Hap1 (huntingtin-associated protein 1) - Rat Genome Database
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Gene: Hap1 (huntingtin-associated protein 1) Mus musculus
Analyze
Symbol: Hap1
Name: huntingtin-associated protein 1
RGD ID: 68455
MGI Page MGI
Description: Is expressed in several structures, including alimentary system; genitourinary system; nervous system; respiratory system; and sensory organ. Used to study endogenous depression. Human ortholog(s) of this gene implicated in Huntington's disease. Orthologous to human HAP1 (huntingtin associated protein 1).
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: HAP; HAP-1; MGC31449
RGD Orthologs
Human
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3911100,238,153 - 100,247,808 (-)NCBIGRCm39mm39
GRCm39 Ensembl11100,238,153 - 100,246,954 (-)Ensembl
GRCm3811100,347,327 - 100,356,982 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl11100,347,327 - 100,356,128 (-)EnsemblGRCm38mm10GRCm38
MGSCv3711100,208,641 - 100,217,455 (-)NCBIGRCm37mm9NCBIm37
MGSCv3611100,163,417 - 100,172,177 (-)NCBImm8
Celera11110,964,725 - 110,973,537 (-)NCBICelera
Cytogenetic Map11DNCBI
cM Map1163.47NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

Additional References at PubMed
PMID:9502734   PMID:9599014   PMID:9657855   PMID:9888310   PMID:10087300   PMID:10349636   PMID:10713390   PMID:10974549   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851  
PMID:12477932   PMID:12890790   PMID:14681479   PMID:15242649   PMID:15379999   PMID:15489334   PMID:15496430   PMID:15548548   PMID:15782199   PMID:16141072   PMID:16141073   PMID:16339760  
PMID:16602821   PMID:16604089   PMID:17166838   PMID:17868456   PMID:18554416   PMID:18636121   PMID:18799476   PMID:19996106   PMID:20304926   PMID:21146532   PMID:21267068   PMID:21357693  
PMID:21544547   PMID:21677750   PMID:21873635   PMID:21985783   PMID:22442722   PMID:22731248   PMID:23532844   PMID:24227713   PMID:24355921   PMID:24366265   PMID:24453320   PMID:24487590  
PMID:24893171   PMID:24952961   PMID:25671650   PMID:25686248   PMID:25875952   PMID:27315547   PMID:27624941   PMID:28083816   PMID:28137862   PMID:28190767   PMID:28259758   PMID:31445164  
PMID:32581705   PMID:32747555  


Genomics

Comparative Map Data
Hap1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3911100,238,153 - 100,247,808 (-)NCBIGRCm39mm39
GRCm39 Ensembl11100,238,153 - 100,246,954 (-)Ensembl
GRCm3811100,347,327 - 100,356,982 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl11100,347,327 - 100,356,128 (-)EnsemblGRCm38mm10GRCm38
MGSCv3711100,208,641 - 100,217,455 (-)NCBIGRCm37mm9NCBIm37
MGSCv3611100,163,417 - 100,172,177 (-)NCBImm8
Celera11110,964,725 - 110,973,537 (-)NCBICelera
Cytogenetic Map11DNCBI
cM Map1163.47NCBI
HAP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1741,717,742 - 41,734,644 (-)EnsemblGRCh38hg38GRCh38
GRCh381741,717,739 - 41,734,646 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371739,873,991 - 39,890,898 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361737,132,417 - 37,144,424 (-)NCBINCBI36hg18NCBI36
Build 341737,132,417 - 37,144,422NCBI
Celera1736,530,004 - 36,542,110 (-)NCBI
Cytogenetic Map17q21.2NCBI
HuRef1735,641,052 - 35,653,084 (-)NCBIHuRef
CHM1_11740,114,361 - 40,126,487 (-)NCBICHM1_1
Hap1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21085,277,890 - 85,286,126 (-)NCBI
Rnor_6.0 Ensembl1088,257,976 - 88,266,210 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01088,257,975 - 88,266,210 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01088,051,219 - 88,059,478 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41089,285,396 - 89,293,631 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11089,299,766 - 89,308,001 (-)NCBI
Celera1083,995,991 - 84,004,228 (-)NCBICelera
Cytogenetic Map10q31NCBI
HAP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11715,797,949 - 15,810,299 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1715,797,949 - 15,810,299 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01715,578,658 - 15,596,313 (+)NCBIMhudiblu_PPA_v0panPan3
HAP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl921,065,846 - 21,072,991 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1921,065,770 - 21,074,462 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Hap1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_00493649016,645,116 - 16,652,310 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
