Hap1 (huntingtin-associated protein 1)

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Gene: Hap1 (huntingtin-associated protein 1) Mus musculus

Analyze

Symbol:

Hap1

Name:

huntingtin-associated protein 1

RGD ID:

68455

MGI Page

MGI

Description:

Is expressed in several structures, including alimentary system; genitourinary system; nervous system; respiratory system; and sensory organ. Used to study endogenous depression. Human ortholog(s) of this gene implicated in Huntington's disease. Orthologous to human HAP1 (huntingtin associated protein 1).

Type:

protein-coding

RefSeq Status:

REVIEWED

Also known as:

HAP; HAP-1; MGC31449

RGD Orthologs

Human

Rat

Bonobo

Dog

Squirrel

Pig

Green Monkey

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	HAP1 (huntingtin associated protein 1)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):	Hap1 (huntingtin-associated protein 1)	HGNC	Treefam, EggNOG, NCBI, OMA, HomoloGene, Inparanoid, Panther, OrthoDB, Ensembl
Pan paniscus (bonobo/pygmy chimpanzee):	HAP1 (huntingtin associated protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	HAP1 (huntingtin associated protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Hap1 (huntingtin associated protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	HAP1 (huntingtin associated protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (African green monkey):	HAP1 (huntingtin associated protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Hap1 (huntingtin-associated protein 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|TreeFam)
Homo sapiens (human):	HAP1 (huntingtin associated protein 1)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|TreeFam)
Danio rerio (zebrafish):	si:dkey-28e7.3	Alliance	DIOPT (PANTHER\|PhylomeDB\|TreeFam)
Caenorhabditis elegans (roundworm):	trak-1	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|OrthoInspector\|PANTHER\|TreeFam)
Drosophila melanogaster (fruit fly):	milt	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER\|TreeFam)

Latest Assembly:

GRCm38 - Mouse Genome Assembly GRCm38

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	100,238,153 - 100,247,808 (-)	NCBI	GRCm39		mm39
GRCm39 Ensembl	11	100,238,153 - 100,246,954 (-)	Ensembl
GRCm38	11	100,347,327 - 100,356,982 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	100,347,327 - 100,356,128 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	100,208,641 - 100,217,455 (-)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	11	100,163,417 - 100,172,177 (-)	NCBI			mm8
Celera	11	110,964,725 - 110,973,537 (-)	NCBI		Celera
Cytogenetic Map	11	D	NCBI
cM Map	11	63.47	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Dehydration (IMP)

endogenous depression (IEA)

Huntington's disease (IDA,IEP,ISO)

nutrition disease (IMP)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (EXP)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2-butoxyethanol (EXP)

3,3',4,4',5-pentachlorobiphenyl (ISO)

6-propyl-2-thiouracil (ISO)

acetamide (ISO)

ammonium chloride (ISO)

atrazine (ISO)

benzo[a]pyrene (EXP,ISO)

benzo[b]fluoranthene (EXP)

bis(2-chloroethyl) sulfide (EXP)

bisphenol A (ISO)

cannabidiol (EXP)

cannabigerol (EXP)

carbon nanotube (EXP)

choline (EXP)

cisplatin (ISO)

cobalt dichloride (ISO)

copper atom (ISO)

copper(0) (ISO)

diethylstilbestrol (ISO)

diuron (ISO)

doxorubicin (ISO)

endosulfan (ISO)

ethanol (EXP)

fenvalerate (EXP)

folic acid (EXP,ISO)

furan (ISO)

isoprenaline (EXP)

ketamine (ISO)

L-methionine (EXP)

lead diacetate (ISO)

lead(0) (ISO)

lead(2+) (ISO)

lipopolysaccharide (EXP)

methoxychlor (ISO)

paracetamol (EXP,ISO)

pentane-2,3-dione (ISO)

silicon dioxide (EXP)

sodium arsenite (ISO)

titanium dioxide (EXP)

urethane (ISO)

valproic acid (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

anterograde axonal transport (IMP,ISO)

anterograde axonal transport of mitochondrion (IBA)

autophagy (IEA)

cell projection organization (IEA)

cellular response to growth factor stimulus (ISO)

cerebellum development (IMP)

exocytosis (IEA)

hypothalamus cell differentiation (IMP)

mitochondrion distribution (IBA)

negative regulation of amyloid-beta formation (ISO)

neurogenesis (IBA,IMP)

neuron projection development (ISO)

neurotrophin TRK receptor signaling pathway (IBA,IMP)

positive regulation of epidermal growth factor receptor signaling pathway (ISO)

positive regulation of inclusion body assembly (ISO)

positive regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity (IMP,ISO)

positive regulation of neurogenesis (IMP)

positive regulation of neuron projection development (ISO)

positive regulation of neurotrophin production (ISO)

positive regulation of non-motile cilium assembly (IMP)

positive regulation of synaptic transmission, GABAergic (ISO)

protein localization (ISO)

protein targeting (IBA)

protein transport (IEA)

regulation of exocytosis (IMP)

regulation of organelle transport along microtubule (IMP)

regulation of postsynaptic neurotransmitter receptor internalization (ISO)

retrograde axonal transport (ISO)

vesicle transport along microtubule (IBA,IMP)

Cellular Component

autophagosome (IDA)

axon terminus (ISO)

cell junction (IEA)

cell projection (IEA)

centriole (IDA)

centrosome (IDA)

cytoplasm (ISO)

cytoplasmic vesicle (IBA,IDA)

cytoskeleton (IEA)

cytosol (ISO)

dendrite (IBA,ISO)

endoplasmic reticulum (IEA)

endosome (IEA)

GABA-ergic synapse (ISO)

growth cone (ISO)

inclusion body (ISO)

lysosome (IEA)

mitochondrion (IBA)

neuron projection (ISO)

nucleolus (ISO)

nucleus (IEA)

perinuclear region of cytoplasm (ISO)

postsynaptic cytosol (ISO)

presynaptic cytosol (ISO)

synapse (IEA)

Molecular Function

brain-derived neurotrophic factor binding (ISO)

identical protein binding (ISO)

ion channel binding (ISO)

myosin binding (IBA)

protein binding (IPI,ISO)

protein domain specific binding (ISO)

signaling receptor binding (IBA,ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

Huntington's disease pathway (IEA)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

abnormal cerebral cortex morphology (IAGP)

abnormal eating behavior (IAGP)

abnormal embryo size (IEA)

abnormal hypothalamus morphology (IAGP)

abnormal motor coordination/balance (IAGP)

abnormal neurite morphology (IAGP)

abnormal neuron proliferation (IAGP)

abnormal paraventricular hypothalamic nucleus morphology (IAGP)

abnormal suckling behavior (IAGP)

abnormal ventromedial hypothalamic nucleus morphology (IAGP)

abnormal vesicle-mediated transport (IAGP)

absent gastric milk in neonates (IAGP)

absent neural folds (IAGP)

absent somites (IAGP)

anhedonia (IAGP)

decreased body size (IAGP)

decreased body weight (IAGP)

decreased brain size (IAGP)

decreased brain weight (IAGP)

decreased circulating leptin level (IAGP)

decreased coping response (IAGP)

decreased embryo size (IAGP)

decreased food intake (IAGP)

dehydration (IAGP)

dry skin (IAGP)

hypoactivity (IAGP)

impaired neuron differentiation (IAGP)

loose skin (IAGP)

neurodegeneration (IAGP)

pallor (IAGP)

postnatal growth retardation (IAGP)

postnatal lethality, complete penetrance (IAGP)

postnatal lethality, incomplete penetrance (IAGP)

preweaning lethality, complete penetrance (IEA)

slow postnatal weight gain (IAGP)

thin cerebral cortex (IAGP)

References

References - curated


1.	Chan EY, etal., Hum Mol Genet 2002 Apr 15;11(8):945-59.
2.	Czeredys M, etal., Front Mol Neurosci. 2013 Nov 25;6:42. doi: 10.3389/fnmol.2013.00042. eCollection 2013.
3.	Karadima G, etal., Parkinsonism Relat Disord. 2012 Nov;18(9):1027-8. doi: 10.1016/j.parkreldis.2012.05.020. Epub 2012 Jun 12.
4.	Metzger S, etal., Hum Mol Genet. 2008 Apr 15;17(8):1137-46. doi: 10.1093/hmg/ddn003. Epub 2008 Jan 11.
5.	MGD and Homologene mouse data transfer
6.	MGD data from the GO Consortium
7.	MGD IEA
8.	Pershouse M, etal., Genomics 2000 Oct 1;69(1):139-42.
9.	Pipeline to import KEGG annotations from KEGG into RGD
10.	RGD automated import pipeline
11.	RGD automated import pipeline for gene-chemical interactions
12.	Taherzadeh-Fard E, etal., Neurogenetics. 2010 Oct;11(4):435-9. doi: 10.1007/s10048-010-0248-3. Epub 2010 May 30.
13.	Vital M, etal., Int J Neurosci. 2015 May 22:1-17.
14.	Yuen EY, etal., Neurobiol Dis. 2012 May;46(2):497-502. doi: 10.1016/j.nbd.2012.02.015. Epub 2012 Feb 28.

Additional References at PubMed

PMID:9502734	PMID:9599014	PMID:9657855	PMID:9888310	PMID:10087300	PMID:10349636	PMID:10713390	PMID:10974549	PMID:11042159	PMID:11076861	PMID:11217851	PMID:12466851
PMID:12477932	PMID:12890790	PMID:14681479	PMID:15242649	PMID:15379999	PMID:15489334	PMID:15496430	PMID:15548548	PMID:15782199	PMID:16141072	PMID:16141073	PMID:16339760
PMID:16602821	PMID:16604089	PMID:17166838	PMID:17868456	PMID:18554416	PMID:18636121	PMID:18799476	PMID:19996106	PMID:20304926	PMID:21146532	PMID:21267068	PMID:21357693
PMID:21544547	PMID:21677750	PMID:21873635	PMID:21985783	PMID:22442722	PMID:22731248	PMID:23532844	PMID:24227713	PMID:24355921	PMID:24366265	PMID:24453320	PMID:24487590
PMID:24893171	PMID:24952961	PMID:25671650	PMID:25686248	PMID:25875952	PMID:27315547	PMID:27624941	PMID:28083816	PMID:28137862	PMID:28190767	PMID:28259758	PMID:31445164
PMID:32581705	PMID:32747555

Genomics

Comparative Map Data

Hap1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	100,238,153 - 100,247,808 (-)	NCBI	GRCm39		mm39
GRCm39 Ensembl	11	100,238,153 - 100,246,954 (-)	Ensembl
GRCm38	11	100,347,327 - 100,356,982 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	100,347,327 - 100,356,128 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	100,208,641 - 100,217,455 (-)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	11	100,163,417 - 100,172,177 (-)	NCBI			mm8
Celera	11	110,964,725 - 110,973,537 (-)	NCBI		Celera
Cytogenetic Map	11	D	NCBI
cM Map	11	63.47	NCBI

HAP1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38.p13 Ensembl	17	41,717,742 - 41,734,644 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh38	17	41,717,739 - 41,734,646 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh37	17	39,873,991 - 39,890,898 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	37,132,417 - 37,144,424 (-)	NCBI	NCBI36		hg18	NCBI36
Build 34	17	37,132,417 - 37,144,422	NCBI
Celera	17	36,530,004 - 36,542,110 (-)	NCBI
Cytogenetic Map	17	q21.2	NCBI
HuRef	17	35,641,052 - 35,653,084 (-)	NCBI		HuRef
CHM1_1	17	40,114,361 - 40,126,487 (-)	NCBI		CHM1_1

