Dlx1 (distal-less homeobox 1) - Rat Genome Database

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Gene: Dlx1 (distal-less homeobox 1) Mus musculus
Analyze
Symbol: Dlx1
Name: distal-less homeobox 1
RGD ID: 1320013
MGI Page MGI
Description: Enables DNA-binding transcription factor activity, RNA polymerase II-specific; RNA polymerase II transcription regulatory region sequence-specific DNA binding activity; and chromatin binding activity. Involved in negative regulation of photoreceptor cell differentiation; positive regulation of amacrine cell differentiation; and positive regulation of transcription by RNA polymerase II. Acts upstream of or within several processes, including forebrain development; negative regulation of Notch signaling pathway; and negative regulation of oligodendrocyte differentiation. Located in nucleus. Is expressed in several structures, including alimentary system; brain; branchial arch; genitourinary system; and sensory organ. Orthologous to human DLX1 (distal-less homeobox 1).
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: DII B; Dl; Dlx; Dlx-; Dlx-1; homeobox protein DLX-1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39271,358,457 - 71,364,325 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl271,358,457 - 71,364,325 (+)EnsemblGRCm39 Ensembl
GRCm38271,528,113 - 71,533,981 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl271,528,113 - 71,533,981 (+)EnsemblGRCm38mm10GRCm38
MGSCv37271,367,502 - 71,372,037 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36271,330,284 - 71,334,819 (+)NCBIMGSCv36mm8
Celera273,193,503 - 73,198,048 (+)NCBICelera
Cytogenetic Map2C2NCBI
cM Map242.61NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References

References - curated
# Reference Title Reference Citation
1. MGDs mouse GO annotations MGD data from the GO Consortium
2. MGD IEA MGD IEA
3. Null mutation of Dlx-2 results in abnormal morphogenesis of proximal first and second branchial arch derivatives and abnormal differentiation in the forebrain. Qiu M, etal., Genes Dev 1995 Oct 15;9(20):2523-38.
4. Mouse MP Annotation Import Pipeline RGD automated import pipeline
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:1346742   PMID:1350766   PMID:1363370   PMID:1676488   PMID:7554933   PMID:7577675   PMID:7605629   PMID:7623123   PMID:7669695   PMID:7687285   PMID:7720587   PMID:7896287  
PMID:7907794   PMID:7913821   PMID:7964557   PMID:8101169   PMID:8101484   PMID:8631154   PMID:8751373   PMID:8812481   PMID:8855272   PMID:8861101   PMID:8898217   PMID:8951061  
PMID:9006071   PMID:9187081   PMID:9247261   PMID:9256348   PMID:9334308   PMID:9347917   PMID:9389446   PMID:9415433   PMID:9428417   PMID:9449664   PMID:9570774   PMID:9636075  
PMID:9753686   PMID:9876181   PMID:9883721   PMID:10021340   PMID:10021349   PMID:10098408   PMID:10349636   PMID:10433909   PMID:10516593   PMID:10556054   PMID:10557207   PMID:10586042  
PMID:10629112   PMID:10632600   PMID:10640277   PMID:10773441   PMID:11003836   PMID:11042159   PMID:11050125   PMID:11060228   PMID:11069141   PMID:11076861   PMID:11124115   PMID:11152634  
PMID:11161479   PMID:11163262   PMID:11180832   PMID:11217851   PMID:11358480   PMID:11486090   PMID:11493561   PMID:11719201   PMID:11782417   PMID:11825874   PMID:12036513   PMID:12118260  
PMID:12379852   PMID:12397111   PMID:12421703   PMID:12434331   PMID:12461181   PMID:12466851   PMID:12477932   PMID:12489206   PMID:12514106   PMID:12514213   PMID:12533617   PMID:12571103  