HAP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1220,939,554 - 20,950,051 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11220,938,463 - 20,950,053 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21221,126,539 - 21,137,053 (-)NCBISscrofa10.2Sscrofa10.2susScr3
HAP1
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11664,515,013 - 64,524,270 (+)NCBI

Position Markers
Hap1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
MGSCv3711100,219,597 - 100,219,888UniSTSGRCm37
MGSCv3711100,210,255 - 100,210,374UniSTSGRCm37
MGSCv3711100,209,101 - 100,209,407UniSTSGRCm37
Celera11110,975,686 - 110,975,969UniSTS
Celera11110,965,184 - 110,965,490UniSTS
Celera11110,966,338 - 110,966,457UniSTS
Cytogenetic Map11DUniSTS
cM Map1160.0UniSTS
cM Map1160.0UniSTS
cM Map1160.0UniSTS
UniSTS:236732  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3811100,347,973 - 100,348,082UniSTSGRCm38
MGSCv3711100,209,287 - 100,209,396UniSTSGRCm37
Celera11110,965,370 - 110,965,479UniSTS
Cytogenetic Map11DUniSTS
cM Map1160.0UniSTS
AJ003128  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3811100,348,923 - 100,349,060UniSTSGRCm38
MGSCv3711100,210,237 - 100,210,374UniSTSGRCm37
Celera11110,966,320 - 110,966,457UniSTS
Cytogenetic Map11DUniSTS
cM Map1160.0UniSTS
Whitehead/MRC_RH111334.91UniSTS
Hap1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3811100,348,941 - 100,349,060UniSTSGRCm38
MGSCv3711100,210,255 - 100,210,374UniSTSGRCm37
Celera11110,966,338 - 110,966,457UniSTS
Cytogenetic Map11DUniSTS
Hap1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3811100,347,787 - 100,348,093UniSTSGRCm38
MGSCv3711100,209,101 - 100,209,407UniSTSGRCm37
Celera11110,965,184 - 110,965,490UniSTS
Cytogenetic Map11DUniSTS
cM Map1160.0UniSTS
Hap1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3811100,358,283 - 100,358,574UniSTSGRCm38
MGSCv3711100,219,597 - 100,219,888UniSTSGRCm37
Celera11110,975,686 - 110,975,969UniSTS
Cytogenetic Map11DUniSTS
cM Map1160.0UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357859Lvrq7_mliver weight QTL 7 (mouse)Not determined1112318637118131898Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112318637118131898Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44739211113167183Mouse
4142121Tmc1m2_mTmc1 modifier 2 (mouse)Not determined1156973201114267131Mouse
27226730Tibmd1_mtibia midshaft diameter 1, 5 week (mouse)1162700000109500000Mouse
1301546Pcir2_mperiosteal circumference 2 (mouse)Not determined1166842594100842826Mouse
1357766Si5lq6_mserum IGFBP-5 level QTL 6 (mouse)Not determined1166842594100842826Mouse
4141012Femwf6_mfemur work to failure 6 (mouse)Not determined66842594100842826Mouse
1301833Tbbmd5_mtotal body bone mineral density 5 (mouse)Not determined1166842594100842826Mouse
1300784Prdt3_mprion disease incubation time 3 (mouse)Not determined1166842594100842826Mouse
1300628Lgth6_mbody length 6 (mouse)Not determined1166842594100842826Mouse
27226783Tibl5_mtibia length 5, 5 week (mouse)1168300000102000000Mouse
1300651Pcyts3_mplasmacytoma susceptibility 3 (mouse)Not determined1170800372104800540Mouse
1301681Sle13_msystematic lupus erythematosus susceptibility 13 (mouse)Not determined1170800372104800540Mouse
1558812Rafar_mretinoic acid induced forelimb autopod reduction (mouse)Not determined1170800372104800540Mouse
4141339Nilac2_mnicotine induced locomotor activity 2 (mouse)Not determined1170800372104800540Mouse
1301404Sbmd4_mspinal bone mineral density 4 (mouse)Not determined1172128823106128908Mouse
1301310Tmevd5_mTheiler's murine encephalomyelitis virus induced demyelinating disease susceptibility 5 (mouse)Not determined1172835299106835463Mouse
4142348Pstc2_mperiosteal circumference 2 (mouse)Not determined1172927789106927907Mouse
10043866Adip19_madiposity 19 (mouse)Not determined1172927789106927907Mouse
11038695Par8_mpulmonary adenoma resistance 8 (mouse)1177172953111173092Mouse
1301414Heal10_mwound healing/regeneration 10 (mouse)Not determined1177546357111546496Mouse
10045616Heal25_mwound healing/regeneration 25 (mouse)Not determined1177546357111546496Mouse
10413882Moe1_mmodifier of epilepsy 1 (mouse)1177880152111880273Mouse
1301640Lore4_mloss of righting induced by ethanol 4 (mouse)Not determined1179265183107725646Mouse
14746970Manh71_mmandible shape 71 (mouse)1179525431113525431Mouse
10043865T2dm5sa_mtype 2 diabetes mellitus 5 in SMXA RI mice (mouse)Not determined1179922933104611872Mouse
27226758Femd3_mfemur midshaft diameter 3, 5 week (mouse)1181000000102000000Mouse
1300649Crhq1_mcompensatory renal hypertrophy QTL 1 (mouse)Not determined1181683655115683810Mouse