Hap1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	10	85,277,890 - 85,286,126 (-)	NCBI
Rnor_6.0 Ensembl	10	88,257,976 - 88,266,210 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_6.0	10	88,257,975 - 88,266,210 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_5.0	10	88,051,219 - 88,059,478 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	89,285,396 - 89,293,631 (-)	NCBI	RGSC3.4		rn4	RGSC3.4
RGSC_v3.1	10	89,299,766 - 89,308,001 (-)	NCBI
Celera	10	83,995,991 - 84,004,228 (-)	NCBI		Celera
Cytogenetic Map	10	q31	NCBI

HAP1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	17	15,797,949 - 15,810,299 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	17	15,797,949 - 15,810,299 (+)	Ensembl	panpan1.1		panPan2
Mhudiblu_PPA_v0	17	15,578,658 - 15,596,313 (+)	NCBI	Mhudiblu_PPA_v0		panPan3

HAP1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1 Ensembl	9	21,065,846 - 21,072,991 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
CanFam3.1	9	21,065,770 - 21,074,462 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1

Hap1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
SpeTri2.0	NW_004936490	16,645,116 - 16,652,310 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

HAP1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	20,939,554 - 20,950,051 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	12	20,938,463 - 20,950,053 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	12	21,126,539 - 21,137,053 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

HAP1
(Chlorocebus sabaeus - African green monkey)

Vervet Assembly	Chr	Position (strand)	Source	Genome Browsers
Vervet Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	64,515,013 - 64,524,270 (+)	NCBI

Position Markers

Hap1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
MGSCv37	11	100,219,597 - 100,219,888	UniSTS	GRCm37
MGSCv37	11	100,210,255 - 100,210,374	UniSTS	GRCm37
MGSCv37	11	100,209,101 - 100,209,407	UniSTS	GRCm37
Celera	11	110,975,686 - 110,975,969	UniSTS
Celera	11	110,965,184 - 110,965,490	UniSTS
Celera	11	110,966,338 - 110,966,457	UniSTS
Cytogenetic Map	11	D	UniSTS
cM Map	11	60.0	UniSTS
cM Map	11	60.0	UniSTS
cM Map	11	60.0	UniSTS

UniSTS:236732

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	11	100,347,973 - 100,348,082	UniSTS	GRCm38
MGSCv37	11	100,209,287 - 100,209,396	UniSTS	GRCm37
Celera	11	110,965,370 - 110,965,479	UniSTS
Cytogenetic Map	11	D	UniSTS
cM Map	11	60.0	UniSTS

AJ003128

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	11	100,348,923 - 100,349,060	UniSTS	GRCm38
MGSCv37	11	100,210,237 - 100,210,374	UniSTS	GRCm37
Celera	11	110,966,320 - 110,966,457	UniSTS
Cytogenetic Map	11	D	UniSTS
cM Map	11	60.0	UniSTS
Whitehead/MRC_RH	11	1334.91	UniSTS

Hap1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	11	100,348,941 - 100,349,060	UniSTS	GRCm38
MGSCv37	11	100,210,255 - 100,210,374	UniSTS	GRCm37
Celera	11	110,966,338 - 110,966,457	UniSTS
Cytogenetic Map	11	D	UniSTS

Hap1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	11	100,347,787 - 100,348,093	UniSTS	GRCm38
MGSCv37	11	100,209,101 - 100,209,407	UniSTS	GRCm37
Celera	11	110,965,184 - 110,965,490	UniSTS
Cytogenetic Map	11	D	UniSTS
cM Map	11	60.0	UniSTS

Hap1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	11	100,358,283 - 100,358,574	UniSTS	GRCm38
MGSCv37	11	100,219,597 - 100,219,888	UniSTS	GRCm37
Celera	11	110,975,686 - 110,975,969	UniSTS
Cytogenetic Map	11	D	UniSTS
cM Map	11	60.0	UniSTS

QTLs in Region (GRCm38)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1357859	Lvrq7_m	liver weight QTL 7 (mouse)			Not determined		11	12318637	118131898	Mouse
39128214	Lwq20_m	liver weight QTL 20 (mouse)					11	12318637	118131898	Mouse
4141367	Inf1_m	acute ozone induced inflammation (mouse)			Not determined			44739211	113167183	Mouse
4142121	Tmc1m2_m	Tmc1 modifier 2 (mouse)			Not determined		11	56973201	114267131	Mouse
27226730	Tibmd1_m	tibia midshaft diameter 1, 5 week (mouse)					11	62700000	109500000	Mouse
1301546	Pcir2_m	periosteal circumference 2 (mouse)			Not determined		11	66842594	100842826	Mouse
1357766	Si5lq6_m	serum IGFBP-5 level QTL 6 (mouse)			Not determined		11	66842594	100842826	Mouse
4141012	Femwf6_m	femur work to failure 6 (mouse)			Not determined			66842594	100842826	Mouse
1301833	Tbbmd5_m	total body bone mineral density 5 (mouse)			Not determined		11	66842594	100842826	Mouse
1300784	Prdt3_m	prion disease incubation time 3 (mouse)			Not determined		11	66842594	100842826	Mouse
1300628	Lgth6_m	body length 6 (mouse)			Not determined		11	66842594	100842826	Mouse
27226783	Tibl5_m	tibia length 5, 5 week (mouse)					11	68300000	102000000	Mouse
1300651	Pcyts3_m	plasmacytoma susceptibility 3 (mouse)			Not determined		11	70800372	104800540	Mouse
1301681	Sle13_m	systematic lupus erythematosus susceptibility 13 (mouse)			Not determined		11	70800372	104800540	Mouse
1558812	Rafar_m	retinoic acid induced forelimb autopod reduction (mouse)			Not determined		11	70800372	104800540	Mouse
4141339	Nilac2_m	nicotine induced locomotor activity 2 (mouse)			Not determined		11	70800372	104800540	Mouse
1301404	Sbmd4_m	spinal bone mineral density 4 (mouse)			Not determined		11	72128823	106128908	Mouse
1301310	Tmevd5_m	Theiler's murine encephalomyelitis virus induced demyelinating disease susceptibility 5 (mouse)			Not determined		11	72835299	106835463	Mouse
4142348	Pstc2_m	periosteal circumference 2 (mouse)			Not determined		11	72927789	106927907	Mouse
10043866	Adip19_m	adiposity 19 (mouse)			Not determined		11	72927789	106927907	Mouse
11038695	Par8_m	pulmonary adenoma resistance 8 (mouse)					11	77172953	111173092	Mouse
1301414	Heal10_m	wound healing/regeneration 10 (mouse)			Not determined		11	77546357	111546496	Mouse
10045616	Heal25_m	wound healing/regeneration 25 (mouse)			Not determined		11	77546357	111546496	Mouse
10413882	Moe1_m	modifier of epilepsy 1 (mouse)					11	77880152	111880273	Mouse
1301640	Lore4_m	loss of righting induced by ethanol 4 (mouse)			Not determined		11	79265183	107725646	Mouse
14746970	Manh71_m	mandible shape 71 (mouse)					11	79525431	113525431	Mouse
10043865	T2dm5sa_m	type 2 diabetes mellitus 5 in SMXA RI mice (mouse)			Not determined		11	79922933	104611872	Mouse
27226758	Femd3_m	femur midshaft diameter 3, 5 week (mouse)					11	81000000	102000000	Mouse
1300649	Crhq1_m	compensatory renal hypertrophy QTL 1 (mouse)			Not determined		11	81683655	115683810	Mouse
1300766	Skull16_m	skull morphology 16 (mouse)			Not determined		11	81683655	115683810	Mouse
10412288	Carg4_m	Candida albicans resistance gene 4 (mouse)			Not determined		11	81919441	115919441	Mouse
1301072	Eae22_m	experimental allergic encephalomyelitis 22 (mouse)			Not determined		11	82486872	116486994	Mouse
14747003	Mancz9_m	mandible centroid size 9 (mouse)					11	85954085	119954085	Mouse
15039374	Adip29_m	adiposity 29 (mouse)					11	86717494	120717494	Mouse
15039376	Bw42_m	body weight QTL 42 (mouse)					11	86717494	120717494	Mouse
15014785	Mvlq1_m	macrovesicular liver lesion QTL 1 (mouse)					11	86717494	120717494	Mouse
27226789	Feml16_m	femur length 16, 10 week (mouse)					11	87600000	126900000	Mouse
10044007	Hbnr14_m	Heligmosomoides bakeri nematode resistance 14 (mouse)			Not determined		11	87611774	121611872	Mouse
1357631	Motr1_m	modifier of tubby retinal degeneration 1 (mouse)			Not determined		11	87800372	103383289	Mouse
11251723	Ewc5_m	ethanol withdrawal and consumption 5 (mouse)					11	89978425	122082543	Mouse
1302034	Pkccl_m	protein kinase C content in lungs (mouse)			Not determined		11	91713782	122082543	Mouse
1558753	Ath19_m	atherosclerosis 19 (mouse)			Not determined		11	91713782	122082543	Mouse
10045617	Heal26_m	wound healing/regeneration 26 (mouse)			Not determined		11	93048547	112653728	Mouse
1301095	El6_m	epilepsy 6 (mouse)			Not determined		11	93338357	122082543	Mouse
4141939	Pregq2_m	pregnancy QTL 2 (mouse)			Not determined		11	94172953	118131898	Mouse
27226731	Tibmd4_m	tibia midshaft diameter 4, 10 week (mouse)					11	94300000	119000000	Mouse
4141465	Dbm2_m	diabetes modifier 2 (mouse)			Not determined			94546357	118131898	Mouse
1300944	Alcp20_m	alcohol preference locus 20 (mouse)			Not determined		11	95513139	122082543	Mouse
1301958	Alcp18_m	alcohol preference locus 18 (mouse)			Not determined		11	95513139	122082543	Mouse
1300962	Cd8mts4_m	CD8 memory T cell subset 4 (mouse)			Not determined		11	96246848	122082543	Mouse
1301535	Pas5b_m	pulmonary adenoma susceptibility 5b (mouse)			Not determined		11	96285639	108915558	Mouse
1301057	Nidd4_m	non-insulin-dependent diabetes mellitus 4 (mouse)			Not determined		11	96919310	122082543	Mouse
12910539	Sstapa3_m	suseptibility to Staphylococcus aureus infection 3 (mouse)					11	97006867	110713165	Mouse
1301983	Berr2_m	berghei resistance locus 2 (mouse)			Not determined		11	98461783	122082543	Mouse
10043976	Obq33_m	obesity QTL 33 (mouse)			Not determined		11	98609643	122082543	Mouse
10044001	Alcw8_m	alcohol withdrawal 8 (mouse)			Not determined		11	99363361	122082543	Mouse
11553867	Stmm5_m	skin tumor modifier of MSM 5 (mouse)					11	100167277	122082543	Mouse

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	1637
Count of miRNA genes:	724
Interacting mature miRNAs:	899
Transcripts:	ENSMUST00000103124, ENSMUST00000138603, ENSMUST00000146878, ENSMUST00000173630, ENSMUST00000174635
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001359052	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_010404	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_177981	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_011248744	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_011248745	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_030245580	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_030245581	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AJ000262	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AJ002271	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AJ002272	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AJ003128	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK138436	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK196068	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AL590968	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC034089	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC053043	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BY288360	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466662	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSMUST00000103124 ⟹ ENSMUSP00000099413

