Tnfrsf21 (tumor necrosis factor receptor superfamily, member 21) - Rat Genome Database

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Gene: Tnfrsf21 (tumor necrosis factor receptor superfamily, member 21) Mus musculus
Analyze
Symbol: Tnfrsf21
Name: tumor necrosis factor receptor superfamily, member 21
RGD ID: 1316427
MGI Page MGI
Description: Involved in several processes, including negative regulation of cytokine production; negative regulation of lymphocyte proliferation; and oligodendrocyte apoptotic process. Located in axon and plasma membrane. Is expressed in several structures, including lip; lung; metanephros; nervous system; and nose. Orthologous to human TNFRSF21 (TNF receptor superfamily member 21).
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: AA959878; Death receptor 6; DR; DR6; R74815; TNFR-related death receptor 6; TNFR-related death receptor-6; TR; TR7; tumor necrosis factor receptor superfamily member 21
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391743,327,446 - 43,400,079 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1743,327,446 - 43,400,080 (+)EnsemblGRCm39 Ensembl
GRCm381743,016,555 - 43,089,188 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1743,016,555 - 43,089,189 (+)EnsemblGRCm38mm10GRCm38
MGSCv371743,153,504 - 43,226,137 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361742,480,039 - 42,552,546 (+)NCBIMGSCv36mm8
Celera1746,437,745 - 46,511,566 (+)NCBICelera
Cytogenetic Map17B3NCBI
cM Map1719.69NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (ISO)
1,1-dichloroethene  (EXP)
1,2-dimethylhydrazine  (EXP)
1-naphthyl isothiocyanate  (ISO)
17beta-estradiol  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-palmitoylglycerol  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (ISO)
3-methylcholanthrene  (EXP)
3-phenylprop-2-enal  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (EXP)
6-propyl-2-thiouracil  (ISO)
acetamide  (ISO)
acrylamide  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (EXP,ISO)
Archazolid B  (ISO)
arsenous acid  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
benzoates  (ISO)
biochanin A  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
Butylparaben  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
caffeine  (ISO)
calcitriol  (ISO)
carbamazepine  (ISO)
CGP 52608  (ISO)
chlordecone  (EXP)
chloroprene  (EXP)
choline  (EXP)
cisplatin  (ISO)
clofibrate  (EXP)
cobalt dichloride  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
coumestrol  (ISO)
crocidolite asbestos  (ISO)
curcumin  (ISO)
cyclosporin A  (ISO)
decabromodiphenyl ether  (ISO)
diarsenic trioxide  (ISO)
dibutyl phthalate  (EXP)
dicrotophos  (ISO)
diethylstilbestrol  (EXP)
dioxygen  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
endosulfan  (ISO)
Enterolactone  (ISO)
ethanol  (EXP)
ethylparaben  (ISO)
fenofibrate  (ISO)
fenvalerate  (ISO)
fluoranthene  (EXP)
folic acid  (EXP)
FR900359  (ISO)
genistein  (EXP)
hydrogen peroxide  (ISO)
ibuprofen  (ISO)
indometacin  (ISO)
L-methionine  (EXP)
lead(0)  (ISO)
leflunomide  (ISO)
maneb  (EXP)
melittin  (ISO)
mercury dibromide  (ISO)
metformin  (ISO)
methimazole  (ISO)
methotrexate  (ISO)
methylmercury chloride  (ISO)
methylparaben  (ISO)
mono(2-ethylhexyl) phthalate  (EXP,ISO)
N-nitrosodiethylamine  (EXP,ISO)
N-Nitrosopyrrolidine  (ISO)
ozone  (ISO)
p-menthan-3-ol  (ISO)
paclitaxel  (ISO)
paracetamol  (EXP,ISO)
paraquat  (EXP,ISO)
perfluorohexanesulfonic acid  (EXP)
perfluorononanoic acid  (ISO)
perfluorooctanoic acid  (ISO)
phenobarbital  (ISO)
phenol  (ISO)
phenylmercury acetate  (ISO)
phorbol 13-acetate 12-myristate  (EXP)
pirinixic acid  (ISO)
potassium chromate  (ISO)
progesterone  (ISO)
pyrethrins  (ISO)
quercetin  (ISO)
raloxifene  (ISO)
resveratrol  (ISO)
rotenone  (EXP,ISO)
SB 431542  (ISO)
silicon dioxide  (ISO)
sodium arsenite  (EXP,ISO)
sulfadimethoxine  (ISO)
sulforaphane  (ISO)
T-2 toxin  (ISO)
tamoxifen  (ISO)
tetrachloromethane  (ISO)
thioacetamide  (ISO)
trichloroethene  (ISO)
trichostatin A  (ISO)
troglitazone  (ISO)
tunicamycin  (ISO)
valproic acid  (ISO)
vemurafenib  (ISO)
vinclozolin  (ISO)
zoledronic acid  (ISO)

