMUSP00000146414   ⟸   ENSMUST00000207769
RefSeq Acc Id: ENSMUSP00000147129   ⟸   ENSMUST00000209133
RefSeq Acc Id: XP_036008496   ⟸   XM_036152603
- Peptide Label: isoform X3
RefSeq Acc Id: XP_036008494   ⟸   XM_036152601
- Peptide Label: isoform X3
RefSeq Acc Id: XP_036008493   ⟸   XM_036152600
- Peptide Label: isoform X3
RefSeq Acc Id: XP_036008495   ⟸   XM_036152602
- Peptide Label: isoform X3
Protein Domains
bHLH   PAC   PAS

Promoters
RGD ID:8664685
Promoter ID:EPDNEW_M10374
Type:initiation region
Name:Arnt2_1
Description:Mus musculus aryl hydrocarbon receptor nuclear translocator 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38784,409,993 - 84,410,053EPDNEW
RGD ID:6840646
Promoter ID:MM_KWN:51411
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:UC009IEF.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36791,519,536 - 91,520,036 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:107188 AgrOrtholog
Ensembl Genes ENSMUSG00000015709 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000082154 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000146413 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000146414 UniProtKB/TrEMBL
  ENSMUSP00000146599 UniProtKB/TrEMBL
  ENSMUSP00000146614 UniProtKB/TrEMBL
  ENSMUSP00000146776 UniProtKB/TrEMBL
  ENSMUSP00000146781 UniProtKB/TrEMBL
  ENSMUSP00000146868 UniProtKB/TrEMBL
  ENSMUSP00000146989 UniProtKB/TrEMBL
  ENSMUSP00000147129 ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000085077 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000207769 UniProtKB/TrEMBL
  ENSMUST00000208129 UniProtKB/TrEMBL
  ENSMUST00000208204 UniProtKB/TrEMBL
  ENSMUST00000208232 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000208392 UniProtKB/TrEMBL
  ENSMUST00000208564 UniProtKB/TrEMBL
  ENSMUST00000208863 UniProtKB/TrEMBL
  ENSMUST00000208995 UniProtKB/TrEMBL
  ENSMUST00000209133 ENTREZGENE, UniProtKB/Swiss-Prot
Gene3D-CATH 4.10.280.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro bHLH_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HLH_DNA-bd_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Nuc_translocat UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PAC UniProtKB/Swiss-Prot
  PAS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PAS-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PAS_fold UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:11864 UniProtKB/Swiss-Prot
MGD MGI:107188 ENTREZGENE
NCBI Gene 11864 ENTREZGENE
Pfam HLH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PAS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Arnt2 PhenoGen
PRINTS NCTRNSLOCATR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE BHLH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PAS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART HLH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PAC UniProtKB/Swiss-Prot
  PAS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF47459 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF55785 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
TIGRFAMs sensory_box UniProtKB/Swiss-Prot
UniProt A0A140LHH4_MOUSE UniProtKB/TrEMBL
  A0A140LHY4_MOUSE UniProtKB/TrEMBL
  A0A140LHZ6_MOUSE UniProtKB/TrEMBL
  A0A140LID4_MOUSE UniProtKB/TrEMBL
  A0A140LID9_MOUSE UniProtKB/TrEMBL
  A0A140LIL3_MOUSE UniProtKB/TrEMBL
  A0A140LIW9_MOUSE UniProtKB/TrEMBL
  ARNT2_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
UniProt Secondary Q7TQG2 UniProtKB/Swiss-Prot
  Q8CHG9 UniProtKB/Swiss-Prot