Pex5l (peroxisomal biogenesis factor 5-like) - Rat Genome Database

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Gene: Pex5l (peroxisomal biogenesis factor 5-like) Mus musculus
Analyze
Symbol: Pex5l
Name: peroxisomal biogenesis factor 5-like
RGD ID: 1552463
MGI Page MGI
Description: Predicted to enable intracellularly cyclic nucleotide-activated monoatomic cation channel activity; peroxisome matrix targeting signal-1 binding activity; and small GTPase binding activity. Acts upstream of or within maintenance of protein location and regulation of membrane potential. Located in cytoplasm and dendrite. Is expressed in brain; cerebral cortex; and retina outer nuclear layer. Orthologous to human PEX5L (peroxisomal biogenesis factor 5 like).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 1700016J08Rik; peroxin 2; peroxin-5-related protein; peroxisomal biogenesis factor 5-like protein transcript variant 10; peroxisomal biogenesis factor 5-like protein transcript variant 11; peroxisomal biogenesis factor 5-like protein transcript variant 12; peroxisomal targeting signal 1 receptor-like; Pex; Pex2; PEX2-related protein; PEX5-like protein; PEX5-related protein; pex5Rp; PX; PXR2; RIKEN cDNA 1700016J08 gene; tetratricopeptide repeat-containing Rab8b-interacting protein; TRI; TRIP8b
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39333,002,075 - 33,197,470 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl333,003,557 - 33,197,396 (-)EnsemblGRCm39 Ensembl
GRCm38332,947,926 - 33,143,302 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl332,949,408 - 33,143,247 (-)EnsemblGRCm38mm10GRCm38
MGSCv37332,848,553 - 33,042,004 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36333,142,161 - 33,274,578 (-)NCBIMGSCv36mm8
Celera332,856,737 - 33,053,168 (-)NCBICelera
Cytogenetic Map3A3NCBI
cM Map315.94NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. Mouse MP Annotation Import Pipeline RGD automated import pipeline
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:15226823   PMID:15564593   PMID:16141072   PMID:16141073   PMID:16452087   PMID:16602821   PMID:17114649   PMID:17393522  
PMID:19439603   PMID:19555649   PMID:21267068   PMID:21504900   PMID:21555075   PMID:21593326   PMID:21677750   PMID:21873635   PMID:21903356   PMID:22363812   PMID:22550182   PMID:22794259  
PMID:23077068   PMID:23382219   PMID:23382386   PMID:23966674   PMID:24319055   PMID:24409334   PMID:24952961   PMID:26459112   PMID:28213444   PMID:28671696   PMID:29168010   PMID:29662202  
PMID:29953635   PMID:31492750   PMID:31932764   PMID:33946275   PMID:34163074  


Genomics

Comparative Map Data
Pex5l
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39333,002,075 - 33,197,470 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl333,003,557 - 33,197,396 (-)EnsemblGRCm39 Ensembl
GRCm38332,947,926 - 33,143,302 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl332,949,408 - 33,143,247 (-)EnsemblGRCm38mm10GRCm38
MGSCv37332,848,553 - 33,042,004 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36333,142,161 - 33,274,578 (-)NCBIMGSCv36mm8
Celera332,856,737 - 33,053,168 (-)NCBICelera
Cytogenetic Map3A3NCBI
cM Map315.94NCBI
PEX5L
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383179,794,958 - 180,036,937 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3179,794,958 - 180,037,053 (-)EnsemblGRCh38hg38GRCh38
GRCh373179,512,746 - 179,754,725 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 363181,000,744 - 181,237,211 (-)NCBINCBI36Build 36hg18NCBI36
Build 343181,000,751 - 181,237,219NCBI
Celera3177,948,972 - 178,186,430 (-)NCBICelera
Cytogenetic Map3q26.33NCBI
HuRef3176,916,268 - 177,158,948 (-)NCBIHuRef
CHM1_13179,475,820 - 179,718,112 (-)NCBICHM1_1
T2T-CHM13v2.03182,598,483 - 182,840,049 (-)NCBIT2T-CHM13v2.0
Pex5l
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82117,623,199 - 117,836,772 (-)NCBIGRCr8
mRatBN7.22115,694,868 - 115,908,365 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2115,700,972 - 115,913,628 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2122,300,502 - 122,514,052 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02120,413,149 - 120,626,695 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02115,115,247 - 115,325,579 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02119,330,330 - 119,405,809 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2119,330,080 - 119,537,837 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02138,979,958 - 139,053,451 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42119,130,798 - 119,203,567 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12119,075,759 - 119,284,697 (-)NCBI