PMID:12588849   PMID:12644247   PMID:12670995   PMID:12722102   PMID:12724837   PMID:12752768   PMID:12799141   PMID:12819125   PMID:12895419   PMID:12948657   PMID:14681479   PMID:14769946  
PMID:14973295   PMID:15028753   PMID:15053981   PMID:15147765   PMID:15201223   PMID:15229646   PMID:15306564   PMID:15376329   PMID:15385160   PMID:15489334   PMID:15590934   PMID:15604100  
PMID:15618518   PMID:15634701   PMID:15647317   PMID:15682394   PMID:15733084   PMID:15733660   PMID:15736266   PMID:15743757   PMID:15745951   PMID:15878992   PMID:15882093   PMID:15917450  
PMID:15936012   PMID:16007083   PMID:16038893   PMID:16141072   PMID:16141073   PMID:16540508   PMID:16602821   PMID:16632068   PMID:16632597   PMID:16766700   PMID:16766712   PMID:16971467  
PMID:17164413   PMID:17182777   PMID:17259176   PMID:17356169   PMID:17376983   PMID:17409112   PMID:17462911   PMID:17470284   PMID:17494687   PMID:17507568   PMID:17582329   PMID:17596436  
PMID:17678855   PMID:18054858   PMID:18086710   PMID:18280462   PMID:18287559   PMID:18326838   PMID:18367606   PMID:18562676   PMID:18664585   PMID:18697905   PMID:18923043   PMID:19026749  
PMID:19030180   PMID:19121383   PMID:19235731   PMID:19386638   PMID:19549840   PMID:19638972   PMID:20051123   PMID:20083553   PMID:20096683   PMID:20181579   PMID:20211142   PMID:20392955  
PMID:20436479   PMID:20436929   PMID:20501333   PMID:20510229   PMID:20816794   PMID:21194568   PMID:21220099   PMID:21237142   PMID:21267068   PMID:21325686   PMID:21368052   PMID:21435555  
PMID:21452241   PMID:21471366   PMID:21525287   PMID:21552538   PMID:21658586   PMID:21666125   PMID:21873635   PMID:21875655   PMID:21943598   PMID:22376909   PMID:22699903   PMID:22753490  
PMID:22832659   PMID:22906231   PMID:22920256   PMID:22972697   PMID:22991444   PMID:23042297   PMID:23349620   PMID:23415800   PMID:23826333   PMID:23863482   PMID:24089468   PMID:24148613  
PMID:24154525   PMID:24155296   PMID:24157949   PMID:24236816   PMID:24344303   PMID:24403153   PMID:24507192   PMID:24785830   PMID:24843006   PMID:24952961   PMID:25071457   PMID:25467980  
PMID:25512300   PMID:26138476   PMID:26166575   PMID:26387942   PMID:26449264   PMID:26620267   PMID:26671461   PMID:26779909   PMID:26795843   PMID:27349434   PMID:27362800   PMID:27402841  
PMID:27578785   PMID:28289129   PMID:28356311   PMID:28685891   PMID:28694260   PMID:28784160   PMID:28821666   PMID:29028947   PMID:29031500   PMID:29140246   PMID:29229773   PMID:29513653  
PMID:29795232   PMID:29967281   PMID:30017396   PMID:30146317   PMID:30361413   PMID:30424580   PMID:30635555   PMID:30778149   PMID:30796806   PMID:31340933   PMID:31420539   PMID:31427537  
PMID:31433982   PMID:31491374   PMID:31872525   PMID:32017713   PMID:32170006   PMID:32253239   PMID:32420617   PMID:32553154   PMID:32737167   PMID:32857879   PMID:32913205   PMID:33154347  
PMID:33199446   PMID:33431871   PMID:33462220   PMID:33479483   PMID:33593819   PMID:33600763   PMID:33711282   PMID:33821423   PMID:34248495   PMID:34321999   PMID:34564702   PMID:34671237  
PMID:34716275   PMID:35156680   PMID:35377797   PMID:35695185   PMID:36064547   PMID:36067211   PMID:36213234   PMID:37566909   PMID:38934416   PMID:39280263   PMID:39569362  


Genomics

Comparative Map Data
Dlx1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39271,358,457 - 71,364,325 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl271,358,457 - 71,364,325 (+)EnsemblGRCm39 Ensembl
GRCm38271,528,113 - 71,533,981 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl271,528,113 - 71,533,981 (+)EnsemblGRCm38mm10GRCm38
