Ssial2_m QTL Report (Mus musculus) - Rat Genome Database

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QTL Registration

QTL: Ssial2_m (susceptibility to sialadenitis 2 (mouse)) Mus musculus

Symbol: Ssial2_m
Name: susceptibility to sialadenitis 2 (mouse)
RGD ID: 1301114
Trait: Not determined
LOD Score: Not Available
P Value: Not Available
Variance: Not Available
Position
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm39320,174,862 - 54,180,103MOUSEQTLGRCm39
GRCm38320,120,713 - 54,125,954MOUSEQTLGRCm38
MGSCv3319,995,496 - 55,995,496RGD
cM Map3syntenicMOUSEQTL
Cross Type: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Ssial2_mMousedigestive/alimentary phenotype  IEA 704405Created by mouse qtl pipelineMGIPMID:11937580
Ssial2_mMouseendocrine/exocrine gland phenotype  IEA 704405Created by mouse qtl pipelineMGIPMID:11937580
Ssial2_mMouseimmune system phenotype  IEA 704405Created by mouse qtl pipelineMGIPMID:11937580
Ssial2_mMousesalivary gland inflammation  IAGP 5509061 MGIPMID:11937580

#
Reference Title
Reference Citation
1. Mouse Genome Database (MGD) Mouse Genome Database (MGD)
2. Mouse MP Annotation Import Pipeline RGD automated import pipeline
PMID:11937580  



1 to 20 of 832 rows
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
733753Gyg1glycogenin 132017624820209228Mouse
39129545LOC109279876VISTA enhancer mm8632019858320200178Mouse
329966024LOC131337779STARR-seq mESC enhancer starr_0711232023563120237376Mouse
329969158LOC131337780STARR-seq mESC enhancer starr_0711332025491520256045Mouse
733834Cpa3carboxypeptidase A3, mast cell32026978020296373Mouse
9663729Gm31320predicted gene, 3132032027644120283720Mouse
9618950Mir7007microRNA 700732027645420276523Mouse
1618568Gm7428predicted gene 742832027793520278851Mouse
734226Cpb1carboxypeptidase B132030364320339681Mouse
329969006LOC131337781STARR-seq mESC enhancer starr_0711432033352020334491Mouse
10123Agtr1bangiotensin II receptor, type 1b32036863720421341Mouse
5143133Gm18426predicted gene, 1842632044517720446135Mouse
9618998Gm31466predicted gene, 3146632045666120560370Mouse
329967453LOC131337782STARR-seq mESC enhancer starr_0711632059171620592976Mouse
329966161LOC131337783STARR-seq mESC enhancer starr_0711732062955620630485Mouse
329965590LOC131337784STARR-seq mESC enhancer starr_0711832064791620648838Mouse
329964099LOC131337785STARR-seq mESC enhancer starr_0711932069694220698536Mouse
329966246LOC131337786STARR-seq mESC enhancer starr_0712032078440920785482Mouse
5143066Gm18491predicted gene, 1849132083663420838230Mouse
5143068Gm18493predicted gene, 1849332085865420860250Mouse

1 to 20 of 832 rows
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Expected Size
Chr
Start
Stop
Species
Match

1 to 10 of 54 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
4142399Aec1_mautoimmune exocrinopathy 1 (mouse)Not determined7586174102690034Mouse
14746977Manh53_mmandible shape 53 (mouse)33592528069925280Mouse
26884378Skwq6_mskull length QTL 6, 10 week (mouse)351907421102307316Mouse
15039332Nmrs6_mNAFLD-associated magnetic resonance shift 6 (mouse)33417074168170741Mouse
4141116Lgaq4_mlate growth adjusted QTL 4 (mouse)Not determined1024922183184946Mouse
1357584Splq6_mspleen weight QTL 6 (mouse)Not determined31024922183184946Mouse
26884382Bzwq1_mbi-zygomatic width QTL 1, 5 week (mouse)352207421137205761Mouse
1357585Manln3_mmandible length 3 (mouse)Not determined35262550986625745Mouse
26884380Skwq1_mskull length QTL 1, 5 week (mouse)343954435101607316Mouse
13464139Nhdlq17_mnon-HDL QTL 17 (mouse)35292318386923183Mouse

1 to 10 of 54 rows


Database
Acc Id
Source(s)
MGD MGI:2385532

Note Type Note Reference