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	11	100,348,859 - 100,356,087 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000138603 ⟹ ENSMUSP00000133356

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	11	100,347,327 - 100,356,128 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000146878 ⟹ ENSMUSP00000134625

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	11	100,352,256 - 100,355,383 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000173630 ⟹ ENSMUSP00000134050

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	11	100,349,298 - 100,354,040 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000174635 ⟹ ENSMUSP00000133831

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	11	100,349,418 - 100,351,905 (-)	Ensembl

RefSeq Acc Id:

NM_001359052 ⟹ NP_001345981

RefSeq Status:

REVIEWED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	11	100,238,153 - 100,246,954 (-)	NCBI
GRCm38	11	100,347,327 - 100,356,128 (-)	NCBI

Sequence:

show sequence

CCGAGCACAGGTTATAAAGCCCCGGCTGCGGCAGCGGACTGCGGAGTCAAGATGCGCCCGAAAG
AGCAGGTGCAGAGCGGTGCGGGAGACGGGACAGGGTCGGGGGACCCAGCAGCAGGCACCCCCAC
GACCCAGCCTGCAGTTGGTCCCGCTCCGGAGCCCTCGGCGGAGCCCAAACCTGCTCCAGCGCAG
GGAACCGGGTCCGGACAAAAATCAGGATCCCGAACCAAGACAGGAAGCTTTTGTCGGTCCATGA
TCATTGGTGATTCGGACGCACCATGGACCCGCTACGTATTCCAGGGGCCTTACGGTCCCCGGGC
CACTGGCCTGGGCACTGGAAAGGCCGAGGGAATCTGGAAGACACCAGCCGCGTACATCGGCCGG
AGGCCCGGCGTGTCCGGCCCTGAGCGTGCGGCGTTTATTCGAGAGCTGCAGGAAGCGTTGTGTC
CTAATCCACCACCCACGAAGAAGATCACCGAAGATGATGTCAAAGTGATGTTGTATTTGCTGGA
AGAGAAAGAACGGGACCTGAACACAGCCGCCCGGATCGGCCAGTCCCTGGTGAAACAGAACAGT
GTCTTGATGGAGGAGAATAATAAGCTGGAAACCATGCTGGGCTCAGCCAGGGAGGAGATTTTAC
ATCTCCGGAAGCAGGTGAACCTGCGAGATGACCTTCTTCAGCTCTACTCAGACTCTGATGACGA
TGATGATGAGGAAGACGAGGAAGACGAGGAAGAGGGCGAAGAGGAGGAACGAGAAGGACAGAGG
GATCAAGACCAGCAGCACGACCACCCCTATGGTGCCCCCAAGCCACACCCTAAGGCTGAGACAG
CGCACCGCTGCCCACAGCTGGAAACCCTGCAGCAGAAGCTCAGGCTTCTGGAGGAAGAGAACGA
CCACCTGCGAGAGGAGGCCTCCCACCTTGACAACCTGGAGGACGAAGAGCAGATGCTCATTCTG
GAATGTGTGGAGCAGTTCTCTGAAGCCAGCCAGCAGATGGCAGAGCTATCGGAAGTGCTGGTGT
TGAGGCTGGAAGGCTATGAGAGGCAGCAGAAAGAGATCACTCAGCTGCAGGCCGAGATCACCAA
GCTACAACAGCGTTGTCAGTCTTATGGGGCCCAGACAGAGAAACTGCAGCAGATGCTGGCCTCA
GAGAAGGGGATCCACTCGGAGAGCCTGCGAGCTGGCTCCTACATGCAGGATTATGGGAGCAGGC
CTCGTGACCGCCAGGAGGATGGGAAGAGTCATCGCCAGCGCTCCTCCATGCCCGCAGGCTCTGT
CACCCACTATGGATACAGTGTGCCTCTGGATGCACTTCCAAGTTTCCCAGAGACACTGGCTGAG
GAGCTCCGAACATCTCTGAGGAAGTTCATCACTGACCCTGCGTATTTCATGGAGAGGGAGGGGC
GGAAGAAGGAGCAGAGGGCGATGCCACCCCCACCGGCTCAAGATCTCAAGCCACCTGAAGATTT
TGAGGCTCCAGAGGAGTTGGTTCCTGAGGAGGAGCTGGGGGCCATCGAAGAGGTGGGGACAGCT
GAGGATGGGCAGGCAGAAGAGAACGAGCAGGCGTCTGAGGAGACCGAGGCCTGGGAGGAGGTGG
AACCGGAGGTGGACGAGACCACAAGGATGAATGTGGTGGTCTCCGCCCTGGAGGCCAGTGGCCT
GGGCCCTTCCCACCTGGACATGAAGTATGTCCTCCAGCAACTGTCCAACTGGCAGGACGCCCAC
TCTAAGCGGCAGCAGAAGCAGAAGGTGGTCCCAAAAGACTCCCCAACCCCGCAGCAGCAAACAA
ACATGGGGGGCGGGATCCTGGAGCAGCAGCCCAGAGTGCCGACCCAGGACTCTCAGAGGCTGGA
GGAGGACAGGGCCACTCACTCTCCCAGTGCCAGGGAGGAAGAGGGGCCTTCTGGGGCCACCTAG
GCCTGGAACGAAGGCCTCTGCCAGCAAGGGCCACAGTTGGACCATTCCCCCGGCTCCTTTCGTC
TTCATGGCCCTGTGGGTGGGTACATGTGATTGTGCACCATTTATTAGAAGAGGAACCCGAAGTT
CAGAGATCTGAGATGACTTGGCCAAGGTCATACTAGGAGCAGATCTGAGCCCGTGTCTATGAGT
TCTGAACCCCTGGCCTGGTCTCACTGCTGTCCGCACCTCCTGCTCCCATCTTTGCGTTCCACCT
GAAGTTTTGGCAGCCTCCTTCAGTCGTTCTGATGCCCCCACCCCCGTTTTGGGGTGCACCAATG
GGTGGAACATCCCTGGCTGCGGCACAGTAAGATGGCGCAGGTTGTAAGCTGGGTCAGCACTTCC
GTGGCTGACCACGGGGGACCTGAGTGAGGGCCAGTGGTGGTTTTCTGTCGTCTCCTCTGTCAGG
GCCGACTGGGTTTGAGGGTGGTCTGGCTCCTGACTCCCATCCACCCCCTTCTCTTCCCGGGCTT
GCTGTTTCCCAGCAGCCGGAAGAAGCCCCACAGACAGCTTGAGACCCCCTCCTTCTGCTGCCTG
GCCAAGTCCCACCCTTCCTTTCTTTCCTCTGAAACAGGACCCTACCCCCCGCCCCCCCCATGTC
TGCCAGAAGTTCTCCCTCTCCTGTCCTGGTAGACCTGTCTCCTCTTGTAGGACAGGCTGAAAGA
ACCCCGGTCCCTCATTCTGAAACTGGGGCCAAAGCTGTGGCTGCTGGAACCCCAGGGGTGGAAG
CAAACTGGGCAGATTGGCTGGCTACCAGATCCAGCTCTGAGATGGGTGTGAGTGGGCGTGTCCC
TAGGGTAGGCAGTTATTGGGGGGGGGGGGGTCCTCTCTATCCCTTGAACCTCTCACGTAAAGGG
ACTTCCCCAGTCCTGGTTGGCTTTTTGAACCTGGTCCTTTTCGCTCTTTTTTACCCTTCTCCGT
TTCTATTACTGTGTGTGACGTAAAGTGTATCTGCGTGAGGGTTGTGTCCCTCTGCCCAGTGCTG
TCTCTGTGTCCTGTGGCCTGTGAGTTTCCTTCTAGAGTTCTGCCTTCCTCCACATCCGTGCTCA
CACAGAGCTGTGGCCTCAGCGCCTGCCCTGCTTCTGCAGCGCTTCATAGTCTTGTAGCTAGTCA
GCCTTTGTATTGATGTATGTGCCAATGTGGGAAATAAAGAACTTGTGAGATATCAAAAAAAAAA
AAAAAAAA

hide sequence

RefSeq Acc Id:

NM_010404 ⟹ NP_034534

RefSeq Status:

REVIEWED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	11	100,238,153 - 100,246,967 (-)	NCBI
GRCm38	11	100,347,327 - 100,356,141 (-)	NCBI
MGSCv37	11	100,208,641 - 100,217,455 (-)	RGD
Celera	11	110,964,725 - 110,973,537 (-)	RGD
cM Map	11		ENTREZGENE

Sequence:

show sequence

AGTGGAGCCCGCTCCGAGCACAGGTTATAAAGCCCCGGCTGCGGCAGCGGACTGCGGAGTCAAG
ATGCGCCCGAAAGAGCAGGTGCAGAGCGGTGCGGGAGACGGGACAGGGTCGGGGGACCCAGCAG
CAGGCACCCCCACGACCCAGCCTGCAGTTGGTCCCGCTCCGGAGCCCTCGGCGGAGCCCAAACC
TGCTCCAGCGCAGGGAACCGGGTCCGGACAAAAATCAGGATCCCGAACCAAGACAGGAAGCTTT
TGTCGGTCCATGATCATTGGTGATTCGGACGCACCATGGACCCGCTACGTATTCCAGGGGCCTT
ACGGTCCCCGGGCCACTGGCCTGGGCACTGGAAAGGCCGAGGGAATCTGGAAGACACCAGCCGC
GTACATCGGCCGGAGGCCCGGCGTGTCCGGCCCTGAGCGTGCGGCGTTTATTCGAGAGCTGCAG
GAAGCGTTGTGTCCTAATCCACCACCCACGAAGAAGATCACCGAAGATGATGTCAAAGTGATGT
TGTATTTGCTGGAAGAGAAAGAACGGGACCTGAACACAGCCGCCCGGATCGGCCAGTCCCTGGT
GAAACAGAACAGTGTCTTGATGGAGGAGAATAATAAGCTGGAAACCATGCTGGGCTCAGCCAGG
GAGGAGATTTTACATCTCCGGAAGCAGGTGAACCTGCGAGATGACCTTCTTCAGCTCTACTCAG
ACTCTGATGACGATGATGATGAGGAAGACGAGGAAGACGAGGAAGAGGGCGAAGAGGAGGAACG
AGAAGGACAGAGGGATCAAGACCAGCAGCACGACCACCCCTATGGTGCCCCCAAGCCACACCCT
AAGGCTGAGACAGCGCACCGCTGCCCACAGCTGGAAACCCTGCAGCAGAAGCTCAGGCTTCTGG
AGGAAGAGAACGACCACCTGCGAGAGGAGGCCTCCCACCTTGACAACCTGGAGGACGAAGAGCA
GATGCTCATTCTGGAATGTGTGGAGCAGTTCTCTGAAGCCAGCCAGCAGATGGCAGAGCTATCG
GAAGTGCTGGTGTTGAGGCTGGAAGGCTATGAGAGGCAGCAGAAAGAGATCACTCAGCTGCAGG
CCGAGATCACCAAGCTACAACAGCGTTGTCAGTCTTATGGGGCCCAGACAGAGAAACTGCAGCA
GATGCTGGCCTCAGAGAAGGGGATCCACTCGGAGAGCCTGCGAGCTGGCTCCTACATGCAGGAT
TATGGGAGCAGGCCTCGTGACCGCCAGGAGGATGGGAAGAGTCATCGCCAGCGCTCCTCCATGC
CCGCAGGCTCTGTCACCCACTATGGATACAGTGTGCCTCTGGATGCACTTCCAAGTTTCCCAGA
GACACTGGCTGAGGAGCTCCGAACATCTCTGAGGAAGTTCATCACTGACCCTGCGTATTTCATG
GAGAGACGTGACACTCACTGCAGGGAGGGGCGGAAGAAGGAGCAGAGGGCGATGCCACCCCCAC
CGGCTCAAGATCTCAAGCCACCTGAAGATTTTGAGGCTCCAGAGGAGTTGGTTCCTGAGGAGGA
GCTGGGGGCCATCGAAGAGGTGGGGACAGCTGAGGATGGGCAGGCAGAAGAGAACGAGCAGGCG
TCTGAGGAGACCGAGGCCTGGGAGGAGGTGGAACCGGAGGTGGACGAGACCACAAGGATGAATG
TGGTGGTCTCCGCCCTGGAGGCCAGTGGCCTGGGCCCTTCCCACCTGGACATGAAGTATGTCCT
CCAGCAACTGTCCAACTGGCAGGACGCCCACTCTAAGCGGCAGCAGAAGCAGAAGGTGGTCCCA
AAAGGTGAGTGTTCCCGCAGAGGACACCCTCCTGCCAGTGGGACAAGCTTTCGATCATCAACCA
TATGAGAGGTGAGAGTAGGTGAACATCCACCCCCTCCCCAGTGATCGCTTACCTTAACTAGGTC
CCACCCAGTGTGCTGATTTGCATGGACTTTGCATACGATTTACATACTATTTACATAGTTGCCT
CCAGTCCCCCTTGGCTAGAACTGCTGCCTCAGTGTTTATTTATGCAAAATCTGCTTACAAGTCC
AGCTGTCCGTCCACCTTCTTCCTTGGGGGGCTGAACTGGGAATCAGGGTTGGGCTATACACACC
TTTGTACCTCAACTTCCTATCTCTGCCCTATCCTTCATCCCGAATTCCTCTACCCACCAAGACT
CCCCAACCCCGCAGCAGCAAACAAACATGGGGGGCGGGATCCTGGAGCAGCAGCCCAGAGTGCC
GACCCAGGACTCTCAGAGGCTGGAGGAGGACAGGGCCACTCACTCTCCCAGTGCCAGGGAGGAA
GAGGGGCCTTCTGGGGCCACCTAGGCCTGGAACGAAGGCCTCTGCCAGCAAGGGCCACAGTTGG
ACCATTCCCCCGGGTGAGTGTGGGGCTCCTGCAGGGTGGTAGGGGCGGGTCAGGGTTCCCTCAG
CCCATCTAGAAACCCCAGCTTTGGGGAGCTACGTGCTCTGAGGGCAGGCCTTTCCGGCACTCCC
TCTGAGGAGCTGTCTGGGAAATCAGATGACTTAGCATCGGATCTTCTTTTGTGTTAGCTCCTTT
CGTCTTCATGGCCCTGTGGGTGGGTACATGTGATTGTGCACCATTTATTAGAAGAGGAACCCGA
AGTTCAGAGATCTGAGATGACTTGGCCAAGGTCATACTAGGAGCAGATCTGAGCCCGTGTCTAT
GAGTTCTGAACCCCTGGCCTGGTCTCACTGCTGTCCGCACCTCCTGCTCCCATCTTTGCGTTCC
ACCTGAAGTTTTGGCAGCCTCCTTCAGTCGTTCTGATGCCCCCACCCCCGTTTTGGGGTGCACC
AATGGGTGGAACATCCCTGGCTGCGGCACAGTAAGATGGCGCAGGTTGTAAGCTGGGTCAGCAC
TTCCGTGGCTGACCACGGGGGACCTGAGTGAGGGCCAGTGGTGGTTTTCTGTCGTCTCCTCTGT
CAGGGCCGACTGGGTTTGAGGGTGGTCTGGCTCCTGACTCCCATCCACCCCCTTCTCTTCCCGG
GCTTGCTGTTTCCCAGCAGCCGGAAGAAGCCCCACAGACAGCTTGAGACCCCCTCCTTCTGCTG
CCTGGCCAAGTCCCACCCTTCCTTTCTTTCCTCTGAAACAGGACCCTACCCCCCGCCCCCCCCA
TGTCTGCCAGAAGTTCTCCCTCTCCTGTCCTGGTAGACCTGTCTCCTCTTGTAGGACAGGCTGA
AAGAACCCCGGTCCCTCATTCTGAAACTGGGGCCAAAGCTGTGGCTGCTGGAACCCCAGGGGTG
GAAGCAAACTGGGCAGATTGGCTGGCTACCAGATCCAGCTCTGAGATGGGTGTGAGTGGGCGTG
TCCCTAGGGTAGGCAGTTATTGGGGGGGGGGGGGTCCTCTCTATCCCTTGAACCTCTCACGTAA
AGGGACTTCCCCAGTCCTGGTTGGCTTTTTGAACCTGGTCCTTTTCGCTCTTTTTTACCCTTCT
CCGTTTCTATTACTGTGTGTGACGTAAAGTGTATCTGCGTGAGGGTTGTGTCCCTCTGCCCAGT
GCTGTCTCTGTGTCCTGTGGCCTGTGAGTTTCCTTCTAGAGTTCTGCCTTCCTCCACATCCGTG
CTCACACAGAGCTGTGGCCTCAGCGCCTGCCCTGCTTCTGCAGCGCTTCATAGTCTTGTAGCTA
GTCAGCCTTTGTATTGATGTATGTGCCAATGTGGGAAATAAAGAACTTGTGAGATATCAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

NM_177981 ⟹ NP_817090

RefSeq Status:

REVIEWED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	11	100,238,153 - 100,246,967 (-)	NCBI
GRCm38	11	100,347,327 - 100,356,141 (-)	NCBI
MGSCv37	11	100,208,641 - 100,217,455 (-)	RGD
Celera	11	110,964,725 - 110,973,537 (-)	RGD
cM Map	11		ENTREZGENE

Sequence:

show sequence

AGTGGAGCCCGCTCCGAGCACAGGTTATAAAGCCCCGGCTGCGGCAGCGGACTGCGGAGTCAAG
ATGCGCCCGAAAGAGCAGGTGCAGAGCGGTGCGGGAGACGGGACAGGGTCGGGGGACCCAGCAG
CAGGCACCCCCACGACCCAGCCTGCAGTTGGTCCCGCTCCGGAGCCCTCGGCGGAGCCCAAACC
TGCTCCAGCGCAGGGAACCGGGTCCGGACAAAAATCAGGATCCCGAACCAAGACAGGAAGCTTT
TGTCGGTCCATGATCATTGGTGATTCGGACGCACCATGGACCCGCTACGTATTCCAGGGGCCTT
ACGGTCCCCGGGCCACTGGCCTGGGCACTGGAAAGGCCGAGGGAATCTGGAAGACACCAGCCGC
GTACATCGGCCGGAGGCCCGGCGTGTCCGGCCCTGAGCGTGCGGCGTTTATTCGAGAGCTGCAG
GAAGCGTTGTGTCCTAATCCACCACCCACGAAGAAGATCACCGAAGATGATGTCAAAGTGATGT
TGTATTTGCTGGAAGAGAAAGAACGGGACCTGAACACAGCCGCCCGGATCGGCCAGTCCCTGGT
GAAACAGAACAGTGTCTTGATGGAGGAGAATAATAAGCTGGAAACCATGCTGGGCTCAGCCAGG
GAGGAGATTTTACATCTCCGGAAGCAGGTGAACCTGCGAGATGACCTTCTTCAGCTCTACTCAG
ACTCTGATGACGATGATGATGAGGAAGACGAGGAAGACGAGGAAGAGGGCGAAGAGGAGGAACG
AGAAGGACAGAGGGATCAAGACCAGCAGCACGACCACCCCTATGGTGCCCCCAAGCCACACCCT
AAGGCTGAGACAGCGCACCGCTGCCCACAGCTGGAAACCCTGCAGCAGAAGCTCAGGCTTCTGG
AGGAAGAGAACGACCACCTGCGAGAGGAGGCCTCCCACCTTGACAACCTGGAGGACGAAGAGCA
GATGCTCATTCTGGAATGTGTGGAGCAGTTCTCTGAAGCCAGCCAGCAGATGGCAGAGCTATCG
GAAGTGCTGGTGTTGAGGCTGGAAGGCTATGAGAGGCAGCAGAAAGAGATCACTCAGCTGCAGG
CCGAGATCACCAAGCTACAACAGCGTTGTCAGTCTTATGGGGCCCAGACAGAGAAACTGCAGCA
GATGCTGGCCTCAGAGAAGGGGATCCACTCGGAGAGCCTGCGAGCTGGCTCCTACATGCAGGAT
TATGGGAGCAGGCCTCGTGACCGCCAGGAGGATGGGAAGAGTCATCGCCAGCGCTCCTCCATGC
CCGCAGGCTCTGTCACCCACTATGGATACAGTGTGCCTCTGGATGCACTTCCAAGTTTCCCAGA
GACACTGGCTGAGGAGCTCCGAACATCTCTGAGGAAGTTCATCACTGACCCTGCGTATTTCATG
GAGAGACGTGACACTCACTGCAGGGAGGGGCGGAAGAAGGAGCAGAGGGCGATGCCACCCCCAC
CGGCTCAAGATCTCAAGCCACCTGAAGATTTTGAGGCTCCAGAGGAGTTGGTTCCTGAGGAGGA
GCTGGGGGCCATCGAAGAGGTGGGGACAGCTGAGGATGGGCAGGCAGAAGAGAACGAGCAGGCG
TCTGAGGAGACCGAGGCCTGGGAGGAGGTGGAACCGGAGGTGGACGAGACCACAAGGATGAATG
TGGTGGTCTCCGCCCTGGAGGCCAGTGGCCTGGGCCCTTCCCACCTGGACATGAAGTATGTCCT
CCAGCAACTGTCCAACTGGCAGGACGCCCACTCTAAGCGGCAGCAGAAGCAGAAGGTGGTCCCA
AAAGACTCCCCAACCCCGCAGCAGCAAACAAACATGGGGGGCGGGATCCTGGAGCAGCAGCCCA
GAGTGCCGACCCAGGACTCTCAGAGGCTGGAGGAGGACAGGGCCACTCACTCTCCCAGTGCCAG
GGAGGAAGAGGGGCCTTCTGGGGCCACCTAGGCCTGGAACGAAGGCCTCTGCCAGCAAGGGCCA
CAGTTGGACCATTCCCCCGGCTCCTTTCGTCTTCATGGCCCTGTGGGTGGGTACATGTGATTGT
GCACCATTTATTAGAAGAGGAACCCGAAGTTCAGAGATCTGAGATGACTTGGCCAAGGTCATAC
TAGGAGCAGATCTGAGCCCGTGTCTATGAGTTCTGAACCCCTGGCCTGGTCTCACTGCTGTCCG
CACCTCCTGCTCCCATCTTTGCGTTCCACCTGAAGTTTTGGCAGCCTCCTTCAGTCGTTCTGAT
GCCCCCACCCCCGTTTTGGGGTGCACCAATGGGTGGAACATCCCTGGCTGCGGCACAGTAAGAT
GGCGCAGGTTGTAAGCTGGGTCAGCACTTCCGTGGCTGACCACGGGGGACCTGAGTGAGGGCCA
GTGGTGGTTTTCTGTCGTCTCCTCTGTCAGGGCCGACTGGGTTTGAGGGTGGTCTGGCTCCTGA
CTCCCATCCACCCCCTTCTCTTCCCGGGCTTGCTGTTTCCCAGCAGCCGGAAGAAGCCCCACAG
ACAGCTTGAGACCCCCTCCTTCTGCTGCCTGGCCAAGTCCCACCCTTCCTTTCTTTCCTCTGAA
ACAGGACCCTACCCCCCGCCCCCCCCATGTCTGCCAGAAGTTCTCCCTCTCCTGTCCTGGTAGA
CCTGTCTCCTCTTGTAGGACAGGCTGAAAGAACCCCGGTCCCTCATTCTGAAACTGGGGCCAAA
GCTGTGGCTGCTGGAACCCCAGGGGTGGAAGCAAACTGGGCAGATTGGCTGGCTACCAGATCCA
GCTCTGAGATGGGTGTGAGTGGGCGTGTCCCTAGGGTAGGCAGTTATTGGGGGGGGGGGGGTCC
TCTCTATCCCTTGAACCTCTCACGTAAAGGGACTTCCCCAGTCCTGGTTGGCTTTTTGAACCTG
GTCCTTTTCGCTCTTTTTTACCCTTCTCCGTTTCTATTACTGTGTGTGACGTAAAGTGTATCTG
CGTGAGGGTTGTGTCCCTCTGCCCAGTGCTGTCTCTGTGTCCTGTGGCCTGTGAGTTTCCTTCT
AGAGTTCTGCCTTCCTCCACATCCGTGCTCACACAGAGCTGTGGCCTCAGCGCCTGCCCTGCTT
CTGCAGCGCTTCATAGTCTTGTAGCTAGTCAGCCTTTGTATTGATGTATGTGCCAATGTGGGAA
ATAAAGAACTTGTGAGATATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_011248744 ⟹ XP_011247046