References

References - curated
# Reference Title Reference Citation
1. MGDs mouse GO annotations MGD data from the GO Consortium
2. MGD IEA MGD IEA
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. Mouse MP Annotation Import Pipeline RGD automated import pipeline
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11239407   PMID:11485735   PMID:11714751   PMID:12244201   PMID:12477932   PMID:12515813   PMID:14610273  
PMID:15489334   PMID:16081797   PMID:16141072   PMID:16141073   PMID:16602821   PMID:16730379   PMID:18287559   PMID:18799693   PMID:21267068   PMID:21501873   PMID:21725297   PMID:21873635  
PMID:22340501   PMID:22427645   PMID:23559013   PMID:24048829   PMID:24806669   PMID:24806670   PMID:27354516   PMID:27487218   PMID:27622990   PMID:28045014   PMID:28285993   PMID:29459438  
PMID:29526794   PMID:31628183   PMID:32963272   PMID:34012073   PMID:34321999   PMID:38187761  


Genomics

Comparative Map Data
Tnfrsf21
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391743,327,446 - 43,400,079 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1743,327,446 - 43,400,080 (+)EnsemblGRCm39 Ensembl
GRCm381743,016,555 - 43,089,188 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1743,016,555 - 43,089,189 (+)EnsemblGRCm38mm10GRCm38
MGSCv371743,153,504 - 43,226,137 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361742,480,039 - 42,552,546 (+)NCBIMGSCv36mm8
Celera1746,437,745 - 46,511,566 (+)NCBICelera
Cytogenetic Map17B3NCBI
cM Map1719.69NCBI
TNFRSF21
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38647,231,532 - 47,309,905 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl647,231,532 - 47,309,905 (-)EnsemblGRCh38hg38GRCh38
GRCh37647,199,268 - 47,277,641 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36647,307,227 - 47,385,639 (-)NCBINCBI36Build 36hg18NCBI36
Build 34647,307,227 - 47,385,639NCBI
Celera648,751,647 - 48,830,057 (-)NCBICelera
Cytogenetic Map6p12.3NCBI
HuRef646,922,187 - 47,000,607 (-)NCBIHuRef
CHM1_1647,202,168 - 47,280,589 (-)NCBICHM1_1
T2T-CHM13v2.0647,068,690 - 47,147,063 (-)NCBIT2T-CHM13v2.0
Tnfrsf21
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8925,376,400 - 25,451,323 (-)NCBIGRCr8
mRatBN7.2917,879,156 - 17,954,085 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl917,879,156 - 17,954,085 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx926,464,727 - 26,539,338 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0931,539,288 - 31,613,891 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0929,829,984 - 29,904,528 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0920,546,159 - 20,621,051 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl920,546,159 - 20,621,051 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0919,419,628 - 19,494,259 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4913,587,961 - 13,666,380 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1913,587,217 - 13,769,016 (-)NCBI
Celera915,587,091 - 15,661,770 (-)NCBICelera
Cytogenetic Map9q13NCBI
Tnfrsf21
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543711,876,895 - 11,915,460 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495543711,877,051 - 11,915,220 (-)NCBIChiLan1.0ChiLan1.0
TNFRSF21
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2561,728,356 - 61,808,918 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1657,594,589 - 57,675,179 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0646,815,762 - 46,894,286 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1648,079,749 - 48,158,356 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl648,079,749 - 48,158,356 (-)Ensemblpanpan1.1panPan2
TNFRSF21
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11215,343,953 - 15,408,230 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1215,378,311 - 15,451,582 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01215,849,878 - 15,923,408 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.11215,358,307 - 15,431,830 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01215,451,469 - 15,524,837 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01215,597,718 - 15,671,239 (-)NCBIUU_Cfam_GSD_1.0
Tnfrsf21
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494650,765,997 - 50,834,940 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647613,125,042 - 13,194,232 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647613,125,269 - 13,194,205 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TNFRSF21
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl742,020,227 - 42,091,448 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1742,020,219 - 42,091,521 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2748,679,152 - 48,748,972 (-)NCBISscrofa10.2Sscrofa10.2susScr3
TNFRSF21
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11724,981,649 - 25,053,504 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1724,981,540 - 25,055,897 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604447,247,715 - 47,321,445 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tnfrsf21
