Fxr1 (FMR1 autosomal homolog 1) - Rat Genome Database

Name: Fxr1
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: Fxr1 (FMR1 autosomal homolog 1) Mus musculus

Analyze

Symbol:

Fxr1

Name:

FMR1 autosomal homolog 1

RGD ID:

1323343

MGI Page

MGI

Description:

Enables mRNA 3'-UTR AU-rich region binding activity; molecular condensate scaffold activity; and ribonucleoprotein complex binding activity. Involved in several processes, including dentate gyrus development; modulation of chemical synaptic transmission; and regulation of gene expression. Located in several cellular components, including costamere; dendritic spine; and ribosome. Is active in several cellular components, including glutamatergic synapse; intracellular non-membrane-bounded organelle; and postsynapse. Is expressed in several structures, including central nervous system; gut; heart; musculature; and sensory organ. Human ortholog(s) of this gene implicated in congenital myopathy 9A and congenital myopathy 9B. Orthologous to human FXR1 (FMR1 autosomal homolog 1).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

1110050J02Rik; 9530073J07Rik; AI851072; expressed sequence AI851072; fragile X mental retardation gene 1, autosomal homolog; fragile X mental retardation gene, autosomal homolog; fragile X mental retardation syndrome-related protein 1; fragile X mental retardation-related protein 1; fragile-X-related protein 1; Fxr; Fxr1h; Fxr1p; mFxr1p; RNA-binding protein FXR1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	FXR1 (FMR1 autosomal homolog 1)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):	Fxr1 (FMR1 autosomal homolog 1)	RGD	RGD
Chinchilla lanigera (long-tailed chinchilla):	Fxr1 (FMR1 autosomal homolog 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	FXR1 (FMR1 autosomal homolog 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	FXR1 (FMR1 autosomal homolog 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Fxr1 (FMR1 autosomal homolog 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	FXR1 (FMR1 autosomal homolog 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	FXR1 (FMR1 autosomal homolog 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Fxr1 (FMR1 autosomal homolog 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	FXR2 (FMR1 autosomal homolog 2)	HGNC	OrthoMCL
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Fxr1 (FMR1 autosomal homolog 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	FXR1 (FMR1 autosomal homolog 1)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	fxr1 (fragile X mental retardation, autosomal homolog 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid\|ZFIN)
Drosophila melanogaster (fruit fly):	Fmr1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	T10E9.14	Alliance	DIOPT (OrthoFinder\|PhylomeDB)
Xenopus tropicalis (tropical clawed frog):	fxr1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Related Pseudogenes:

Gm17795

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	34,074,133 - 34,124,129 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	34,074,092 - 34,124,471 (+)	Ensembl		GRCm39 Ensembl
GRCm38	3	34,020,058 - 34,069,980 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	34,019,943 - 34,070,322 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	3	33,919,001 - 33,968,267 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	3	34,211,657 - 34,260,887 (+)	NCBI		MGSCv36	mm8
Celera	3	33,916,172 - 33,965,473 (+)	NCBI		Celera
Cytogenetic Map	3	A3	NCBI
cM Map	3	16.41	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

3-methylglutaconic aciduria type 5 (ISO)

congenital myopathy (ISO)

congenital myopathy 1B (ISO)

congenital myopathy 9A (ISO)

congenital myopathy 9B (ISO)

Currarino syndrome (ISO)

genetic disease (ISO)

intellectual disability (ISO)

scoliosis (ISO)

syndromic microphthalmia 3 (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dichloroethane (EXP)

1,2-dimethylhydrazine (EXP)

17alpha-ethynylestradiol (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,3,7,8-Tetrachlorodibenzofuran (ISO)

2,4,6-tribromophenol (ISO)

2,6-dinitrotoluene (ISO)

2-hydroxypropanoic acid (ISO)

2-methylcholine (ISO)

3,3',5,5'-tetrabromobisphenol A (ISO)

4,4'-sulfonyldiphenol (ISO)

acrylamide (ISO)

amphotericin B (ISO)

aristolochic acid A (ISO)

Aroclor 1254 (EXP)

arsane (ISO)

arsenic atom (ISO)

benzo[a]pyrene (EXP)

benzo[a]pyrene diol epoxide I (ISO)

bisphenol A (ISO)

Brodifacoum (ISO)

caffeine (ISO)

carbon nanotube (EXP)

cisplatin (EXP)

cobalt dichloride (ISO)

copper(II) sulfate (ISO)

coumarin (ISO)

decabromodiphenyl ether (ISO)

dicrotophos (ISO)

dieldrin (ISO)

dioxygen (EXP)

dorsomorphin (ISO)

doxorubicin (ISO)

elemental selenium (ISO)

entinostat (ISO)

enzyme inhibitor (ISO)

ethanol (EXP,ISO)

finasteride (ISO)

flutamide (ISO)

folic acid (EXP)

FR900359 (ISO)

furan (ISO)

glafenine (ISO)

glufosinate (EXP)

hydrogen peroxide (EXP,ISO)

ivermectin (ISO)

methylmercury chloride (ISO)

Monobutylphthalate (ISO)

N-methyl-4-phenylpyridinium (EXP)

nefazodone (ISO)

paracetamol (EXP,ISO)

phenethyl isothiocyanate (ISO)

pirinixic acid (EXP)

potassium dichromate (ISO)

quercetin (ISO)

rac-lactic acid (ISO)

resveratrol (ISO)

SB 431542 (ISO)

selenium atom (ISO)

silver atom (ISO)

silver(0) (ISO)

sodium arsenate (EXP)

sodium arsenite (ISO)

testosterone enanthate (ISO)

tetrachloromethane (EXP)

titanium dioxide (EXP)

triptonide (EXP)

troglitazone (EXP)

urethane (ISO)

valproic acid (ISO)

vinclozolin (ISO)

vitamin E (ISO)

zinc atom (ISO)

zinc(0) (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

animal organ development (IBA)

cell differentiation (IEA)

dentate gyrus development (IMP)

mRNA destabilization (ISO)

mRNA transport (IBA)

muscle organ development (IDA,IMP,ISO)

negative regulation of inflammatory response (ISO)

negative regulation of long-term synaptic potentiation (IMP)

negative regulation of mRNA catabolic process (ISO)

negative regulation of translation (IDA)

negative regulation of tumor necrosis factor production (IDA)

non-membrane-bounded organelle assembly (IDA)

nuclear pore complex assembly (ISO)

nuclear pore localization (ISO)

positive regulation of long-term neuronal synaptic plasticity (IBA)

positive regulation of miRNA-mediated gene silencing (ISO)

positive regulation of translation (IBA,IDA,ISO)

post-transcriptional regulation of gene expression (IDA,IMP)

regulation of circadian sleep/wake cycle, sleep (IMP)

regulation of mRNA stability (IBA)

regulation of neurogenesis (IDA)

regulation of synaptic transmission, glutamatergic (IMP)

regulation of translation (IEA)

regulation of translation at presynapse, modulating synaptic transmission (IBA)

skeletal muscle organ development (IDA,ISO)

spermatid development (IDA)

spermatogenesis (IEA)

Cellular Component

axon (IDA)

cell projection (IEA)

costamere (IDA)

cytoplasm (IDA,ISO)

cytoplasmic ribonucleoprotein granule (ISO)

cytoplasmic stress granule (IBA,ISO)

cytosol (IDA,ISO)

dendrite (IDA)

dendritic spine (IDA)

glutamatergic synapse (IDA)

intracellular non-membrane-bounded organelle (IDA)

neuron projection (IBA)

nuclear envelope (ISO)

nucleus (IBA,IDA)

perinuclear region of cytoplasm (IDA)

postsynapse (IDA)

ribonucleoprotein granule (IDA)

ribosome (IDA)

synapse (IEA)

Molecular Function

molecular condensate scaffold activity (IDA)

mRNA 3'-UTR AU-rich region binding (IDA,ISO)

mRNA 3'-UTR binding (IBA,ISO)

mRNA binding (IDA)

nucleic acid binding (IEA)

protein binding (IPI)

protein heterodimerization activity (ISO)

protein homodimerization activity (ISO)

ribonucleoprotein complex binding (IDA)

RNA binding (ISO)

RNA strand annealing activity (ISO)

translation regulator activity (IBA)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

abnormal gait (IAGP)

abnormal muscle development (IAGP)

abnormal myocardial fiber morphology (IAGP)

abnormal skin vasculature morphology (IAGP)

decreased grip strength (IAGP)

disorganized myocardium (IAGP)

neonatal lethality, complete penetrance (IAGP)

postnatal growth retardation (IAGP)

premature death (IAGP)

short stride length (IAGP)

small heart (IAGP)

small lung (IAGP)

small spleen (IAGP)

small testis (IAGP)

References

References - curated

#	Reference Title	Reference Citation
1.	Functional annotation of a full-length mouse cDNA collection.	Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2.	MGDs mouse GO annotations	MGD data from the GO Consortium
3.	MGD IEA	MGD IEA
4.	Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.	Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5.	Mouse MP Annotation Import Pipeline	RGD automated import pipeline
6.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:8634689	PMID:8889548	PMID:10349636	PMID:10409431	PMID:10567518	PMID:10922068	PMID:11042159	PMID:11076861	PMID:11178106	PMID:11438699	PMID:11544199	PMID:11735223
PMID:12477932	PMID:12520002	PMID:12581522	PMID:12904583	PMID:14610273	PMID:15128702	PMID:15489334	PMID:15548538	PMID:15782199	PMID:16000371	PMID:16033648	PMID:16141072
PMID:16141073	PMID:16602821	PMID:16930510	PMID:17170008	PMID:17868361	PMID:17967808	PMID:18589395	PMID:18790697	PMID:18799693	PMID:19075228	PMID:19487368	PMID:20491901
PMID:20530197	PMID:20975687	PMID:21589869	PMID:21659647	PMID:21677750	PMID:21873635	PMID:21957233	PMID:22022532	PMID:23555284	PMID:24069363	PMID:24457600	PMID:25313962
PMID:25456134	PMID:26240334	PMID:26265008	PMID:26586428	PMID:27770568	PMID:28204491	PMID:28378742	PMID:28671696	PMID:28855249	PMID:29101288	PMID:29142209	PMID:29730159
PMID:30067974	PMID:30196744	PMID:30397356	PMID:30457570	PMID:30770808	PMID:30803859	PMID:31040226	PMID:31138677	PMID:31146259	PMID:31330130	PMID:31407019	PMID:32098917
PMID:32325033	PMID:32328638	PMID:32434143	PMID:32581705	PMID:32597038	PMID:32893934	PMID:33601422	PMID:33863995	PMID:34133714	PMID:34255829	PMID:35012549	PMID:35289490
PMID:35951695	PMID:37043351	PMID:37080662	PMID:37083155	PMID:37216506

Genomics

Comparative Map Data

Fxr1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	34,074,133 - 34,124,129 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	34,074,092 - 34,124,471 (+)	Ensembl		GRCm39 Ensembl
GRCm38	3	34,020,058 - 34,069,980 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	34,019,943 - 34,070,322 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	3	33,919,001 - 33,968,267 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	3	34,211,657 - 34,260,887 (+)	NCBI		MGSCv36	mm8
Celera	3	33,916,172 - 33,965,473 (+)	NCBI		Celera
Cytogenetic Map	3	A3	NCBI
cM Map	3	16.41	NCBI

FXR1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	180,912,670 - 180,982,753 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	180,868,141 - 180,982,753 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	3	180,630,458 - 180,700,541 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	182,113,146 - 182,177,644 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	3	182,113,163 - 182,177,036	NCBI
Celera	3	179,062,664 - 179,132,978 (+)	NCBI		Celera
Cytogenetic Map	3	q26.33	NCBI
HuRef	3	178,034,321 - 178,104,537 (+)	NCBI		HuRef
CHM1_1	3	180,593,505 - 180,663,825 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	3	183,714,436 - 183,784,535 (+)	NCBI		T2T-CHM13v2.0