MGSCv37271,367,502 - 71,372,037 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36271,330,284 - 71,334,819 (+)NCBIMGSCv36mm8
Celera273,193,503 - 73,198,048 (+)NCBICelera
Cytogenetic Map2C2NCBI
cM Map242.61NCBI
DLX1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382172,085,507 - 172,089,674 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2172,084,740 - 172,089,677 (+)EnsemblGRCh38hg38GRCh38
GRCh372172,950,235 - 172,954,402 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362172,658,454 - 172,662,648 (+)NCBINCBI36Build 36hg18NCBI36
Celera2166,566,309 - 166,570,503 (+)NCBICelera
Cytogenetic Map2q31.1NCBI
HuRef2164,830,459 - 164,834,653 (+)NCBIHuRef
CHM1_12172,957,684 - 172,961,878 (+)NCBICHM1_1
T2T-CHM13v2.02172,570,383 - 172,575,917 (+)NCBIT2T-CHM13v2.0
Dlx1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8376,763,864 - 76,768,454 (+)NCBIGRCr8
mRatBN7.2356,356,190 - 56,360,780 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl356,356,190 - 56,360,780 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx359,754,121 - 59,758,700 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0368,337,729 - 68,342,308 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0366,099,889 - 66,104,437 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0358,164,931 - 58,169,521 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl358,164,931 - 58,169,521 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0364,650,292 - 64,654,882 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4353,837,052 - 53,841,642 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1353,733,423 - 53,738,014 (+)NCBI
Celera355,903,832 - 55,908,422 (+)NCBICelera
Cytogenetic Map3q23NCBI
Dlx1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554492,920,478 - 2,924,667 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554492,920,705 - 2,924,667 (-)NCBIChiLan1.0ChiLan1.0
DLX1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21374,768,913 - 74,773,852 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B74,784,291 - 74,788,828 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B59,382,156 - 59,387,100 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B176,839,361 - 176,843,909 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B176,839,721 - 176,843,909 (+)Ensemblpanpan1.1panPan2
DLX1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13616,485,158 - 16,489,397 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3616,484,859 - 16,487,886 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3616,493,520 - 16,498,111 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03616,605,670 - 16,610,243 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3616,605,155 - 16,610,240 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13616,693,224 - 16,697,802 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03616,693,589 - 16,698,176 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03616,797,500 - 16,802,082 (+)NCBIUU_Cfam_GSD_1.0
Dlx1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303133,693,510 - 133,698,405 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365092,248,181 - 2,250,991 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365092,248,181 - 2,250,991 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DLX1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1578,185,790 - 78,191,226 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11578,186,667 - 78,191,788 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21587,613,190 - 87,617,605 (+)NCBISscrofa10.2Sscrofa10.2susScr3
