Anapc7 (anaphase promoting complex subunit 7) - Rat Genome Database

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Gene: Anapc7 (anaphase promoting complex subunit 7) Mus musculus
Analyze
Symbol: Anapc7
Name: anaphase promoting complex subunit 7
RGD ID: 1323638
MGI Page MGI
Description: Predicted to enable enzyme-substrate adaptor activity and protein phosphatase binding activity. Predicted to be involved in several processes, including brain development; positive regulation of mitotic metaphase/anaphase transition; and protein K11-linked ubiquitination. Predicted to be located in nucleus and spindle. Predicted to be part of anaphase-promoting complex and heterochromatin. Is expressed in several structures, including brain; genitourinary system; liver; lung; and spleen. Used to study syndromic intellectual disability. Orthologous to human ANAPC7 (anaphase promoting complex subunit 7).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: anaphase-promoting complex subunit 7; AP; APC7; AW545589; cyclosome subunit 7; prediabetic NOD sera-reactive autoantigen
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395122,559,646 - 122,582,978 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5122,559,756 - 122,582,975 (+)EnsemblGRCm39 Ensembl
GRCm385122,422,444 - 122,444,912 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5122,421,693 - 122,444,912 (+)EnsemblGRCm38mm10GRCm38
MGSCv375122,872,453 - 122,894,921 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365122,683,098 - 122,705,196 (+)NCBIMGSCv36mm8
Celera5119,500,990 - 119,523,481 (+)NCBICelera
Cytogenetic Map5FNCBI
cM Map562.36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. MGDs mouse GO annotations MGD data from the GO Consortium
2. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
3. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10515598   PMID:10922056   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12477932   PMID:12904583   PMID:14610273   PMID:15102471  
PMID:15489334   PMID:15782199   PMID:15998744   PMID:16141072   PMID:16141073   PMID:16595651   PMID:18799693   PMID:20368287   PMID:21873635   PMID:22084091   PMID:22922362   PMID:32434143  
PMID:34321999   PMID:34942119   PMID:37875116  


Genomics

Comparative Map Data
Anapc7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395122,559,646 - 122,582,978 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5122,559,756 - 122,582,975 (+)EnsemblGRCm39 Ensembl
GRCm385122,422,444 - 122,444,912 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5122,421,693 - 122,444,912 (+)EnsemblGRCm38mm10GRCm38
MGSCv375122,872,453 - 122,894,921 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365122,683,098 - 122,705,196 (+)NCBIMGSCv36mm8
Celera5119,500,990 - 119,523,481 (+)NCBICelera
Cytogenetic Map5FNCBI
cM Map562.36NCBI
ANAPC7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3812110,372,900 - 110,403,708 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl12110,372,900 - 110,403,730 (-)EnsemblGRCh38hg38GRCh38
GRCh3712110,810,705 - 110,841,513 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3612109,296,332 - 109,325,815 (-)NCBINCBI36Build 36hg18NCBI36
Build 3412109,274,668 - 109,304,152NCBI
Celera12110,436,800 - 110,468,040 (-)NCBICelera
Cytogenetic Map12q24.11NCBI
HuRef12107,829,309 - 107,860,504 (-)NCBIHuRef
CHM1_112110,778,517 - 110,809,364 (-)NCBICHM1_1
T2T-CHM13v2.012110,350,557 - 110,381,372 (-)NCBIT2T-CHM13v2.0
Anapc7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81239,793,518 - 39,821,614 (-)NCBIGRCr8
mRatBN7.21234,131,214 - 34,160,819 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1234,133,429 - 34,160,005 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1235,305,959 - 35,333,235 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01235,917,387 - 35,944,658 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01234,969,698 - 34,996,973 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01239,613,898 - 39,641,999 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1239,614,733 - 39,641,285 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01241,493,496 - 41,521,596 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41235,327,644 - 35,354,839 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11235,191,632 - 35,217,554 (-)NCBI
Celera1235,804,628 - 35,831,847 (-)NCBICelera
Cytogenetic Map12q16NCBI
Anapc7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554827,302,455 - 7,328,145 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554827,302,853 - 7,328,145 (-)NCBIChiLan1.0ChiLan1.0