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475413,567,734 - 13,634,009 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475413,567,898 - 13,633,368 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Tnfrsf21
3276 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:363
Count of miRNA genes:261
Interacting mature miRNAs:292
Transcripts:ENSMUST00000024708
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300890Bhr3_mbronchial hyperresponsiveness 3 (mouse)Not determined17397489048866091Mouse
4141215Mnic1_mmacronutrient intake, carbohydrate 1 (mouse)Not determined485475245670266Mouse
1300706Alan1_malloantigen response 1 (mouse)Not determined17485475246469702Mouse
1357789Kdnw3_mkidney weight 3 (mouse)Not determined17485475247885665Mouse
4141272Tfv1_mtotal food volume 1 (mouse)Not determined485475265637357Mouse
1301338Lmr1_mleishmaniasis resistance 1 (mouse)Not determined171008134086996400Mouse
1302028Asbb3_mautoimmune susceptibility in C57BL/6J and BALB/c 3 (mouse)Not determined171087811944878219Mouse
4141067Hbnr2_mHeligmosomoides bakeri nematode resistance 2 (mouse)Not determined1188597145886119Mouse
14747010Mancz14_mmandible centroid size 14 (mouse)171199818445998184Mouse
4142150Stheal11_msoft tissue heal 11 (mouse)Not determined171228621183361768Mouse
12904946Tammq8_mtibialis anterior muscle mass QTL 8 (mouse)171245178746451787Mouse
13524847Asrq8a_macoustic startle response 8a (mouse)171264696146646961Mouse
11081168Tir7_mtrypanosome infection response 7 (mouse)171412337248123496Mouse
1300995Fembrs4_mfemur breaking strength 4 (mouse)Not determined171506165249061760Mouse
1300914Pcir4_mperiosteal circumference 4 (mouse)Not determined171506165249061760Mouse
1302070Tbbmd7_mtotal body bone mineral density 7 (mouse)Not determined171506165249061760Mouse
1558886Lgth9_mbody length 9 (mouse)Not determined171506165249061760Mouse
1302140Wta4_mweight adult 4 (mouse)Not determined171681972150819843Mouse
1302152Skull25_mskull morphology 25 (mouse)Not determined171681972150819843Mouse
10412083Sm2_msusceptibility to Schistosoma mansoni infection 2 (mouse)Not determined171702994351030078Mouse
13452396Leusq3_mleucocytosis susceptibility QTL 3 (mouse)171746220851462345Mouse
13452399Leusq6_mleucocytosis susceptibility QTL 6 (mouse)171746220851462345Mouse
10412214Sxbq3_mSGC/Knj cross B6 QTL 3 (mouse)Not determined171746220851462345Mouse
1300535Char3_mP. chabaudi malaria resistance QTL 3 (mouse)Not determined171746220851462345Mouse
1301840Ssial4_msusceptibility to sialadenitiss 4 (mouse)Not determined171817541252178214Mouse
1301331Lbw1_mlupus NZB x NZW 1 (mouse)Not determined171841835752420983Mouse
1301056Pas2_mpulmonary adenoma susceptibility 2 (mouse)Not determined171842214152424327Mouse
15039354Nmrs36_mNAFLD-associated magnetic resonance shift 36 (mouse)171914502553145025Mouse
1301454Eae5_msusceptibility to experimental allergic encephalomyelitis 5 (mouse)Not determined172461275058612864Mouse
10412198Sst5_msusceptibility to tuberculosis 5 (mouse)Not determined172507658355712970Mouse
10412196Bbaa28_mB.burgdorferi-associated arthritis 28 (mouse)Not determined172558491443976235Mouse
10412204Bbaa29_mB.burgdorferi-associated arthritis 29 (mouse)Not determined172605118560051352Mouse
1558758Kcal2_mkilocalorie 2 (mouse)Not determined172640101252911704Mouse
1302005Loco2_mlocomotor activity 2 (mouse)Not determined172688497260885114Mouse
11075105Modc1_mmodifier of Odc1 (mouse)172771579245622654Mouse
15039348Nmrs37_mNAFLD-associated magnetic resonance shift 37 (mouse)172781520961815209Mouse
10045977Tir9_mtrypanosome infection response 9 (mouse)Not determined172787811943885114Mouse
1300703Uvbi2_mUVB induced immunosuppression 2 (mouse)Not determined172862240662622654Mouse
1300589Myaa2_mmodifier of Yaa 2 (mouse)Not determined173013255564132666Mouse
4141357Mrdq1_mmodifier of retinal degeneration QTL 1 (mouse)Not determined3098790348039703Mouse
4140955Plgr1_mplague resistance locus 1 (mouse)Not determined3103350065033630Mouse
26884379Skwq5_mskull length QTL 5, 5 week (mouse)173311897454107028Mouse
1300885Mbis4_mMycobacterium bovis-induced systemic lupus erythematosus 4 (mouse)Not determined173517581770165926Mouse
10755514Amzn2_manatomical modifier of Zfp423 2 (mouse)173596629469966424Mouse
12904951Smmq2_msoleus muscle mass QTL 2 (mouse)173678974370789743Mouse
1301474Hcbip2_mhexachlorobenzene induced porphyria 2 (mouse)Not determined173779305545622654Mouse
1300592Pcyts5_mplasmacytoma susceptibility 5 (mouse)Not determined173871288772712970Mouse
10755525Lymph2_mlymphocyte differential 2 (mouse)173880562672805626Mouse
10755534Lymph4_mlymphocyte differential 4 (mouse)173880562672805626Mouse
4141319Hmtb8_mhemostasis and thrombosis rebleeding time 8 (mouse)Not determined4053444774534623Mouse
15039324Nmrs48_mNAFLD-associated magnetic resonance shift 48 (mouse)174093918774939187Mouse
1302069Bbaa8_mB.burgdorferi-associated arthritis 8 (mouse)Not determined174305118543976235Mouse
4141478Hbnr7_mHeligmosomoides bakeri nematode resistance 7 (mouse)Not determined4305118551739122Mouse