Celera2110,803,018 - 110,875,273 (-)NCBICelera
Cytogenetic Map2q24NCBI
Pex5l
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554208,930,992 - 9,146,215 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554208,924,399 - 9,146,309 (-)NCBIChiLan1.0ChiLan1.0
PEX5L
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22177,660,144 - 177,901,817 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13177,664,861 - 177,906,523 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03176,823,918 - 177,065,528 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13184,993,866 - 185,238,100 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3184,999,947 - 185,237,645 (-)Ensemblpanpan1.1panPan2
PEX5L
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13413,187,814 - 13,502,508 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3413,187,807 - 13,416,827 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3417,339,445 - 17,585,549 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03413,085,931 - 13,400,886 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3413,048,375 - 13,315,162 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13413,131,125 - 13,451,357 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03413,113,787 - 13,433,984 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03413,359,766 - 13,675,044 (-)NCBIUU_Cfam_GSD_1.0
Pex5l
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405602109,809,710 - 110,025,608 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365663,195,553 - 3,404,705 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365663,195,110 - 3,411,037 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PEX5L
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13117,833,705 - 118,088,277 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113117,832,199 - 118,088,383 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213126,930,082 - 127,046,550 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PEX5L
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1159,373,826 - 9,613,276 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366606318,228,983 - 18,472,873 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pex5l
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473057,504,302 - 57,762,999 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473057,504,554 - 57,763,423 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Pex5l
6534 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2038
Count of miRNA genes:626
Interacting mature miRNAs:785
Transcripts:ENSMUST00000078226, ENSMUST00000108219, ENSMUST00000108221, ENSMUST00000108224, ENSMUST00000108225, ENSMUST00000108226, ENSMUST00000123218, ENSMUST00000155264
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142399Aec1_mautoimmune exocrinopathy 1 (mouse)Not determined7586174102690034Mouse
4141116Lgaq4_mlate growth adjusted QTL 4 (mouse)Not determined1024922183184946Mouse
1357584Splq6_mspleen weight QTL 6 (mouse)Not determined31024922183184946Mouse
4141563Lgq3_mlate growth QTL 3 (mouse)Not determined1024922183184946Mouse
1301114Ssial2_msusceptibility to sialadenitis 2 (mouse)Not determined32017486254180103Mouse
26884436Zlq3_mzygomatic length QTL 3, 10 week (mouse)33265060142405761Mouse
26884427Cvht4_mcranial vault height 4, 10 week (mouse)316054164109707316Mouse
1300961Bh4p_mbar holding four paws (mouse)Not determined33183785465837997Mouse
4142092Tgq13_mtriglyceride QTL 13 (mouse)Not determined1828816852288168Mouse
1357440Hrtpq1_mheart weight percentage QTL 1 (mouse)Not determined31024922183184946Mouse
4141255W10q3_mweight 10 weeks QTL 3 (mouse)Not determined1024922183184946Mouse
12910781Pwgrq12_mpost-weaning growth rate QTL 12 (mouse)33263576058017363Mouse
1558925Hivan1_mHIV-associated nephropathy 1 (mouse)Not determined3758617468716946Mouse
1302056Orgwq4_morgan weight QTL 4 (mouse)Not determined330067588147304689Mouse
39128206Lwq18_mliver weight QTL 18 (mouse)31024922183184946Mouse
13207570Tcq12_mtotal cholesterol QTL 12 (mouse)316504164130163649Mouse
1300559Thypr3_mthymocyte proliferative response 3 (mouse)Not determined3452541938525519Mouse
26884422Cvht7_mcranial vault height 7, 16 week (mouse)328954149118893649Mouse
1301358Eae20_mexperimental allergic encephalomyelitis 20 (mouse)Not determined31163045345630591Mouse