Fxr1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	118,812,287 - 118,865,813 (+)	NCBI		GRCr8
mRatBN7.2	2	116,884,167 - 116,937,590 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	116,884,248 - 116,937,590 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	123,473,867 - 123,526,115 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	121,586,534 - 121,638,784 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	116,215,601 - 116,266,541 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	120,529,716 - 120,570,356 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	120,512,899 - 120,570,355 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	140,165,289 - 140,213,149 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	120,330,045 - 120,378,482 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	2	120,275,008 - 120,323,418 (+)	NCBI
Celera	2	111,923,546 - 111,975,799 (+)	NCBI		Celera
Cytogenetic Map	2	q24	NCBI

Fxr1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955420	9,903,736 - 9,966,100 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955420	9,903,736 - 9,966,100 (+)	NCBI	ChiLan1.0	ChiLan1.0

FXR1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	178,783,206 - 178,848,482 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	178,787,916 - 178,853,817 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	177,948,040 - 178,012,705 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	186,119,331 - 186,187,126 (+)	NCBI	panpan1.1	PanPan1.1	panPan2

FXR1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	34	14,129,978 - 14,192,016 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	34	14,130,017 - 14,191,370 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	34	18,212,277 - 18,274,019 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	34	14,031,339 - 14,093,392 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	34	14,031,378 - 14,093,391 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	34	14,077,460 - 14,139,011 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	34	14,059,493 - 14,121,524 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	34	14,303,530 - 14,365,583 (+)	NCBI		UU_Cfam_GSD_1.0

Fxr1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	110,795,745 - 110,866,441 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936566	2,354,441 - 2,425,176 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936566	2,354,301 - 2,425,140 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

FXR1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	118,839,338 - 118,900,136 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	118,839,314 - 118,899,804 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	128,089,495 - 128,175,102 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

FXR1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	15	8,420,789 - 8,486,681 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	15	8,421,654 - 8,486,384 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666063	17,252,536 - 17,318,234 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Fxr1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624730	58,680,030 - 58,743,229 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624730	58,679,945 - 58,743,688 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Fxr1
1688 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	148
Count of miRNA genes:	85
Interacting mature miRNAs:	88
Transcripts:	ENSMUST00000001620, ENSMUST00000167354
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
26884436	Zlq3_m	zygomatic length QTL 3, 10 week (mouse)					3	3265060	142405761	Mouse
1300559	Thypr3_m	thymocyte proliferative response 3 (mouse)			Not determined		3	4525419	38525519	Mouse
1558925	Hivan1_m	HIV-associated nephropathy 1 (mouse)			Not determined		3	7586174	68716946	Mouse
4142399	Aec1_m	autoimmune exocrinopathy 1 (mouse)			Not determined			7586174	102690034	Mouse
4141116	Lgaq4_m	late growth adjusted QTL 4 (mouse)			Not determined			10249221	83184946	Mouse
4141255	W10q3_m	weight 10 weeks QTL 3 (mouse)			Not determined			10249221	83184946	Mouse
4141563	Lgq3_m	late growth QTL 3 (mouse)			Not determined			10249221	83184946	Mouse
39128206	Lwq18_m	liver weight QTL 18 (mouse)					3	10249221	83184946	Mouse
1357584	Splq6_m	spleen weight QTL 6 (mouse)			Not determined		3	10249221	83184946	Mouse
1357440	Hrtpq1_m	heart weight percentage QTL 1 (mouse)			Not determined		3	10249221	83184946	Mouse
1301358	Eae20_m	experimental allergic encephalomyelitis 20 (mouse)			Not determined		3	11630453	45630591	Mouse
26884427	Cvht4_m	cranial vault height 4, 10 week (mouse)					3	16054164	109707316	Mouse
13207570	Tcq12_m	total cholesterol QTL 12 (mouse)					3	16504164	130163649	Mouse
4142092	Tgq13_m	triglyceride QTL 13 (mouse)			Not determined			18288168	52288168	Mouse
1301114	Ssial2_m	susceptibility to sialadenitis 2 (mouse)			Not determined		3	20174862	54180103	Mouse
26884422	Cvht7_m	cranial vault height 7, 16 week (mouse)					3	28954149	118893649	Mouse
1302056	Orgwq4_m	organ weight QTL 4 (mouse)			Not determined		3	30067588	147304689	Mouse
1300961	Bh4p_m	bar holding four paws (mouse)			Not determined		3	31837854	65837997	Mouse
12910778	Pwgrq13_m	post-weaning growth rate QTL 13 (mouse)					3	32635760	58017363	Mouse
12910781	Pwgrq12_m	post-weaning growth rate QTL 12 (mouse)					3	32635760	58017363	Mouse
1357689	Mdmsc1_m	modifier of muscularity 1 (mouse)			Not determined		3	33327201	45916479	Mouse
10412073	Ssen2_m	suseptibility to Sendai virus 2 (mouse)			Not determined		3	33535465	67535615	Mouse
9587784	Afw13_m	abdominal fat weight QTL 13 (mouse)			Not determined		3	33752045	67752228	Mouse
10043882	Bwtq13_m	body weight QTL 13 (mouse)			Not determined		3	33752045	67752228	Mouse

Markers in Region

AI851072

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	3	34,065,377 - 34,065,457	UniSTS	GRCm38
MGSCv37	3	33,964,299 - 33,964,379	UniSTS	GRCm37
Celera	3	33,961,505 - 33,961,585	UniSTS
Cytogenetic Map	3	B	UniSTS
Whitehead/MRC_RH	3	351.46	UniSTS

AA959924

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	3	34,056,218 - 34,056,357	UniSTS	GRCm38
MGSCv37	3	33,955,140 - 33,955,279	UniSTS	GRCm37
Celera	3	33,952,385 - 33,952,524	UniSTS
Cytogenetic Map	3	B	UniSTS
Whitehead/MRC_RH	3	356.42	UniSTS

Fxr1h

Mouse Assembly	Chr	Position (strand)	Source
Cytogenetic Map	3	B	UniSTS
cM Map	3		UniSTS
cM Map	3		UniSTS

X90875

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	10	40,565,798 - 40,565,956	UniSTS	GRCm38
GRCm38	3	34,069,047 - 34,069,205	UniSTS	GRCm38
MGSCv37	10	40,285,604 - 40,285,762	UniSTS	GRCm37
MGSCv37	3	33,967,969 - 33,968,127	UniSTS	GRCm37
Celera	10	41,455,316 - 41,455,474	UniSTS
Celera	3	33,965,175 - 33,965,333	UniSTS
Cytogenetic Map	3	B	UniSTS
Whitehead_YAC	3		UniSTS

BI274570

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	3	34,068,206 - 34,069,074	UniSTS	GRCm38
MGSCv37	3	33,967,128 - 33,967,996	UniSTS	GRCm37
Celera	3	33,964,334 - 33,965,202	UniSTS
Cytogenetic Map	3	B	UniSTS

Fxr1h

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
Cytogenetic Map	3	B	UniSTS
cM Map	3		UniSTS

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001113188	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001113189	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001428474	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001428475	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001428476	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_008053	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006535400	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006535401	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006535402	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_036162895	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_036162896	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_036162897	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AA080092	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC068294	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC115078	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF124385	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AH007702	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK004220	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK020641	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK049231	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK177421	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK178268	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK180674	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK198118	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC019139	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BE634703	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CB196254	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CF170707	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466530	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CJ086949	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	X90875	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSMUST00000001620 ⟹ ENSMUSP00000001620

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	3	34,074,092 - 34,123,491 (+)	Ensembl
GRCm38.p6 Ensembl	3	34,019,943 - 34,069,342 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000167354 ⟹ ENSMUSP00000130216

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	3	34,074,247 - 34,123,486 (+)	Ensembl
GRCm38.p6 Ensembl	3	34,020,098 - 34,069,337 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000196519

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	3	34,093,680 - 34,095,813 (+)	Ensembl
GRCm38.p6 Ensembl	3	34,039,531 - 34,041,664 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000197694 ⟹ ENSMUSP00000142441

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	3	34,074,257 - 34,123,494 (+)	Ensembl
GRCm38.p6 Ensembl	3	34,020,108 - 34,069,345 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000197853 ⟹ ENSMUSP00000143614

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	3	34,093,683 - 34,100,686 (+)	Ensembl
GRCm38.p6 Ensembl	3	34,039,534 - 34,046,537 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000198051 ⟹ ENSMUSP00000142847

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	3	34,074,254 - 34,123,494 (+)	Ensembl
GRCm38.p6 Ensembl	3	34,020,105 - 34,069,345 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000200086 ⟹ ENSMUSP00000143562

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	3	34,074,247 - 34,123,520 (+)	Ensembl
GRCm38.p6 Ensembl	3	34,020,098 - 34,069,371 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000200392 ⟹ ENSMUSP00000143392

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	3	34,074,257 - 34,124,471 (+)	Ensembl
GRCm38.p6 Ensembl	3	34,020,108 - 34,070,322 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000200425

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	3	34,100,781 - 34,103,264 (+)	Ensembl
GRCm38.p6 Ensembl	3	34,046,632 - 34,049,115 (+)	Ensembl

RefSeq Acc Id:

NM_001113188 ⟹ NP_001106659

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	3	34,074,247 - 34,123,489 (+)	NCBI
GRCm38	3	34,020,079 - 34,069,345 (+)	NCBI
MGSCv37	3	33,919,001 - 33,968,267 (+)	RGD
Celera	3	33,916,172 - 33,965,473 (+)	RGD
cM Map	3		ENTREZGENE

Sequence:

