Ect2 (ect2 oncogene) - Rat Genome Database

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Gene: Ect2 (ect2 oncogene) Mus musculus
Analyze
Symbol: Ect2
Name: ect2 oncogene
RGD ID: 1318345
MGI Page MGI
Description: Enables small GTPase binding activity. Involved in positive regulation of neuron differentiation and positive regulation of protein import into nucleus. Acts upstream of or within cell morphogenesis. Located in cytoplasm and nucleus. Is expressed in brain ventricular layer; liver; and rest of cerebellum marginal layer. Orthologous to human ECT2 (epithelial cell transforming 2); INTERACTS WITH 1,1-dichloroethene; 1,2-dimethylhydrazine; 2,2',4,4',5,5'-hexachlorobiphenyl.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: AI528536; epithelial cell-transforming sequence 2 oncogene; KIAA4037; mKIAA4037
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39327,151,371 - 27,208,402 (-)NCBIGRCm39mm39
GRCm39 Ensembl327,151,371 - 27,208,027 (-)Ensembl
GRCm38327,097,222 - 27,154,253 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl327,097,222 - 27,153,878 (-)EnsemblGRCm38mm10GRCm38
MGSCv37326,996,144 - 27,052,800 (-)NCBIGRCm37mm9NCBIm37
MGSCv36327,288,299 - 27,344,909 (-)NCBImm8
Celera327,060,619 - 27,116,904 (-)NCBICelera
Cytogenetic Map3A3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-epigallocatechin 3-gallate  (ISO)
1,1-dichloroethene  (EXP)
1,2-dimethylhydrazine  (EXP)
1-naphthyl isothiocyanate  (ISO)
17beta-estradiol  (ISO)
17beta-estradiol 3-benzoate  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (EXP)
2,2',5,5'-tetrachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-butoxyethanol  (EXP)
2-methylcholine  (ISO)
3-methylcholanthrene  (EXP)
4,4'-diaminodiphenylmethane  (ISO)
5-fluorouracil  (ISO)
acetamide  (ISO)
acrolein  (ISO)
aflatoxin B1  (ISO)
alpha-pinene  (ISO)
aristolochic acid  (ISO)
arsenite(3-)  (EXP)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
benzo[b]fluoranthene  (EXP)
bisphenol A  (ISO)
buta-1,3-diene  (EXP)
cadmium dichloride  (ISO)
calcitriol  (ISO)
carbon nanotube  (EXP)
chloroprene  (EXP)
cisplatin  (ISO)
cobalt dichloride  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
coumestrol  (ISO)
Cuprizon  (ISO)
cyclosporin A  (ISO)
deoxynivalenol  (ISO)
dichloroacetic acid  (EXP)
diclofenac  (EXP)
dicrotophos  (ISO)
dieldrin  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
endosulfan  (ISO)
Enterolactone  (ISO)
erythromycin estolate  (ISO)
folic acid  (EXP)
furan  (EXP,ISO)
genistein  (ISO)
gentamycin  (ISO)
glycidol  (ISO)
glycine betaine  (ISO)
heptachlor  (ISO)
hydrogen peroxide  (ISO)
ivermectin  (ISO)
ketamine  (ISO)
lithium atom  (ISO)
lithium hydride  (ISO)
lucanthone  (ISO)
methamphetamine  (ISO)
mirex  (ISO)
N-nitrosodiethylamine  (EXP)
N-nitrosodimethylamine  (ISO)
N-Nitrosopyrrolidine  (ISO)
nickel atom  (ISO)
ochratoxin A  (ISO)
oxaliplatin  (ISO)
ozone  (EXP,ISO)
paracetamol  (EXP,ISO)
PCB138  (EXP)
perfluorononanoic acid  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
phenformin  (ISO)
phenobarbital  (EXP)
pirinixic acid  (EXP)
piroxicam  (ISO)
potassium chromate  (ISO)
propiconazole  (EXP)
quercetin  (ISO)
resveratrol  (ISO)
rotenone  (ISO)
SB 431542  (ISO)
silicon dioxide  (EXP,ISO)
sodium arsenite  (EXP,ISO)
sodium dichromate  (EXP,ISO)
Soman  (ISO)
succimer  (EXP)
sunitinib  (ISO)
tamoxifen  (EXP)
testosterone  (ISO)
testosterone enanthate  (ISO)
tetrachloromethane  (EXP)
thioacetamide  (ISO)
titanium dioxide  (EXP,ISO)
topotecan  (ISO)
trichloroethene  (EXP)
trichostatin A  (ISO)
trimellitic anhydride  (EXP)
triptonide  (EXP)
valproic acid  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
1. MGD data from the GO Consortium
2. MGD IEA
3. RGD automated import pipeline
4. RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8464478   PMID:9691182   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:12520002   PMID:12582257   PMID:12904583   PMID:14610273  
PMID:14645260   PMID:14691545   PMID:14996723   PMID:15741177   PMID:16107646   PMID:16141072   PMID:16141073   PMID:16602821   PMID:17904126   PMID:18270576   PMID:18799693   PMID:19898483  
