Tmx2 (thioredoxin-related transmembrane protein 2) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: Tmx2 (thioredoxin-related transmembrane protein 2) Mus musculus
Analyze
Symbol: Tmx2
Name: thioredoxin-related transmembrane protein 2
RGD ID: 1550743
MGI Page MGI
Description: Predicted to enable disulfide oxidoreductase activity and identical protein binding activity. Predicted to be involved in brain development. Predicted to be located in endoplasmic reticulum membrane and mitochondrion. Predicted to be active in membrane-bounded organelle and mitochondria-associated endoplasmic reticulum membrane. Is expressed in several structures, including alimentary system; early conceptus; genitourinary system; hemolymphoid system; and nervous system. Orthologous to human TMX2 (thioredoxin related transmembrane protein 2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 2310042M24Rik; AA589631; MGC118019; thioredoxin domain containing 14; thioredoxin domain-containing protein 14; Txndc1; Txndc14
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: Gm5499  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39284,501,655 - 84,509,172 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl284,501,660 - 84,509,484 (-)EnsemblGRCm39 Ensembl
GRCm38284,671,311 - 84,678,828 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl284,671,316 - 84,679,140 (-)EnsemblGRCm38mm10GRCm38
MGSCv37284,511,474 - 84,518,204 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36284,472,156 - 84,478,886 (-)NCBIMGSCv36mm8
Celera286,266,245 - 86,272,957 (-)NCBICelera
Cytogenetic Map2DNCBI
cM Map249.45NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
brain development  (IBA,ISO)

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
5. Database resources of the National Center for Biotechnology Information. Wheeler DL, etal., Nucleic Acids Res 2001 Jan 1;29(1):11-6.
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:12477932   PMID:14610273   PMID:15782199   PMID:16141072   PMID:16141073   PMID:21267068   PMID:21873635  
PMID:24154525   PMID:24194600   PMID:24457600   PMID:28378742   PMID:30550785   PMID:32325033   PMID:32554809   PMID:32968282   PMID:36808153  