12910778Pwgrq13_mpost-weaning growth rate QTL 13 (mouse)33263576058017363Mouse

Markers in Region
D3Mit181  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38333,066,608 - 33,066,696UniSTSGRCm38
MGSCv37332,965,530 - 32,965,618UniSTSGRCm37
Celera332,974,600 - 32,974,690UniSTS
Cytogenetic Map3BUniSTS
cM Map318.5UniSTS
Whitehead Genetic313.1UniSTS
D3Mit181.2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38333,066,733 - 33,066,890UniSTSGRCm38
MGSCv37332,965,655 - 32,965,812UniSTSGRCm37
Celera332,974,727 - 32,974,884UniSTS
Cytogenetic Map3BUniSTS
cM Map318.5UniSTS
cM Map3 UniSTS
Whitehead_YAC3 UniSTS
D3Mit272  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38333,007,369 - 33,007,465UniSTSGRCm38
MGSCv37332,906,291 - 32,906,387UniSTSGRCm37
Celera332,916,821 - 32,916,917UniSTS
Cytogenetic Map3BUniSTS
cM Map316.5UniSTS
Whitehead Genetic313.1UniSTS
D3Mit273  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38333,049,723 - 33,049,839UniSTSGRCm38
MGSCv37332,948,645 - 32,948,761UniSTSGRCm37
Celera332,957,683 - 32,957,801UniSTS
Cytogenetic Map3BUniSTS
cM Map316.5UniSTS
Whitehead Genetic313.1UniSTS
Whitehead/MRC_RH3373.75UniSTS
D9S1872  
Mouse AssemblyChrPosition (strand)SourceJBrowse
MGSCv37226,031,736 - 26,031,811UniSTSGRCm37
Celera225,898,738 - 25,898,813UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001163516 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001163517 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001289505 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001310460 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_021483 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006535506 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006535507 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006535508 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011249688 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011249689 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011249690 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011249691 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011249692 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011249693 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011249694 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011249695 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011249696 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011249697 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011249698 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011249699 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011249700 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011249701 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011249702 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011249703 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030252740 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036163200 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036163202 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036163203 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB032591 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC116723 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC119877 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK006035 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK034497 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK039764 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK042235 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK044552 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK083141 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AW123005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY129053 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CB519585 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466530 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CX236501 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ646186 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ646187 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ646188 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ646189 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ646190 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ646191 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ646192 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ646193 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ646194 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ646195 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ646196 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ646197 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000078226   ⟹   ENSMUSP00000077353