DLX1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11057,586,452 - 57,599,071 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1057,590,838 - 57,595,266 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666040141,953,127 - 141,958,074 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dlx1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247879,514,573 - 9,519,724 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247879,514,170 - 9,519,309 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Dlx1
216 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2453
Count of miRNA genes:796
Interacting mature miRNAs:1046
Transcripts:ENSMUST00000037119, ENSMUST00000126400, ENSMUST00000145088, ENSMUST00000145444, ENSMUST00000152711, ENSMUST00000172629
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13464141Hbbcq3_mhemoglobin concentration QTL 3 (mouse)25244801986448136Mouse
13824983Vclq1_mcurvilinear velocity QTL 1 (mouse)261830344136841920Mouse
1301402Ap2q_malcohol preference 2 QTL (mouse)Not determined24352061277520756Mouse
1300761Lgth1_mbody length 1 (mouse)Not determined25170327685703425Mouse
4141236Hbnr5_mHeligmosomoides bakeri nematode resistance 5 (mouse)Not determined31214567105143570Mouse
1302174Dssc2_mdextran sodium sulfate induced colitis QTL2 (mouse)Not determined224224632148700377Mouse
1301405Etohr_methanol response acute (mouse)Not determined26300595497006113Mouse
1301660Iba1_minduction of brown adipocytes 1 (mouse)Not determined267647887101648142Mouse
1558915W3q1_mweight 3 weeks QTL 1 (mouse)Not determined220897778118894840Mouse
1300875Taste1_mtaste-saccharin preference 1 (mouse)Not determined25092317584923278Mouse
1301769Orgwq2_morgan weight QTL 2 (mouse)Not determined2388712693421651Mouse
1357454Kidq1_mkidney weight QTL 1 (mouse)Not determined220897778118894840Mouse
1357577Trmq3_mT cell ratio modifier QTL 3 (mouse)Not determined260520612119355518Mouse
1558966W10q9_mweight 10 weeks QTL 9 (mouse)Not determined220897778118894840Mouse
4141854T2dm2sa_mtype 2 diabetes mellitus 2 in SMXA RI mice (mouse)Not determined229307947148374934Mouse
1300662Etohila_methanol induced locomotor activity (mouse)Not determined26300595497006113Mouse
1300788Cia2_mcollagen induced arthritis QTL 2 (mouse)Not determined24352061277520756Mouse
10053681Lith24_mlithogenic gene 24 (mouse)Not determined26300595497006113Mouse
1301048Actre2_mactivity response to ethanol 2 (mouse)Not determined26300595497006113Mouse
1300671Cia4_mcollagen induced arthritis QTL 4 (mouse)Not determined24352061277520756Mouse
1357881Estoq1_membryo survival total QTL 1 (mouse)Not determined220897778118894840Mouse
5491197Mobq5_mmultigenic obesity QTL 5 (mouse)Not determined265269746162518926Mouse
1301948Elsgp3_melevated serum gp70 3 (mouse)Not determined268724269102724407Mouse
1301411Pitm1_mprion incubation time 1 (mouse)Not determined24352061277520756Mouse
4141069Pbwg1.5_mpostnatal body weight growth 1.5 (mouse)Not determined4352061277520756Mouse
1558820Moo1_mmodifier of Odc1 (mouse)Not determined174826974682269934Mouse
13432178Actres2_mactivity response to ethanol/saline 2 (mouse)26069228774092287Mouse
12738429Lfibq18_mliver fibrosis QTL 18 (mouse)25791999191919991Mouse
39128209Lwq14_mliver weight QTL 14 (mouse)220897778118894840Mouse
1558738W6q1_mweight 6 weeks QTL 1 (mouse)Not determined220897778118894840Mouse
11038703Ltpr1_mLeishmania tropica response 1 (mouse)23997166573971811Mouse
1300568Hdl1_mhigh density lipoprotein (HDL) level 1 (mouse)Not determined24826974682269934Mouse
