Agtr1b (angiotensin II receptor, type 1b) - Rat Genome Database

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Pathways
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Gene: Agtr1b (angiotensin II receptor, type 1b) Mus musculus
Analyze
Symbol: Agtr1b
Name: angiotensin II receptor, type 1b
RGD ID: 10123
MGI Page MGI
Description: Predicted to enable angiotensin receptor activity; bradykinin receptor binding activity; and protein heterodimerization activity. Involved in multicellular organism aging and regulation of blood pressure. Acts upstream of or within several processes, including blood vessel development; drinking behavior; and regulation of systemic arterial blood pressure by circulatory renin-angiotensin. Predicted to be located in plasma membrane. Is expressed in several structures, including adrenal gland; genitourinary system; heart; liver; and lung. Human ortholog(s) of this gene implicated in several diseases, including Alzheimer's disease; COVID-19; artery disease (multiple); chronic kidney disease; and sarcoidosis. Orthologous to human AGTR1 (angiotensin II receptor type 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: Agtr-; Agtr-1b; angiotensin II type-1 receptor B; angiotensin II type-1B receptor; Angtr; Angtr-1b; AT1; AT1 receptor B; AT1B; AT2R1B; AT3; MGC129325; type-1 angiotensin II receptor B; type-1B angiotensin II receptor
RGD Orthologs
Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39320,368,637 - 20,421,341 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl320,368,637 - 20,421,341 (-)EnsemblGRCm39 Ensembl
GRCm38320,314,473 - 20,367,177 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl320,314,473 - 20,367,177 (-)EnsemblGRCm38mm10GRCm38
MGSCv37320,213,395 - 20,266,099 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36320,505,546 - 20,558,250 (-)NCBIMGSCv36mm8
Celera320,303,573 - 20,356,081 (-)NCBICelera
Cytogenetic Map3A2NCBI
cM Map36.37NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
angiotensin-activated signaling pathway  (ISO)
blood vessel development  (IGI)
brain renin-angiotensin system  (IMP)
calcium-mediated signaling  (ISO)
cell chemotaxis  (ISO)
cellular response to dexamethasone stimulus  (ISO)
drinking behavior  (IGI,IMP)
G protein-coupled receptor signaling pathway  (IBA,ISO)
inflammatory response  (IBA,IGI)
kidney development  (IGI,ISO)
maintenance of blood vessel diameter homeostasis by renin-angiotensin  (ISO)
negative regulation of neuron apoptotic process  (IMP)
neuron apoptotic process  (IMP)
phospholipase C-activating angiotensin-activated signaling pathway  (ISO)
positive regulation of blood pressure  (ISO)
positive regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis  (ISO)
positive regulation of branching involved in ureteric bud morphogenesis  (ISO)
positive regulation of CoA-transferase activity  (ISO)
positive regulation of cytosolic calcium ion concentration  (IBA,ISO)
positive regulation of cytosolic calcium ion concentration involved in phospholipase C-activating G protein-coupled signaling pathway  (ISO)
positive regulation of macrophage derived foam cell differentiation  (ISO)
positive regulation of phospholipase A2 activity  (ISO)
positive regulation of protein metabolic process  (ISO)
regulation of blood pressure  (IMP)
regulation of systemic arterial blood pressure by circulatory renin-angiotensin  (IGI)
regulation of vasoconstriction  (ISO)
response to angiotensin  (ISO)
response to estrogen  (ISO)
response to hypoxia  (ISO)
response to immobilization stress  (ISO)
response to nicotine  (ISO)
response to nutrient  (ISO)
response to salt stress  (ISO)
response to xenobiotic stimulus  (ISO)
Rho protein signal transduction  (ISO)
signal transduction  (IEA)
viral entry into host cell  (ISO)