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl333,003,783 - 33,137,178 (-)Ensembl
GRCm38.p6 Ensembl332,949,634 - 33,083,029 (-)Ensembl
Ensembl Acc Id: ENSMUST00000108219
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl333,008,486 - 33,197,396 (-)Ensembl
GRCm38.p6 Ensembl332,954,337 - 33,143,247 (-)Ensembl
Ensembl Acc Id: ENSMUST00000108221   ⟹   ENSMUSP00000103856
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl333,004,779 - 33,039,228 (-)Ensembl
GRCm38.p6 Ensembl332,950,630 - 32,985,079 (-)Ensembl
Ensembl Acc Id: ENSMUST00000108224   ⟹   ENSMUSP00000103859
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl333,004,103 - 33,137,184 (-)Ensembl
GRCm38.p6 Ensembl332,949,954 - 33,083,035 (-)Ensembl
Ensembl Acc Id: ENSMUST00000108225   ⟹   ENSMUSP00000103860
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl333,003,557 - 33,136,217 (-)Ensembl
GRCm38.p6 Ensembl332,949,408 - 33,082,068 (-)Ensembl
Ensembl Acc Id: ENSMUST00000108226   ⟹   ENSMUSP00000103861
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl333,004,103 - 33,197,231 (-)Ensembl
GRCm38.p6 Ensembl332,949,954 - 33,143,082 (-)Ensembl
Ensembl Acc Id: ENSMUST00000155264
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl333,185,715 - 33,197,225 (-)Ensembl
GRCm38.p6 Ensembl333,131,566 - 33,143,076 (-)Ensembl
Ensembl Acc Id: ENSMUST00000192093   ⟹   ENSMUSP00000141387
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl333,003,557 - 33,137,209 (-)Ensembl
GRCm38.p6 Ensembl332,949,408 - 33,083,060 (-)Ensembl
Ensembl Acc Id: ENSMUST00000193289   ⟹   ENSMUSP00000142008
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl333,003,557 - 33,137,209 (-)Ensembl
GRCm38.p6 Ensembl332,949,408 - 33,083,060 (-)Ensembl
Ensembl Acc Id: ENSMUST00000193681   ⟹   ENSMUSP00000141454
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl333,003,557 - 33,137,209 (-)Ensembl
GRCm38.p6 Ensembl332,949,408 - 33,083,060 (-)Ensembl
Ensembl Acc Id: ENSMUST00000194016   ⟹   ENSMUSP00000142196
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl333,003,557 - 33,137,209 (-)Ensembl
GRCm38.p6 Ensembl332,949,408 - 33,083,060 (-)Ensembl
Ensembl Acc Id: ENSMUST00000194627
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl333,194,119 - 33,197,332 (-)Ensembl
GRCm38.p6 Ensembl333,139,970 - 33,143,183 (-)Ensembl
RefSeq Acc Id: NM_001163516   ⟹   NP_001156988
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39333,002,075 - 33,197,340 (-)NCBI
GRCm38332,947,926 - 33,143,191 (-)NCBI
MGSCv37332,848,553 - 33,042,004 (-)RGD
Celera332,856,740 - 33,053,194 (-)NCBI
cM Map3 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001163517   ⟹   NP_001156989
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39333,002,075 - 33,039,228 (-)NCBI
GRCm38332,947,926 - 32,985,079 (-)NCBI
MGSCv37332,848,553 - 33,042,004 (-)RGD
Celera332,856,740 - 33,053,194 (-)NCBI
cM Map3 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001289505   ⟹   NP_001276434
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39333,002,075 - 33,137,209 (-)NCBI
GRCm38332,947,926 - 33,083,060 (-)NCBI
Celera332,856,740 - 33,053,194 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001310460   ⟹   NP_001297389
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39333,002,075 - 33,137,209 (-)NCBI
GRCm38332,947,926 - 33,083,060 (-)NCBI
Sequence:
RefSeq Acc Id: NM_021483   ⟹   NP_067458
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39333,002,075 - 33,137,209 (-)NCBI
GRCm38332,947,926 - 33,083,060 (-)NCBI
MGSCv37332,848,553 - 33,042,004 (-)RGD
Celera332,856,740 - 33,053,194 (-)NCBI
cM Map3 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006535506   ⟹   XP_006535569
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39333,003,780 - 33,197,470 (-)NCBI
GRCm38332,949,631 - 33,143,302 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006535507   ⟹   XP_006535570
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39333,003,780 - 33,197,451 (-)NCBI
GRCm38332,949,631 - 33,143,302 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006535508   ⟹   XP_006535571
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39333,003,780 - 33,197,420 (-)NCBI