1559001Eae33_mexperimental allergic encephalomyelitis susceptibility 33 (mouse)Not determined23599167971609412Mouse
1301059Hrtfm1_mheart failure modifier 1 (mouse)Not determined26759194074964933Mouse
1301703Bomd3_mbone mineral density 3 (mouse)Not determined26300595497006113Mouse
1301747Eae21_mexperimental allergic encephalomyelitis 21 (mouse)Not determined24826974682269934Mouse
1301235Alcw4_malcohol withdrawal 4 (mouse)Not determined24826974682269934Mouse
4141406Alpq2_malcohol preference QTL 2 (mouse)Not determined25752411791524288Mouse
10755526Lymph1_mlymphocyte differential 1 (mouse)25081931484819314Mouse
13463471Hctq6_mhematocrit QTL 6 (mouse)25244801986448136Mouse
1301873Hsl1_mhyperoxia susceptibility locus 1 (mouse)Not determined26357015497570301Mouse
1558899Egq1_mearly growth QTL 1 (mouse)Not determined220897778118894840Mouse
1357681Hrtq1_mheart weight QTL 1 (mouse)Not determined220897778118894840Mouse
1301109Dntcs2_mdental caries susceptibility 2 (mouse)Not determined240885493114910165Mouse
1357436Splq1_mspleen weight QTL 1 (mouse)Not determined220897778118894840Mouse
10755532Lymph5_mlymphocyte differential 5 (mouse)24419901778199017Mouse
1301882Etohc2_methanol consumption 2 (mouse)Not determined268724269102724407Mouse
11532740Pbwg1.10_mpostnatal body weight growth 1.10 (mouse)24813241282132495Mouse
1300577Capsq1_mcapsaicin sensitivity related QTL 1 (mouse)Not determined22760206084013384Mouse
1301344Lith1_mlithogenic gene 1 (mouse)Not determined245347635145312647Mouse
13463482Mchq17_mmean corpuscular hemoglobin QTL 17 (mouse)267647887101648142Mouse
1301480Pbwg1_mpostnatal body weight growth 1 (mouse)Not determined24182071975820843Mouse
10044002Hdl7_mHDL level 7 (mouse)Not determined26300595497006113Mouse

Markers in Region
Dlx1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38271,533,506 - 71,533,844UniSTSGRCm38
MGSCv37271,371,563 - 71,371,901UniSTSGRCm37
Celera273,197,574 - 73,197,912UniSTS
Cytogenetic Map2C2UniSTS
cM Map244.0UniSTS
Dlx1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map2C2UniSTS


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSMUST00000037119   ⟹   ENSMUSP00000042413
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl271,358,457 - 71,364,324 (+)Ensembl
GRCm38.p6 Ensembl271,528,113 - 71,533,980 (+)Ensembl
Ensembl Acc Id: ENSMUST00000126400   ⟹   ENSMUSP00000133592
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl271,359,027 - 71,360,409 (+)Ensembl
GRCm38.p6 Ensembl271,528,683 - 71,530,065 (+)Ensembl
Ensembl Acc Id: ENSMUST00000145088
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl271,360,291 - 71,364,325 (+)Ensembl
GRCm38.p6 Ensembl271,529,947 - 71,533,981 (+)Ensembl
Ensembl Acc Id: ENSMUST00000145444   ⟹   ENSMUSP00000134713
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl271,360,197 - 71,362,863 (+)Ensembl
GRCm38.p6 Ensembl271,529,853 - 71,532,519 (+)Ensembl
Ensembl Acc Id: ENSMUST00000152711   ⟹   ENSMUSP00000133288
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl271,359,445 - 71,360,575 (+)Ensembl
GRCm38.p6 Ensembl271,529,101 - 71,530,231 (+)Ensembl
Ensembl Acc Id: ENSMUST00000172629
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl271,361,124 - 71,363,033 (+)Ensembl
GRCm38.p6 Ensembl271,530,780 - 71,532,689 (+)Ensembl
RefSeq Acc Id: NM_001416985   ⟹   NP_001403914
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39271,359,449 - 71,364,325 (+)NCBI
RefSeq Acc Id: NM_001416986   ⟹   NP_001403915
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39271,359,449 - 71,364,325 (+)NCBI
RefSeq Acc Id: NM_001416987   ⟹   NP_001403916