PMID:19996184   PMID:20141573   PMID:20360068   PMID:20660154   PMID:21267068   PMID:21350944   PMID:21677750   PMID:21873635   PMID:22387001   PMID:22701760   PMID:24154525   PMID:26410627  
PMID:26496610   PMID:27074761   PMID:27626380   PMID:28110998   PMID:29486195   PMID:30733279   PMID:31138677   PMID:31145635   PMID:32130910   PMID:32203420   PMID:32325033   PMID:32469866  


Genomics

Comparative Map Data
Ect2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39327,151,371 - 27,208,402 (-)NCBIGRCm39mm39
GRCm39 Ensembl327,151,371 - 27,208,027 (-)Ensembl
GRCm38327,097,222 - 27,154,253 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl327,097,222 - 27,153,878 (-)EnsemblGRCm38mm10GRCm38
MGSCv37326,996,144 - 27,052,800 (-)NCBIGRCm37mm9NCBIm37
MGSCv36327,288,299 - 27,344,909 (-)NCBImm8
Celera327,060,619 - 27,116,904 (-)NCBICelera
Cytogenetic Map3A3NCBI
ECT2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl3172,750,682 - 172,821,474 (+)EnsemblGRCh38hg38GRCh38
GRCh383172,750,694 - 172,829,273 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh373172,468,516 - 172,539,264 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 363173,951,336 - 174,021,957 (+)NCBINCBI36hg18NCBI36
Build 343173,954,999 - 174,021,965NCBI
Celera3170,871,530 - 170,938,230 (+)NCBI
Cytogenetic Map3q26.31NCBI
HuRef3169,839,394 - 169,910,198 (+)NCBIHuRef
CHM1_13172,431,384 - 172,502,159 (+)NCBICHM1_1
Ect2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.22109,975,813 - 110,037,911 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl2109,975,813 - 110,037,911 (-)Ensembl
Rnor_6.02112,769,385 - 112,831,476 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2112,769,385 - 112,831,476 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02132,490,047 - 132,552,138 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42112,969,261 - 113,001,056 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12112,915,386 - 112,971,181 (-)NCBI
Celera2105,188,023 - 105,250,067 (-)NCBICelera
Cytogenetic Map2q24NCBI
Ect2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554202,768,800 - 2,828,230 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554202,769,542 - 2,827,843 (+)NCBIChiLan1.0ChiLan1.0
ECT2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.13177,938,161 - 178,008,381 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3177,938,164 - 178,008,381 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v03169,756,885 - 169,828,087 (+)NCBIMhudiblu_PPA_v0panPan3
ECT2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13436,897,441 - 36,958,501 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3436,896,958 - 36,958,384 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3445,907,851 - 45,969,821 (+)NCBI
ROS_Cfam_1.03436,981,676 - 37,043,349 (+)NCBI
UMICH_Zoey_3.13436,919,236 - 36,980,903 (+)NCBI
UNSW_CanFamBas_1.03436,888,783 - 36,950,259 (+)NCBI
UU_Cfam_GSD_1.03437,146,019 - 37,207,403 (+)NCBI
Ect2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405602103,592,041 - 103,679,947 (+)NCBI
SpeTri2.0NW_0049367035,744 - 45,636 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ECT2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13111,248,134 - 111,314,828 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113111,248,215 - 111,310,746 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
ECT2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11516,612,738 - 16,685,455 (-)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl1516,612,443 - 16,685,386 (-)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366606325,373,942 - 25,446,633 (-)NCBIVero_WHO_p1.0
Ect2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473050,773,465 - 50,841,427 (+)NCBIHetGla_female_1.0hetGla2

Position Markers
AI528536  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38327,097,482 - 27,097,606UniSTSGRCm38
MGSCv37326,996,404 - 26,996,528UniSTSGRCm37
Celera327,060,879 - 27,061,003UniSTS
Cytogenetic Map3BUniSTS
Whitehead/MRC_RH3306.64UniSTS
L11316  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38327,098,122 - 27,098,305UniSTSGRCm38