GRCm38332,949,631 - 33,143,273 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011249688   ⟹   XP_011247990
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39333,003,780 - 33,142,548 (-)NCBI
GRCm38332,949,631 - 33,088,399 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011249689   ⟹   XP_011247991
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39333,003,780 - 33,142,548 (-)NCBI
GRCm38332,949,631 - 33,088,399 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011249690   ⟹   XP_011247992
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39333,003,780 - 33,142,548 (-)NCBI
GRCm38332,949,631 - 33,088,399 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011249691   ⟹   XP_011247993
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39333,003,780 - 33,142,548 (-)NCBI
GRCm38332,949,631 - 33,088,399 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011249692   ⟹   XP_011247994
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39333,003,780 - 33,142,548 (-)NCBI
GRCm38332,949,631 - 33,088,399 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011249693   ⟹   XP_011247995
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39333,003,780 - 33,197,421 (-)NCBI
GRCm38332,949,631 - 33,143,274 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011249694   ⟹   XP_011247996
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39333,003,780 - 33,197,421 (-)NCBI
GRCm38332,949,631 - 33,143,273 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011249695   ⟹   XP_011247997
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39333,003,780 - 33,142,548 (-)NCBI
GRCm38332,949,631 - 33,088,399 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011249696   ⟹   XP_011247998
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39333,003,780 - 33,197,421 (-)NCBI
GRCm38332,949,631 - 33,143,273 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011249697   ⟹   XP_011247999
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39333,003,780 - 33,197,421 (-)NCBI
GRCm38332,949,631 - 33,143,273 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011249698   ⟹   XP_011248000
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39333,003,780 - 33,142,548 (-)NCBI
GRCm38332,949,631 - 33,088,399 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011249699   ⟹   XP_011248001
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39333,003,780 - 33,142,548 (-)NCBI
GRCm38332,949,631 - 33,088,399 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011249700   ⟹   XP_011248002
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39333,003,780 - 33,142,548 (-)NCBI
GRCm38332,949,631 - 33,088,399 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011249701   ⟹   XP_011248003
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39333,003,780 - 33,197,421 (-)NCBI
GRCm38332,949,631 - 33,143,273 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011249702   ⟹   XP_011248004
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39333,003,780 - 33,142,548 (-)NCBI
GRCm38332,949,631 - 33,088,399 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011249703   ⟹   XP_011248005
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39333,003,780 - 33,142,548 (-)NCBI
GRCm38332,949,631 - 33,088,399 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030252740   ⟹   XP_030108600
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39333,003,780 - 33,142,548 (-)NCBI
GRCm38332,949,631 - 33,088,399 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036163200   ⟹   XP_036019093
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39333,003,780 - 33,197,420 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036163202   ⟹   XP_036019095
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39333,003,780 - 33,142,548 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036163203   ⟹   XP_036019096
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39333,003,780 - 33,142,548 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001156988 (Get FASTA)   NCBI Sequence Viewer  
  NP_001156989 (Get FASTA)   NCBI Sequence Viewer  
  NP_001276434 (Get FASTA)   NCBI Sequence Viewer  
  NP_001297389 (Get FASTA)   NCBI Sequence Viewer  
  NP_067458 (Get FASTA)   NCBI Sequence Viewer  
  XP_006535569 (Get FASTA)   NCBI Sequence Viewer  
  XP_006535570 (Get FASTA)   NCBI Sequence Viewer  
  XP_006535571 (Get FASTA)   NCBI Sequence Viewer  
  XP_011247990 (Get FASTA)   NCBI Sequence Viewer  
  XP_011247991 (Get FASTA)   NCBI Sequence Viewer  