Cellular Component

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. International union of pharmacology. XXIII. The angiotensin II receptors. de Gasparo M, etal., Pharmacol Rev. 2000 Sep;52(3):415-72.
2. Angiotensin II type 1 receptor A1166C gene polymorphism. Absence of an association with the risk of coronary artery disease and myocardial infarction and of a synergistic effect with angiotensin-converting enzyme gene polymorphism on the risk of these diseases. Gardemann A, etal., Eur Heart J. 1998 Nov;19(11):1657-65.
3. Mutations in genes in the renin-angiotensin system are associated with autosomal recessive renal tubular dysgenesis. Gribouval O, etal., Nat Genet. 2005 Sep;37(9):964-8. Epub 2005 Aug 14.
4. Pleiotropic AT1 receptor signaling pathways mediating physiological and pathogenic actions of angiotensin II. Hunyady L and Catt KJ, Mol Endocrinol. 2006 May;20(5):953-70. Epub 2005 Sep 1.
5. A gammaGT-AT1A receptor transgene protects renal cortical structure in AT1 receptor-deficient mice. Le TH, etal., Physiol Genomics. 2004 Aug 11;18(3):290-8.
6. [Dynamic changes of angiotensin II type-1 receptor mRNA expression in volume-overloaded ventricular hypertrophy]. Li YQ, etal., Sheng Li Xue Bao. 1998 Jun;50(3):303-8.
7. Prophylactic angiotensin type 1 receptor antagonism confers neuroprotection in an aged rat model of postoperative cognitive dysfunction. Li Z, etal., Biochem Biophys Res Commun. 2014 Jun 20;449(1):74-80. doi: 10.1016/j.bbrc.2014.04.153. Epub 2014 May 9.
8. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
9. MGDs mouse GO annotations MGD data from the GO Consortium
10. MGD IEA MGD IEA
11. TM2-TM7 interaction in coupling movement of transmembrane helices to activation of the angiotensin II type-1 receptor. Miura S, etal., J Biol Chem 2003 Feb 7;278(6):3720-5.
12. Increased gene expression of components of the renin-angiotensin system in glomeruli of genetically hypertensive rats. Obata J, etal., J Hypertens. 2000 Sep;18(9):1247-55.
13. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
14. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
15. Overexpression of angiotensin II type I receptor in cardiomyocytes induces cardiac hypertrophy and remodeling. Paradis P, etal., Proc Natl Acad Sci U S A 2000 Jan 18;97(2):931-6.
16. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
17. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
18. Angiotensin III: a central regulator of vasopressin release and blood pressure. Reaux A, etal., Trends Endocrinol Metab. 2001 May-Jun;12(4):157-62.
19. Mouse MP Annotation Import Pipeline RGD automated import pipeline
20. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
21. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
22. AT-1 receptor and phospholipase C are involved in angiotensin III modulation of hypothalamic noradrenergic transmission. Rodriguez-Campos M, etal., Cell Mol Neurobiol. 2000 Dec;20(6):747-62.
23. Murine double nullizygotes of the angiotensin type 1A and 1B receptor genes duplicate severe abnormal phenotypes of angiotensinogen nullizygotes. Tsuchida S, etal., J Clin Invest 1998 Feb 15;101(4):755-60.
24. Positive feedback regulation of angiotensin II-AT1B receptor gene expression in rat adrenal glands. Wagner C and Kurtz A, Pflugers Arch. 1998 Aug;436(3):323-8.
25. Epistatic interaction between variations in the angiotensin I converting enzyme and angiotensin II type 1 receptor genes in relation to extent of coronary atherosclerosis. Ye S, etal., Heart. 2003 Oct;89(10):1195-9.
Additional References at PubMed
PMID:1497638   PMID:1599461   PMID:8074205   PMID:9087671   PMID:9096120   PMID:9310306   PMID:9316207   PMID:9457685   PMID:9576131   PMID:9788961   PMID:9860997   PMID:9973259  
PMID:10076178   PMID:10194467   PMID:10222259   PMID:10231430   PMID:10349636   PMID:10405217   PMID:10432390   PMID:10775573   PMID:10880053   PMID:11042159   PMID:11076861   PMID:11111018  
PMID:11217851   PMID:11353388   PMID:12429556   PMID:12477932   PMID:12591117   PMID:12680593   PMID:12691672   PMID:12909574   PMID:14563714   PMID:14983036   PMID:15016612   PMID:15123520  
PMID:15808846   PMID:15944203   PMID:16141072   PMID:16141073   PMID:16332932   PMID:16495379   PMID:16888236   PMID:17409281   PMID:17429342   PMID:17673207   PMID:18180383   PMID:18497303  
PMID:19404405   PMID:19710239   PMID:19834109   PMID:20056745   PMID:20071356   PMID:20413721   PMID:20843830   PMID:21267068   PMID:21367915   PMID:21677750   PMID:21873635   PMID:22286690  
PMID:22526820   PMID:23119030   PMID:23204186   PMID:24014678   PMID:24154952   PMID:24529758   PMID:25395620   PMID:25855778   PMID:26107632   PMID:26531127   PMID:26773730   PMID:27413199  
PMID:27643439   PMID:27911784   PMID:27955986   PMID:28665931   PMID:29412691   PMID:29661841   PMID:29879378   PMID:30969804   PMID:31886721   PMID:33781840   PMID:34069164   PMID:34905510  