1300766Skull16_mskull morphology 16 (mouse)Not determined1181683655115683810Mouse
10412288Carg4_mCandida albicans resistance gene 4 (mouse)Not determined1181919441115919441Mouse
1301072Eae22_mexperimental allergic encephalomyelitis 22 (mouse)Not determined1182486872116486994Mouse
14747003Mancz9_mmandible centroid size 9 (mouse)1185954085119954085Mouse
15039374Adip29_madiposity 29 (mouse)1186717494120717494Mouse
15039376Bw42_mbody weight QTL 42 (mouse)1186717494120717494Mouse
15014785Mvlq1_mmacrovesicular liver lesion QTL 1 (mouse)1186717494120717494Mouse
27226789Feml16_mfemur length 16, 10 week (mouse)1187600000126900000Mouse
10044007Hbnr14_mHeligmosomoides bakeri nematode resistance 14 (mouse)Not determined1187611774121611872Mouse
1357631Motr1_mmodifier of tubby retinal degeneration 1 (mouse)Not determined1187800372103383289Mouse
11251723Ewc5_methanol withdrawal and consumption 5 (mouse)1189978425122082543Mouse
1302034Pkccl_mprotein kinase C content in lungs (mouse)Not determined1191713782122082543Mouse
1558753Ath19_matherosclerosis 19 (mouse)Not determined1191713782122082543Mouse
10045617Heal26_mwound healing/regeneration 26 (mouse)Not determined1193048547112653728Mouse
1301095El6_mepilepsy 6 (mouse)Not determined1193338357122082543Mouse
4141939Pregq2_mpregnancy QTL 2 (mouse)Not determined1194172953118131898Mouse
27226731Tibmd4_mtibia midshaft diameter 4, 10 week (mouse)1194300000119000000Mouse
4141465Dbm2_mdiabetes modifier 2 (mouse)Not determined94546357118131898Mouse
1300944Alcp20_malcohol preference locus 20 (mouse)Not determined1195513139122082543Mouse
1301958Alcp18_malcohol preference locus 18 (mouse)Not determined1195513139122082543Mouse
1300962Cd8mts4_mCD8 memory T cell subset 4 (mouse)Not determined1196246848122082543Mouse
1301535Pas5b_mpulmonary adenoma susceptibility 5b (mouse)Not determined1196285639108915558Mouse
1301057Nidd4_mnon-insulin-dependent diabetes mellitus 4 (mouse)Not determined1196919310122082543Mouse
12910539Sstapa3_msuseptibility to Staphylococcus aureus infection 3 (mouse)1197006867110713165Mouse
1301983Berr2_mberghei resistance locus 2 (mouse)Not determined1198461783122082543Mouse
10043976Obq33_mobesity QTL 33 (mouse)Not determined1198609643122082543Mouse
10044001Alcw8_malcohol withdrawal 8 (mouse)Not determined1199363361122082543Mouse
11553867Stmm5_mskin tumor modifier of MSM 5 (mouse)11100167277122082543Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1637
Count of miRNA genes:724
Interacting mature miRNAs:899
Transcripts:ENSMUST00000103124, ENSMUST00000138603, ENSMUST00000146878, ENSMUST00000173630, ENSMUST00000174635
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001359052 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_010404 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_177981 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011248744 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011248745 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245580 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245581 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AJ000262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ002271 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ002272 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ003128 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK138436 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK196068 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL590968 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC034089 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC053043 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY288360 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466662 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000103124   ⟹   ENSMUSP00000099413
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl11100,348,859 - 100,356,087 (-)Ensembl
RefSeq Acc Id: ENSMUST00000138603   ⟹   ENSMUSP00000133356
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl11100,347,327 - 100,356,128 (-)Ensembl
RefSeq Acc Id: ENSMUST00000146878   ⟹   ENSMUSP00000134625
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl11100,352,256 - 100,355,383 (-)Ensembl
RefSeq Acc Id: ENSMUST00000173630   ⟹   ENSMUSP00000134050
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl11100,349,298 - 100,354,040 (-)Ensembl
RefSeq Acc Id: ENSMUST00000174635   ⟹   ENSMUSP00000133831
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl11100,349,418 - 100,351,905 (-)Ensembl
RefSeq Acc Id: NM_001359052   ⟹   NP_001345981