ANAPC7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v210118,438,263 - 118,469,981 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan112118,434,665 - 118,466,384 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v012107,946,756 - 107,977,489 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.112111,338,045 - 111,368,480 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl12111,338,045 - 111,368,466 (-)Ensemblpanpan1.1panPan2
ANAPC7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1268,223,627 - 8,247,976 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl268,223,616 - 8,247,976 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha268,387,801 - 8,411,922 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0268,481,772 - 8,505,938 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl268,481,772 - 8,505,947 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1268,441,423 - 8,465,552 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0268,499,836 - 8,523,967 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0268,456,732 - 8,481,089 (-)NCBIUU_Cfam_GSD_1.0
Anapc7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118156,088,129 - 156,113,690 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365583,363,807 - 3,391,438 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365583,365,729 - 3,391,292 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ANAPC7
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1431,763,243 - 31,789,750 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11431,744,729 - 31,789,750 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21433,692,333 - 33,718,027 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ANAPC7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.111105,612,881 - 105,640,147 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666037139,480,089 - 139,508,447 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Anapc7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474721,473,352 - 21,499,843 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474721,473,337 - 21,501,348 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Anapc7
515 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1497
Count of miRNA genes:635
Interacting mature miRNAs:776
Transcripts:ENSMUST00000031422, ENSMUST00000119792, ENSMUST00000122010, ENSMUST00000148266, ENSMUST00000154074
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
11341716Rvfs3_mRift Valley fever susceptibility 3 (mouse)526441234138455402Mouse
4142064Tmc1m4_mTmc1 modifier 4 (mouse)Not determined554500177127001072Mouse
26884395Humsd2_mhumerus midshaft diameter 2, 10 week (mouse)570057343132528839Mouse
27226719Tibw6_mtibia width 6, proximal, 16 week (mouse)572857343139985755Mouse
25314315Mlh1fc4_mMLH1 foci count 4 (mouse)574460661132528839Mouse
13506928Recrq8_mrecombination rate in male meiosis QTL 8 (mouse)574460661132528839Mouse
1300968Skts4_mskin tumor susceptibility 4 (mouse)Not determined589418876124238239Mouse
1301362Prnr1_mprion resistance 1 (mouse)Not determined589418876146787935Mouse
11049562Lmr24f_mleishmaniasis resistance 24f (mouse)590320962124321041Mouse
1301457Cfsw2_mcystic fibrosis survival to weaning 2 (mouse)Not determined590561006124561151Mouse
1300993Hycdc_mhypercapnic duty cycle (mouse)Not determined590561006124561151Mouse
9587780Afw16_mabdominal fat weight QTL 16 (mouse)Not determined592830166126830285Mouse
1301974Chab7_mcholesterol absorption 7 (mouse)Not determined595233214129233330Mouse
1357644Egrd1_mearly growth rate, direct effect 1 (mouse)Not determined595434580129434786Mouse
10402486Dipa1_mdrug induced psychomotor activation 1 (mouse)Not determined595465549129465722Mouse
13464244Ahl19_mage related hearing loss, early onset 19 (mouse)595465549129465722Mouse
1558774Lith17_mlithogenic gene 17 (mouse)Not determined595465549129465722Mouse
1300940Actd3_mactivity-distance traveled 3 (mouse)Not determined596320385130320533Mouse
1300659Pcd8ts1_mp-glycoprotein positive CD8 T cell subset 1 (mouse)Not determined597021753131021986Mouse
1301858Smdq1_msegregation of mitochondrial DNA QTL 1 (mouse)Not determined597021753131021986Mouse
4141519Hmtb5_mhemostasis and thrombosis bleeding time 5 (mouse)Not determined99949422126882944Mouse
12904945Tammq2_mtibialis anterior muscle mass QTL 2 (mouse)5100665965134665965Mouse
12904959Smmq1_msoleus muscle mass QTL 1 (mouse)5100665965134665965Mouse