Genomics

Comparative Map Data
Agtr1b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39320,368,637 - 20,421,341 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl320,368,637 - 20,421,341 (-)EnsemblGRCm39 Ensembl
GRCm38320,314,473 - 20,367,177 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl320,314,473 - 20,367,177 (-)EnsemblGRCm38mm10GRCm38
MGSCv37320,213,395 - 20,266,099 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36320,505,546 - 20,558,250 (-)NCBIMGSCv36mm8
Celera320,303,573 - 20,356,081 (-)NCBICelera
Cytogenetic Map3A2NCBI
cM Map36.37NCBI
Agtr1b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.22102,844,969 - 102,920,232 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2102,844,969 - 102,920,232 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2109,389,316 - 109,463,548 (-)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.02107,510,501 - 107,584,761 (-)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.02102,444,366 - 102,513,153 (-)NCBIRnor_WKY
Rnor_6.02105,149,020 - 105,224,335 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2105,149,020 - 105,224,295 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02124,879,262 - 124,954,378 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42105,503,269 - 105,602,591 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12105,448,230 - 105,547,520 (-)NCBI
Celera298,214,526 - 98,286,355 (-)NCBICelera
Cytogenetic Map2q24NCBI

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:366
Count of miRNA genes:225
Interacting mature miRNAs:236
Transcripts:ENSMUST00000068316, ENSMUST00000163776
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301256Skmw1_mskeletal muscle weight 1 (mouse)Not determined3125786432Mouse
26884436Zlq3_mzygomatic length QTL 3, 10 week (mouse)33265060142405761Mouse
1300559Thypr3_mthymocyte proliferative response 3 (mouse)Not determined3452541938525519Mouse
12798540Scvg2_msubcutaneous vessel growth QTL 2 (mouse)3744981526249645Mouse
1558925Hivan1_mHIV-associated nephropathy 1 (mouse)Not determined3758617468716946Mouse
4142399Aec1_mautoimmune exocrinopathy 1 (mouse)Not determined7586174102690034Mouse
4141116Lgaq4_mlate growth adjusted QTL 4 (mouse)Not determined1024922183184946Mouse
4141255W10q3_mweight 10 weeks QTL 3 (mouse)Not determined1024922183184946Mouse
4141563Lgq3_mlate growth QTL 3 (mouse)Not determined1024922183184946Mouse
39128206Lwq18_mliver weight QTL 18 (mouse)31024922183184946Mouse
1357584Splq6_mspleen weight QTL 6 (mouse)Not determined31024922183184946Mouse
1357440Hrtpq1_mheart weight percentage QTL 1 (mouse)Not determined31024922183184946Mouse
1301358Eae20_mexperimental allergic encephalomyelitis 20 (mouse)Not determined31163045345630591Mouse
12738410Lfibq2_mliver fibrosis QTL 2 (mouse)31206506020755242Mouse
26884427Cvht4_mcranial vault height 4, 10 week (mouse)316054164109707316Mouse
13207570Tcq12_mtotal cholesterol QTL 12 (mouse)316504164130163649Mouse
4142092Tgq13_mtriglyceride QTL 13 (mouse)Not determined1828816852288168Mouse
25671383Hrsq1_mhost response to SARS QTL 1, vascular cuffing (mouse)31844095426823641Mouse
1301114Ssial2_msusceptibility to sialadenitis 2 (mouse)Not determined32017486254180103Mouse

