Zpr1 (ZPR1 zinc finger) - Rat Genome Database

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Gene: Zpr1 (ZPR1 zinc finger) Mus musculus
Analyze
Symbol: Zpr1
Name: ZPR1 zinc finger
RGD ID: 1323504
MGI Page MGI
Description: Enables receptor tyrosine kinase binding activity; translation initiation factor binding activity; and zinc ion binding activity. Involved in several processes, including Cajal body organization; blastocyst growth; and nervous system development. Located in several cellular components, including growth cone; nuclear body; and perikaryon. Is expressed in several structures, including central nervous system; liver; spleen; testis; and urinary system. Orthologous to human ZPR1 (ZPR1 zinc finger).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AI303781; Zfp25; Zfp259; zinc finger protein 259; zinc finger protein ZPR1; Znf259; ZP
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: Gm14576   Gm15000  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39946,184,362 - 46,193,941 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl946,184,362 - 46,193,941 (+)EnsemblGRCm39 Ensembl
GRCm38946,273,064 - 46,282,643 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl946,273,064 - 46,282,643 (+)EnsemblGRCm38mm10GRCm38
MGSCv37946,081,147 - 46,090,726 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36946,024,161 - 46,032,597 (+)NCBIMGSCv36mm8
Celera943,562,072 - 43,571,685 (+)NCBICelera
Cytogenetic Map9A5.2NCBI
cM Map925.38NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
axon  (IBA,IDA)
Cajal body  (IBA,IDA,ISO,ISS)
cytoplasm  (IBA,IDA,ISO)
Gemini of coiled bodies  (IDA,ISO,ISS)
growth cone  (IDA)
neuronal cell body  (IDA)
nucleolus  (ISO,ISS)
nucleoplasm  (ISO,ISS)
nucleus  (IBA,IDA,ISO)
perikaryon  (IDA)
perinuclear region of cytoplasm  (IEA)

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Mouse brain organization revealed through direct genome-scale TF expression analysis. Gray PA, etal., Science 2004 Dec 24;306(5705):2255-7.
2. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. MGD IEA MGD IEA
5. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
6. Mouse MP Annotation Import Pipeline RGD automated import pipeline
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8650580   PMID:9763455   PMID:9852145   PMID:10349636   PMID:10885754   PMID:11042159   PMID:11076861   PMID:12477932   PMID:14610273   PMID:15489334   PMID:15767679   PMID:15782199  
PMID:16141072   PMID:16141073   PMID:16648254   PMID:17704259   PMID:18287559   PMID:19966453   PMID:21267068   PMID:21873635   PMID:22422766   PMID:22988430   PMID:28811488   PMID:29617656  
PMID:31828288   PMID:32325033   PMID:34321999  