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39271,359,449 - 71,364,325 (+)NCBI
RefSeq Acc Id: NM_010053   ⟹   NP_034183
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39271,359,898 - 71,364,325 (+)NCBI
GRCm38271,529,445 - 71,533,981 (+)NCBI
MGSCv37271,367,502 - 71,372,037 (+)RGD
Celera273,193,503 - 73,198,048 (+)RGD
cM Map2 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006498672   ⟹   XP_006498735
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39271,358,457 - 71,364,325 (+)NCBI
GRCm38271,528,113 - 71,533,981 (+)NCBI
Sequence:
RefSeq Acc Id: NP_034183   ⟸   NM_010053
- UniProtKB: Q64317 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006498735   ⟸   XM_006498672
- Peptide Label: isoform X1
- UniProtKB: Q64317 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSMUSP00000134713   ⟸   ENSMUST00000145444
Ensembl Acc Id: ENSMUSP00000133288   ⟸   ENSMUST00000152711
Ensembl Acc Id: ENSMUSP00000133592   ⟸   ENSMUST00000126400
Ensembl Acc Id: ENSMUSP00000042413   ⟸   ENSMUST00000037119
RefSeq Acc Id: NP_001403914   ⟸   NM_001416985
- UniProtKB: Q64317 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001403916   ⟸   NM_001416987
- UniProtKB: Q64317 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001403915   ⟸   NM_001416986
- UniProtKB: Q64317 (UniProtKB/Swiss-Prot)
Protein Domains
Homeobox

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q64317-F1-model_v2 AlphaFold Q64317 1-255 view protein structure

Promoters
RGD ID:6831174
Promoter ID:MM_KWN:29637
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Kidney,   Lung,   MEF_B4,   MEF_B6
Transcripts:OTTMUST00000031898,   OTTMUST00000031899,   OTTMUST00000031901,   OTTMUST00000031902,   UC008KAV.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36271,367,016 - 71,367,957 (+)MPROMDB
RGD ID:6877578
Promoter ID:EPDNEW_M2239
Type:multiple initiation site
Name:Dlx1_1
Description:Mus musculus distal-less homeobox 1 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38271,529,823 - 71,529,883EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:94901 AgrOrtholog
Ensembl Genes ENSMUSG00000041911 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000037119 ENTREZGENE
  ENSMUST00000037119.4 UniProtKB/Swiss-Prot
  ENSMUST00000126400.2 UniProtKB/TrEMBL
  ENSMUST00000145444.2 UniProtKB/TrEMBL
  ENSMUST00000152711.2 UniProtKB/TrEMBL
Gene3D-CATH Homeodomain-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Distal-less_Homeobox_TF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Homeobox-like_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Homeobox_CS UniProtKB/Swiss-Prot
  Homeobox_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Homeobox_metazoa UniProtKB/Swiss-Prot
  HTH_motif UniProtKB/Swiss-Prot
KEGG Report mmu:13390 UniProtKB/Swiss-Prot
MGD MGI:94901 ENTREZGENE
NCBI Gene 13390 ENTREZGENE
PANTHER HOMEOBOX PROTEIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HOMEOBOX PROTEIN DLX-1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Homeodomain UniProtKB/Swiss-Prot
PhenoGen Dlx1 PhenoGen
PRINTS HOMEOBOX UniProtKB/Swiss-Prot
  HTHREPRESSR UniProtKB/Swiss-Prot
PROSITE HOMEOBOX_1 UniProtKB/Swiss-Prot
  HOMEOBOX_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART HOX UniProtKB/Swiss-Prot
Superfamily-SCOP SSF46689 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt DLX1_MOUSE UniProtKB/Swiss-Prot
  G3UX87_MOUSE UniProtKB/TrEMBL
  G3V009_MOUSE UniProtKB/TrEMBL
  G3XA72_MOUSE UniProtKB/TrEMBL
  Q3UUK6_MOUSE UniProtKB/TrEMBL
  Q64317 ENTREZGENE
  Q8CCN8_MOUSE UniProtKB/TrEMBL