  XP_011247992 (Get FASTA)   NCBI Sequence Viewer  
  XP_011247993 (Get FASTA)   NCBI Sequence Viewer  
  XP_011247994 (Get FASTA)   NCBI Sequence Viewer  
  XP_011247995 (Get FASTA)   NCBI Sequence Viewer  
  XP_011247996 (Get FASTA)   NCBI Sequence Viewer  
  XP_011247997 (Get FASTA)   NCBI Sequence Viewer  
  XP_011247998 (Get FASTA)   NCBI Sequence Viewer  
  XP_011247999 (Get FASTA)   NCBI Sequence Viewer  
  XP_011248000 (Get FASTA)   NCBI Sequence Viewer  
  XP_011248001 (Get FASTA)   NCBI Sequence Viewer  
  XP_011248002 (Get FASTA)   NCBI Sequence Viewer  
  XP_011248003 (Get FASTA)   NCBI Sequence Viewer  
  XP_011248004 (Get FASTA)   NCBI Sequence Viewer  
  XP_011248005 (Get FASTA)   NCBI Sequence Viewer  
  XP_030108600 (Get FASTA)   NCBI Sequence Viewer  
  XP_036019093 (Get FASTA)   NCBI Sequence Viewer  
  XP_036019095 (Get FASTA)   NCBI Sequence Viewer  
  XP_036019096 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AEH94551 (Get FASTA)   NCBI Sequence Viewer  
  AEH94552 (Get FASTA)   NCBI Sequence Viewer  
  AEH94553 (Get FASTA)   NCBI Sequence Viewer  
  AEH94554 (Get FASTA)   NCBI Sequence Viewer  
  AEH94555 (Get FASTA)   NCBI Sequence Viewer  
  AEH94556 (Get FASTA)   NCBI Sequence Viewer  
  AEH94557 (Get FASTA)   NCBI Sequence Viewer  
  AEH94558 (Get FASTA)   NCBI Sequence Viewer  
  AEH94559 (Get FASTA)   NCBI Sequence Viewer  
  AEH94560 (Get FASTA)   NCBI Sequence Viewer  
  AEH94561 (Get FASTA)   NCBI Sequence Viewer  
  AEH94562 (Get FASTA)   NCBI Sequence Viewer  
  BAA92877 (Get FASTA)   NCBI Sequence Viewer  
  BAB24376 (Get FASTA)   NCBI Sequence Viewer  
  BAC38781 (Get FASTA)   NCBI Sequence Viewer  
  EDL35017 (Get FASTA)   NCBI Sequence Viewer  
  EDL35018 (Get FASTA)   NCBI Sequence Viewer  
  EDL35019 (Get FASTA)   NCBI Sequence Viewer  
  EDL35020 (Get FASTA)   NCBI Sequence Viewer  
  EDL35021 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000077353.4
  ENSMUSP00000103856
  ENSMUSP00000103856.2
  ENSMUSP00000103859
  ENSMUSP00000103859.2
  ENSMUSP00000103860.4
  ENSMUSP00000103861
  ENSMUSP00000103861.2
  ENSMUSP00000141387
  ENSMUSP00000141387.2
  ENSMUSP00000141454
  ENSMUSP00000141454.2
  ENSMUSP00000142008
  ENSMUSP00000142008.2
  ENSMUSP00000142196.2
GenBank Protein Q8C437 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_067458   ⟸   NM_021483
- Peptide Label: isoform 1
- UniProtKB: Q9JMB9 (UniProtKB/Swiss-Prot),   Q9DAA1 (UniProtKB/Swiss-Prot),   Q8CA31 (UniProtKB/Swiss-Prot),   Q8C437 (UniProtKB/Swiss-Prot),   F8SLQ3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001156988   ⟸   NM_001163516
- Peptide Label: isoform 2
- UniProtKB: Q9JMB9 (UniProtKB/Swiss-Prot),   Q9DAA1 (UniProtKB/Swiss-Prot),   Q8CA31 (UniProtKB/Swiss-Prot),   Q8C437 (UniProtKB/Swiss-Prot),   F8SLP9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001156989   ⟸   NM_001163517
- Peptide Label: isoform 3
- UniProtKB: F8SLQ6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006535570   ⟸   XM_006535507
- Peptide Label: isoform X15
- UniProtKB: Q9JMB9 (UniProtKB/Swiss-Prot),   Q9DAA1 (UniProtKB/Swiss-Prot),   Q8CA31 (UniProtKB/Swiss-Prot),   Q8C437 (UniProtKB/Swiss-Prot),   F8SLP8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006535571   ⟸   XM_006535508
- Peptide Label: isoform X21
- UniProtKB: Q9JMB9 (UniProtKB/Swiss-Prot),   Q9DAA1 (UniProtKB/Swiss-Prot),   Q8CA31 (UniProtKB/Swiss-Prot),   Q8C437 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006535569   ⟸   XM_006535506
- Peptide Label: isoform X14
- UniProtKB: Q9JMB9 (UniProtKB/Swiss-Prot),   Q9DAA1 (UniProtKB/Swiss-Prot),   Q8CA31 (UniProtKB/Swiss-Prot),   Q8C437 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011248003   ⟸   XM_011249701
- Peptide Label: isoform X17
- UniProtKB: Q9JMB9 (UniProtKB/Swiss-Prot),   Q9DAA1 (UniProtKB/Swiss-Prot),   Q8CA31 (UniProtKB/Swiss-Prot),   Q8C437 (UniProtKB/Swiss-Prot),   F8SLP7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011247999   ⟸   XM_011249697
- Peptide Label: isoform X9
- UniProtKB: Q9JMB9 (UniProtKB/Swiss-Prot),   Q9DAA1 (UniProtKB/Swiss-Prot),   Q8CA31 (UniProtKB/Swiss-Prot),   Q8C437 (UniProtKB/Swiss-Prot),   F8SLP6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011247998   ⟸   XM_011249696
- Peptide Label: isoform X8
- UniProtKB: Q9JMB9 (UniProtKB/Swiss-Prot),   Q9DAA1 (UniProtKB/Swiss-Prot),   Q8CA31 (UniProtKB/Swiss-Prot),   Q8C437 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011247996   ⟸   XM_011249694