Genomics

Comparative Map Data
Tmx2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39284,501,655 - 84,509,172 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl284,501,660 - 84,509,484 (-)EnsemblGRCm39 Ensembl
GRCm38284,671,311 - 84,678,828 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl284,671,316 - 84,679,140 (-)EnsemblGRCm38mm10GRCm38
MGSCv37284,511,474 - 84,518,204 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36284,472,156 - 84,478,886 (-)NCBIMGSCv36mm8
Celera286,266,245 - 86,272,957 (-)NCBICelera
Cytogenetic Map2DNCBI
cM Map249.45NCBI
TMX2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381157,712,593 - 57,740,973 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1157,712,593 - 57,740,973 (+)EnsemblGRCh38hg38GRCh38
GRCh371157,480,065 - 57,508,445 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361157,236,618 - 57,265,020 (+)NCBINCBI36Build 36hg18NCBI36
Celera1154,836,522 - 54,865,161 (+)NCBICelera
Cytogenetic Map11q12.1NCBI
HuRef1153,828,920 - 53,857,079 (+)NCBIHuRef
CHM1_11157,346,866 - 57,375,482 (+)NCBICHM1_1
T2T-CHM13v2.01157,662,769 - 57,691,303 (+)NCBIT2T-CHM13v2.0
Tmx2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8390,161,628 - 90,169,278 (-)NCBIGRCr8
mRatBN7.2369,754,937 - 69,762,587 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl369,754,939 - 69,762,587 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx373,136,661 - 73,144,394 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0381,735,324 - 81,743,057 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0379,494,318 - 79,501,977 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0372,073,429 - 72,081,079 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl372,073,431 - 72,081,079 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0378,594,075 - 78,601,725 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4367,880,726 - 67,888,376 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1367,777,099 - 67,784,748 (-)NCBI
Celera369,110,620 - 69,118,270 (-)NCBICelera
Cytogenetic Map3q24NCBI
Tmx2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555112,632,507 - 2,638,763 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555112,632,434 - 2,641,531 (+)NCBIChiLan1.0ChiLan1.0
TMX2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2958,868,933 - 58,895,226 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11159,888,902 - 59,915,197 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01152,953,360 - 52,979,685 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11156,423,679 - 56,449,402 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1156,423,772 - 56,449,402 (+)Ensemblpanpan1.1panPan2
TMX2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11838,480,976 - 38,490,424 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1838,481,264 - 38,490,326 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1838,027,870 - 38,037,340 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01839,162,866 - 39,172,264 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1839,162,869 - 39,172,210 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11838,745,935 - 38,755,452 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01838,319,088 - 38,328,606 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01838,949,712 - 38,959,141 (-)NCBIUU_Cfam_GSD_1.0
Tmx2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494714,704,804 - 14,717,062 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365814,818,264 - 4,831,575 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365814,818,626 - 4,830,878 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TMX2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl213,230,463 - 13,241,088 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1213,230,461 - 13,241,270 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2212,863,472 - 12,874,171 (-)NCBISscrofa10.2Sscrofa10.2susScr3
TMX2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1115,489,471 - 15,515,722 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl115,490,195 - 15,515,687 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666038112,840,830 - 112,866,749 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tmx2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248643,016,499 - 3,020,755 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248643,016,499 - 3,020,762 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Tmx2