12859290Criq2_mCitrobacter rodentium infection QTL 2 (mouse)5101332579135332579Mouse
1301624Aevm2_mautoimmune extremity vasculitis in MRL mice 2 (mouse)Not determined5101863832135864028Mouse
14746986Manh58_mmandible shape 58 (mouse)5102446283136446283Mouse
11532736Sluc33b_msusceptibility to lung cancer 33b (mouse)5102945037136945196Mouse
10412202Bbaa26_mB.burgdorferi-associated arthritis 26 (mouse)Not determined5104583688138555455Mouse
10412239Alpq7_malcohol preference QTL 7 (mouse)Not determined5104705939138705939Mouse
10043890Trigq4_mtriglyceride QTL 4 (mouse)Not determined5107906299141906412Mouse
4142473Chlq11_mcirculating hormone level QTL 11 (mouse)Not determined5107906299141906412Mouse
13464243Ahl20_mage related hearing loss, early onset 20 (mouse)5107906299141906412Mouse
4141139Hmtb4_mhemostasis and thrombosis rebleeding time 4 (mouse)Not determined108762509126882944Mouse
10412197Bbaa25_mB.burgdorferi-associated arthritis 25 (mouse)Not determined5109167240143167381Mouse
13464251Ahl21_mage related hearing loss, early onset 21 (mouse)5109167240143167381Mouse
1301543Hypch_mhypercholesterolemia (mouse)Not determined5109238624139118905Mouse
1300913Bwefm_mbody weight females and males day 10 (mouse)Not determined5109439348143439459Mouse
1301102Cia14_mcollagen induced arthritis 14 (mouse)Not determined5113320385138555455Mouse
1357662Lprq4_mlipoprotein QTL 4 (mouse)Not determined5114021753129632606Mouse
1301226Bbaa2_mB.burgdorferi-associated arthritis 2 (mouse)Not determined5115156883149157015Mouse
1300827Cora1_mcorrelation in cytokine production 1 (mouse)Not determined5115156883149157015Mouse
1301857Bglq14_mbody growth late QTL 14 (mouse)Not determined5118948964151758149Mouse
10412191Bbaa24_mB.burgdorferi-associated arthritis 24 (mouse)Not determined5119945037141700466Mouse
4141081Nidd7k_mNidd7 on KK-A (mouse)Not determined119945037149347326Mouse
11528552Scram1_mspinal cord resistance to astrocytoma modifier 1 (mouse)5121455402151758149Mouse
1301986Bpq4_mblood pressure QTL 4 (mouse)Not determined5121555236151758149Mouse

Markers in Region
AW742619  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm385122,439,396 - 122,440,217UniSTSGRCm38
MGSCv375122,889,405 - 122,890,226UniSTSGRCm37
Celera5119,517,965 - 119,518,786UniSTS
Cytogenetic Map5FUniSTS
Whitehead/MRC_RH51493.86UniSTS
AW545589  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm385122,444,134 - 122,444,240UniSTSGRCm38
MGSCv375122,894,143 - 122,894,249UniSTSGRCm37
Celera5119,522,703 - 119,522,809UniSTS
Cytogenetic Map5FUniSTS
Whitehead/MRC_RH51493.68UniSTS
UniSTS:224701  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm385122,422,571 - 122,422,690UniSTSGRCm38
MGSCv375122,872,580 - 122,872,699UniSTSGRCm37
Celera5119,501,117 - 119,501,236UniSTS
Cytogenetic Map5FUniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_019805 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036165328 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC113285 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF076607 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK030775 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK049968 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK137286 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK150764 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK150891 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK153114 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK159523 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK164202 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK181331 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK188802 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC006635 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY128328 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466529 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000031422   ⟹   ENSMUSP00000031422
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5122,560,507 - 122,582,975 (+)Ensembl
GRCm38.p6 Ensembl5122,422,444 - 122,444,912 (+)Ensembl
RefSeq Acc Id: ENSMUST00000119792   ⟹   ENSMUSP00000112658
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5122,560,544 - 122,581,497 (+)Ensembl
GRCm38.p6 Ensembl5122,422,481 - 122,443,434 (+)Ensembl
RefSeq Acc Id: ENSMUST00000122010   ⟹   ENSMUSP00000113928
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5122,559,756 - 122,582,975 (+)Ensembl