show sequence

AGAATCTCTTCCCAGCAGCCTTTGCGGTTCCAACATGGCGGAGCTGACGGTGGAGGTTCGCGGC
TCCAACGGGGCTTTCTACAAGGGATTTATCAAAGATGTCCACGAAGACTCCCTCACAGTTGTTT
TTGAAAATAATTGGCAACCAGAACGCCAGGTTCCGTTTAATGAAGTGCGATTACCACCACCACC
TGATATAAAAAAAGAAATTAGTGAAGGAGATGAAGTAGAGGTATATTCAAGAGCAAATGACCAA
GAGCCATGTGGATGGTGGCTGGCTAAAGTTCGGATGATGAAAGGCGAGTTTTATGTCATTGAAT
ATGCTGCTTGTGATGCCACTTACAATGAAATAGTCACATTTGAACGACTTCGGCCTGTCAATCA
AAATAAAACTGTCAAAAAAAATACCTTCTTTAAGTGCACAGTGGATGTTCCTGAGGACCTGAGA
GAAGCGTGTGCTAATGAAAATGCCCATAAAGATTTTAAGAAAGCAGTAGGAGCATGCAGAATCT
TTTATCATCCTGAAACTACCCAGCTAATGATACTGTCGGCCAGTGAAGCAACTGTGAAGAGAGT
AAATATCTTAAGTGATATGCATTTGAGAAGTATTCGGACGAAGTTGATGCTTATGTCCAGAAAT
GAAGAGGCCACTAAGCATTTAGAATGCACAAAACAACTTGCAGCAGCTTTTCATGAAGAATTTG
TTGTGAGAGAAGATTTAATGGGCCTGGCGATAGGAACGCATGGCAGTAACATACAGCAAGCTAG
GAAGGTTCCTGGAGTTACTGCCATTGAGTTAGATGAAGACACCGGAACGTTTAGAATCTATGGA
GAGAGTGCTGAGGCTGTAAAAAAAGCTAGAGGTTTCTTGGAATTTGTGGAAGATTTTATTCAAG
TTCCCAGGAATCTTGTTGGAAAAGTAATTGGAAAAAATGGCAAAGTTATTCAAGAAATAGTGGA
TAAATCTGGTGTGGTTCGAGTAAGAATTGAAGGAGACAATGAAAATAAACTACCTAGAGAAGAC
GGAATGGTTCCATTTGTATTTGTTGGCACTAAAGAAAGCATTGGGAATGTGCAAGTTCTTCTAG
AGTATCACATCGCTTACTTAAAGGAAGTGGAACAACTAAGAATGGAACGTCTGCAGATTGATGA
GCAGCTGCGACAGATTGGTATGGGTTTCAGACCTTCTTCCACCAGAGGGCCTGAAAGAGAGAAA
GGATATGCCACTGATGAAAGTACCGTCTCTTCTGTACAAGGTTCTAGGTCTTATAGTGGAAGAG
GCAGAGGTCGTCGGGGCCCTAATTACACCTCCGGTTATGGTACAAATTCTGAGCTGTCTAACCC
CTCCGAAACAGAATCTGAGCGTAAAGATGAGCTGAGTGATTGGTCATTGGCAGGAGAAGATGAT
CGAGAGACTCGACATCAGCGAGACAGCAGGAGACGCCCAGGAGGAAGAGGCAGAAGTGTTTCTG
GGGGACGAGGTCGTGGTGGACCACGTGGTGGCAAATCCTCCATCAGTTCTGTGCTCAAAGATCC
AGACAGCAATCCATACAGCTTACTTGATAATACAGAATCCGATCAGACTGCAGACACTGACGCC
AGCGAATCTCACCACAGTACTAACCGTCGTAGGCGGTCTCGTAGACGGAGGACTGATGAAGATG
CTGTTCTGATGGATGGACTGACTGAATCTGATACAGCCTCAGTTAATGAGAATGGGCTAGATGA
TAGTGAAAAAAAACCCCAGCGACGCAATCGTAGCCGCAGGCGTCGTTTCAGGGGTCAGGCAGAA
GATAGACAGCCAGTCACAGTTGCAGATTATATTTCTAGAGCTGAGTCTCAGAGCAGACAAAGAA
ACCTCCCAAGGGAAACTTTGGCTAAAAACAAGAAAGAAATGGCAAAAGATGTGATTGAAGAGCA
TGGTCCTTCAGAAAAGGCAATAAATGGTCCAACTAGCGCTTCTGGCGATGAAATTCCTAAGCTA
CCGCGTACTCTGGGAGAAGAAAAGACTAAGACCTTAAAAGAAGACAGCACTCAAGAAGCAGCAG
TCCTGAATGGTGTTTCATAACTGAAGGAAGTTCCTAGTTTACAGTTCTTTTACATTACAGTTAC
AATAGTGCTTGTACAAGCTTGCCAAAGATAGAATACGGATCGCCAGTCTTACATCGCACTTTCA
GTTCCTCCATTTGGAATTCAGAAAGGGGAGGGATCCTGAAGAAATCATATGTTAAACATACTTT
GACACCTACTGTGTTAAAAATATATCATCAGATGTGCCTTGAGAATAGTATATGTAACATTAAA
AAAAGTTGCTGGCTATAGGAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

NM_001113189 ⟹ NP_001106660

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	3	34,074,247 - 34,123,489 (+)	NCBI
GRCm38	3	34,020,079 - 34,069,345 (+)	NCBI
MGSCv37	3	33,919,001 - 33,968,267 (+)	RGD
Celera	3	33,916,172 - 33,965,473 (+)	RGD
cM Map	3		ENTREZGENE

Sequence:

show sequence

AGAATCTCTTCCCAGCAGCCTTTGCGGTTCCAACATGGCGGAGCTGACGGTGGAGGTTCGCGGC
TCCAACGGGGCTTTCTACAAGGGATTTATCAAAGATGTCCACGAAGACTCCCTCACAGTTGTTT
TTGAAAATAATTGGCAACCAGAACGCCAGGTTCCGTTTAATGAAGTGCGATTACCACCACCACC
TGATATAAAAAAAGAAATTAGTGAAGGAGATGAAGTAGAGGTATATTCAAGAGCAAATGACCAA
GAGCCATGTGGATGGTGGCTGGCTAAAGTTCGGATGATGAAAGGCGAGTTTTATGTCATTGAAT
ATGCTGCTTGTGATGCCACTTACAATGAAATAGTCACATTTGAACGACTTCGGCCTGTCAATCA
AAATAAAACTGTCAAAAAAAATACCTTCTTTAAGTGCACAGTGGATGTTCCTGAGGACCTGAGA
GAAGCGTGTGCTAATGAAAATGCCCATAAAGATTTTAAGAAAGCAGTAGGAGCATGCAGAATCT
TTTATCATCCTGAAACTACCCAGCTAATGATACTGTCGGCCAGTGAAGCAACTGTGAAGAGAGT
AAATATCTTAAGTGATATGCATTTGAGAAGTATTCGGACGAAGTTGATGCTTATGTCCAGAAAT
GAAGAGGCCACTAAGCATTTAGAATGCACAAAACAACTTGCAGCAGCTTTTCATGAAGAATTTG
TTGTGAGAGAAGATTTAATGGGCCTGGCGATAGGAACGCATGGCAGTAACATACAGCAAGCTAG
GAAGGTTCCTGGAGTTACTGCCATTGAGTTAGATGAAGACACCGGAACGTTTAGAATCTATGGA
GAGAGTGCTGAGGCTGTAAAAAAAGCTAGAGGTTTCTTGGAATTTGTGGAAGATTTTATTCAAG
TTCCCAGGAATCTTGTTGGAAAAGTAATTGGAAAAAATGGCAAAGTTATTCAAGAAATAGTGGA
TAAATCTGGTGTGGTTCGAGTAAGAATTGAAGGAGACAATGAAAATAAACTACCTAGAGAAGAC
GGAATGGTTCCATTTGTATTTGTTGGCACTAAAGAAAGCATTGGGAATGTGCAAGTTCTTCTAG
AGTATCACATCGCTTACTTAAAGGAAGTGGAACAACTAAGAATGGAACGTCTGCAGATTGATGA
GCAGCTGCGACAGATTGGTTCTAGGTCTTATAGTGGAAGAGGCAGAGGTCGTCGGGGCCCTAAT
TACACCTCCGGTTATGGTACAAATTCTGAGCTGTCTAACCCCTCCGAAACAGAATCTGAGCGTA
AAGATGAGCTGAGTGATTGGTCATTGGCAGGAGAAGATGATCGAGAGACTCGACATCAGCGAGA
CAGCAGGAGACGCCCAGGAGGAAGAGGCAGAAGTGTTTCTGGGGGACGAGGTCGTGGTGGACCA
CGTGGTGGCAAATCCTCCATCAGTTCTGTGCTCAAAGATCCAGACAGCAATCCATACAGCTTAC
TTGATAATACAGAATCCGATCAGACTGCAGACACTGACGCCAGCGAATCTCACCACAGTACTAA
CCGTCGTAGGCGGTCTCGTAGACGGAGGACTGATGAAGATGCTGTTCTGATGGATGGACTGACT
GAATCTGATACAGCCTCAGTTAATGAGAATGGGCTAGTCACAGTTGCAGATTATATTTCTAGAG
CTGAGTCTCAGAGCAGACAAAGAAACCTCCCAAGGGAAACTTTGGCTAAAAACAAGAAAGAAAT
GGCAAAAGATGTGATTGAAGAGCATGGTCCTTCAGAAAAGGCAATAAATGGTCCAACTAGCGCT
TCTGGCGATGAAATTCCTAAGCTACCGCGTACTCTGGGAGAAGAAAAGACTAAGACCTTAAAAG
AAGACAGCACTCAAGAAGCAGCAGTCCTGAATGGTGTTTCATAACTGAAGGAAGTTCCTAGTTT
ACAGTTCTTTTACATTACAGTTACAATAGTGCTTGTACAAGCTTGCCAAAGATAGAATACGGAT
CGCCAGTCTTACATCGCACTTTCAGTTCCTCCATTTGGAATTCAGAAAGGGGAGGGATCCTGAA
GAAATCATATGTTAAACATACTTTGACACCTACTGTGTTAAAAATATATCATCAGATGTGCCTT
GAGAATAGTATATGTAACATTAAAAAAAGTTGCTGGCTATAGGAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

NM_008053 ⟹ NP_032079

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	3	34,074,247 - 34,123,489 (+)	NCBI
GRCm38	3	34,020,079 - 34,069,345 (+)	NCBI
MGSCv37	3	33,919,001 - 33,968,267 (+)	RGD
Celera	3	33,916,172 - 33,965,473 (+)	RGD
cM Map	3		ENTREZGENE

Sequence:

show sequence

AGAATCTCTTCCCAGCAGCCTTTGCGGTTCCAACATGGCGGAGCTGACGGTGGAGGTTCGCGGC
TCCAACGGGGCTTTCTACAAGGGATTTATCAAAGATGTCCACGAAGACTCCCTCACAGTTGTTT
TTGAAAATAATTGGCAACCAGAACGCCAGGTTCCGTTTAATGAAGTGCGATTACCACCACCACC
TGATATAAAAAAAGAAATTAGTGAAGGAGATGAAGTAGAGGTATATTCAAGAGCAAATGACCAA
GAGCCATGTGGATGGTGGCTGGCTAAAGTTCGGATGATGAAAGGCGAGTTTTATGTCATTGAAT
ATGCTGCTTGTGATGCCACTTACAATGAAATAGTCACATTTGAACGACTTCGGCCTGTCAATCA
AAATAAAACTGTCAAAAAAAATACCTTCTTTAAGTGCACAGTGGATGTTCCTGAGGACCTGAGA
GAAGCGTGTGCTAATGAAAATGCCCATAAAGATTTTAAGAAAGCAGTAGGAGCATGCAGAATCT
TTTATCATCCTGAAACTACCCAGCTAATGATACTGTCGGCCAGTGAAGCAACTGTGAAGAGAGT
AAATATCTTAAGTGATATGCATTTGAGAAGTATTCGGACGAAGTTGATGCTTATGTCCAGAAAT
GAAGAGGCCACTAAGCATTTAGAATGCACAAAACAACTTGCAGCAGCTTTTCATGAAGAATTTG
TTGTGAGAGAAGATTTAATGGGCCTGGCGATAGGAACGCATGGCAGTAACATACAGCAAGCTAG
GAAGGTTCCTGGAGTTACTGCCATTGAGTTAGATGAAGACACCGGAACGTTTAGAATCTATGGA
GAGAGTGCTGAGGCTGTAAAAAAAGCTAGAGGTTTCTTGGAATTTGTGGAAGATTTTATTCAAG
TTCCCAGGAATCTTGTTGGAAAAGTAATTGGAAAAAATGGCAAAGTTATTCAAGAAATAGTGGA
TAAATCTGGTGTGGTTCGAGTAAGAATTGAAGGAGACAATGAAAATAAACTACCTAGAGAAGAC
GGAATGGTTCCATTTGTATTTGTTGGCACTAAAGAAAGCATTGGGAATGTGCAAGTTCTTCTAG
AGTATCACATCGCTTACTTAAAGGAAGTGGAACAACTAAGAATGGAACGTCTGCAGATTGATGA
GCAGCTGCGACAGATTGGTTCTAGGTCTTATAGTGGAAGAGGCAGAGGTCGTCGGGGCCCTAAT
TACACCTCCGGTTATGGTACAAATTCTGAGCTGTCTAACCCCTCCGAAACAGAATCTGAGCGTA
AAGATGAGCTGAGTGATTGGTCATTGGCAGGAGAAGATGATCGAGAGACTCGACATCAGCGAGA
CAGCAGGAGACGCCCAGGAGGAAGAGGCAGAAGTGTTTCTGGGGGACGAGGTCGTGGTGGACCA
CGTGGTGGCAAATCCTCCATCAGTTCTGTGCTCAAAGATCCAGACAGCAATCCATACAGCTTAC
TTGATAATACAGAATCCGATCAGACTGCAGACACTGACGCCAGCGAATCTCACCACAGTACTAA
CCGTCGTAGGCGGTCTCGTAGACGGAGGACTGATGAAGATGCTGTTCTGATGGATGGACTGACT
GAATCTGATACAGCCTCAGTTAATGAGAATGGGCTAGGCAAAAGATGTGATTGAAGAGCATGGT
CCTTCAGAAAAGGCAATAAATGGTCCAACTAGCGCTTCTGGCGATGAAATTCCTAAGCTACCGC
GTACTCTGGGAGAAGAAAAGACTAAGACCTTAAAAGAAGACAGCACTCAAGAAGCAGCAGTCCT
GAATGGTGTTTCATAACTGAAGGAAGTTCCTAGTTTACAGTTCTTTTACATTACAGTTACAATA
GTGCTTGTACAAGCTTGCCAAAGATAGAATACGGATCGCCAGTCTTACATCGCACTTTCAGTTC
CTCCATTTGGAATTCAGAAAGGGGAGGGATCCTGAAGAAATCATATGTTAAACATACTTTGACA
CCTACTGTGTTAAAAATATATCATCAGATGTGCCTTGAGAATAGTATATGTAACATTAAAAAAA
GTTGCTGGCTATAGGAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006535400 ⟹ XP_006535463