142 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1545
Count of miRNA genes:487
Interacting mature miRNAs:577
Transcripts:ENSMUST00000053664, ENSMUST00000111664, ENSMUST00000111665, ENSMUST00000123772, ENSMUST00000138529, ENSMUST00000152149
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301769Orgwq2_morgan weight QTL 2 (mouse)Not determined2388712693421651Mouse
1357881Estoq1_membryo survival total QTL 1 (mouse)Not determined220897778118894840Mouse
1357454Kidq1_mkidney weight QTL 1 (mouse)Not determined220897778118894840Mouse
1357436Splq1_mspleen weight QTL 1 (mouse)Not determined220897778118894840Mouse
39128209Lwq14_mliver weight QTL 14 (mouse)220897778118894840Mouse
1558899Egq1_mearly growth QTL 1 (mouse)Not determined220897778118894840Mouse
1558966W10q9_mweight 10 weeks QTL 9 (mouse)Not determined220897778118894840Mouse
1558915W3q1_mweight 3 weeks QTL 1 (mouse)Not determined220897778118894840Mouse
1558738W6q1_mweight 6 weeks QTL 1 (mouse)Not determined220897778118894840Mouse
1357681Hrtq1_mheart weight QTL 1 (mouse)Not determined220897778118894840Mouse
1302174Dssc2_mdextran sodium sulfate induced colitis QTL2 (mouse)Not determined224224632148700377Mouse
4141854T2dm2sa_mtype 2 diabetes mellitus 2 in SMXA RI mice (mouse)Not determined229307947148374934Mouse
4141236Hbnr5_mHeligmosomoides bakeri nematode resistance 5 (mouse)Not determined31214567105143570Mouse
1301109Dntcs2_mdental caries susceptibility 2 (mouse)Not determined240885493114910165Mouse
1301344Lith1_mlithogenic gene 1 (mouse)Not determined245347635145312647Mouse
10755526Lymph1_mlymphocyte differential 1 (mouse)25081931484819314Mouse
1300875Taste1_mtaste-saccharin preference 1 (mouse)Not determined25092317584923278Mouse
1300761Lgth1_mbody length 1 (mouse)Not determined25170327685703425Mouse
13464141Hbbcq3_mhemoglobin concentration QTL 3 (mouse)25244801986448136Mouse
13463471Hctq6_mhematocrit QTL 6 (mouse)25244801986448136Mouse
4141406Alpq2_malcohol preference QTL 2 (mouse)Not determined25752411791524288Mouse
12738429Lfibq18_mliver fibrosis QTL 18 (mouse)25791999191919991Mouse
1357577Trmq3_mT cell ratio modifier QTL 3 (mouse)Not determined260520612119355518Mouse
13824983Vclq1_mcurvilinear velocity QTL 1 (mouse)261830344136841920Mouse
10044002Hdl7_mHDL level 7 (mouse)Not determined26300595497006113Mouse
10053681Lith24_mlithogenic gene 24 (mouse)Not determined26300595497006113Mouse
1301405Etohr_methanol response acute (mouse)Not determined26300595497006113Mouse
1301703Bomd3_mbone mineral density 3 (mouse)Not determined26300595497006113Mouse
1300662Etohila_methanol induced locomotor activity (mouse)Not determined26300595497006113Mouse
1301048Actre2_mactivity response to ethanol 2 (mouse)Not determined26300595497006113Mouse
1301873Hsl1_mhyperoxia susceptibility locus 1 (mouse)Not determined26357015497570301Mouse
5491197Mobq5_mmultigenic obesity QTL 5 (mouse)Not determined265269746162518926Mouse
1301660Iba1_minduction of brown adipocytes 1 (mouse)Not determined267647887101648142Mouse
13463482Mchq17_mmean corpuscular hemoglobin QTL 17 (mouse)267647887101648142Mouse
1301882Etohc2_methanol consumption 2 (mouse)Not determined268724269102724407Mouse
1301948Elsgp3_melevated serum gp70 3 (mouse)Not determined268724269102724407Mouse
4142088Parms1_mpatched associated RMS 1 (mouse)Not determined74524117114123532Mouse
11528549Sluc31_msusceptibility to lung cancer 31 (mouse)274524117129213005Mouse
1301374Cplaq7_mcircadian period of locomotor activity 7 (mouse)Not determined276421483110421651Mouse
4141657Mohg1_mmodifier of hg 1 (mouse)Not determined276678758103095823Mouse
10043894Bw22_mbody weight QTL 22 (mouse)Not determined280895334114895334Mouse
15092054Egrme5_mearly growth rate, maternal effect 5 (mouse)282190187118004745Mouse
1558901Skmw8_mskeletal muscle weight 8 (mouse)Not determined284008488118008593Mouse
4141155Plast2b_mplasma plant sterol 2b (mouse)Not determined284013198148522175Mouse
10412082Hylaq1_mHyperlocomotor activity related QTL 1 (mouse)Not determined284013198148667470Mouse