MGSCv37326,997,044 - 26,997,227UniSTSGRCm37
Celera327,061,519 - 27,061,702UniSTS
Cytogenetic Map3BUniSTS
Whitehead_YAC3 UniSTS
Ect2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map3BUniSTS
cM Map3 UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
26884436Zlq3_mzygomatic length QTL 3, 10 week (mouse)33200000142700000Mouse
1300559Thypr3_mthymocyte proliferative response 3 (mouse)Not determined3447125538471355Mouse
1558925Hivan1_mHIV-associated nephropathy 1 (mouse)Not determined3752111468809613Mouse
4142399Aec1_mautoimmune exocrinopathy 1 (mouse)Not determined7521114102782718Mouse
4141563Lgq3_mlate growth QTL 3 (mouse)Not determined1018416183277639Mouse
1357440Hrtpq1_mheart weight percentage QTL 1 (mouse)Not determined31018416183277639Mouse
1357857Lvrq5_mliver weight QTL 5 (mouse)Not determined31018416183277639Mouse
1357584Splq6_mspleen weight QTL 6 (mouse)Not determined31018416183277639Mouse
4141116Lgaq4_mlate growth adjusted QTL 4 (mouse)Not determined1018416183277639Mouse
4141255W10q3_mweight 10 weeks QTL 3 (mouse)Not determined1018416183277639Mouse
39128206Lwq18_mliver weight QTL 18 (mouse)31018416183277639Mouse
1301358Eae20_mexperimental allergic encephalomyelitis 20 (mouse)Not determined31157630445576442Mouse
26884427Cvht4_mcranial vault height 4, 10 week (mouse)316000000109800000Mouse
13207570Tcq12_mtotal cholesterol QTL 12 (mouse)316450000130370000Mouse
4142092Tgq13_mtriglyceride QTL 13 (mouse)Not determined1823401952234019Mouse
1301114Ssial2_msusceptibility to sialadenitis 2 (mouse)Not determined32012071354125954Mouse
12904010Cfq8_mconditioned fear QTL 8 (mouse)32471406831277954Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1882
Count of miRNA genes:635
Interacting mature miRNAs:758
Transcripts:ENSMUST00000108296, ENSMUST00000108298, ENSMUST00000108300, ENSMUST00000124727, ENSMUST00000150061, ENSMUST00000175857, ENSMUST00000176242, ENSMUST00000176535, ENSMUST00000176780, ENSMUST00000176908, ENSMUST00000177055, ENSMUST00000184113
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001177625 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001177626 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_007900 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006535385 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006535386 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036162884 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC121099 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC165280 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK040174 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK157718 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK220452 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC023881 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC025565 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC032155 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC045614 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY070590 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CF735294 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466530 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CN702302 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L11316 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  LS482375 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000108296
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl327,176,027 - 27,207,961 (-)Ensembl
GRCm38.p6 Ensembl327,121,878 - 27,153,812 (-)Ensembl
RefSeq Acc Id: ENSMUST00000108298   ⟹   ENSMUSP00000103933
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl327,151,371 - 27,208,027 (-)Ensembl
GRCm38.p6 Ensembl327,097,222 - 27,153,878 (-)Ensembl
RefSeq Acc Id: ENSMUST00000108300   ⟹   ENSMUSP00000103935
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl327,151,371 - 27,208,010 (-)Ensembl
GRCm38.p6 Ensembl327,097,222 - 27,153,861 (-)Ensembl
RefSeq Acc Id: ENSMUST00000124727
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl327,185,612 - 27,191,285 (-)Ensembl
GRCm38.p6 Ensembl327,131,463 - 27,137,136 (-)Ensembl
RefSeq Acc Id: ENSMUST00000150061   ⟹   ENSMUSP00000135617