Genomics

Comparative Map Data
Zpr1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39946,184,362 - 46,193,941 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl946,184,362 - 46,193,941 (+)EnsemblGRCm39 Ensembl
GRCm38946,273,064 - 46,282,643 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl946,273,064 - 46,282,643 (+)EnsemblGRCm38mm10GRCm38
MGSCv37946,081,147 - 46,090,726 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36946,024,161 - 46,032,597 (+)NCBIMGSCv36mm8
Celera943,562,072 - 43,571,685 (+)NCBICelera
Cytogenetic Map9A5.2NCBI
cM Map925.38NCBI
ZPR1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3811116,773,799 - 116,788,023 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl11116,773,799 - 116,788,039 (-)EnsemblGRCh38hg38GRCh38
GRCh3711116,644,515 - 116,658,739 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3611116,154,486 - 116,163,949 (-)NCBINCBI36Build 36hg18NCBI36
Build 3411116,154,486 - 116,163,949NCBI
Celera11113,804,668 - 113,814,129 (-)NCBICelera
Cytogenetic Map11q23.3NCBI
HuRef11112,581,245 - 112,590,732 (-)NCBIHuRef
CHM1_111116,533,917 - 116,543,379 (-)NCBICHM1_1
T2T-CHM13v2.011116,788,425 - 116,802,647 (-)NCBIT2T-CHM13v2.0
Zpr1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8855,461,839 - 55,471,413 (+)NCBIGRCr8
mRatBN7.2846,564,898 - 46,574,719 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl846,565,146 - 46,574,719 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx852,066,497 - 52,076,063 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0850,345,269 - 50,354,835 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0848,209,543 - 48,219,109 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0850,563,047 - 50,572,621 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl850,563,047 - 50,572,621 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0849,189,009 - 49,198,583 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4849,257,107 - 49,266,681 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera846,146,914 - 46,156,613 (+)NCBICelera
Cytogenetic Map8q22NCBI
Zpr1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541218,116,531 - 18,127,552 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541218,117,957 - 18,127,552 (-)NCBIChiLan1.0ChiLan1.0
ZPR1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v29117,479,213 - 117,489,052 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan111118,584,442 - 118,594,266 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v011111,613,940 - 111,623,539 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.111115,547,951 - 115,557,883 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl11115,547,973 - 115,557,883 (-)Ensemblpanpan1.1panPan2
ZPR1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1516,778,803 - 16,787,493 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl516,778,832 - 16,787,105 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha516,830,973 - 16,839,827 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0516,725,521 - 16,734,375 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl516,725,519 - 16,734,197 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1516,862,383 - 16,871,236 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0516,764,960 - 16,773,814 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0516,808,093 - 16,816,950 (+)NCBIUU_Cfam_GSD_1.0
Zpr1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494799,136,639 - 99,146,064 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365422,056,905 - 2,067,542 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365422,058,048 - 2,067,468 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZPR1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl944,167,423 - 44,177,435 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1944,167,422 - 44,178,137 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2949,241,411 - 49,250,617 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ZPR1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11108,144,247 - 108,153,533 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1108,144,609 - 108,153,480 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604317,895,518 - 17,904,802 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Zpr1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462478412,202,519 - 12,213,120 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462478412,202,519 - 12,212,257 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Zpr1
304 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1190
Count of miRNA genes:592
Interacting mature miRNAs:725
Transcripts:ENSMUST00000034583, ENSMUST00000114552, ENSMUST00000125239, ENSMUST00000125791, ENSMUST00000141763, ENSMUST00000143511, ENSMUST00000156440