Markers in Region
RH125025  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381787,078,433 - 87,078,807UniSTSGRCm38
MGSCv371787,477,773 - 87,478,147UniSTSGRCm37
Celera1791,455,777 - 91,456,151UniSTS
Cytogenetic Map17E4UniSTS
Cytogenetic Map2DUniSTS
UniSTS:493175  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381787,078,262 - 87,079,228UniSTSGRCm38
MGSCv371787,477,602 - 87,478,568UniSTSGRCm37
Celera1791,455,606 - 91,456,572UniSTS
Cytogenetic Map17E4UniSTS
Cytogenetic Map2DUniSTS


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000053664   ⟹   ENSMUSP00000059582
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl284,501,661 - 84,508,400 (-)Ensembl
GRCm38.p6 Ensembl284,671,317 - 84,678,056 (-)Ensembl
RefSeq Acc Id: ENSMUST00000111664   ⟹   ENSMUSP00000107293
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl284,501,660 - 84,508,462 (-)Ensembl
GRCm38.p6 Ensembl284,671,316 - 84,678,118 (-)Ensembl
RefSeq Acc Id: ENSMUST00000111665   ⟹   ENSMUSP00000107294
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl284,501,660 - 84,509,172 (-)Ensembl
GRCm38.p6 Ensembl284,671,316 - 84,678,828 (-)Ensembl
RefSeq Acc Id: ENSMUST00000123772
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl284,502,607 - 84,508,393 (-)Ensembl
GRCm38.p6 Ensembl284,672,263 - 84,678,049 (-)Ensembl
RefSeq Acc Id: ENSMUST00000138529
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl284,502,685 - 84,508,387 (-)Ensembl
GRCm38.p6 Ensembl284,672,341 - 84,678,043 (-)Ensembl
RefSeq Acc Id: ENSMUST00000152149   ⟹   ENSMUSP00000115745
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl284,506,450 - 84,509,484 (-)Ensembl
GRCm38.p6 Ensembl284,676,106 - 84,679,140 (-)Ensembl
RefSeq Acc Id: NM_001290751   ⟹   NP_001277680
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39284,501,655 - 84,508,518 (-)NCBI
GRCm38284,671,311 - 84,678,174 (-)NCBI
Celera286,266,239 - 86,273,738 (-)NCBI
Sequence:
RefSeq Acc Id: NM_025868   ⟹   NP_080144
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39284,501,655 - 84,509,172 (-)NCBI
GRCm38284,671,311 - 84,678,828 (-)NCBI
MGSCv37284,511,474 - 84,518,204 (-)RGD
Celera286,266,239 - 86,273,738 (-)NCBI
cM Map2 ENTREZGENE
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_080144   ⟸   NM_025868
- Peptide Label: isoform a precursor
- UniProtKB: Q8BW13 (UniProtKB/Swiss-Prot),   Q9D710 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001277680   ⟸   NM_001290751
- Peptide Label: isoform b
- UniProtKB: D3Z2J6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000107293   ⟸   ENSMUST00000111664
RefSeq Acc Id: ENSMUSP00000107294   ⟸   ENSMUST00000111665
RefSeq Acc Id: ENSMUSP00000115745   ⟸   ENSMUST00000152149
RefSeq Acc Id: ENSMUSP00000059582   ⟸   ENSMUST00000053664
Protein Domains
Thioredoxin

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9D710-F1-model_v2 AlphaFold Q9D710 1-295 view protein structure

Promoters
RGD ID:6833028
Promoter ID:MM_KWN:29998
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day1,   3T3L1_Day2,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000111664,   ENSMUST00000111665,   OTTMUST00000032637,   OTTMUST00000032647,   OTTMUST00000032648,   UC008KIX.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36284,518,061 - 84,518,561 (-)MPROMDB
RGD ID:6877792
Promoter ID:EPDNEW_M2347
Type:initiation region
Name:Tmx2_1
Description:Mus musculus thioredoxin-related transmembrane protein 2 , transcriptvariant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M2349  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38284,678,066 - 84,678,126EPDNEW
RGD ID:6877796
Promoter ID:EPDNEW_M2349
Type:initiation region
Name:Tmx2_2
Description:Mus musculus thioredoxin-related transmembrane protein 2 , transcriptvariant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M2347  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38284,678,845 - 84,678,905EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1914208 AgrOrtholog
Ensembl Genes ENSMUSG00000050043 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000053664.9 UniProtKB/Swiss-Prot
  ENSMUST00000111664 ENTREZGENE
  ENSMUST00000111664.8 UniProtKB/TrEMBL
  ENSMUST00000111665 ENTREZGENE
  ENSMUST00000111665.8 UniProtKB/Swiss-Prot
  ENSMUST00000152149.2 UniProtKB/TrEMBL
Gene3D-CATH Glutaredoxin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Thioredoxin-like_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Thioredoxin_domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TMX2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TMX2_thioredoxin_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:66958 UniProtKB/Swiss-Prot
MGD MGI:1914208 ENTREZGENE
NCBI Gene 66958 ENTREZGENE
PANTHER PTHR15853 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  THIOREDOXIN-RELATED TRANSMEMBRANE PROTEIN 2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Thioredoxin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Tmx2 PhenoGen
PROSITE THIOREDOXIN_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF52833 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt D3YYX0_MOUSE UniProtKB/TrEMBL
  D3Z2J6 ENTREZGENE, UniProtKB/TrEMBL
  Q8BW13 ENTREZGENE
  Q9D710 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary Q8BW13 UniProtKB/Swiss-Prot