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911100,238,153 - 100,246,954 (-)NCBI
GRCm3811100,347,327 - 100,356,128 (-)NCBI
Sequence:
RefSeq Acc Id: NM_010404   ⟹   NP_034534
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911100,238,153 - 100,246,967 (-)NCBI
GRCm3811100,347,327 - 100,356,141 (-)NCBI
MGSCv3711100,208,641 - 100,217,455 (-)RGD
Celera11110,964,725 - 110,973,537 (-)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_177981   ⟹   NP_817090
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911100,238,153 - 100,246,967 (-)NCBI
GRCm3811100,347,327 - 100,356,141 (-)NCBI
MGSCv3711100,208,641 - 100,217,455 (-)RGD
Celera11110,964,725 - 110,973,537 (-)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_011248744   ⟹   XP_011247046
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911100,238,153 - 100,247,175 (-)NCBI
GRCm3811100,347,327 - 100,356,352 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011248745   ⟹   XP_011247047
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911100,238,153 - 100,247,178 (-)NCBI
GRCm3811100,347,327 - 100,356,355 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030245580   ⟹   XP_030101440
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911100,238,153 - 100,247,686 (-)NCBI
GRCm3811100,347,327 - 100,356,860 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030245581   ⟹   XP_030101441
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911100,238,153 - 100,247,808 (-)NCBI
GRCm3811100,347,327 - 100,356,982 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_034534   ⟸   NM_010404
- Peptide Label: isoform A
- UniProtKB: O35668 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_817090   ⟸   NM_177981
- Peptide Label: isoform B
- UniProtKB: O35668 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011247047   ⟸   XM_011248745
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_011247046   ⟸   XM_011248744
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_030101441   ⟸   XM_030245581
- Peptide Label: isoform X2
RefSeq Acc Id: XP_030101440   ⟸   XM_030245580
- Peptide Label: isoform X1
RefSeq Acc Id: NP_001345981   ⟸   NM_001359052
- Peptide Label: isoform C
RefSeq Acc Id: ENSMUSP00000133356   ⟸   ENSMUST00000138603
RefSeq Acc Id: ENSMUSP00000134625   ⟸   ENSMUST00000146878
RefSeq Acc Id: ENSMUSP00000133831   ⟸   ENSMUST00000174635
RefSeq Acc Id: ENSMUSP00000134050   ⟸   ENSMUST00000173630
RefSeq Acc Id: ENSMUSP00000099413   ⟸   ENSMUST00000103124
Protein Domains
HAP1 N-terminal

Promoters
RGD ID:6821039
Promoter ID:MM_KWN:9769
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:OTTMUST00000014215
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv3611100,210,236 - 100,210,736 (-)MPROMDB
RGD ID:6821041
Promoter ID:MM_KWN:9770
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:OTTMUST00000014216
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv3611100,212,386 - 100,212,886 (-)MPROMDB
RGD ID:6821042
Promoter ID:MM_KWN:9771
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney
Transcripts:NM_010404,   NM_177981,   OTTMUST00000014217
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv3611100,216,761 - 100,217,337 (-)MPROMDB
RGD ID:8676684
Promoter ID:EPDNEW_M16372
Type:initiation region
Name:Hap1_1
Description:Mus musculus huntingtin-associated protein 1 , transcript variant1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3811100,356,086 - 100,356,146EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1261831 AgrOrtholog
Ensembl Genes ENSMUSG00000006930 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000099413 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000133356 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000133831 UniProtKB/TrEMBL
  ENSMUSP00000134050 UniProtKB/TrEMBL
  ENSMUSP00000134625 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000103124 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000138603 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000146878 UniProtKB/TrEMBL
  ENSMUST00000173630 UniProtKB/TrEMBL
  ENSMUST00000174635 UniProtKB/TrEMBL
InterPro HAP1_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:15114 UniProtKB/Swiss-Prot
MGD MGI:1261831 ENTREZGENE
NCBI Gene 15114 ENTREZGENE
Pfam HAP1_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Hap1 PhenoGen
UniProt G3UXU7_MOUSE UniProtKB/TrEMBL
  G3UYE4_MOUSE UniProtKB/TrEMBL
  G3UZT4_MOUSE UniProtKB/TrEMBL
  HAP1_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
UniProt Secondary O35636 UniProtKB/Swiss-Prot