GRCm38.p6 Ensembl5122,421,693 - 122,444,912 (+)Ensembl
RefSeq Acc Id: ENSMUST00000148266
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5122,577,437 - 122,578,548 (+)Ensembl
GRCm38.p6 Ensembl5122,439,374 - 122,440,485 (+)Ensembl
RefSeq Acc Id: ENSMUST00000154074   ⟹   ENSMUSP00000123365
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5122,579,438 - 122,579,845 (+)Ensembl
GRCm38.p6 Ensembl5122,441,375 - 122,441,782 (+)Ensembl
RefSeq Acc Id: ENSMUST00000197993
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5122,578,202 - 122,579,866 (+)Ensembl
GRCm38.p6 Ensembl5122,440,139 - 122,441,803 (+)Ensembl
RefSeq Acc Id: NM_019805   ⟹   NP_062779
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395122,560,544 - 122,582,978 (+)NCBI
GRCm385122,422,444 - 122,444,912 (+)ENTREZGENE
MGSCv375122,872,453 - 122,894,921 (+)RGD
Celera5119,500,990 - 119,523,481 (+)RGD
cM Map5 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_036165328   ⟹   XP_036021221
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395122,559,646 - 122,582,517 (+)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_062779   ⟸   NM_019805
- UniProtKB: Q8BSR2 (UniProtKB/Swiss-Prot),   Q3UBM7 (UniProtKB/Swiss-Prot),   Q91W13 (UniProtKB/Swiss-Prot),   Q9WVM3 (UniProtKB/Swiss-Prot),   D3YU58 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000112658   ⟸   ENSMUST00000119792
RefSeq Acc Id: ENSMUSP00000031422   ⟸   ENSMUST00000031422
RefSeq Acc Id: ENSMUSP00000123365   ⟸   ENSMUST00000154074
RefSeq Acc Id: ENSMUSP00000113928   ⟸   ENSMUST00000122010
RefSeq Acc Id: XP_036021221   ⟸   XM_036165328
- Peptide Label: isoform X1
- UniProtKB: Q9WVM3 (UniProtKB/Swiss-Prot),   Q8BSR2 (UniProtKB/Swiss-Prot),   Q3UBM7 (UniProtKB/Swiss-Prot),   Q91W13 (UniProtKB/Swiss-Prot),   D3YU58 (UniProtKB/TrEMBL)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9WVM3-F1-model_v2 AlphaFold Q9WVM3 1-565 view protein structure

Promoters
RGD ID:6888004
Promoter ID:EPDNEW_M7440
Type:initiation region
Name:Anapc7_1
Description:Mus musculus anaphase promoting complex subunit 7 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm385122,422,482 - 122,422,542EPDNEW
RGD ID:6837075
Promoter ID:MM_KWN:43956
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney
Transcripts:ENSMUST00000122010
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv365122,870,471 - 122,870,971 (+)MPROMDB
RGD ID:6837076
Promoter ID:MM_KWN:43957
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Lung,   MEF_B4
Transcripts:ENSMUST00000119792,   NM_019805
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv365122,872,199 - 122,872,699 (+)MPROMDB
RGD ID:6837093
Promoter ID:MM_KWN:43958
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lung
Transcripts:OTTMUST00000066106,   OTTMUST00000066109
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv365122,889,336 - 122,889,836 (+)MPROMDB
RGD ID:6837077
Promoter ID:MM_KWN:43959
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lung
Transcripts:OTTMUST00000066110
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv365122,891,136 - 122,891,636 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1929711 AgrOrtholog
Ensembl Genes ENSMUSG00000029466 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000031422 ENTREZGENE
  ENSMUST00000031422.10 UniProtKB/Swiss-Prot
  ENSMUST00000119792.2 UniProtKB/TrEMBL
  ENSMUST00000122010.8 UniProtKB/Swiss-Prot
  ENSMUST00000154074.2 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro TPR-like_helical_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TPR_repeat UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:56317 UniProtKB/Swiss-Prot
MGD MGI:1929711 ENTREZGENE
NCBI Gene 56317 ENTREZGENE
PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 7 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CELL DIVISION CYCLE 16,23,27 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam TPR_16 UniProtKB/Swiss-Prot
  TPR_8 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Anapc7 PhenoGen
PROSITE TPR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TPR_REGION UniProtKB/Swiss-Prot
SMART TPR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF48452 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt APC7_MOUSE UniProtKB/Swiss-Prot
  D3YU58 ENTREZGENE, UniProtKB/TrEMBL
  F6WXH0_MOUSE UniProtKB/TrEMBL
  Q3UBM7 ENTREZGENE
  Q8BSR2 ENTREZGENE
  Q91W13 ENTREZGENE
  Q9WVM3 ENTREZGENE
UniProt Secondary Q3UBM7 UniProtKB/Swiss-Prot
  Q8BSR2 UniProtKB/Swiss-Prot
  Q91W13 UniProtKB/Swiss-Prot