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	3	34,074,133 - 34,124,121 (+)	NCBI
GRCm38	3	34,020,058 - 34,069,980 (+)	NCBI

Sequence:

show sequence

GGAGCGGGCCGGGAGCGTCCCGCCCTCCCGCCCGCCCGCCCCTCCCCCGCGACGCTCGCCCCTC
CCCCCTCCTCCCCTCGCGTTGGAAAGTTTCTAGAATCTCTTCCCAGCAGCCTTTGCGGTTCCAA
CATGGCGGAGCTGACGGTGGAGGTTCGCGGCTCCAACGGGGCTTTCTACAAGGGATTTATCAAA
GATGTCCACGAAGACTCCCTCACAGTTGTTTTTGAAAATAATTGGCAACCAGAACGCCAGGTTC
CGTTTAATGAAGTGCGATTACCACCACCACCTGATATAAAAAAAGAAATTAGTGAAGGAGATGA
AGTAGAGGTATATTCAAGAGCAAATGACCAAGAGCCATGTGGATGGTGGCTGGCTAAAGTTCGG
ATGATGAAAGGCGAGTTTTATGTCATTGAATATGCTGCTTGTGATGCCACTTACAATGAAATAG
TCACATTTGAACGACTTCGGCCTGTCAATCAAAATAAAACTGTCAAAAAAAATACCTTCTTTAA
GTGCACAGTGGATGTTCCTGAGGACCTGAGAGAAGCGTGTGCTAATGAAAATGCCCATAAAGAT
TTTAAGAAAGCAGTAGGAGCATGCAGAATCTTTTATCATCCTGAAACTACCCAGCTAATGATAC
TGTCGGCCAGTGAAGCAACTGTGAAGAGAGTAAATATCTTAAGTGATATGCATTTGAGAAGTAT
TCGGACGAAGTTGATGCTTATGTCCAGAAATGAAGAGGCCACTAAGCATTTAGAATGCACAAAA
CAACTTGCAGCAGCTTTTCATGAAGAATTTGTTGTGAGAGAAGATTTAATGGGCCTGGCGATAG
GAACGCATGGCAGTAACATACAGCAAGCTAGGAAGGTTCCTGGAGTTACTGCCATTGAGTTAGA
TGAAGACACCGGAACGTTTAGAATCTATGGAGAGAGTGCTGAGGCTGTAAAAAAAGCTAGAGGT
TTCTTGGAATTTGTGGAAGATTTTATTCAAGTTCCCAGGAATCTTGTTGGAAAAGTAATTGGAA
AAAATGGCAAAGTTATTCAAGAAATAGTGGATAAATCTGGTGTGGTTCGAGTAAGAATTGAAGG
AGACAATGAAAATAAACTACCTAGAGAAGACGGAATGGTTCCATTTGTATTTGTTGGCACTAAA
GAAAGCATTGGGAATGTGCAAGTTCTTCTAGAGTATCACATCGCTTACTTAAAGGAAGTGGAAC
AACTAAGAATGGAACGTCTGCAGATTGATGAGCAGCTGCGACAGATTGGTATGGGTTTCAGACC
TTCTTCCACCAGAGGGCCTGAAAGAGAGAAAGGATATGCCACTGATGAAAGTACCGTCTCTTCT
GTACAAGGTTCTAGGTCTTATAGTGGAAGAGGCAGAGGTCGTCGGGGCCCTAATTACACCTCCG
GTTATGGTACAAATTCTGAGCTGTCTAACCCCTCCGAAACAGAATCTGAGCGTAAAGATGAGCT
GAGTGATTGGTCATTGGCAGGAGAAGATGATCGAGAGACTCGACATCAGCGAGACAGCAGGAGA
CGCCCAGGAGGAAGAGGCAGAAGTGTTTCTGGGGGACGAGGTCGTGGTGGACCACGTGGTGGCA
AATCCTCCATCAGTTCTGTGCTCAAAGATCCAGACAGCAATCCATACAGCTTACTTGATAATAC
AGAATCCGATCAGACTGCAGACACTGACGCCAGCGAATCTCACCACAGTACTAACCGTCGTAGG
CGGTCTCGTAGACGGAGGACTGATGAAGATGCTGTTCTGATGGATGGACTGACTGAATCTGATA
CAGCCTCAGTTAATGAGAATGGGCTAGTCACAGTTGCAGATTATATTTCTAGAGCTGAGTCTCA
GAGCAGACAAAGAAACCTCCCAAGGGAAACTTTGGCTAAAAACAAGAAAGAAATGGCAAAAGAT
GTGATTGAAGAGCATGGTCCTTCAGAAAAGGCAATAAATGGTCCAACTAGCGCTTCTGGCGATG
AAATTCCTAAGCTACCGCGTACTCTGGGAGAAGAAAAGACTAAGACCTTAAAAGAAGACAGCAC
TCAAGAAGCAGCAGTCCTGAATGGTGTTTCATAACTGAAGGAAGTTCCTAGTTTACAGTTCTTT
TACATTACAGTTACAATAGTGCTTGTACAAGCTTGCCAAAGATAGAATACGGATCGCCAGTCTT
ACATCGCACTTTCAGTTCCTCCATTTGGAATTCAGAAAGGGGAGGGATCCTGAAGAAATCATAT
GTTAAACATACTTTGACACCTACTGTGTTAAAAATATATCATCAGATGTGCCTTGAGAATAGTA
TATGTAACATTAAAAAAAGTTGCTGGCTATAGGAAATGTTATTTTGTTTTCAAAATATGGCAGA
GATGGGGGGAGGTGGGTGGGGTGGGGTCCCTAACGTAATATTCTTTATGAAAGCATTAGCTGCT
TTTGTTACATTTTTAATAATATGCAACCACTTCTTCACCCGAGGAAAACTAGAATGAAGCAGTC
TAAAATATTTTGCACTGAATTGTAATTTCTTCATTAGTTTAGTCTGGAAACTGGTCTGTTTAAT
GTGTTTTTTAAATGCTGTTTGTAGAGGCAATTCTGCAGACCACTGGAAATACATGTTAACTCAT
CTGCAGGGATACTGGGTGATATTGGCAGTGACTGTTCTACATTGAGGCTTTGTTTGGTTTATTT
ATTAAAGTGTACAGTATTTAAAAATCAAACATAGCTTTAGTTGAAACACTAAGCTGATTAGTCA
TGTCCATTCAGACATAACCTGAACTACTGAAAAGATCAATTTCCAGAAGGTTTATTCTGTATAA
ACTACATGTTTAGTCTTCAGTAGAGTACTTTTCACATTTTCTTTCTACCTTTTTTTTCTTTTTT
TTTTTCTTCCCCCCTTTTTTTGATTTTGGTTGTTTGATGTGCAATATGTTTTTGTATGCAGGTA
GTAAAATAAACTTTGATCTTCCA

hide sequence

RefSeq Acc Id:

XM_006535401 ⟹ XP_006535464

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	3	34,074,133 - 34,124,121 (+)	NCBI
GRCm38	3	34,020,058 - 34,069,980 (+)	NCBI

Sequence:

show sequence

GGAGCGGGCCGGGAGCGTCCCGCCCTCCCGCCCGCCCGCCCCTCCCCCGCGACGCTCGCCCCTC
CCCCCTCCTCCCCTCGCGTTGGAAAGTTTCTAGAATCTCTTCCCAGCAGCCTTTGCGGTTCCAA
CATGGCGGAGCTGACGGTGGAGGTTCGCGGCTCCAACGGGGCTTTCTACAAGGGATTTATCAAA
GATGTCCACGAAGACTCCCTCACAGTTGTTTTTGAAAATAATTGGCAACCAGAACGCCAGGTTC
CGTTTAATGAAGTGCGATTACCACCACCACCTGATATAAAAAAAGAAATTAGTGAAGGAGATGA
AGTAGAGGTATATTCAAGAGCAAATGACCAAGAGCCATGTGGATGGTGGCTGGCTAAAGTTCGG
ATGATGAAAGGCGAGTTTTATGTCATTGAATATGCTGCTTGTGATGCCACTTACAATGAAATAG
TCACATTTGAACGACTTCGGCCTGTCAATCAAAATAAAACTGTCAAAAAAAATACCTTCTTTAA
GTGCACAGTGGATGTTCCTGAGGACCTGAGAGAAGCGTGTGCTAATGAAAATGCCCATAAAGAT
TTTAAGAAAGCAGTAGGAGCATGCAGAATCTTTTATCATCCTGAAACTACCCAGCTAATGATAC
TGTCGGCCAGTGAAGCAACTGTGAAGAGAGTAAATATCTTAAGTGATATGCATTTGAGAAGTAT
TCGGACGAAGTTGATGCTTATGTCCAGAAATGAAGAGGCCACTAAGCATTTAGAATGCACAAAA
CAACTTGCAGCAGCTTTTCATGAAGAATTTGTTGTGAGAGAAGATTTAATGGGCCTGGCGATAG
GAACGCATGGCAGTAACATACAGCAAGCTAGGAAGGTTCCTGGAGTTACTGCCATTGAGTTAGA
TGAAGACACCGGAACGTTTAGAATCTATGGAGAGAGTGCTGAGGCTGTAAAAAAAGCTAGAGGT
TTCTTGGAATTTGTGGAAGATTTTATTCAAGTTCCCAGGAATCTTGTTGGAAAAGTAATTGGAA
AAAATGGCAAAGTTATTCAAGAAATAGTGGATAAATCTGGTGTGGTTCGAGTAAGAATTGAAGG
AGACAATGAAAATAAACTACCTAGAGAAGACGGAATGGTTCCATTTGTATTTGTTGGCACTAAA
GAAAGCATTGGGAATGTGCAAGTTCTTCTAGAGTATCACATCGCTTACTTAAAGGAAGTGGAAC
AACTAAGAATGGAACGTCTGCAGATTGATGAGCAGCTGCGACAGATTGGTTCTAGGTCTTATAG
TGGAAGAGGCAGAGGTCGTCGGGGCCCTAATTACACCTCCGGTTATGGTACAAATTCTGAGCTG
TCTAACCCCTCCGAAACAGAATCTGAGCGTAAAGATGAGCTGAGTGATTGGTCATTGGCAGGAG
AAGATGATCGAGAGACTCGACATCAGCGAGACAGCAGGAGACGCCCAGGAGGAAGAGGCAGAAG
TGTTTCTGGGGGACGAGGTCGTGGTGGACCACGTGGTGGCAAATCCTCCATCAGTTCTGTGCTC
AAAGATCCAGACAGCAATCCATACAGCTTACTTGATAATACAGAATCCGATCAGACTGCAGACA
CTGACGCCAGCGAATCTCACCACAGTACTAACCGTCGTAGGCGGTCTCGTAGACGGAGGACTGA
TGAAGATGCTGTTCTGATGGATGGACTGACTGAATCTGATACAGCCTCAGTTAATGAGAATGGG
CTAGATGATAGTGAAAAAAAACCCCAGCGACGCAATCGTAGCCGCAGGCGTCGTTTCAGGGGTC
AGGCAGAAGATAGACAGCCAGTCACAGTTGCAGATTATATTTCTAGAGCTGAGTCTCAGAGCAG
ACAAAGAAACCTCCCAAGGGAAACTTTGGCTAAAAACAAGAAAGAAATGGCAAAAGATGTGATT
GAAGAGCATGGTCCTTCAGAAAAGGCAATAAATGGTCCAACTAGCGCTTCTGGCGATGAAATTC
CTAAGCTACCGCGTACTCTGGGAGAAGAAAAGACTAAGACCTTAAAAGAAGACAGCACTCAAGA
AGCAGCAGTCCTGAATGGTGTTTCATAACTGAAGGAAGTTCCTAGTTTACAGTTCTTTTACATT
ACAGTTACAATAGTGCTTGTACAAGCTTGCCAAAGATAGAATACGGATCGCCAGTCTTACATCG
CACTTTCAGTTCCTCCATTTGGAATTCAGAAAGGGGAGGGATCCTGAAGAAATCATATGTTAAA
CATACTTTGACACCTACTGTGTTAAAAATATATCATCAGATGTGCCTTGAGAATAGTATATGTA
ACATTAAAAAAAGTTGCTGGCTATAGGAAATGTTATTTTGTTTTCAAAATATGGCAGAGATGGG
GGGAGGTGGGTGGGGTGGGGTCCCTAACGTAATATTCTTTATGAAAGCATTAGCTGCTTTTGTT
ACATTTTTAATAATATGCAACCACTTCTTCACCCGAGGAAAACTAGAATGAAGCAGTCTAAAAT
ATTTTGCACTGAATTGTAATTTCTTCATTAGTTTAGTCTGGAAACTGGTCTGTTTAATGTGTTT
TTTAAATGCTGTTTGTAGAGGCAATTCTGCAGACCACTGGAAATACATGTTAACTCATCTGCAG
GGATACTGGGTGATATTGGCAGTGACTGTTCTACATTGAGGCTTTGTTTGGTTTATTTATTAAA
GTGTACAGTATTTAAAAATCAAACATAGCTTTAGTTGAAACACTAAGCTGATTAGTCATGTCCA
TTCAGACATAACCTGAACTACTGAAAAGATCAATTTCCAGAAGGTTTATTCTGTATAAACTACA
TGTTTAGTCTTCAGTAGAGTACTTTTCACATTTTCTTTCTACCTTTTTTTTCTTTTTTTTTTTC
TTCCCCCCTTTTTTTGATTTTGGTTGTTTGATGTGCAATATGTTTTTGTATGCAGGTAGTAAAA
TAAACTTTGATCTTCCA