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	11	100,238,153 - 100,247,175 (-)	NCBI
GRCm38	11	100,347,327 - 100,356,352 (-)	NCBI

Sequence:

show sequence

AGAACCATTCTCAGAAGATGGAAGGGAAGAGAAATCCATCACCGTGGACTCGACCCCACGGAAT
AAGCTAGGCACTAGTTCATCTCTTTCTTTCTTCTTCTTTTATTTACTTCCTATCTCGTCACCAC
TGGCTGCTTTCTTGCAGGATCCTGAGTCCTCGGCACCACTAACTGATCAACGGTCACCCCTAGC
GCCACGCGTGGTACAGCCCAGTGGAGCCCGCTCCGAGCACAGGTTATAAAGCCCCGGCTGCGGC
AGCGGACTGCGGAGTCAAGATGCGCCCGAAAGAGCAGGTGCAGAGCGGTGCGGGAGACGGGACA
GGGTCGGGGGACCCAGCAGCAGGCACCCCCACGACCCAGCCTGCAGTTGGTCCCGCTCCGGAGC
CCTCGGCGGAGCCCAAACCTGCTCCAGCGCAGGGAACCGGGTCCGGACAAAAATCAGGATCCCG
AACCAAGACAGGAAGCTTTTGTCGGTCCATGATCATTGGTGATTCGGACGCACCATGGACCCGC
TACGTATTCCAGGGGCCTTACGGTCCCCGGGCCACTGGCCTGGGCACTGGAAAGGCCGAGGGAA
TCTGGAAGACACCAGCCGCGTACATCGGCCGGAGGCCCGGCGTGTCCGGCCCTGAGCGTGCGGC
GTTTATTCGAGAGCTGCAGGAAGCGTTGTGTCCTAATCCACCACCCACGAAGAAGATCACCGAA
GATGATGTCAAAGTGATGTTGTATTTGCTGGAAGAGAAAGAACGGGACCTGAACACAGCCGCCC
GGATCGGCCAGTCCCTGGTGAAACAGAACAGTGTCTTGATGGAGGAGAATAATAAGCTGGAAAC
CATGCTGGGCTCAGCCAGGGAGGAGATTTTACATCTCCGGAAGCAGGTGAACCTGCGAGATGAC
CTTCTTCAGCTCTACTCAGACTCTGATGACGATGATGATGAGGAAGACGAGGAAGACGAGGAAG
AGGGCGAAGAGGAGGAACGAGAAGGACAGAGGGATCAAGACCAGCAGCACGACCACCCCTATGG
TGCCCCCAAGCCACACCCTAAGGCTGAGACAGCGCACCGCTGCCCACAGCTGGAAACCCTGCAG
CAGAAGCTCAGGCTTCTGGAGGAAGAGAACGACCACCTGCGAGAGGAGGCCTCCCACCTTGACA
ACCTGGAGGACGAAGAGCAGATGCTCATTCTGGAATGTGTGGAGCAGTTCTCTGAAGCCAGCCA
GCAGATGGCAGAGCTATCGGAAGTGCTGGTGTTGAGGCTGGAAGGCTATGAGAGGCAGCAGAAA
GAGATCACTCAGCTGCAGGCCGAGATCACCAAGCTACAACAGCGTTGTCAGTCTTATGGGGCCC
AGACAGAGAAACTGCAGCAGATGCTGGCCTCAGAGAAGGGGATCCACTCGGAGCAGAGCCTGCG
AGCTGGCTCCTACATGCAGGATTATGGGAGCAGGCCTCGTGACCGCCAGGAGGATGGGAAGAGT
CATCGCCAGCGCTCCTCCATGCCCGCAGGCTCTGTCACCCACTATGGATACAGTGTGCCTCTGG
ATGCACTTCCAAGTTTCCCAGAGACACTGGCTGAGGAGCTCCGAACATCTCTGAGGAAGTTCAT
CACTGACCCTGCGTATTTCATGGAGAGACGTGACACTCACTGCAGGGAGGGGCGGAAGAAGGAG
CAGAGGGCGATGCCACCCCCACCGGCTCAAGATCTCAAGCCACCTGAAGATTTTGAGGCTCCAG
AGGAGTTGGTTCCTGAGGAGGAGCTGGGGGCCATCGAAGAGGTGGGGACAGCTGAGGATGGGCA
GGCAGAAGAGAACGAGCAGGCGTCTGAGGAGACCGAGGCCTGGGAGGAGGTGGAACCGGAGGTG
GACGAGACCACAAGGATGAATGTGGTGGTCTCCGCCCTGGAGGCCAGTGGCCTGGGCCCTTCCC
ACCTGGACATGAAGTATGTCCTCCAGCAACTGTCCAACTGGCAGGACGCCCACTCTAAGCGGCA
GCAGAAGCAGAAGGTGGTCCCAAAAGACTCCCCAACCCCGCAGCAGCAAACAAACATGGGGGGC
GGGATCCTGGAGCAGCAGCCCAGAGTGCCGACCCAGGACTCTCAGAGGCTGGAGGAGGACAGGG
CCACTCACTCTCCCAGTGCCAGGGAGGAAGAGGGGCCTTCTGGGGCCACCTAGGCCTGGAACGA
AGGCCTCTGCCAGCAAGGGCCACAGTTGGACCATTCCCCCGGCTCCTTTCGTCTTCATGGCCCT
GTGGGTGGGTACATGTGATTGTGCACCATTTATTAGAAGAGGAACCCGAAGTTCAGAGATCTGA
GATGACTTGGCCAAGGTCATACTAGGAGCAGATCTGAGCCCGTGTCTATGAGTTCTGAACCCCT
GGCCTGGTCTCACTGCTGTCCGCACCTCCTGCTCCCATCTTTGCGTTCCACCTGAAGTTTTGGC
AGCCTCCTTCAGTCGTTCTGATGCCCCCACCCCCGTTTTGGGGTGCACCAATGGGTGGAACATC
CCTGGCTGCGGCACAGTAAGATGGCGCAGGTTGTAAGCTGGGTCAGCACTTCCGTGGCTGACCA
CGGGGGACCTGAGTGAGGGCCAGTGGTGGTTTTCTGTCGTCTCCTCTGTCAGGGCCGACTGGGT
TTGAGGGTGGTCTGGCTCCTGACTCCCATCCACCCCCTTCTCTTCCCGGGCTTGCTGTTTCCCA
GCAGCCGGAAGAAGCCCCACAGACAGCTTGAGACCCCCTCCTTCTGCTGCCTGGCCAAGTCCCA
CCCTTCCTTTCTTTCCTCTGAAACAGGACCCTACCCCCCGCCCCCCCCATGTCTGCCAGAAGTT
CTCCCTCTCCTGTCCTGGTAGACCTGTCTCCTCTTGTAGGACAGGCTGAAAGAACCCCGGTCCC
TCATTCTGAAACTGGGGCCAAAGCTGTGGCTGCTGGAACCCCAGGGGTGGAAGCAAACTGGGCA
GATTGGCTGGCTACCAGATCCAGCTCTGAGATGGGTGTGAGTGGGCGTGTCCCTAGGGTAGGCA
GTTATTGGGGGGGGGGGGGTCCTCTCTATCCCTTGAACCTCTCACGTAAAGGGACTTCCCCAGT
CCTGGTTGGCTTTTTGAACCTGGTCCTTTTCGCTCTTTTTTACCCTTCTCCGTTTCTATTACTG
TGTGTGACGTAAAGTGTATCTGCGTGAGGGTTGTGTCCCTCTGCCCAGTGCTGTCTCTGTGTCC
TGTGGCCTGTGAGTTTCCTTCTAGAGTTCTGCCTTCCTCCACATCCGTGCTCACACAGAGCTGT
GGCCTCAGCGCCTGCCCTGCTTCTGCAGCGCTTCATAGTCTTGTAGCTAGTCAGCCTTTGTATT
GATGTATGTGCCAATGTGGGAAATAAAGAACTTGTGAGATATC

hide sequence

RefSeq Acc Id:

XM_011248745 ⟹ XP_011247047

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	11	100,238,153 - 100,247,178 (-)	NCBI
GRCm38	11	100,347,327 - 100,356,355 (-)	NCBI