- Peptide Label: isoform X6
- UniProtKB: Q9JMB9 (UniProtKB/Swiss-Prot),   Q9DAA1 (UniProtKB/Swiss-Prot),   Q8CA31 (UniProtKB/Swiss-Prot),   Q8C437 (UniProtKB/Swiss-Prot),   F8SLP5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011247995   ⟸   XM_011249693
- Peptide Label: isoform X5
- UniProtKB: Q9JMB9 (UniProtKB/Swiss-Prot),   Q9DAA1 (UniProtKB/Swiss-Prot),   Q8CA31 (UniProtKB/Swiss-Prot),   Q8C437 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011247997   ⟸   XM_011249695
- Peptide Label: isoform X7
- UniProtKB: Q9JMB9 (UniProtKB/Swiss-Prot),   Q9DAA1 (UniProtKB/Swiss-Prot),   Q8CA31 (UniProtKB/Swiss-Prot),   Q8C437 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011247991   ⟸   XM_011249689
- Peptide Label: isoform X1
- UniProtKB: Q9JMB9 (UniProtKB/Swiss-Prot),   Q9DAA1 (UniProtKB/Swiss-Prot),   Q8CA31 (UniProtKB/Swiss-Prot),   Q8C437 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011247990   ⟸   XM_011249688
- Peptide Label: isoform X1
- UniProtKB: Q9JMB9 (UniProtKB/Swiss-Prot),   Q9DAA1 (UniProtKB/Swiss-Prot),   Q8CA31 (UniProtKB/Swiss-Prot),   Q8C437 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011247992   ⟸   XM_011249690
- Peptide Label: isoform X2
- UniProtKB: Q9JMB9 (UniProtKB/Swiss-Prot),   Q9DAA1 (UniProtKB/Swiss-Prot),   Q8CA31 (UniProtKB/Swiss-Prot),   Q8C437 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011247994   ⟸   XM_011249692
- Peptide Label: isoform X4
- UniProtKB: Q9JMB9 (UniProtKB/Swiss-Prot),   Q9DAA1 (UniProtKB/Swiss-Prot),   Q8CA31 (UniProtKB/Swiss-Prot),   Q8C437 (UniProtKB/Swiss-Prot),   F8SLQ1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011247993   ⟸   XM_011249691
- Peptide Label: isoform X3
- UniProtKB: Q9JMB9 (UniProtKB/Swiss-Prot),   Q9DAA1 (UniProtKB/Swiss-Prot),   Q8CA31 (UniProtKB/Swiss-Prot),   Q8C437 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011248002   ⟸   XM_011249700
- Peptide Label: isoform X13
- UniProtKB: Q9JMB9 (UniProtKB/Swiss-Prot),   Q9DAA1 (UniProtKB/Swiss-Prot),   Q8CA31 (UniProtKB/Swiss-Prot),   Q8C437 (UniProtKB/Swiss-Prot),   F8SLQ3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011248001   ⟸   XM_011249699
- Peptide Label: isoform X12
- UniProtKB: Q9JMB9 (UniProtKB/Swiss-Prot),   Q9DAA1 (UniProtKB/Swiss-Prot),   Q8CA31 (UniProtKB/Swiss-Prot),   Q8C437 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011248000   ⟸   XM_011249698
- Peptide Label: isoform X11
- UniProtKB: Q9JMB9 (UniProtKB/Swiss-Prot),   Q9DAA1 (UniProtKB/Swiss-Prot),   Q8CA31 (UniProtKB/Swiss-Prot),   Q8C437 (UniProtKB/Swiss-Prot),   F8SLQ4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011248004   ⟸   XM_011249702
- Peptide Label: isoform X18
- UniProtKB: Q9JMB9 (UniProtKB/Swiss-Prot),   Q9DAA1 (UniProtKB/Swiss-Prot),   Q8CA31 (UniProtKB/Swiss-Prot),   Q8C437 (UniProtKB/Swiss-Prot),   F8SLQ5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011248005   ⟸   XM_011249703
- Peptide Label: isoform X19
- UniProtKB: Q9JMB9 (UniProtKB/Swiss-Prot),   Q9DAA1 (UniProtKB/Swiss-Prot),   Q8CA31 (UniProtKB/Swiss-Prot),   Q8C437 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001276434   ⟸   NM_001289505
- Peptide Label: isoform 4
- UniProtKB: Q9JMB9 (UniProtKB/Swiss-Prot),   Q9DAA1 (UniProtKB/Swiss-Prot),   Q8CA31 (UniProtKB/Swiss-Prot),   Q8C437 (UniProtKB/Swiss-Prot),   D3YYH0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001297389   ⟸   NM_001310460
- Peptide Label: isoform 5
- UniProtKB: Q9JMB9 (UniProtKB/Swiss-Prot),   Q9DAA1 (UniProtKB/Swiss-Prot),   Q8CA31 (UniProtKB/Swiss-Prot),   Q8C437 (UniProtKB/Swiss-Prot),   F8SLQ1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030108600   ⟸   XM_030252740
- Peptide Label: isoform X10
- UniProtKB: Q9JMB9 (UniProtKB/Swiss-Prot),   Q9DAA1 (UniProtKB/Swiss-Prot),   Q8CA31 (UniProtKB/Swiss-Prot),   Q8C437 (UniProtKB/Swiss-Prot)
Ensembl Acc Id: ENSMUSP00000103856   ⟸   ENSMUST00000108221
Ensembl Acc Id: ENSMUSP00000103860   ⟸   ENSMUST00000108225
Ensembl Acc Id: ENSMUSP00000103859   ⟸   ENSMUST00000108224
Ensembl Acc Id: ENSMUSP00000103861   ⟸   ENSMUST00000108226
Ensembl Acc Id: ENSMUSP00000142196   ⟸   ENSMUST00000194016
Ensembl Acc Id: ENSMUSP00000142008   ⟸   ENSMUST00000193289
Ensembl Acc Id: ENSMUSP00000141454   ⟸   ENSMUST00000193681
Ensembl Acc Id: ENSMUSP00000141387   ⟸   ENSMUST00000192093
Ensembl Acc Id: ENSMUSP00000077353   ⟸   ENSMUST00000078226
RefSeq Acc Id: XP_036019093   ⟸   XM_036163200
- Peptide Label: isoform X16