hide sequence

RefSeq Acc Id:

XM_006535402 ⟹ XP_006535465

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	3	34,074,133 - 34,124,121 (+)	NCBI
GRCm38	3	34,020,058 - 34,069,980 (+)	NCBI

Sequence:

show sequence

GGAGCGGGCCGGGAGCGTCCCGCCCTCCCGCCCGCCCGCCCCTCCCCCGCGACGCTCGCCCCTC
CCCCCTCCTCCCCTCGCGTTGGAAAGTTTCTAGAATCTCTTCCCAGCAGCCTTTGCGGTTCCAA
CATGGCGGAGCTGACGGTGGAGGTTCGCGGCTCCAACGGGGCTTTCTACAAGGGATTTATCAAA
GATGTCCACGAAGACTCCCTCACAGTTGTTTTTGAAAATAATTGGCAACCAGAACGCCAGGTTC
CGTTTAATGAAGTGCGATTACCACCACCACCTGATATAAAAAAAGAAATTAGTGAAGGAGATGA
AGTAGAGGTATATTCAAGAGCAAATGACCAAGAGCCATGTGGATGGTGGCTGGCTAAAGTTCGG
ATGATGAAAGGCGAGTTTTATGTCATTGAATATGCTGCTTGTGATGCCACTTACAATGAAATAG
TCACATTTGAACGACTTCGGCCTGTCAATCAAAATAAAACTGTCAAAAAAAATACCTTCTTTAA
GTGCACAGTGGATGTTCCTGAGGACCTGAGAGAAGCGTGTGCTAATGAAAATGCCCATAAAGAT
TTTAAGAAAGCAGTAGGAGCATGCAGAATCTTTTATCATCCTGAAACTACCCAGCTAATGATAC
TGTCGGCCAGTGAAGCAACTGTGAAGAGAGTAAATATCTTAAGTGATATGCATTTGAGAAGTAT
TCGGACGAAGTTGATGCTTATGTCCAGAAATGAAGAGGCCACTAAGCATTTAGAATGCACAAAA
CAACTTGCAGCAGCTTTTCATGAAGAATTTGTTGTGAGAGAAGATTTAATGGGCCTGGCGATAG
GAACGCATGGCAGTAACATACAGCAAGCTAGGAAGGTTCCTGGAGTTACTGCCATTGAGTTAGA
TGAAGACACCGGAACGTTTAGAATCTATGGAGAGAGTGCTGAGGCTGTAAAAAAAGCTAGAGGT
TTCTTGGAATTTGTGGAAGATTTTATTCAAGTTCCCAGGAATCTTGTTGGAAAAGTAATTGGAA
AAAATGGCAAAGTTATTCAAGAAATAGTGGATAAATCTGGTGTGGTTCGAGTAAGAATTGAAGG
AGACAATGAAAATAAACTACCTAGAGAAGACGGAATGGTTCCATTTGTATTTGTTGGCACTAAA
GAAAGCATTGGGAATGTGCAAGTTCTTCTAGAGTATCACATCGCTTACTTAAAGGAAGTGGAAC
AACTAAGAATGGAACGTCTGCAGATTGATGAGCAGCTGCGACAGATTGGTATGGGTTTCAGACC
TTCTTCCACCAGAGGGCCTGAAAGAGAGAAAGGATATGCCACTGATGAAAGTACCGTCTCTTCT
GTACAAGGTTCTAGGTCTTATAGTGGAAGAGGCAGAGGTCGTCGGGGCCCTAATTACACCTCCG
GTTATGGTACAAATTCTGAGCTGTCTAACCCCTCCGAAACAGAATCTGAGCGTAAAGATGAGCT
GAGTGATTGGTCATTGGCAGGAGAAGATGATCGAGAGACTCGACATCAGCGAGACAGCAGGAGA
CGCCCAGGAGGAAGAGGCAGAAGTGTTTCTGGGGGACGAGGTCGTGGTGGACCACGTGGTGGCA
AATCCTCCATCAGTTCTGTGCTCAAAGATCCAGACAGCAATCCATACAGCTTACTTGATAATAC
AGAATCCGATCAGACTGCAGACACTGACGCCAGCGAATCTCACCACAGTACTAACCGTCGTAGG
CGGTCTCGTAGACGGAGGACTGATGAAGATGCTGTTCTGATGGATGGACTGACTGAATCTGATA
CAGCCTCAGTTAATGAGAATGGGCTAGGCAAAAGATGTGATTGAAGAGCATGGTCCTTCAGAAA
AGGCAATAAATGGTCCAACTAGCGCTTCTGGCGATGAAATTCCTAAGCTACCGCGTACTCTGGG
AGAAGAAAAGACTAAGACCTTAAAAGAAGACAGCACTCAAGAAGCAGCAGTCCTGAATGGTGTT
TCATAACTGAAGGAAGTTCCTAGTTTACAGTTCTTTTACATTACAGTTACAATAGTGCTTGTAC
AAGCTTGCCAAAGATAGAATACGGATCGCCAGTCTTACATCGCACTTTCAGTTCCTCCATTTGG
AATTCAGAAAGGGGAGGGATCCTGAAGAAATCATATGTTAAACATACTTTGACACCTACTGTGT
TAAAAATATATCATCAGATGTGCCTTGAGAATAGTATATGTAACATTAAAAAAAGTTGCTGGCT
ATAGGAAATGTTATTTTGTTTTCAAAATATGGCAGAGATGGGGGGAGGTGGGTGGGGTGGGGTC
CCTAACGTAATATTCTTTATGAAAGCATTAGCTGCTTTTGTTACATTTTTAATAATATGCAACC
ACTTCTTCACCCGAGGAAAACTAGAATGAAGCAGTCTAAAATATTTTGCACTGAATTGTAATTT
CTTCATTAGTTTAGTCTGGAAACTGGTCTGTTTAATGTGTTTTTTAAATGCTGTTTGTAGAGGC
AATTCTGCAGACCACTGGAAATACATGTTAACTCATCTGCAGGGATACTGGGTGATATTGGCAG
TGACTGTTCTACATTGAGGCTTTGTTTGGTTTATTTATTAAAGTGTACAGTATTTAAAAATCAA
ACATAGCTTTAGTTGAAACACTAAGCTGATTAGTCATGTCCATTCAGACATAACCTGAACTACT
GAAAAGATCAATTTCCAGAAGGTTTATTCTGTATAAACTACATGTTTAGTCTTCAGTAGAGTAC
TTTTCACATTTTCTTTCTACCTTTTTTTTCTTTTTTTTTTTCTTCCCCCCTTTTTTTGATTTTG
GTTGTTTGATGTGCAATATGTTTTTGTATGCAGGTAGTAAAATAAACTTTGATCTTCCA

hide sequence

RefSeq Acc Id:

XM_036162895 ⟹ XP_036018788

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	3	34,074,265 - 34,124,129 (+)	NCBI

Sequence:

show sequence

GCGGAGCTGACGGTGGAGGTTCGCGGCTCCAACGGGGCTTTCTACAAGTCTCTCCCACACCCTA
GGCTGGCTTTCAGCTTGTAGCCAAGATGACCTTGAGTTTGTGATCCTCCTGGAGTTGTCCTACT
ATTTTATAGTGTGCTGTGGATGGAGTGTTTGAAAATGGGAGGGATTTATCAAAGATGTCCACGA
AGACTCCCTCACAGTTGTTTTTGAAAATAATTGGCAACCAGAACGCCAGGTTCCGTTTAATGAA
GTGCGATTACCACCACCACCTGATATAAAAAAAGAAATTAGTGAAGGAGATGAAGTAGAGGTAT
ATTCAAGAGCAAATGACCAAGAGCCATGTGGATGGTGGCTGGCTAAAGTTCGGATGATGAAAGG
CGAGTTTTATGTCATTGAATATGCTGCTTGTGATGCCACTTACAATGAAATAGTCACATTTGAA
CGACTTCGGCCTGTCAATCAAAATAAAACTGTCAAAAAAAATACCTTCTTTAAGTGCACAGTGG
ATGTTCCTGAGGACCTGAGAGAAGCGTGTGCTAATGAAAATGCCCATAAAGATTTTAAGAAAGC
AGTAGGAGCATGCAGAATCTTTTATCATCCTGAAACTACCCAGCTAATGATACTGTCGGCCAGT
GAAGCAACTGTGAAGAGAGTAAATATCTTAAGTGATATGCATTTGAGAAGTATTCGGACGAAGT
TGATGCTTATGTCCAGAAATGAAGAGGCCACTAAGCATTTAGAATGCACAAAACAACTTGCAGC
AGCTTTTCATGAAGAATTTGTTGTGAGAGAAGATTTAATGGGCCTGGCGATAGGAACGCATGGC
AGTAACATACAGCAAGCTAGGAAGGTTCCTGGAGTTACTGCCATTGAGTTAGATGAAGACACCG
GAACGTTTAGAATCTATGGAGAGAGTGCTGAGGCTGTAAAAAAAGCTAGAGGTTTCTTGGAATT
TGTGGAAGATTTTATTCAAGTTCCCAGGAATCTTGTTGGAAAAGTAATTGGAAAAAATGGCAAA
GTTATTCAAGAAATAGTGGATAAATCTGGTGTGGTTCGAGTAAGAATTGAAGGAGACAATGAAA
ATAAACTACCTAGAGAAGACGGAATGGTTCCATTTGTATTTGTTGGCACTAAAGAAAGCATTGG
GAATGTGCAAGTTCTTCTAGAGTATCACATCGCTTACTTAAAGGAAGTGGAACAACTAAGAATG
GAACGTCTGCAGATTGATGAGCAGCTGCGACAGATTGGTATGGGTTTCAGACCTTCTTCCACCA
GAGGGCCTGAAAGAGAGAAAGGATATGCCACTGATGAAAGTACCGTCTCTTCTGTACAAGGTTC
TAGGTCTTATAGTGGAAGAGGCAGAGGTCGTCGGGGCCCTAATTACACCTCCGGTTATGGTACA
AATTCTGAGCTGTCTAACCCCTCCGAAACAGAATCTGAGCGTAAAGATGAGCTGAGTGATTGGT
CATTGGCAGGAGAAGATGATCGAGAGACTCGACATCAGCGAGACAGCAGGAGACGCCCAGGAGG
AAGAGGCAGAAGTGTTTCTGGGGGACGAGGTCGTGGTGGACCACGTGGTGGCAAATCCTCCATC
AGTTCTGTGCTCAAAGATCCAGACAGCAATCCATACAGCTTACTTGATAATACAGAATCCGATC
AGACTGCAGACACTGACGCCAGCGAATCTCACCACAGTACTAACCGTCGTAGGCGGTCTCGTAG
ACGGAGGACTGATGAAGATGCTGTTCTGATGGATGGACTGACTGAATCTGATACAGCCTCAGTT
AATGAGAATGGGCTAGATGATAGTGAAAAAAAACCCCAGCGACGCAATCGTAGCCGCAGGCGTC
GTTTCAGGGGTCAGGCAGAAGATAGACAGCCAGTCACAGTTGCAGATTATATTTCTAGAGCTGA
GTCTCAGAGCAGACAAAGAAACCTCCCAAGGGAAACTTTGGCTAAAAACAAGAAAGAAATGGCA
AAAGATGTGATTGAAGAGCATGGTCCTTCAGAAAAGGCAATAAATGGTCCAACTAGCGCTTCTG
GCGATGAAATTCCTAAGCTACCGCGTACTCTGGGAGAAGAAAAGACTAAGACCTTAAAAGAAGA
CAGCACTCAAGAAGCAGCAGTCCTGAATGGTGTTTCATAACTGAAGGAAGTTCCTAGTTTACAG
TTCTTTTACATTACAGTTACAATAGTGCTTGTACAAGCTTGCCAAAGATAGAATACGGATCGCC
AGTCTTACATCGCACTTTCAGTTCCTCCATTTGGAATTCAGAAAGGGGAGGGATCCTGAAGAAA
TCATATGTTAAACATACTTTGACACCTACTGTGTTAAAAATATATCATCAGATGTGCCTTGAGA
ATAGTATATGTAACATTAAAAAAAGTTGCTGGCTATAGGAAATGTTATTTTGTTTTCAAAATAT
GGCAGAGATGGGGGGAGGTGGGTGGGGTGGGGTCCCTAACGTAATATTCTTTATGAAAGCATTA
GCTGCTTTTGTTACATTTTTAATAATATGCAACCACTTCTTCACCCGAGGAAAACTAGAATGAA
GCAGTCTAAAATATTTTGCACTGAATTGTAATTTCTTCATTAGTTTAGTCTGGAAACTGGTCTG
TTTAATGTGTTTTTTAAATGCTGTTTGTAGAGGCAATTCTGCAGACCACTGGAAATACATGTTA
ACTCATCTGCAGGGATACTGGGTGATATTGGCAGTGACTGTTCTACATTGAGGCTTTGTTTGGT
TTATTTATTAAAGTGTACAGTATTTAAAAATCAAACATAGCTTTAGTTGAAACACTAAGCTGAT
TAGTCATGTCCATTCAGACATAACCTGAACTACTGAAAAGATCAATTTCCAGAAGGTTTATTCT
GTATAAACTACATGTTTAGTCTTCAGTAGAGTACTTTTCACATTTTCTTTCTACCTTTTTTTTC
TTTTTTTTTTTCTTCCCCCCTTTTTTTGATTTTGGTTGTTTGATGTGCAATATGTTTTTGTATG
CAGGTAGTAAAATAAACTTTGATCTTCCATTTGCTGA

hide sequence

RefSeq Acc Id:

XM_036162896 ⟹ XP_036018789

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	3	34,074,266 - 34,124,129 (+)	NCBI

Sequence:

show sequence

CGGAGCTGACGGTGGAGGTTCGCGGCTCCAACGGGGCTTTCTACAAGTCTCTCCCACACCCTAG
GCTGGCTTTCAGCTTGTAGCCAAGATGACCTTGAGTTTGTGATCCTCCTGGAGTTGTCCTACTA
TTTTATAGTGTGCTGTGGATGGAGTGTTTGAAAATGGGAGGGATTTATCAAAGATGTCCACGAA
GACTCCCTCACAGTTGTTTTTGAAAATAATTGGCAACCAGAACGCCAGGTTCCGTTTAATGAAG
TGCGATTACCACCACCACCTGATATAAAAAAAGAAATTAGTGAAGGAGATGAAGTAGAGGTATA
TTCAAGAGCAAATGACCAAGAGCCATGTGGATGGTGGCTGGCTAAAGTTCGGATGATGAAAGGC
GAGTTTTATGTCATTGAATATGCTGCTTGTGATGCCACTTACAATGAAATAGTCACATTTGAAC
GACTTCGGCCTGTCAATCAAAATAAAACTGTCAAAAAAAATACCTTCTTTAAGTGCACAGTGGA
TGTTCCTGAGGACCTGAGAGAAGCGTGTGCTAATGAAAATGCCCATAAAGATTTTAAGAAAGCA
GTAGGAGCATGCAGAATCTTTTATCATCCTGAAACTACCCAGCTAATGATACTGTCGGCCAGTG
AAGCAACTGTGAAGAGAGTAAATATCTTAAGTGATATGCATTTGAGAAGTATTCGGACGAAGTT
GATGCTTATGTCCAGAAATGAAGAGGCCACTAAGCATTTAGAATGCACAAAACAACTTGCAGCA
GCTTTTCATGAAGAATTTGTTGTGAGAGAAGATTTAATGGGCCTGGCGATAGGAACGCATGGCA
GTAACATACAGCAAGCTAGGAAGGTTCCTGGAGTTACTGCCATTGAGTTAGATGAAGACACCGG
AACGTTTAGAATCTATGGAGAGAGTGCTGAGGCTGTAAAAAAAGCTAGAGGTTTCTTGGAATTT
GTGGAAGATTTTATTCAAGTTCCCAGGAATCTTGTTGGAAAAGTAATTGGAAAAAATGGCAAAG
TTATTCAAGAAATAGTGGATAAATCTGGTGTGGTTCGAGTAAGAATTGAAGGAGACAATGAAAA
TAAACTACCTAGAGAAGACGGAATGGTTCCATTTGTATTTGTTGGCACTAAAGAAAGCATTGGG
AATGTGCAAGTTCTTCTAGAGTATCACATCGCTTACTTAAAGGAAGTGGAACAACTAAGAATGG
AACGTCTGCAGATTGATGAGCAGCTGCGACAGATTGGTATGGGTTTCAGACCTTCTTCCACCAG
AGGGCCTGAAAGAGAGAAAGGATATGCCACTGATGAAAGTACCGTCTCTTCTGTACAAGGTTCT
AGGTCTTATAGTGGAAGAGGCAGAGGTCGTCGGGGCCCTAATTACACCTCCGGTTATGGTACAA
ATTCTGAGCTGTCTAACCCCTCCGAAACAGAATCTGAGCGTAAAGATGAGCTGAGTGATTGGTC
ATTGGCAGGAGAAGATGATCGAGAGACTCGACATCAGCGAGACAGCAGGAGACGCCCAGGAGGA
AGAGGCAGAAGTGTTTCTGGGGGACGAGGTCGTGGTGGACCACGTGGTGGCAAATCCTCCATCA
GTTCTGTGCTCAAAGATCCAGACAGCAATCCATACAGCTTACTTGATAATACAGAATCCGATCA
GACTGCAGACACTGACGCCAGCGAATCTCACCACAGTACTAACCGTCGTAGGCGGTCTCGTAGA
CGGAGGACTGATGAAGATGCTGTTCTGATGGATGGACTGACTGAATCTGATACAGCCTCAGTTA
ATGAGAATGGGCTAGTCACAGTTGCAGATTATATTTCTAGAGCTGAGTCTCAGAGCAGACAAAG
AAACCTCCCAAGGGAAACTTTGGCTAAAAACAAGAAAGAAATGGCAAAAGATGTGATTGAAGAG
CATGGTCCTTCAGAAAAGGCAATAAATGGTCCAACTAGCGCTTCTGGCGATGAAATTCCTAAGC
TACCGCGTACTCTGGGAGAAGAAAAGACTAAGACCTTAAAAGAAGACAGCACTCAAGAAGCAGC
AGTCCTGAATGGTGTTTCATAACTGAAGGAAGTTCCTAGTTTACAGTTCTTTTACATTACAGTT
ACAATAGTGCTTGTACAAGCTTGCCAAAGATAGAATACGGATCGCCAGTCTTACATCGCACTTT
CAGTTCCTCCATTTGGAATTCAGAAAGGGGAGGGATCCTGAAGAAATCATATGTTAAACATACT
TTGACACCTACTGTGTTAAAAATATATCATCAGATGTGCCTTGAGAATAGTATATGTAACATTA
AAAAAAGTTGCTGGCTATAGGAAATGTTATTTTGTTTTCAAAATATGGCAGAGATGGGGGGAGG
TGGGTGGGGTGGGGTCCCTAACGTAATATTCTTTATGAAAGCATTAGCTGCTTTTGTTACATTT
TTAATAATATGCAACCACTTCTTCACCCGAGGAAAACTAGAATGAAGCAGTCTAAAATATTTTG
CACTGAATTGTAATTTCTTCATTAGTTTAGTCTGGAAACTGGTCTGTTTAATGTGTTTTTTAAA
TGCTGTTTGTAGAGGCAATTCTGCAGACCACTGGAAATACATGTTAACTCATCTGCAGGGATAC
TGGGTGATATTGGCAGTGACTGTTCTACATTGAGGCTTTGTTTGGTTTATTTATTAAAGTGTAC
AGTATTTAAAAATCAAACATAGCTTTAGTTGAAACACTAAGCTGATTAGTCATGTCCATTCAGA
CATAACCTGAACTACTGAAAAGATCAATTTCCAGAAGGTTTATTCTGTATAAACTACATGTTTA
GTCTTCAGTAGAGTACTTTTCACATTTTCTTTCTACCTTTTTTTTCTTTTTTTTTTTCTTCCCC
CCTTTTTTTGATTTTGGTTGTTTGATGTGCAATATGTTTTTGTATGCAGGTAGTAAAATAAACT
TTGATCTTCCATTTGCTGA

hide sequence

RefSeq Acc Id:

XM_036162897 ⟹ XP_036018790

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	3	34,074,264 - 34,124,129 (+)	NCBI