Sequence:

show sequence

GACAGAACCATTCTCAGAAGATGGAAGGGAAGAGAAATCCATCACCGTGGACTCGACCCCACGG
AATAAGCTAGGCACTAGTTCATCTCTTTCTTTCTTCTTCTTTTATTTACTTCCTATCTCGTCAC
CACTGGCTGCTTTCTTGCAGGATCCTGAGTCCTCGGCACCACTAACTGATCAACGGTCACCCCT
AGCGCCACGCGTGGTACAGCCCAGTGGAGCCCGCTCCGAGCACAGGTTATAAAGCCCCGGCTGC
GGCAGCGGACTGCGGAGTCAAGATGCGCCCGAAAGAGCAGGTGCAGAGCGGTGCGGGAGACGGG
ACAGGGTCGGGGGACCCAGCAGCAGGCACCCCCACGACCCAGCCTGCAGTTGGTCCCGCTCCGG
AGCCCTCGGCGGAGCCCAAACCTGCTCCAGCGCAGGGAACCGGGTCCGGACAAAAATCAGGATC
CCGAACCAAGACAGGAAGCTTTTGTCGGTCCATGATCATTGGTGATTCGGACGCACCATGGACC
CGCTACGTATTCCAGGGGCCTTACGGTCCCCGGGCCACTGGCCTGGGCACTGGAAAGGCCGAGG
GAATCTGGAAGACACCAGCCGCGTACATCGGCCGGAGGCCCGGCGTGTCCGGCCCTGAGCGTGC
GGCGTTTATTCGAGAGCTGCAGGAAGCGTTGTGTCCTAATCCACCACCCACGAAGAAGATCACC
GAAGATGATGTCAAAGTGATGTTGTATTTGCTGGAAGAGAAAGAACGGGACCTGAACACAGCCG
CCCGGATCGGCCAGTCCCTGGTGAAACAGAACAGTGTCTTGATGGAGGAGAATAATAAGCTGGA
AACCATGCTGGGCTCAGCCAGGGAGGAGATTTTACATCTCCGGAAGCAGGTGAACCTGCGAGAT
GACCTTCTTCAGCTCTACTCAGACTCTGATGACGATGATGATGAGGAAGACGAGGAAGACGAGG
AAGAGGGCGAAGAGGAGGAACGAGAAGGACAGAGGGATCAAGACCAGCAGCACGACCACCCCTA
TGGTGCCCCCAAGCCACACCCTAAGGCTGAGACAGCGCACCGCTGCCCACAGCTGGAAACCCTG
CAGCAGAAGCTCAGGCTTCTGGAGGAAGAGAACGACCACCTGCGAGAGGAGGCCTCCCACCTTG
ACAACCTGGAGGACGAAGAGCAGATGCTCATTCTGGAATGTGTGGAGCAGTTCTCTGAAGCCAG
CCAGCAGATGGCAGAGCTATCGGAAGTGCTGGTGTTGAGGCTGGAAGGCTATGAGAGGCAGCAG
AAAGAGATCACTCAGCTGCAGGCCGAGATCACCAAGCTACAACAGCGTTGTCAGTCTTATGGGG
CCCAGACAGAGAAACTGCAGCAGATGCTGGCCTCAGAGAAGGGGATCCACTCGGAGCAGAGCCT
GCGAGCTGGCTCCTACATGCAGGATTATGGGAGCAGGCCTCGTGACCGCCAGGAGGATGGGAAG
AGTCATCGCCAGCGCTCCTCCATGCCCGCAGGCTCTGTCACCCACTATGGATACAGTGTGCCTC
TGGATGCACTTCCAAGTTTCCCAGAGACACTGGCTGAGGAGCTCCGAACATCTCTGAGGAAGTT
CATCACTGACCCTGCGTATTTCATGGAGAGGGAGGGGCGGAAGAAGGAGCAGAGGGCGATGCCA
CCCCCACCGGCTCAAGATCTCAAGCCACCTGAAGATTTTGAGGCTCCAGAGGAGTTGGTTCCTG
AGGAGGAGCTGGGGGCCATCGAAGAGGTGGGGACAGCTGAGGATGGGCAGGCAGAAGAGAACGA
GCAGGCGTCTGAGGAGACCGAGGCCTGGGAGGAGGTGGAACCGGAGGTGGACGAGACCACAAGG
ATGAATGTGGTGGTCTCCGCCCTGGAGGCCAGTGGCCTGGGCCCTTCCCACCTGGACATGAAGT
ATGTCCTCCAGCAACTGTCCAACTGGCAGGACGCCCACTCTAAGCGGCAGCAGAAGCAGAAGGT
GGTCCCAAAAGACTCCCCAACCCCGCAGCAGCAAACAAACATGGGGGGCGGGATCCTGGAGCAG
CAGCCCAGAGTGCCGACCCAGGACTCTCAGAGGCTGGAGGAGGACAGGGCCACTCACTCTCCCA
GTGCCAGGGAGGAAGAGGGGCCTTCTGGGGCCACCTAGGCCTGGAACGAAGGCCTCTGCCAGCA
AGGGCCACAGTTGGACCATTCCCCCGGCTCCTTTCGTCTTCATGGCCCTGTGGGTGGGTACATG
TGATTGTGCACCATTTATTAGAAGAGGAACCCGAAGTTCAGAGATCTGAGATGACTTGGCCAAG
GTCATACTAGGAGCAGATCTGAGCCCGTGTCTATGAGTTCTGAACCCCTGGCCTGGTCTCACTG
CTGTCCGCACCTCCTGCTCCCATCTTTGCGTTCCACCTGAAGTTTTGGCAGCCTCCTTCAGTCG
TTCTGATGCCCCCACCCCCGTTTTGGGGTGCACCAATGGGTGGAACATCCCTGGCTGCGGCACA
GTAAGATGGCGCAGGTTGTAAGCTGGGTCAGCACTTCCGTGGCTGACCACGGGGGACCTGAGTG
AGGGCCAGTGGTGGTTTTCTGTCGTCTCCTCTGTCAGGGCCGACTGGGTTTGAGGGTGGTCTGG
CTCCTGACTCCCATCCACCCCCTTCTCTTCCCGGGCTTGCTGTTTCCCAGCAGCCGGAAGAAGC
CCCACAGACAGCTTGAGACCCCCTCCTTCTGCTGCCTGGCCAAGTCCCACCCTTCCTTTCTTTC
CTCTGAAACAGGACCCTACCCCCCGCCCCCCCCATGTCTGCCAGAAGTTCTCCCTCTCCTGTCC
TGGTAGACCTGTCTCCTCTTGTAGGACAGGCTGAAAGAACCCCGGTCCCTCATTCTGAAACTGG
GGCCAAAGCTGTGGCTGCTGGAACCCCAGGGGTGGAAGCAAACTGGGCAGATTGGCTGGCTACC
AGATCCAGCTCTGAGATGGGTGTGAGTGGGCGTGTCCCTAGGGTAGGCAGTTATTGGGGGGGGG
GGGGTCCTCTCTATCCCTTGAACCTCTCACGTAAAGGGACTTCCCCAGTCCTGGTTGGCTTTTT
GAACCTGGTCCTTTTCGCTCTTTTTTACCCTTCTCCGTTTCTATTACTGTGTGTGACGTAAAGT
GTATCTGCGTGAGGGTTGTGTCCCTCTGCCCAGTGCTGTCTCTGTGTCCTGTGGCCTGTGAGTT
TCCTTCTAGAGTTCTGCCTTCCTCCACATCCGTGCTCACACAGAGCTGTGGCCTCAGCGCCTGC
CCTGCTTCTGCAGCGCTTCATAGTCTTGTAGCTAGTCAGCCTTTGTATTGATGTATGTGCCAAT
GTGGGAAATAAAGAACTTGTGAGATATC

hide sequence

RefSeq Acc Id:

XM_030245580 ⟹ XP_030101440

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	11	100,238,153 - 100,247,686 (-)	NCBI
GRCm38	11	100,347,327 - 100,356,860 (-)	NCBI

Sequence:

show sequence

TAACGGATGTTTTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACACGGGG
ATCTTGAAGAGTCGTCACAGCGAAACATTTAAGCAGGATCCCCTCCGAAGATGTTCTTTTTGGA
ATGTTTGAAGAACAGAACAGGTGCTTGCTTGGACTGTAGGGCTTGAGAATTAGGGTTGGAAATA
AAGAACGAGTGAACGCACTAAGATGGAAGACGTCCAGGGGCGAGCGCGAGAGTGAGAGGGACCT
GTGGATGACACGCAACACGTTGAAAGCCATACCGGAGTTTGGATTTCTCGCTTAGTCTACCTGG
GAAGGCACAGGCGTACTGCCTCGATTCTCAGGTCACCTCGGATCCTGAGTCCTCGGCACCACTA
ACTGATCAACGGTCACCCCTAGCGCCACGCGTGGTACAGCCCAGTGGAGCCCGCTCCGAGCACA
GGTTATAAAGCCCCGGCTGCGGCAGCGGACTGCGGAGTCAAGATGCGCCCGAAAGAGCAGGTGC
AGAGCGGTGCGGGAGACGGGACAGGGTCGGGGGACCCAGCAGCAGGCACCCCCACGACCCAGCC
TGCAGTTGGTCCCGCTCCGGAGCCCTCGGCGGAGCCCAAACCTGCTCCAGCGCAGGGAACCGGG
TCCGGACAAAAATCAGGATCCCGAACCAAGACAGGAAGCTTTTGTCGGTCCATGATCATTGGTG
ATTCGGACGCACCATGGACCCGCTACGTATTCCAGGGGCCTTACGGTCCCCGGGCCACTGGCCT
GGGCACTGGAAAGGCCGAGGGAATCTGGAAGACACCAGCCGCGTACATCGGCCGGAGGCCCGGC
GTGTCCGGCCCTGAGCGTGCGGCGTTTATTCGAGAGCTGCAGGAAGCGTTGTGTCCTAATCCAC
CACCCACGAAGAAGATCACCGAAGATGATGTCAAAGTGATGTTGTATTTGCTGGAAGAGAAAGA
ACGGGACCTGAACACAGCCGCCCGGATCGGCCAGTCCCTGGTGAAACAGAACAGTGTCTTGATG
GAGGAGAATAATAAGCTGGAAACCATGCTGGGCTCAGCCAGGGAGGAGATTTTACATCTCCGGA
AGCAGGTGAACCTGCGAGATGACCTTCTTCAGCTCTACTCAGACTCTGATGACGATGATGATGA
GGAAGACGAGGAAGACGAGGAAGAGGGCGAAGAGGAGGAACGAGAAGGACAGAGGGATCAAGAC
CAGCAGCACGACCACCCCTATGGTGCCCCCAAGCCACACCCTAAGGCTGAGACAGCGCACCGCT
GCCCACAGCTGGAAACCCTGCAGCAGAAGCTCAGGCTTCTGGAGGAAGAGAACGACCACCTGCG
AGAGGAGGCCTCCCACCTTGACAACCTGGAGGACGAAGAGCAGATGCTCATTCTGGAATGTGTG
GAGCAGTTCTCTGAAGCCAGCCAGCAGATGGCAGAGCTATCGGAAGTGCTGGTGTTGAGGCTGG
AAGGCTATGAGAGGCAGCAGAAAGAGATCACTCAGCTGCAGGCCGAGATCACCAAGCTACAACA
GCGTTGTCAGTCTTATGGGGCCCAGACAGAGAAACTGCAGCAGATGCTGGCCTCAGAGAAGGGG
ATCCACTCGGAGCAGAGCCTGCGAGCTGGCTCCTACATGCAGGATTATGGGAGCAGGCCTCGTG
ACCGCCAGGAGGATGGGAAGAGTCATCGCCAGCGCTCCTCCATGCCCGCAGGCTCTGTCACCCA
CTATGGATACAGTGTGCCTCTGGATGCACTTCCAAGTTTCCCAGAGACACTGGCTGAGGAGCTC
CGAACATCTCTGAGGAAGTTCATCACTGACCCTGCGTATTTCATGGAGAGACGTGACACTCACT
GCAGGGAGGGGCGGAAGAAGGAGCAGAGGGCGATGCCACCCCCACCGGCTCAAGATCTCAAGCC
ACCTGAAGATTTTGAGGCTCCAGAGGAGTTGGTTCCTGAGGAGGAGCTGGGGGCCATCGAAGAG
GTGGGGACAGCTGAGGATGGGCAGGCAGAAGAGAACGAGCAGGCGTCTGAGGAGACCGAGGCCT
GGGAGGAGGTGGAACCGGAGGTGGACGAGACCACAAGGATGAATGTGGTGGTCTCCGCCCTGGA
GGCCAGTGGCCTGGGCCCTTCCCACCTGGACATGAAGTATGTCCTCCAGCAACTGTCCAACTGG
CAGGACGCCCACTCTAAGCGGCAGCAGAAGCAGAAGGTGGTCCCAAAAGACTCCCCAACCCCGC
AGCAGCAAACAAACATGGGGGGCGGGATCCTGGAGCAGCAGCCCAGAGTGCCGACCCAGGACTC
TCAGAGGCTGGAGGAGGACAGGGCCACTCACTCTCCCAGTGCCAGGGAGGAAGAGGGGCCTTCT
GGGGCCACCTAGGCCTGGAACGAAGGCCTCTGCCAGCAAGGGCCACAGTTGGACCATTCCCCCG
GCTCCTTTCGTCTTCATGGCCCTGTGGGTGGGTACATGTGATTGTGCACCATTTATTAGAAGAG
GAACCCGAAGTTCAGAGATCTGAGATGACTTGGCCAAGGTCATACTAGGAGCAGATCTGAGCCC
GTGTCTATGAGTTCTGAACCCCTGGCCTGGTCTCACTGCTGTCCGCACCTCCTGCTCCCATCTT
TGCGTTCCACCTGAAGTTTTGGCAGCCTCCTTCAGTCGTTCTGATGCCCCCACCCCCGTTTTGG
GGTGCACCAATGGGTGGAACATCCCTGGCTGCGGCACAGTAAGATGGCGCAGGTTGTAAGCTGG
GTCAGCACTTCCGTGGCTGACCACGGGGGACCTGAGTGAGGGCCAGTGGTGGTTTTCTGTCGTC
TCCTCTGTCAGGGCCGACTGGGTTTGAGGGTGGTCTGGCTCCTGACTCCCATCCACCCCCTTCT
CTTCCCGGGCTTGCTGTTTCCCAGCAGCCGGAAGAAGCCCCACAGACAGCTTGAGACCCCCTCC
TTCTGCTGCCTGGCCAAGTCCCACCCTTCCTTTCTTTCCTCTGAAACAGGACCCTACCCCCCGC
CCCCCCCATGTCTGCCAGAAGTTCTCCCTCTCCTGTCCTGGTAGACCTGTCTCCTCTTGTAGGA
CAGGCTGAAAGAACCCCGGTCCCTCATTCTGAAACTGGGGCCAAAGCTGTGGCTGCTGGAACCC
CAGGGGTGGAAGCAAACTGGGCAGATTGGCTGGCTACCAGATCCAGCTCTGAGATGGGTGTGAG
TGGGCGTGTCCCTAGGGTAGGCAGTTATTGGGGGGGGGGGGGTCCTCTCTATCCCTTGAACCTC
TCACGTAAAGGGACTTCCCCAGTCCTGGTTGGCTTTTTGAACCTGGTCCTTTTCGCTCTTTTTT
ACCCTTCTCCGTTTCTATTACTGTGTGTGACGTAAAGTGTATCTGCGTGAGGGTTGTGTCCCTC
TGCCCAGTGCTGTCTCTGTGTCCTGTGGCCTGTGAGTTTCCTTCTAGAGTTCTGCCTTCCTCCA
CATCCGTGCTCACACAGAGCTGTGGCCTCAGCGCCTGCCCTGCTTCTGCAGCGCTTCATAGTCT
TGTAGCTAGTCAGCCTTTGTATTGATGTATGTGCCAATGTGGGAAATAAAGAACTTGTGAGATA
TC