Markers in Region
Agtr1a  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381330,381,326 - 30,381,395UniSTSGRCm38
GRCm38320,315,999 - 20,316,068UniSTSGRCm38
MGSCv37320,214,921 - 20,214,990UniSTSGRCm37
MGSCv371330,473,195 - 30,473,264UniSTSGRCm37
Celera1330,595,740 - 30,595,809UniSTS
Celera320,305,099 - 20,305,168UniSTS
Cytogenetic Map13A3.2UniSTS
Cytogenetic Map3A2UniSTS
cM Map1316.0UniSTS
cM Map1316.0UniSTS
cM Map37.6UniSTS
Agtr1b  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381743,900,483 - 43,901,549UniSTSGRCm38
GRCm38320,315,644 - 20,316,334UniSTSGRCm38
MGSCv37320,214,566 - 20,215,256UniSTSGRCm37
MGSCv371744,037,432 - 44,038,498UniSTSGRCm37
Celera320,304,744 - 20,305,434UniSTS
Celera1747,325,512 - 47,326,578UniSTS
Cytogenetic Map3A2UniSTS
Cytogenetic Map17CUniSTS
cM Map37.6UniSTS
PMC28071P1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38320,315,447 - 20,316,181UniSTSGRCm38
MGSCv37320,214,369 - 20,215,103UniSTSGRCm37
Celera320,304,547 - 20,305,281UniSTS
Cytogenetic Map3A2UniSTS
cM Map37.6UniSTS
Agtr1a  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38320,315,694 - 20,316,334UniSTSGRCm38
GRCm381330,381,060 - 30,381,700UniSTSGRCm38
MGSCv371330,472,929 - 30,473,569UniSTSGRCm37
MGSCv37320,214,616 - 20,215,256UniSTSGRCm37
Celera1330,595,474 - 30,596,114UniSTS
Celera320,304,794 - 20,305,434UniSTS
Cytogenetic Map3A2UniSTS
Cytogenetic Map13A3.2UniSTS


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000068316   ⟹   ENSMUSP00000068298
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl320,368,637 - 20,421,341 (-)Ensembl
GRCm38.p6 Ensembl320,314,473 - 20,367,177 (-)Ensembl
RefSeq Acc Id: ENSMUST00000163776   ⟹   ENSMUSP00000128724
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl320,369,061 - 20,421,288 (-)Ensembl
GRCm38.p6 Ensembl320,314,897 - 20,367,124 (-)Ensembl
RefSeq Acc Id: NM_175086   ⟹   NP_780295
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39320,368,637 - 20,421,341 (-)NCBI
GRCm38320,314,473 - 20,367,177 (-)ENTREZGENE
MGSCv37320,213,395 - 20,266,099 (-)RGD
Celera320,303,573 - 20,356,081 (-)RGD
cM Map3 ENTREZGENE
Sequence:
Protein Sequences
Protein RefSeqs NP_780295 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAB22270 (Get FASTA)   NCBI Sequence Viewer  
  AAI09154 (Get FASTA)   NCBI Sequence Viewer  
  BAC39824 (Get FASTA)   NCBI Sequence Viewer  
  EDL34899 (Get FASTA)   NCBI Sequence Viewer  
  P29755 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_780295   ⟸   NM_175086
- UniProtKB: P29755 (UniProtKB/Swiss-Prot),   Q32MF7 (UniProtKB/TrEMBL),   Q8BU69 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000128724   ⟸   ENSMUST00000163776
RefSeq Acc Id: ENSMUSP00000068298   ⟸   ENSMUST00000068316
Protein Domains
G-protein coupled receptors family 1 profile

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AT1b I-TASSER model P29755 1-359 view protein structure
AF-P29755-F1-model_v2 AlphaFold P29755 1-359 view protein structure

Promoters
RGD ID:6880332
Promoter ID:EPDNEW_M3617
Type:multiple initiation site
Name:Agtr1b_1
Description:Mus musculus angiotensin II receptor, type 1b , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38320,367,177 - 20,367,237EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:87965 AgrOrtholog
Ensembl Genes ENSMUSG00000054988 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Protein ENSMUSP00000068298 ENTREZGENE
  ENSMUSP00000068298.8 UniProtKB/Swiss-Prot
  ENSMUSP00000128724.3 UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000068316 ENTREZGENE
  ENSMUST00000068316.8 UniProtKB/Swiss-Prot
  ENSMUST00000163776.3 UniProtKB/Swiss-Prot
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro ATII_AT1_rcpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ATII_rcpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_Rhodpsn UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:11608 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:87965 ENTREZGENE
NCBI Gene 11608 ENTREZGENE
PANTHER C-C CHEMOKINE RECEPTOR TYPE 4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CELL ADHESION MOLECULE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam 7tm_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Agtr1b PhenoGen
PRINTS ANGIOTENSINR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ANGIOTENSN1R UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCRRHODOPSN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART 7TM_GPCR_Srsx UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt AGTRB_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q32MF7 ENTREZGENE, UniProtKB/TrEMBL
  Q8BU69 ENTREZGENE, UniProtKB/TrEMBL