Sequence:

show sequence

GGCGGAGCTGACGGTGGAGGTTCGCGGCTCCAACGGGGCTTTCTACAAGTCTCTCCCACACCCT
AGGCTGGCTTTCAGCTTGTAGCCAAGATGACCTTGAGTTTGTGATCCTCCTGGAGTTGTCCTAC
TATTTTATAGTGTGCTGTGGATGGAGTGTTTGAAAATGGGAGGGATTTATCAAAGATGTCCACG
AAGACTCCCTCACAGTTGTTTTTGAAAATAATTGGCAACCAGAACGCCAGGTTCCGTTTAATGA
AGTGCGATTACCACCACCACCTGATATAAAAAAAGAAATTAGTGAAGGAGATGAAGTAGAGGTA
TATTCAAGAGCAAATGACCAAGAGCCATGTGGATGGTGGCTGGCTAAAGTTCGGATGATGAAAG
GCGAGTTTTATGTCATTGAATATGCTGCTTGTGATGCCACTTACAATGAAATAGTCACATTTGA
ACGACTTCGGCCTGTCAATCAAAATAAAACTGTCAAAAAAAATACCTTCTTTAAGTGCACAGTG
GATGTTCCTGAGGACCTGAGAGAAGCGTGTGCTAATGAAAATGCCCATAAAGATTTTAAGAAAG
CAGTAGGAGCATGCAGAATCTTTTATCATCCTGAAACTACCCAGCTAATGATACTGTCGGCCAG
TGAAGCAACTGTGAAGAGAGTAAATATCTTAAGTGATATGCATTTGAGAAGTATTCGGACGAAG
TTGATGCTTATGTCCAGAAATGAAGAGGCCACTAAGCATTTAGAATGCACAAAACAACTTGCAG
CAGCTTTTCATGAAGAATTTGTTGTGAGAGAAGATTTAATGGGCCTGGCGATAGGAACGCATGG
CAGTAACATACAGCAAGCTAGGAAGGTTCCTGGAGTTACTGCCATTGAGTTAGATGAAGACACC
GGAACGTTTAGAATCTATGGAGAGAGTGCTGAGGCTGTAAAAAAAGCTAGAGGTTTCTTGGAAT
TTGTGGAAGATTTTATTCAAGTTCCCAGGAATCTTGTTGGAAAAGTAATTGGAAAAAATGGCAA
AGTTATTCAAGAAATAGTGGATAAATCTGGTGTGGTTCGAGTAAGAATTGAAGGAGACAATGAA
AATAAACTACCTAGAGAAGACGGAATGGTTCCATTTGTATTTGTTGGCACTAAAGAAAGCATTG
GGAATGTGCAAGTTCTTCTAGAGTATCACATCGCTTACTTAAAGGAAGTGGAACAACTAAGAAT
GGAACGTCTGCAGATTGATGAGCAGCTGCGACAGATTGGTATGGGTTTCAGACCTTCTTCCACC
AGAGGGCCTGAAAGAGAGAAAGGATATGCCACTGATGAAAGTACCGTCTCTTCTGTACAAGGTT
CTAGGTCTTATAGTGGAAGAGGCAGAGGTCGTCGGGGCCCTAATTACACCTCCGGTTATGGTAC
AAATTCTGAGCTGTCTAACCCCTCCGAAACAGAATCTGAGCGTAAAGATGAGCTGAGTGATTGG
TCATTGGCAGGAGAAGATGATCGAGAGACTCGACATCAGCGAGACAGCAGGAGACGCCCAGGAG
GAAGAGGCAGAAGTGTTTCTGGGGGACGAGGTCGTGGTGGACCACGTGGTGGCAAATCCTCCAT
CAGTTCTGTGCTCAAAGATCCAGACAGCAATCCATACAGCTTACTTGATAATACAGAATCCGAT
CAGACTGCAGACACTGACGCCAGCGAATCTCACCACAGTACTAACCGTCGTAGGCGGTCTCGTA
GACGGAGGACTGATGAAGATGCTGTTCTGATGGATGGACTGACTGAATCTGATACAGCCTCAGT
TAATGAGAATGGGCTAGGCAAAAGATGTGATTGAAGAGCATGGTCCTTCAGAAAAGGCAATAAA
TGGTCCAACTAGCGCTTCTGGCGATGAAATTCCTAAGCTACCGCGTACTCTGGGAGAAGAAAAG
ACTAAGACCTTAAAAGAAGACAGCACTCAAGAAGCAGCAGTCCTGAATGGTGTTTCATAACTGA
AGGAAGTTCCTAGTTTACAGTTCTTTTACATTACAGTTACAATAGTGCTTGTACAAGCTTGCCA
AAGATAGAATACGGATCGCCAGTCTTACATCGCACTTTCAGTTCCTCCATTTGGAATTCAGAAA
GGGGAGGGATCCTGAAGAAATCATATGTTAAACATACTTTGACACCTACTGTGTTAAAAATATA
TCATCAGATGTGCCTTGAGAATAGTATATGTAACATTAAAAAAAGTTGCTGGCTATAGGAAATG
TTATTTTGTTTTCAAAATATGGCAGAGATGGGGGGAGGTGGGTGGGGTGGGGTCCCTAACGTAA
TATTCTTTATGAAAGCATTAGCTGCTTTTGTTACATTTTTAATAATATGCAACCACTTCTTCAC
CCGAGGAAAACTAGAATGAAGCAGTCTAAAATATTTTGCACTGAATTGTAATTTCTTCATTAGT
TTAGTCTGGAAACTGGTCTGTTTAATGTGTTTTTTAAATGCTGTTTGTAGAGGCAATTCTGCAG
ACCACTGGAAATACATGTTAACTCATCTGCAGGGATACTGGGTGATATTGGCAGTGACTGTTCT
ACATTGAGGCTTTGTTTGGTTTATTTATTAAAGTGTACAGTATTTAAAAATCAAACATAGCTTT
AGTTGAAACACTAAGCTGATTAGTCATGTCCATTCAGACATAACCTGAACTACTGAAAAGATCA
ATTTCCAGAAGGTTTATTCTGTATAAACTACATGTTTAGTCTTCAGTAGAGTACTTTTCACATT
TTCTTTCTACCTTTTTTTTCTTTTTTTTTTTCTTCCCCCCTTTTTTTGATTTTGGTTGTTTGAT
GTGCAATATGTTTTTGTATGCAGGTAGTAAAATAAACTTTGATCTTCCATTTGCTGA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001106659	(Get FASTA)	NCBI Sequence Viewer
	NP_001106660	(Get FASTA)	NCBI Sequence Viewer
	NP_001415403	(Get FASTA)	NCBI Sequence Viewer
	NP_001415404	(Get FASTA)	NCBI Sequence Viewer
	NP_001415405	(Get FASTA)	NCBI Sequence Viewer
	NP_032079	(Get FASTA)	NCBI Sequence Viewer
	XP_006535463	(Get FASTA)	NCBI Sequence Viewer
	XP_006535464	(Get FASTA)	NCBI Sequence Viewer
	XP_006535465	(Get FASTA)	NCBI Sequence Viewer
	XP_036018788	(Get FASTA)	NCBI Sequence Viewer
	XP_036018789	(Get FASTA)	NCBI Sequence Viewer
	XP_036018790	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAD30211	(Get FASTA)	NCBI Sequence Viewer
	AAD30212	(Get FASTA)	NCBI Sequence Viewer
	AAD30213	(Get FASTA)	NCBI Sequence Viewer
	AAD30214	(Get FASTA)	NCBI Sequence Viewer
	AAD30215	(Get FASTA)	NCBI Sequence Viewer
	AAD30216	(Get FASTA)	NCBI Sequence Viewer
	AAD30217	(Get FASTA)	NCBI Sequence Viewer
	AAD30218	(Get FASTA)	NCBI Sequence Viewer
	AAH19139	(Get FASTA)	NCBI Sequence Viewer
	BAC33624	(Get FASTA)	NCBI Sequence Viewer
	CAA62383	(Get FASTA)	NCBI Sequence Viewer
	EDL35035	(Get FASTA)	NCBI Sequence Viewer
	EDL35036	(Get FASTA)	NCBI Sequence Viewer
	EDL35037	(Get FASTA)	NCBI Sequence Viewer
	EDL35038	(Get FASTA)	NCBI Sequence Viewer
	EDL35039	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000001620
	ENSMUSP00000001620.9
	ENSMUSP00000130216.3
	ENSMUSP00000142441
	ENSMUSP00000142441.2
	ENSMUSP00000142847
	ENSMUSP00000142847.2
	ENSMUSP00000143392
	ENSMUSP00000143392.2
	ENSMUSP00000143562.2
	ENSMUSP00000143614.2
GenBank Protein	Q61584	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_032079 ⟸ NM_008053
- Peptide Label:	isoform 3
- UniProtKB:	A0A0H2UH27 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAELTVEVRGSNGAFYKGFIKDVHEDSLTVVFENNWQPERQVPFNEVRLPPPPDIKKEISEGDE VEVYSRANDQEPCGWWLAKVRMMKGEFYVIEYAACDATYNEIVTFERLRPVNQNKTVKKNTFFK CTVDVPEDLREACANENAHKDFKKAVGACRIFYHPETTQLMILSASEATVKRVNILSDMHLRSI RTKLMLMSRNEEATKHLECTKQLAAAFHEEFVVREDLMGLAIGTHGSNIQQARKVPGVTAIELD EDTGTFRIYGESAEAVKKARGFLEFVEDFIQVPRNLVGKVIGKNGKVIQEIVDKSGVVRVRIEG DNENKLPREDGMVPFVFVGTKESIGNVQVLLEYHIAYLKEVEQLRMERLQIDEQLRQIGSRSYS GRGRGRRGPNYTSGYGTNSELSNPSETESERKDELSDWSLAGEDDRETRHQRDSRRRPGGRGRS VSGGRGRGGPRGGKSSISSVLKDPDSNPYSLLDNTESDQTADTDASESHHSTNRRRRSRRRRTD EDAVLMDGLTESDTASVNENGLGKRCD hide sequence

RefSeq Acc Id:	NP_001106659 ⟸ NM_001113188
- Peptide Label:	isoform 1
- UniProtKB:	Q9WUA8 (UniProtKB/Swiss-Prot), Q9WUA7 (UniProtKB/Swiss-Prot), Q9R1E5 (UniProtKB/Swiss-Prot), Q9R1E4 (UniProtKB/Swiss-Prot), Q9R1E3 (UniProtKB/Swiss-Prot), Q9R1E2 (UniProtKB/Swiss-Prot), Q8VCU4 (UniProtKB/Swiss-Prot), Q9WUA9 (UniProtKB/Swiss-Prot), Q61584 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MAELTVEVRGSNGAFYKGFIKDVHEDSLTVVFENNWQPERQVPFNEVRLPPPPDIKKEISEGDE VEVYSRANDQEPCGWWLAKVRMMKGEFYVIEYAACDATYNEIVTFERLRPVNQNKTVKKNTFFK CTVDVPEDLREACANENAHKDFKKAVGACRIFYHPETTQLMILSASEATVKRVNILSDMHLRSI RTKLMLMSRNEEATKHLECTKQLAAAFHEEFVVREDLMGLAIGTHGSNIQQARKVPGVTAIELD EDTGTFRIYGESAEAVKKARGFLEFVEDFIQVPRNLVGKVIGKNGKVIQEIVDKSGVVRVRIEG DNENKLPREDGMVPFVFVGTKESIGNVQVLLEYHIAYLKEVEQLRMERLQIDEQLRQIGMGFRP SSTRGPEREKGYATDESTVSSVQGSRSYSGRGRGRRGPNYTSGYGTNSELSNPSETESERKDEL SDWSLAGEDDRETRHQRDSRRRPGGRGRSVSGGRGRGGPRGGKSSISSVLKDPDSNPYSLLDNT ESDQTADTDASESHHSTNRRRRSRRRRTDEDAVLMDGLTESDTASVNENGLDDSEKKPQRRNRS RRRRFRGQAEDRQPVTVADYISRAESQSRQRNLPRETLAKNKKEMAKDVIEEHGPSEKAINGPT SASGDEIPKLPRTLGEEKTKTLKEDSTQEAAVLNGVS hide sequence