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301782Chol11_mcholesterol 11 (mouse)Not determined92929292963293072Mouse
11532712Sluc39d_msusceptibility to lung cancer 39d (mouse)92558748559587581Mouse
12790986Pcho9_mplasma cholesterol 9 (mouse)93809957572099575Mouse
13504834Hdlq109_mHDL QTL 109 (mouse)91670964150709641Mouse
1357465Vtbt6_mvertebral trabecular bone trait 6 (mouse)Not determined91697884050978943Mouse
12790993Adq1_maortic diameter QTL 1 (mouse)91574962749749627Mouse
12790992Arlsq1_maortic root lesion size QTL 1 (mouse)93809957572099575Mouse
10043917Obq37_mobesity QTL 37 (mouse)Not determined91339117547391175Mouse
12790997Adq2_maortic diameter QTL 2 (mouse)91574962749749627Mouse
1301252Etohc3_methanol consumption 3 (mouse)Not determined93503447869034599Mouse
1357709Si5lq3_mserum IGFBP-5 level QTL 3 (mouse)Not determined93311102567111140Mouse
12791002Arlsq2_maortic root lesion size QTL 2 (mouse)93809957572099575Mouse
1301558Stheal8_msoft tissue heal 8 (mouse)Not determined94348071477480860Mouse
1301045Sluc10_msusceptibility to lung cancer 10 (mouse)Not determined92030619754306370Mouse
1357746Vtbt7_mvertebral trabecular bone trait 7 (mouse)Not determined93073991564740021Mouse
1300532Tbs2_mtuberculosis severity 2 (mouse)Not determined91236997046370114Mouse
4141591Cq4_mcholesterol QTL 4 (mouse)Not determined91541175149411890Mouse
1301435Trigq1_mtriglyceride QTL 1 (mouse)Not determined94442817478428262Mouse
1301439Morph2_mmorphine antinociception 2 (mouse)Not determined92015336254153492Mouse
4142352Lmr17_mleishmaniasis resistance 17 (mouse)Not determined92030619754306370Mouse
12904939Edlmmq8_mextensor digitorum longus muscle mass QTL 8 (mouse)92085274054852740Mouse
1301692Hts_mhypothermia sensitivity (mouse)Not determined93251117266511421Mouse
1558968Tbdr1_mbody temperature response to dietary restriction, QTL 1 (mouse)Not determined93503447869034599Mouse
1300643Pvcan2_mprotection against vaginal candidiasis 2 (mouse)Not determined91994340653943525Mouse
4141071Ath29_matherosclerosis 29 (mouse)Not determined94041959474607925Mouse
13432191Actrse4_mactivity response to saline/ethanol 4 (mouse)94370321448603195Mouse
4141323Ptnu3_mproteinuria 3 (mouse)Not determined93288970266889836Mouse
10045613Rapop7_mradiation-induced apoptosis 6 (mouse)Not determined93673624349420511Mouse
10043950Pbft5_mpercent body fat 5 (mouse)Not determined92030619754306370Mouse
11532696Sluc39c_msusceptibility to lung cancer 39c (mouse)92558748559587581Mouse
1302180Actd4_mactivity-distance traveled 4 (mouse)Not determined93243456366434857Mouse
4141447Cfmq2_mcystic fibrosis modifier QTL 2 (mouse)Not determined91541175149411890Mouse
11532695Sluc39b_msusceptibility to lung cancer 39b (mouse)92558748559587581Mouse
11532694Sluc39a_msusceptibility to lung cancer 39a (mouse)92558748559587581Mouse
13208563Bmiq8_mbody mass index QTL 8 (mouse)92491129668907282Mouse
11532693Sluc39_msusceptibility to lung cancer 39 (mouse)94064537448351476Mouse
1301421Lgth4_mbody length 4 (mouse)Not determined91541175149411890Mouse
10043867Mtbcq9_mmultiple trait body composition QTL 9 (mouse)Not determined92679642160796552Mouse
1558993Tdmq1_mtype 2 diabetes modifying QTL 1 (mouse)Not determined94041959451808670Mouse
1301972Cocrb8_mcocaine related behavior 8 (mouse)Not determined93503447869034599Mouse
10043987Stheal13_msoft tissue heal 13 (mouse)Not determined92679642160796552Mouse
1558872Ibdq1_minflammatory bowel disease QTL 1 (mouse)Not determined93397884073439255Mouse
1357637Si5lq2_mserum IGFBP-5 level QTL 2 (mouse)Not determined91541175149411890Mouse
12738449Spcq2_msperm count QTL 2 (mouse)93939988573399885Mouse
1301702Brm1_mbrachyury modifier 1 (mouse)Not determined94080504774805204Mouse
1300932Hdlq17_mHDL QTL 17 (mouse)Not determined92679642160796552Mouse
10043971Obq32_mobesity QTL 32 (mouse)Not determined93781952871819528Mouse
12880415V125Dq7_mvitamin D active form serum level QTL 7 (mouse)91601129650011296Mouse
10043847Hdlq89_mHDL QTL 89 (mouse)Not determined92929292963293072Mouse
10045639Heal28_mwound healing/regeneration 28 (mouse)Not determined94348071477480860Mouse
4141148Cq5_mcholesterol QTL 5 (mouse)Not determined93245242166452546Mouse
12880416V125Dq8_mvitamin D active form serum level QTL 8 (mouse)91601129650011296Mouse
4142042Alpq3_malcohol preference QTL 3 (mouse)Not determined93730619798701707Mouse
1301365Ap5q_malcohol preference 5 QTL (mouse)Not determined93005316464053277Mouse
1301883Skull12_mskull morphology 12 (mouse)Not determined92030619754306370Mouse
11354951Pdcc3_mplasmacytoid dentritic cell compartment 3 (mouse)91574962749749627Mouse
1301501Lmr2_mleishmaniasis resistance 2 (mouse)Not determined93694340650111140Mouse
10043878Adip20_madiposity 20 (mouse)Not determined92725119461251323Mouse