Markers in Region
AA959878  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381743,088,945 - 43,089,055UniSTSGRCm38
MGSCv371743,225,894 - 43,226,004UniSTSGRCm37
Celera1746,511,324 - 46,511,434UniSTS
Cytogenetic Map17CUniSTS
Whitehead/MRC_RH17552.49UniSTS
RH125109  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381743,089,032 - 43,089,120UniSTSGRCm38
MGSCv371743,225,981 - 43,226,069UniSTSGRCm37
Celera1746,511,411 - 46,511,499UniSTS
Cytogenetic Map17CUniSTS


Expression


Sequence


RefSeq Acc Id: ENSMUST00000024708   ⟹   ENSMUSP00000024708
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1743,327,446 - 43,400,080 (+)Ensembl
GRCm38.p6 Ensembl1743,016,555 - 43,089,189 (+)Ensembl
RefSeq Acc Id: ENSMUST00000233482
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1743,327,459 - 43,349,619 (+)Ensembl
GRCm38.p6 Ensembl1743,016,568 - 43,038,728 (+)Ensembl
RefSeq Acc Id: NM_178589   ⟹   NP_848704
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391743,327,446 - 43,400,079 (+)NCBI
GRCm381743,016,555 - 43,089,188 (+)ENTREZGENE
MGSCv371743,153,504 - 43,226,137 (+)RGD
Celera1746,437,745 - 46,511,566 (+)RGD
cM Map17 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_848704   ⟸   NM_178589
- Peptide Label: precursor
- UniProtKB: Q91W77 (UniProtKB/Swiss-Prot),   Q543Y9 (UniProtKB/Swiss-Prot),   Q3UYG3 (UniProtKB/Swiss-Prot),   Q91XH9 (UniProtKB/Swiss-Prot),   Q9EPU5 (UniProtKB/Swiss-Prot),   Q8BZU6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000024708   ⟸   ENSMUST00000024708
Protein Domains
Death   TNFR-Cys

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9EPU5-F1-model_v2 AlphaFold Q9EPU5 1-655 view protein structure

Promoters
RGD ID:13676102
Promoter ID:EPDNEW_M22200
Type:initiation region
Name:Tnfrsf21_1
Description:Mus musculus tumor necrosis factor receptor superfamily, member21 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381743,016,585 - 43,016,645EPDNEW
RGD ID:6828812
Promoter ID:MM_KWN:23524
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day1,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_178589,   UC008COU.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361743,153,336 - 43,153,836 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2151075 AgrOrtholog
Ensembl Genes ENSMUSG00000023915 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000024708 ENTREZGENE
  ENSMUST00000024708.6 UniProtKB/Swiss-Prot
Gene3D-CATH 1.10.533.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Tumor Necrosis Factor Receptor, subunit A, domain 2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro DEATH-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Death_domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TNFR/NGFR_Cys_rich_reg UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TNFR_21 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TNFRSF21_death UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TNFRSF21_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:94185 UniProtKB/Swiss-Prot
MGD MGI:2151075 ENTREZGENE
NCBI Gene 94185 ENTREZGENE
PANTHER PTHR46921 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER 21 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Death UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TNFR_c6 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Tnfrsf21 PhenoGen
PRINTS TNFACTORR21 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE DEATH_DOMAIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TNFR_NGFR_1 UniProtKB/Swiss-Prot
  TNFR_NGFR_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART DEATH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ephrin_rec_like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TNFR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF47986 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TNF receptor-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt Q3UPV2_MOUSE UniProtKB/TrEMBL
  Q3UYG3 ENTREZGENE
  Q543Y9 ENTREZGENE
  Q8BZU6 ENTREZGENE, UniProtKB/TrEMBL
  Q91W77 ENTREZGENE
  Q91XH9 ENTREZGENE
  Q9EPU5 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary Q3UYG3 UniProtKB/Swiss-Prot
  Q543Y9 UniProtKB/Swiss-Prot
  Q91W77 UniProtKB/Swiss-Prot
  Q91XH9 UniProtKB/Swiss-Prot