hide sequence

RefSeq Acc Id:

XM_030245581 ⟹ XP_030101441

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	11	100,238,153 - 100,247,808 (-)	NCBI
GRCm38	11	100,347,327 - 100,356,982 (-)	NCBI

Sequence:

show sequence

CATTCAGGACTGAGAGCCAGCTTCCAAAGTAGCCATTTTTCTGGGGAGCATACGTCCGTCCATG
AGCTGAAGAGCACGGGTAAAGTCGTGGAGACCGACATCGATCAGTTCAGACCCTGGGATAACGG
ATGTTTTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACACGGGGATCTTG
AAGAGTCGTCACAGCGAAACATTTAAGCAGGATCCCCTCCGAAGATGTTCTTTTTGGAATGTTT
GAAGAACAGAACAGGTGCTTGCTTGGACTGTAGGGCTTGAGAATTAGGGTTGGAAATAAAGAAC
GAGTGAACGCACTAAGATGGAAGACGTCCAGGGGCGAGCGCGAGAGTGAGAGGGACCTGTGGAT
GACACGCAACACGTTGAAAGCCATACCGGAGTTTGGATTTCTCGCTTAGTCTACCTGGGAAGGC
ACAGGCGTACTGCCTCGATTCTCAGGTCACCTCGGATCCTGAGTCCTCGGCACCACTAACTGAT
CAACGGTCACCCCTAGCGCCACGCGTGGTACAGCCCAGTGGAGCCCGCTCCGAGCACAGGTTAT
AAAGCCCCGGCTGCGGCAGCGGACTGCGGAGTCAAGATGCGCCCGAAAGAGCAGGTGCAGAGCG
GTGCGGGAGACGGGACAGGGTCGGGGGACCCAGCAGCAGGCACCCCCACGACCCAGCCTGCAGT
TGGTCCCGCTCCGGAGCCCTCGGCGGAGCCCAAACCTGCTCCAGCGCAGGGAACCGGGTCCGGA
CAAAAATCAGGATCCCGAACCAAGACAGGAAGCTTTTGTCGGTCCATGATCATTGGTGATTCGG
ACGCACCATGGACCCGCTACGTATTCCAGGGGCCTTACGGTCCCCGGGCCACTGGCCTGGGCAC
TGGAAAGGCCGAGGGAATCTGGAAGACACCAGCCGCGTACATCGGCCGGAGGCCCGGCGTGTCC
GGCCCTGAGCGTGCGGCGTTTATTCGAGAGCTGCAGGAAGCGTTGTGTCCTAATCCACCACCCA
CGAAGAAGATCACCGAAGATGATGTCAAAGTGATGTTGTATTTGCTGGAAGAGAAAGAACGGGA
CCTGAACACAGCCGCCCGGATCGGCCAGTCCCTGGTGAAACAGAACAGTGTCTTGATGGAGGAG
AATAATAAGCTGGAAACCATGCTGGGCTCAGCCAGGGAGGAGATTTTACATCTCCGGAAGCAGG
TGAACCTGCGAGATGACCTTCTTCAGCTCTACTCAGACTCTGATGACGATGATGATGAGGAAGA
CGAGGAAGACGAGGAAGAGGGCGAAGAGGAGGAACGAGAAGGACAGAGGGATCAAGACCAGCAG
CACGACCACCCCTATGGTGCCCCCAAGCCACACCCTAAGGCTGAGACAGCGCACCGCTGCCCAC
AGCTGGAAACCCTGCAGCAGAAGCTCAGGCTTCTGGAGGAAGAGAACGACCACCTGCGAGAGGA
GGCCTCCCACCTTGACAACCTGGAGGACGAAGAGCAGATGCTCATTCTGGAATGTGTGGAGCAG
TTCTCTGAAGCCAGCCAGCAGATGGCAGAGCTATCGGAAGTGCTGGTGTTGAGGCTGGAAGGCT
ATGAGAGGCAGCAGAAAGAGATCACTCAGCTGCAGGCCGAGATCACCAAGCTACAACAGCGTTG
TCAGTCTTATGGGGCCCAGACAGAGAAACTGCAGCAGATGCTGGCCTCAGAGAAGGGGATCCAC
TCGGAGAGCCTGCGAGCTGGCTCCTACATGCAGGATTATGGGAGCAGGCCTCGTGACCGCCAGG
AGGATGGGAAGAGTCATCGCCAGCGCTCCTCCATGCCCGCAGGCTCTGTCACCCACTATGGATA
CAGTGTGCCTCTGGATGCACTTCCAAGTTTCCCAGAGACACTGGCTGAGGAGCTCCGAACATCT
CTGAGGAAGTTCATCACTGACCCTGCGTATTTCATGGAGAGACGTGACACTCACTGCAGGGAGG
GGCGGAAGAAGGAGCAGAGGGCGATGCCACCCCCACCGGCTCAAGATCTCAAGCCACCTGAAGA
TTTTGAGGCTCCAGAGGAGTTGGTTCCTGAGGAGGAGCTGGGGGCCATCGAAGAGGTGGGGACA
GCTGAGGATGGGCAGGCAGAAGAGAACGAGCAGGCGTCTGAGGAGACCGAGGCCTGGGAGGAGG
TGGAACCGGAGGTGGACGAGACCACAAGGATGAATGTGGTGGTCTCCGCCCTGGAGGCCAGTGG
CCTGGGCCCTTCCCACCTGGACATGAAGTATGTCCTCCAGCAACTGTCCAACTGGCAGGACGCC
CACTCTAAGCGGCAGCAGAAGCAGAAGGTGGTCCCAAAAGACTCCCCAACCCCGCAGCAGCAAA
CAAACATGGGGGGCGGGATCCTGGAGCAGCAGCCCAGAGTGCCGACCCAGGACTCTCAGAGGCT
GGAGGAGGACAGGGCCACTCACTCTCCCAGTGCCAGGGAGGAAGAGGGGCCTTCTGGGGCCACC
TAGGCCTGGAACGAAGGCCTCTGCCAGCAAGGGCCACAGTTGGACCATTCCCCCGGCTCCTTTC
GTCTTCATGGCCCTGTGGGTGGGTACATGTGATTGTGCACCATTTATTAGAAGAGGAACCCGAA
GTTCAGAGATCTGAGATGACTTGGCCAAGGTCATACTAGGAGCAGATCTGAGCCCGTGTCTATG
AGTTCTGAACCCCTGGCCTGGTCTCACTGCTGTCCGCACCTCCTGCTCCCATCTTTGCGTTCCA
CCTGAAGTTTTGGCAGCCTCCTTCAGTCGTTCTGATGCCCCCACCCCCGTTTTGGGGTGCACCA
ATGGGTGGAACATCCCTGGCTGCGGCACAGTAAGATGGCGCAGGTTGTAAGCTGGGTCAGCACT
TCCGTGGCTGACCACGGGGGACCTGAGTGAGGGCCAGTGGTGGTTTTCTGTCGTCTCCTCTGTC
AGGGCCGACTGGGTTTGAGGGTGGTCTGGCTCCTGACTCCCATCCACCCCCTTCTCTTCCCGGG
CTTGCTGTTTCCCAGCAGCCGGAAGAAGCCCCACAGACAGCTTGAGACCCCCTCCTTCTGCTGC
CTGGCCAAGTCCCACCCTTCCTTTCTTTCCTCTGAAACAGGACCCTACCCCCCGCCCCCCCCAT
GTCTGCCAGAAGTTCTCCCTCTCCTGTCCTGGTAGACCTGTCTCCTCTTGTAGGACAGGCTGAA
AGAACCCCGGTCCCTCATTCTGAAACTGGGGCCAAAGCTGTGGCTGCTGGAACCCCAGGGGTGG
AAGCAAACTGGGCAGATTGGCTGGCTACCAGATCCAGCTCTGAGATGGGTGTGAGTGGGCGTGT
CCCTAGGGTAGGCAGTTATTGGGGGGGGGGGGGTCCTCTCTATCCCTTGAACCTCTCACGTAAA
GGGACTTCCCCAGTCCTGGTTGGCTTTTTGAACCTGGTCCTTTTCGCTCTTTTTTACCCTTCTC
CGTTTCTATTACTGTGTGTGACGTAAAGTGTATCTGCGTGAGGGTTGTGTCCCTCTGCCCAGTG
CTGTCTCTGTGTCCTGTGGCCTGTGAGTTTCCTTCTAGAGTTCTGCCTTCCTCCACATCCGTGC
TCACACAGAGCTGTGGCCTCAGCGCCTGCCCTGCTTCTGCAGCGCTTCATAGTCTTGTAGCTAG
TCAGCCTTTGTATTGATGTATGTGCCAATGTGGGAAATAAAGAACTTGTGAGATATC