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl327,152,455 - 27,171,956 (-)Ensembl
GRCm38.p6 Ensembl327,098,306 - 27,117,807 (-)Ensembl
RefSeq Acc Id: ENSMUST00000175857   ⟹   ENSMUSP00000135208
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl327,200,177 - 27,207,931 (-)Ensembl
GRCm38.p6 Ensembl327,146,028 - 27,153,782 (-)Ensembl
RefSeq Acc Id: ENSMUST00000176242   ⟹   ENSMUSP00000135740
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl327,151,372 - 27,208,003 (-)Ensembl
GRCm38.p6 Ensembl327,097,223 - 27,153,854 (-)Ensembl
RefSeq Acc Id: ENSMUST00000176535   ⟹   ENSMUSP00000135630
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl327,200,117 - 27,207,977 (-)Ensembl
GRCm38.p6 Ensembl327,145,968 - 27,153,828 (-)Ensembl
RefSeq Acc Id: ENSMUST00000176780   ⟹   ENSMUSP00000134786
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl327,199,169 - 27,208,003 (-)Ensembl
GRCm38.p6 Ensembl327,145,020 - 27,153,854 (-)Ensembl
RefSeq Acc Id: ENSMUST00000176908
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl327,172,001 - 27,176,841 (-)Ensembl
GRCm38.p6 Ensembl327,117,852 - 27,122,692 (-)Ensembl
RefSeq Acc Id: ENSMUST00000177055   ⟹   ENSMUSP00000134744
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl327,200,133 - 27,207,959 (-)Ensembl
GRCm38.p6 Ensembl327,145,984 - 27,153,810 (-)Ensembl
RefSeq Acc Id: ENSMUST00000184113   ⟹   ENSMUSP00000139341
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl327,151,375 - 27,207,999 (-)Ensembl
GRCm38.p6 Ensembl327,097,226 - 27,153,850 (-)Ensembl
RefSeq Acc Id: ENSMUST00000196926
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl327,199,099 - 27,201,350 (-)Ensembl
GRCm38.p6 Ensembl327,144,950 - 27,147,201 (-)Ensembl
RefSeq Acc Id: NM_001177625   ⟹   NP_001171096
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39327,151,371 - 27,208,003 (-)NCBI
GRCm38327,097,222 - 27,153,854 (-)NCBI
MGSCv37326,996,144 - 27,052,800 (-)RGD
Celera327,060,619 - 27,116,904 (-)RGD
cM Map3 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001177626   ⟹   NP_001171097
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39327,151,371 - 27,208,027 (-)NCBI
GRCm38327,097,222 - 27,153,878 (-)NCBI
MGSCv37326,996,144 - 27,052,800 (-)RGD
Celera327,060,619 - 27,116,904 (-)RGD
cM Map3 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_007900   ⟹   NP_031926
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39327,151,371 - 27,208,003 (-)NCBI
GRCm38327,097,222 - 27,153,854 (-)NCBI
MGSCv37326,996,144 - 27,052,800 (-)RGD
Celera327,060,619 - 27,116,904 (-)RGD
cM Map3 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006535385   ⟹   XP_006535448
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39327,151,371 - 27,208,402 (-)NCBI
GRCm38327,097,222 - 27,154,253 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006535386   ⟹   XP_006535449
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39327,151,371 - 27,208,402 (-)NCBI
GRCm38327,097,222 - 27,154,253 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036162884   ⟹   XP_036018777
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39327,151,371 - 27,208,402 (-)NCBI
Reference Sequences
RefSeq Acc Id: NP_031926   ⟸   NM_007900
- Peptide Label: isoform 1
- UniProtKB: Q07139 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001171097   ⟸   NM_001177626
- Peptide Label: isoform 2
- UniProtKB: Q07139 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001171096   ⟸   NM_001177625
- Peptide Label: isoform 2
- UniProtKB: Q07139 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006535448   ⟸   XM_006535385
- Peptide Label: isoform X1
- UniProtKB: Q07139 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006535449   ⟸   XM_006535386
- Peptide Label: isoform X1
- UniProtKB: Q07139 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000139341   ⟸   ENSMUST00000184113
RefSeq Acc Id: ENSMUSP00000135617   ⟸   ENSMUST00000150061
RefSeq Acc Id: ENSMUSP00000134744   ⟸   ENSMUST00000177055
RefSeq Acc Id: ENSMUSP00000103933   ⟸   ENSMUST00000108298
RefSeq Acc Id: ENSMUSP00000103935   ⟸   ENSMUST00000108300