Markers in Region
BB396022  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38946,282,437 - 46,282,576UniSTSGRCm38
MGSCv37946,090,520 - 46,090,659UniSTSGRCm37
Celera943,571,479 - 43,571,618UniSTS
Cytogenetic Map9A5.2UniSTS
Whitehead/MRC_RH9500.1UniSTS
AI046360  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38946,271,278 - 46,271,382UniSTSGRCm38
MGSCv37946,079,361 - 46,079,465UniSTSGRCm37
Celera943,560,286 - 43,560,390UniSTS
Cytogenetic Map9BUniSTS
Cytogenetic Map9A5.2UniSTS
Whitehead/MRC_RH9500.1UniSTS
AI303781  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38946,281,394 - 46,281,476UniSTSGRCm38
MGSCv37946,089,477 - 46,089,559UniSTSGRCm37
Celera943,570,436 - 43,570,518UniSTS
Cytogenetic Map9A5.2UniSTS
Whitehead/MRC_RH9500.1UniSTS


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSMUST00000114552   ⟹   ENSMUSP00000110199
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl946,184,506 - 46,192,782 (+)Ensembl
GRCm38.p6 Ensembl946,273,208 - 46,281,484 (+)Ensembl
Ensembl Acc Id: ENSMUST00000125239   ⟹   ENSMUSP00000123437
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl946,184,491 - 46,187,087 (+)Ensembl
GRCm38.p6 Ensembl946,273,193 - 46,275,789 (+)Ensembl
Ensembl Acc Id: ENSMUST00000125791
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl946,186,755 - 46,187,907 (+)Ensembl
GRCm38.p6 Ensembl946,275,457 - 46,276,609 (+)Ensembl
Ensembl Acc Id: ENSMUST00000141763
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl946,184,930 - 46,188,035 (+)Ensembl
GRCm38.p6 Ensembl946,273,632 - 46,276,737 (+)Ensembl
Ensembl Acc Id: ENSMUST00000143511
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl946,187,432 - 46,188,954 (+)Ensembl
GRCm38.p6 Ensembl946,276,134 - 46,277,656 (+)Ensembl
Ensembl Acc Id: ENSMUST00000156440   ⟹   ENSMUSP00000117725
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl946,184,362 - 46,193,941 (+)Ensembl
GRCm38.p6 Ensembl946,273,064 - 46,282,643 (+)Ensembl
RefSeq Acc Id: NM_011752   ⟹   NP_035882
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39946,184,362 - 46,193,941 (+)NCBI
GRCm38946,273,064 - 46,282,643 (+)ENTREZGENE
MGSCv37946,081,147 - 46,090,726 (+)RGD
Celera943,562,072 - 43,571,685 (+)RGD
cM Map9 ENTREZGENE
Sequence:
RefSeq Acc Id: XR_003947860
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39946,184,367 - 46,192,902 (+)NCBI
GRCm38946,273,069 - 46,281,604 (+)NCBI
Sequence:
RefSeq Acc Id: NP_035882   ⟸   NM_011752
- UniProtKB: Q62384 (UniProtKB/Swiss-Prot),   Q3TY03 (UniProtKB/TrEMBL),   Q9JJA1 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSMUSP00000123437   ⟸   ENSMUST00000125239
Ensembl Acc Id: ENSMUSP00000110199   ⟸   ENSMUST00000114552
Ensembl Acc Id: ENSMUSP00000117725   ⟸   ENSMUST00000156440
Protein Domains
Zinc finger ZPR1-type

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q62384-F1-model_v2 AlphaFold Q62384 1-459 view protein structure

Promoters
RGD ID:6845350
Promoter ID:MM_KWN:57223
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000034583,   OTTMUST00000051963,   OTTMUST00000051964,   OTTMUST00000051966,   OTTMUST00000051967,   OTTMUST00000084791
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36946,080,961 - 46,081,461 (+)MPROMDB
RGD ID:6845352
Promoter ID:MM_KWN:57224
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Liver
Transcripts:OTTMUST00000051968,   OTTMUST00000051969
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36946,083,031 - 46,084,182 (+)MPROMDB
RGD ID:8669488
Promoter ID:EPDNEW_M12775
Type:initiation region
Name:Zpr1_1
Description:Mus musculus ZPR1 zinc finger , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38946,273,166 - 46,273,226EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1330262 AgrOrtholog
Ensembl Genes ENSMUSG00000032078 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000114552.4 UniProtKB/TrEMBL
  ENSMUST00000125239.9 UniProtKB/TrEMBL
  ENSMUST00000156440 ENTREZGENE
  ENSMUST00000156440.8 UniProtKB/Swiss-Prot
Gene3D-CATH 2.20.25.420 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.60.120.1040 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Znf_ZPR1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZPR1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZPR1_A/B_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZPR1_ZnF1/2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:22687 UniProtKB/Swiss-Prot
MGD MGI:1330262 ENTREZGENE
NCBI Gene 22687 ENTREZGENE
PANTHER PTHR10876 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZINC FINGER PROTEIN ZPR1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam jr-ZPR1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  zf-ZPR1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Zpr1 PhenoGen
SMART Zpr1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt F6WPJ5_MOUSE UniProtKB/TrEMBL
  F8WHU9_MOUSE UniProtKB/TrEMBL
  Q3TI08_MOUSE UniProtKB/TrEMBL
  Q3TIH8_MOUSE UniProtKB/TrEMBL
  Q3TY03 ENTREZGENE, UniProtKB/TrEMBL
  Q62384 ENTREZGENE
  Q8C8U3_MOUSE UniProtKB/TrEMBL
  Q9CUE2_MOUSE UniProtKB/TrEMBL
  Q9JJA1 ENTREZGENE, UniProtKB/TrEMBL
  ZPR1_MOUSE UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2014-04-22 Zpr1  ZPR1 zinc finger  Zfp259  zinc finger protein 259  Symbol and/or name change 5135510 APPROVED