hide sequence

Protein Sequences


Protein RefSeqs	NP_001345981	(Get FASTA)	NCBI Sequence Viewer
	NP_034534	(Get FASTA)	NCBI Sequence Viewer
	NP_817090	(Get FASTA)	NCBI Sequence Viewer
	XP_011247046	(Get FASTA)	NCBI Sequence Viewer
	XP_011247047	(Get FASTA)	NCBI Sequence Viewer
	XP_030101440	(Get FASTA)	NCBI Sequence Viewer
	XP_030101441	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH34089	(Get FASTA)	NCBI Sequence Viewer
	AAH53043	(Get FASTA)	NCBI Sequence Viewer
	CAA03978	(Get FASTA)	NCBI Sequence Viewer
	CAA05286	(Get FASTA)	NCBI Sequence Viewer
	CAA05883	(Get FASTA)	NCBI Sequence Viewer
	EDL02566	(Get FASTA)	NCBI Sequence Viewer
	EDL02567	(Get FASTA)	NCBI Sequence Viewer
	O35668	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:	NP_034534 ⟸ NM_010404
- Peptide Label:	isoform A
- UniProtKB:	O35668 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MRPKEQVQSGAGDGTGSGDPAAGTPTTQPAVGPAPEPSAEPKPAPAQGTGSGQKSGSRTKTGSF CRSMIIGDSDAPWTRYVFQGPYGPRATGLGTGKAEGIWKTPAAYIGRRPGVSGPERAAFIRELQ EALCPNPPPTKKITEDDVKVMLYLLEEKERDLNTAARIGQSLVKQNSVLMEENNKLETMLGSAR EEILHLRKQVNLRDDLLQLYSDSDDDDDEEDEEDEEEGEEEEREGQRDQDQQHDHPYGAPKPHP KAETAHRCPQLETLQQKLRLLEEENDHLREEASHLDNLEDEEQMLILECVEQFSEASQQMAELS EVLVLRLEGYERQQKEITQLQAEITKLQQRCQSYGAQTEKLQQMLASEKGIHSESLRAGSYMQD YGSRPRDRQEDGKSHRQRSSMPAGSVTHYGYSVPLDALPSFPETLAEELRTSLRKFITDPAYFM ERRDTHCREGRKKEQRAMPPPPAQDLKPPEDFEAPEELVPEEELGAIEEVGTAEDGQAEENEQA SEETEAWEEVEPEVDETTRMNVVVSALEASGLGPSHLDMKYVLQQLSNWQDAHSKRQQKQKVVP KGECSRRGHPPASGTSFRSSTI hide sequence

RefSeq Acc Id:	NP_817090 ⟸ NM_177981
- Peptide Label:	isoform B
- UniProtKB:	O35668 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MRPKEQVQSGAGDGTGSGDPAAGTPTTQPAVGPAPEPSAEPKPAPAQGTGSGQKSGSRTKTGSF CRSMIIGDSDAPWTRYVFQGPYGPRATGLGTGKAEGIWKTPAAYIGRRPGVSGPERAAFIRELQ EALCPNPPPTKKITEDDVKVMLYLLEEKERDLNTAARIGQSLVKQNSVLMEENNKLETMLGSAR EEILHLRKQVNLRDDLLQLYSDSDDDDDEEDEEDEEEGEEEEREGQRDQDQQHDHPYGAPKPHP KAETAHRCPQLETLQQKLRLLEEENDHLREEASHLDNLEDEEQMLILECVEQFSEASQQMAELS EVLVLRLEGYERQQKEITQLQAEITKLQQRCQSYGAQTEKLQQMLASEKGIHSESLRAGSYMQD YGSRPRDRQEDGKSHRQRSSMPAGSVTHYGYSVPLDALPSFPETLAEELRTSLRKFITDPAYFM ERRDTHCREGRKKEQRAMPPPPAQDLKPPEDFEAPEELVPEEELGAIEEVGTAEDGQAEENEQA SEETEAWEEVEPEVDETTRMNVVVSALEASGLGPSHLDMKYVLQQLSNWQDAHSKRQQKQKVVP KDSPTPQQQTNMGGGILEQQPRVPTQDSQRLEEDRATHSPSAREEEGPSGAT hide sequence

RefSeq Acc Id:

XP_011247047 ⟸ XM_011248745

- Peptide Label:

isoform X3

- Sequence:

show sequence

MRPKEQVQSGAGDGTGSGDPAAGTPTTQPAVGPAPEPSAEPKPAPAQGTGSGQKSGSRTKTGSF
CRSMIIGDSDAPWTRYVFQGPYGPRATGLGTGKAEGIWKTPAAYIGRRPGVSGPERAAFIRELQ
EALCPNPPPTKKITEDDVKVMLYLLEEKERDLNTAARIGQSLVKQNSVLMEENNKLETMLGSAR
EEILHLRKQVNLRDDLLQLYSDSDDDDDEEDEEDEEEGEEEEREGQRDQDQQHDHPYGAPKPHP
KAETAHRCPQLETLQQKLRLLEEENDHLREEASHLDNLEDEEQMLILECVEQFSEASQQMAELS
EVLVLRLEGYERQQKEITQLQAEITKLQQRCQSYGAQTEKLQQMLASEKGIHSEQSLRAGSYMQ
DYGSRPRDRQEDGKSHRQRSSMPAGSVTHYGYSVPLDALPSFPETLAEELRTSLRKFITDPAYF
MEREGRKKEQRAMPPPPAQDLKPPEDFEAPEELVPEEELGAIEEVGTAEDGQAEENEQASEETE
AWEEVEPEVDETTRMNVVVSALEASGLGPSHLDMKYVLQQLSNWQDAHSKRQQKQKVVPKDSPT
PQQQTNMGGGILEQQPRVPTQDSQRLEEDRATHSPSAREEEGPSGAT

hide sequence

RefSeq Acc Id:

XP_011247046 ⟸ XM_011248744

- Peptide Label:

isoform X1

- Sequence:

show sequence

MRPKEQVQSGAGDGTGSGDPAAGTPTTQPAVGPAPEPSAEPKPAPAQGTGSGQKSGSRTKTGSF
CRSMIIGDSDAPWTRYVFQGPYGPRATGLGTGKAEGIWKTPAAYIGRRPGVSGPERAAFIRELQ
EALCPNPPPTKKITEDDVKVMLYLLEEKERDLNTAARIGQSLVKQNSVLMEENNKLETMLGSAR
EEILHLRKQVNLRDDLLQLYSDSDDDDDEEDEEDEEEGEEEEREGQRDQDQQHDHPYGAPKPHP
KAETAHRCPQLETLQQKLRLLEEENDHLREEASHLDNLEDEEQMLILECVEQFSEASQQMAELS
EVLVLRLEGYERQQKEITQLQAEITKLQQRCQSYGAQTEKLQQMLASEKGIHSEQSLRAGSYMQ
DYGSRPRDRQEDGKSHRQRSSMPAGSVTHYGYSVPLDALPSFPETLAEELRTSLRKFITDPAYF
MERRDTHCREGRKKEQRAMPPPPAQDLKPPEDFEAPEELVPEEELGAIEEVGTAEDGQAEENEQ
ASEETEAWEEVEPEVDETTRMNVVVSALEASGLGPSHLDMKYVLQQLSNWQDAHSKRQQKQKVV
PKDSPTPQQQTNMGGGILEQQPRVPTQDSQRLEEDRATHSPSAREEEGPSGAT

hide sequence

RefSeq Acc Id:	XP_030101441 ⟸ XM_030245581
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_030101440 ⟸ XM_030245580
- Peptide Label:	isoform X1

RefSeq Acc Id:	NP_001345981 ⟸ NM_001359052
- Peptide Label:	isoform C

RefSeq Acc Id:

ENSMUSP00000133356 ⟸ ENSMUST00000138603

RefSeq Acc Id:

ENSMUSP00000134625 ⟸ ENSMUST00000146878

RefSeq Acc Id:

ENSMUSP00000133831 ⟸ ENSMUST00000174635

RefSeq Acc Id:

ENSMUSP00000134050 ⟸ ENSMUST00000173630

RefSeq Acc Id:

ENSMUSP00000099413 ⟸ ENSMUST00000103124

Protein Domains

HAP1 N-terminal

Promoters

RGD ID:

6821039

Promoter ID:

MM_KWN:9769

Type:

Non-CpG

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

Brain

Transcripts:

OTTMUST00000014215

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	11	100,210,236 - 100,210,736 (-)	MPROMDB

RGD ID:

6821041

Promoter ID:

MM_KWN:9770

Type:

Non-CpG

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

Brain

Transcripts:

OTTMUST00000014216

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	11	100,212,386 - 100,212,886 (-)	MPROMDB

RGD ID:

6821042

Promoter ID:

MM_KWN:9771

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, ES_Cell, Kidney

Transcripts:

NM_010404, NM_177981, OTTMUST00000014217

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	11	100,216,761 - 100,217,337 (-)	MPROMDB

RGD ID:

8676684

Promoter ID:

EPDNEW_M16372

Type:

initiation region

Name:

Hap1_1

Description:

Mus musculus huntingtin-associated protein 1 , transcript variant1, mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	11	100,356,086 - 100,356,146	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:1261831	AgrOrtholog
Ensembl Genes	ENSMUSG00000006930	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein	ENSMUSP00000099413	ENTREZGENE, UniProtKB/Swiss-Prot
	ENSMUSP00000133356	ENTREZGENE, UniProtKB/Swiss-Prot
	ENSMUSP00000133831	UniProtKB/TrEMBL
	ENSMUSP00000134050	UniProtKB/TrEMBL
	ENSMUSP00000134625	UniProtKB/TrEMBL
Ensembl Transcript	ENSMUST00000103124	ENTREZGENE, UniProtKB/Swiss-Prot
	ENSMUST00000138603	ENTREZGENE, UniProtKB/Swiss-Prot
	ENSMUST00000146878	UniProtKB/TrEMBL
	ENSMUST00000173630	UniProtKB/TrEMBL
	ENSMUST00000174635	UniProtKB/TrEMBL
InterPro	HAP1_N	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	mmu:15114	UniProtKB/Swiss-Prot
MGD	MGI:1261831	ENTREZGENE
NCBI Gene	15114	ENTREZGENE
Pfam	HAP1_N	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Hap1	PhenoGen
UniProt	G3UXU7_MOUSE	UniProtKB/TrEMBL
	G3UYE4_MOUSE	UniProtKB/TrEMBL
	G3UZT4_MOUSE	UniProtKB/TrEMBL
	HAP1_MOUSE	UniProtKB/Swiss-Prot, ENTREZGENE
UniProt Secondary	O35636	UniProtKB/Swiss-Prot

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - MGI

Imported Annotations - KEGG (archival)