- UniProtKB: Q9JMB9 (UniProtKB/Swiss-Prot),   Q9DAA1 (UniProtKB/Swiss-Prot),   Q8CA31 (UniProtKB/Swiss-Prot),   Q8C437 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_036019096   ⟸   XM_036163203
- Peptide Label: isoform X22
RefSeq Acc Id: XP_036019095   ⟸   XM_036163202
- Peptide Label: isoform X20
- UniProtKB: Q9JMB9 (UniProtKB/Swiss-Prot),   Q9DAA1 (UniProtKB/Swiss-Prot),   Q8CA31 (UniProtKB/Swiss-Prot),   Q8C437 (UniProtKB/Swiss-Prot)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8C437-F1-model_v2 AlphaFold Q8C437 1-567 view protein structure

Promoters
RGD ID:6834218
Promoter ID:MM_KWN:34017
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:OTTMUST00000057062
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36332,855,301 - 32,855,801 (-)MPROMDB
RGD ID:6834219
Promoter ID:MM_KWN:34021
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:ENSMUST00000108224,   NM_021483
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36332,981,711 - 32,982,211 (-)MPROMDB
RGD ID:6880460
Promoter ID:EPDNEW_M3680
Type:multiple initiation site
Name:Pex5l_3
Description:Mus musculus peroxisomal biogenesis factor 5-like , transcriptvariant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M3681  EPDNEW_M3682  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38332,985,079 - 32,985,139EPDNEW
RGD ID:6880462
Promoter ID:EPDNEW_M3681
Type:initiation region
Name:Pex5l_2
Description:Mus musculus peroxisomal biogenesis factor 5-like , transcriptvariant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M3680  EPDNEW_M3682  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38333,083,030 - 33,083,090EPDNEW
RGD ID:6880464
Promoter ID:EPDNEW_M3682
Type:initiation region
Name:Pex5l_1
Description:Mus musculus peroxisomal biogenesis factor 5-like , transcriptvariant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M3680  EPDNEW_M3681  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38333,143,254 - 33,143,314EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1916672 AgrOrtholog
Ensembl Genes ENSMUSG00000027674 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000078226.10 UniProtKB/TrEMBL
  ENSMUST00000108221 ENTREZGENE
  ENSMUST00000108221.2 UniProtKB/Swiss-Prot
  ENSMUST00000108224 ENTREZGENE
  ENSMUST00000108224.8 UniProtKB/TrEMBL
  ENSMUST00000108225.10 UniProtKB/TrEMBL
  ENSMUST00000108226 ENTREZGENE
  ENSMUST00000108226.8 UniProtKB/TrEMBL
  ENSMUST00000192093 ENTREZGENE
  ENSMUST00000192093.6 UniProtKB/TrEMBL
  ENSMUST00000193289 ENTREZGENE
  ENSMUST00000193289.6 UniProtKB/TrEMBL
  ENSMUST00000193681 ENTREZGENE
  ENSMUST00000193681.6 UniProtKB/TrEMBL
  ENSMUST00000194016.6 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro PTS1R_family UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TPR-like_helical_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TPR_repeat UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:58869 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1916672 ENTREZGENE
NCBI Gene Pex5l ENTREZGENE
PANTHER PTHR10130 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR10130:SF1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam TPR_16 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TPR_8 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Pex5l PhenoGen
PROSITE TPR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TPR_REGION UniProtKB/Swiss-Prot
SMART TPR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF48452 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt D3YYH0 ENTREZGENE, UniProtKB/TrEMBL
  F8SLP5 ENTREZGENE, UniProtKB/TrEMBL
  F8SLP6 ENTREZGENE, UniProtKB/TrEMBL
  F8SLP7 ENTREZGENE, UniProtKB/TrEMBL
  F8SLP8 ENTREZGENE, UniProtKB/TrEMBL
  F8SLP9 ENTREZGENE, UniProtKB/TrEMBL
  F8SLQ1 ENTREZGENE, UniProtKB/TrEMBL
  F8SLQ3 ENTREZGENE, UniProtKB/TrEMBL
  F8SLQ4 ENTREZGENE, UniProtKB/TrEMBL
  F8SLQ5 ENTREZGENE, UniProtKB/TrEMBL
  F8SLQ6 ENTREZGENE, UniProtKB/TrEMBL
  PEX5R_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q8CA31 ENTREZGENE
  Q9DAA1 ENTREZGENE
  Q9JMB9 ENTREZGENE
UniProt Secondary Q8CA31 UniProtKB/Swiss-Prot
  Q9DAA1 UniProtKB/Swiss-Prot
  Q9JMB9 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2024-08-21 Pex5l  peroxisomal biogenesis factor 5-like  1700016J08Rik  RIKEN cDNA 1700016J08 gene  Symbol and/or name change 5135510 APPROVED
2024-08-21 1700016J08Rik  RIKEN cDNA 1700016J08 gene  Pex5l  peroxisomal biogenesis factor 5-like  Symbol and/or name change 5135510 APPROVED