RefSeq Acc Id:	NP_001106660 ⟸ NM_001113189
- Peptide Label:	isoform 2
- UniProtKB:	Q61584 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MAELTVEVRGSNGAFYKGFIKDVHEDSLTVVFENNWQPERQVPFNEVRLPPPPDIKKEISEGDE VEVYSRANDQEPCGWWLAKVRMMKGEFYVIEYAACDATYNEIVTFERLRPVNQNKTVKKNTFFK CTVDVPEDLREACANENAHKDFKKAVGACRIFYHPETTQLMILSASEATVKRVNILSDMHLRSI RTKLMLMSRNEEATKHLECTKQLAAAFHEEFVVREDLMGLAIGTHGSNIQQARKVPGVTAIELD EDTGTFRIYGESAEAVKKARGFLEFVEDFIQVPRNLVGKVIGKNGKVIQEIVDKSGVVRVRIEG DNENKLPREDGMVPFVFVGTKESIGNVQVLLEYHIAYLKEVEQLRMERLQIDEQLRQIGSRSYS GRGRGRRGPNYTSGYGTNSELSNPSETESERKDELSDWSLAGEDDRETRHQRDSRRRPGGRGRS VSGGRGRGGPRGGKSSISSVLKDPDSNPYSLLDNTESDQTADTDASESHHSTNRRRRSRRRRTD EDAVLMDGLTESDTASVNENGLVTVADYISRAESQSRQRNLPRETLAKNKKEMAKDVIEEHGPS EKAINGPTSASGDEIPKLPRTLGEEKTKTLKEDSTQEAAVLNGVS hide sequence

RefSeq Acc Id:	XP_006535463 ⟸ XM_006535400
- Peptide Label:	isoform X1
- UniProtKB:	Q61584 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MAELTVEVRGSNGAFYKGFIKDVHEDSLTVVFENNWQPERQVPFNEVRLPPPPDIKKEISEGDE VEVYSRANDQEPCGWWLAKVRMMKGEFYVIEYAACDATYNEIVTFERLRPVNQNKTVKKNTFFK CTVDVPEDLREACANENAHKDFKKAVGACRIFYHPETTQLMILSASEATVKRVNILSDMHLRSI RTKLMLMSRNEEATKHLECTKQLAAAFHEEFVVREDLMGLAIGTHGSNIQQARKVPGVTAIELD EDTGTFRIYGESAEAVKKARGFLEFVEDFIQVPRNLVGKVIGKNGKVIQEIVDKSGVVRVRIEG DNENKLPREDGMVPFVFVGTKESIGNVQVLLEYHIAYLKEVEQLRMERLQIDEQLRQIGMGFRP SSTRGPEREKGYATDESTVSSVQGSRSYSGRGRGRRGPNYTSGYGTNSELSNPSETESERKDEL SDWSLAGEDDRETRHQRDSRRRPGGRGRSVSGGRGRGGPRGGKSSISSVLKDPDSNPYSLLDNT ESDQTADTDASESHHSTNRRRRSRRRRTDEDAVLMDGLTESDTASVNENGLVTVADYISRAESQ SRQRNLPRETLAKNKKEMAKDVIEEHGPSEKAINGPTSASGDEIPKLPRTLGEEKTKTLKEDST QEAAVLNGVS hide sequence

RefSeq Acc Id:

XP_006535465 ⟸ XM_006535402

- Peptide Label:

isoform X4

- Sequence:

show sequence

MAELTVEVRGSNGAFYKGFIKDVHEDSLTVVFENNWQPERQVPFNEVRLPPPPDIKKEISEGDE
VEVYSRANDQEPCGWWLAKVRMMKGEFYVIEYAACDATYNEIVTFERLRPVNQNKTVKKNTFFK
CTVDVPEDLREACANENAHKDFKKAVGACRIFYHPETTQLMILSASEATVKRVNILSDMHLRSI
RTKLMLMSRNEEATKHLECTKQLAAAFHEEFVVREDLMGLAIGTHGSNIQQARKVPGVTAIELD
EDTGTFRIYGESAEAVKKARGFLEFVEDFIQVPRNLVGKVIGKNGKVIQEIVDKSGVVRVRIEG
DNENKLPREDGMVPFVFVGTKESIGNVQVLLEYHIAYLKEVEQLRMERLQIDEQLRQIGMGFRP
SSTRGPEREKGYATDESTVSSVQGSRSYSGRGRGRRGPNYTSGYGTNSELSNPSETESERKDEL
SDWSLAGEDDRETRHQRDSRRRPGGRGRSVSGGRGRGGPRGGKSSISSVLKDPDSNPYSLLDNT
ESDQTADTDASESHHSTNRRRRSRRRRTDEDAVLMDGLTESDTASVNENGLGKRCD

hide sequence

RefSeq Acc Id:	XP_006535464 ⟸ XM_006535401
- Peptide Label:	isoform X2
- UniProtKB:	Q61584 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MAELTVEVRGSNGAFYKGFIKDVHEDSLTVVFENNWQPERQVPFNEVRLPPPPDIKKEISEGDE VEVYSRANDQEPCGWWLAKVRMMKGEFYVIEYAACDATYNEIVTFERLRPVNQNKTVKKNTFFK CTVDVPEDLREACANENAHKDFKKAVGACRIFYHPETTQLMILSASEATVKRVNILSDMHLRSI RTKLMLMSRNEEATKHLECTKQLAAAFHEEFVVREDLMGLAIGTHGSNIQQARKVPGVTAIELD EDTGTFRIYGESAEAVKKARGFLEFVEDFIQVPRNLVGKVIGKNGKVIQEIVDKSGVVRVRIEG DNENKLPREDGMVPFVFVGTKESIGNVQVLLEYHIAYLKEVEQLRMERLQIDEQLRQIGSRSYS GRGRGRRGPNYTSGYGTNSELSNPSETESERKDELSDWSLAGEDDRETRHQRDSRRRPGGRGRS VSGGRGRGGPRGGKSSISSVLKDPDSNPYSLLDNTESDQTADTDASESHHSTNRRRRSRRRRTD EDAVLMDGLTESDTASVNENGLDDSEKKPQRRNRSRRRRFRGQAEDRQPVTVADYISRAESQSR QRNLPRETLAKNKKEMAKDVIEEHGPSEKAINGPTSASGDEIPKLPRTLGEEKTKTLKEDSTQE AAVLNGVS hide sequence

RefSeq Acc Id:

ENSMUSP00000142847 ⟸ ENSMUST00000198051

RefSeq Acc Id:

ENSMUSP00000142441 ⟸ ENSMUST00000197694

RefSeq Acc Id:

ENSMUSP00000143614 ⟸ ENSMUST00000197853

RefSeq Acc Id:

ENSMUSP00000001620 ⟸ ENSMUST00000001620

RefSeq Acc Id:

ENSMUSP00000130216 ⟸ ENSMUST00000167354

RefSeq Acc Id:

ENSMUSP00000143562 ⟸ ENSMUST00000200086

RefSeq Acc Id:

ENSMUSP00000143392 ⟸ ENSMUST00000200392

RefSeq Acc Id:	XP_036018790 ⟸ XM_036162897
- Peptide Label:	isoform X6
- UniProtKB:	A0A0H2UH27 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_036018788 ⟸ XM_036162895
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_036018789 ⟸ XM_036162896
- Peptide Label:	isoform X5

Protein Domains

Agenet-like Fragile X messenger ribonucleoprotein 1-like C- Fragile X-related protein 1 C-terminal region KH

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q61584-F1-model_v2	AlphaFold	Q61584	1-677	view protein structure

Promoters

RGD ID:

6833851

Promoter ID:

MM_KWN:34033

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

3T3L1_Day0, 3T3L1_Day1, 3T3L1_Day2, 3T3L1_Day3, 3T3L1_Day4, BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, ES_Cell, Kidney, Liver, Lung, MEF_B4, MEF_B6, Spleen

Transcripts:

ENSMUST00000091244, ENSMUST00000108197, ENSMUST00000108198, NM_001113188, NM_001113189, NM_008053, XM_001475742_GM3125

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	3	33,917,936 - 33,919,177 (-)	MPROMDB

RGD ID:

6833802

Promoter ID:

MM_KWN:34034

Type:

Non-CpG

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

Kidney, Liver

Transcripts:

UC008OXL.1

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	3	33,944,961 - 33,945,461 (+)	MPROMDB

RGD ID:

6833820

Promoter ID:

MM_KWN:34035

Type:

Non-CpG

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

Brain, Kidney, Liver, MEF_B6

Transcripts:

UC008OXN.1

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	3	33,957,011 - 33,957,511 (+)	MPROMDB

RGD ID:

6880470

Promoter ID:

EPDNEW_M3685

Type:

multiple initiation site

Name:

Fxr1_1

Description:

Mus musculus fragile X mental retardation gene 1, autosomal homolog, transcript variant 3, mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	3	34,020,102 - 34,020,162	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:104860	AgrOrtholog
Ensembl Genes	ENSMUSG00000027680	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript	ENSMUST00000001620	ENTREZGENE
	ENSMUST00000001620.13	UniProtKB/Swiss-Prot
	ENSMUST00000167354.8	UniProtKB/TrEMBL
	ENSMUST00000197694	ENTREZGENE
	ENSMUST00000197694.5	UniProtKB/Swiss-Prot
	ENSMUST00000197853.2	UniProtKB/TrEMBL
	ENSMUST00000198051	ENTREZGENE
	ENSMUST00000198051.5	UniProtKB/TrEMBL
	ENSMUST00000200086.5	UniProtKB/TrEMBL
	ENSMUST00000200392	ENTREZGENE
	ENSMUST00000200392.5	UniProtKB/Swiss-Prot
Gene3D-CATH	2.30.30.140	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	3.30.1370.10	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	Agenet-like_dom	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	FMR1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	FMRP_KH0	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	FXMRP1_C_core	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	FXR_C1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	FXR_C3	UniProtKB/Swiss-Prot
	KH_dom	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	KH_dom_type_1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	KH_dom_type_1_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	KH_I_FXR1_rpt1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	KH_I_FXR1_rpt2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	KH_I_FXR1_rpt3	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Tudor_Agenet_FXR1_rpt1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Tudor_Agenet_FXR1_rpt2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Tudor_FRX1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	mmu:14359	UniProtKB/Swiss-Prot
MGD	MGI:104860	ENTREZGENE
NCBI Gene	14359	ENTREZGENE
PANTHER	FRAGILE X MENTAL RETARDATION SYNDROME-RELATED PROTEIN 1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PTHR10603	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	Agenet	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	FXMRP1_C_core	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	FXR_C1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	FXR_C3	UniProtKB/Swiss-Prot
	KH_1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	KH_9	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Tudor_FRX1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Fxr1	PhenoGen
PROSITE	AGENET_LIKE	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	KH_TYPE_1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART	SM00322	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	SSF54791	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A0G2JEP0	ENTREZGENE, UniProtKB/TrEMBL
	A0A0G2JGH0_MOUSE	UniProtKB/TrEMBL
	A0A0G2JGL6_MOUSE	UniProtKB/TrEMBL
	A0A0H2UH27	ENTREZGENE, UniProtKB/TrEMBL
	FXR1_MOUSE	UniProtKB/Swiss-Prot, ENTREZGENE
	Q8C7U4_MOUSE	UniProtKB/TrEMBL
	Q8VCU4	ENTREZGENE
	Q9R1E2	ENTREZGENE
	Q9R1E3	ENTREZGENE
	Q9R1E4	ENTREZGENE
	Q9R1E5	ENTREZGENE
	Q9WUA7	ENTREZGENE
	Q9WUA8	ENTREZGENE
	Q9WUA9	ENTREZGENE
UniProt Secondary	Q8VCU4	UniProtKB/Swiss-Prot
	Q9R1E2	UniProtKB/Swiss-Prot
	Q9R1E3	UniProtKB/Swiss-Prot
	Q9R1E4	UniProtKB/Swiss-Prot
	Q9R1E5	UniProtKB/Swiss-Prot
	Q9WUA7	UniProtKB/Swiss-Prot
	Q9WUA8	UniProtKB/Swiss-Prot
	Q9WUA9	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2022-04-13	Fxr1	FMR1 autosomal homolog 1	Fxr1	fragile X mental retardation gene 1, autosomal homolog	Symbol and/or name change	5135510	APPROVED
2016-04-05	Fxr1	fragile X mental retardation gene 1, autosomal homolog	AI851072	expressed sequence AI851072	Data merged from RGD:1609067	737654	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

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