RefSeq Acc Id: ENSMUSP00000134786   ⟸   ENSMUST00000176780
RefSeq Acc Id: ENSMUSP00000135630   ⟸   ENSMUST00000176535
RefSeq Acc Id: ENSMUSP00000135740   ⟸   ENSMUST00000176242
RefSeq Acc Id: ENSMUSP00000135208   ⟸   ENSMUST00000175857
RefSeq Acc Id: XP_036018777   ⟸   XM_036162884
- Peptide Label: isoform X2
Protein Domains
BRCT   DH   PH

Promoters
RGD ID:6833690
Promoter ID:MM_KWN:33908
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B6
Transcripts:AK007279_1700125G22RIK,   ENSMUST00000029248,   ENSMUST00000108298,   ENSMUST00000108300,   NM_007900,   UC008OTK.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36327,051,681 - 27,053,067 (-)MPROMDB
RGD ID:6880352
Promoter ID:EPDNEW_M3627
Type:initiation region
Name:Ect2_1
Description:Mus musculus ect2 oncogene , transcript variant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M3628  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38327,153,822 - 27,153,882EPDNEW
RGD ID:6880360
Promoter ID:EPDNEW_M3628
Type:initiation region
Name:Ect2_2
Description:Mus musculus ect2 oncogene , transcript variant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M3627  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38327,153,925 - 27,153,985EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:95281 AgrOrtholog
Ensembl Genes ENSMUSG00000027699 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000103933 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000103935 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000134744 UniProtKB/TrEMBL
  ENSMUSP00000134786 UniProtKB/TrEMBL
  ENSMUSP00000135208 UniProtKB/TrEMBL
  ENSMUSP00000135617 UniProtKB/TrEMBL
  ENSMUSP00000135630 UniProtKB/TrEMBL
  ENSMUSP00000135740 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000139341 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000108298 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000108300 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000150061 UniProtKB/TrEMBL
  ENSMUST00000175857 UniProtKB/TrEMBL
  ENSMUST00000176242 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000176535 UniProtKB/TrEMBL
  ENSMUST00000176780 UniProtKB/TrEMBL
  ENSMUST00000177055 UniProtKB/TrEMBL
  ENSMUST00000184113 UniProtKB/TrEMBL
Gene3D-CATH 1.20.900.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.30.29.30 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.40.50.10190 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro BRCT_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  BRCT_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DBL_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DH-domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ect2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GDS_CDC24_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PH-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:13605 UniProtKB/Swiss-Prot
MGD MGI:95281 ENTREZGENE
NCBI Gene 13605 ENTREZGENE
PANTHER PTHR16777 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam BRCT UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTCB-BRCT UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RhoGEF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Ect2 PhenoGen
PROSITE BRCT UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DH_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DH_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART BRCT UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RhoGEF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF48065 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF52113 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A2X0SFE3_MOUSE UniProtKB/TrEMBL
  ECT2_MOUSE UniProtKB/Swiss-Prot
  H3BIW1_MOUSE UniProtKB/TrEMBL
  H3BIZ5_MOUSE UniProtKB/TrEMBL
  H3BK10_MOUSE UniProtKB/TrEMBL
  H3BL18_MOUSE UniProtKB/TrEMBL
  H3BL29_MOUSE UniProtKB/TrEMBL
  Q07139 ENTREZGENE
  Q8C9Y7_MOUSE UniProtKB/TrEMBL
  V9GXV8_MOUSE UniProtKB/TrEMBL
UniProt Secondary Q3TZP2 UniProtKB/Swiss-Prot
  Q5DTR8 UniProtKB/Swiss-Prot
  Q80VE4 UniProtKB/Swiss-Prot
  Q8CIH2 UniProtKB/Swiss-Prot
  Q8K2A0 UniProtKB/Swiss-Prot
  Q8R3E2 UniProtKB/Swiss-Prot