Gene: Gm38509 (predicted gene, 38509) Mus musculus |
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Analyze |
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Symbol: |
Gm38509 |
Name: |
predicted gene, 38509 |
RGD ID: |
10024817 |
MGI Page |
MGI |
Description: |
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Type: |
ncrna (Ensembl: lncRNA)
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RefSeq Status: |
VALIDATED |
Previously known as: |
Peril |
Latest Assembly: |
GRCm39 - Mouse Genome Assembly GRCm39 |
Position: |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 3 | 34,826,224 - 34,836,495 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 3 | 34,826,089 - 34,836,495 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 3 | 34,772,075 - 34,782,346 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 3 | 34,772,075 - 34,782,346 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | Celera | 3 | 34,673,776 - 34,684,041 (+) | NCBI | | Celera | | | Cytogenetic Map | 3 | A3 | NCBI | | | | |
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JBrowse: |
View Region in Genome Browser (JBrowse)
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Model |
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References
Additional References at PubMed
Genomics
QTLs in Region (GRCm39)
4142399 | Aec1_m | autoimmune exocrinopathy 1 (mouse) | | | Not determined | | | 7586174 | 102690034 | Mouse | 15039332 | Nmrs6_m | NAFLD-associated magnetic resonance shift 6 (mouse) | | | | | 3 | 34170741 | 68170741 | Mouse | 4141116 | Lgaq4_m | late growth adjusted QTL 4 (mouse) | | | Not determined | | | 10249221 | 83184946 | Mouse | 4141563 | Lgq3_m | late growth QTL 3 (mouse) | | | Not determined | | | 10249221 | 83184946 | Mouse | 1357584 | Splq6_m | spleen weight QTL 6 (mouse) | | | Not determined | | 3 | 10249221 | 83184946 | Mouse | 15039336 | Nmrs2_m | NAFLD-associated magnetic resonance shift 2 (mouse) | | | | | 3 | 34576103 | 68576103 | Mouse | 26884436 | Zlq3_m | zygomatic length QTL 3, 10 week (mouse) | | | | | 3 | 3265060 | 142405761 | Mouse | 26884427 | Cvht4_m | cranial vault height 4, 10 week (mouse) | | | | | 3 | 16054164 | 109707316 | Mouse | 1357440 | Hrtpq1_m | heart weight percentage QTL 1 (mouse) | | | Not determined | | 3 | 10249221 | 83184946 | Mouse | 1558925 | Hivan1_m | HIV-associated nephropathy 1 (mouse) | | | Not determined | | 3 | 7586174 | 68716946 | Mouse | 9587784 | Afw13_m | abdominal fat weight QTL 13 (mouse) | | | Not determined | | 3 | 33752045 | 67752228 | Mouse | 39128206 | Lwq18_m | liver weight QTL 18 (mouse) | | | | | 3 | 10249221 | 83184946 | Mouse | 13207570 | Tcq12_m | total cholesterol QTL 12 (mouse) | | | | | 3 | 16504164 | 130163649 | Mouse | 1300559 | Thypr3_m | thymocyte proliferative response 3 (mouse) | | | Not determined | | 3 | 4525419 | 38525519 | Mouse | 26884422 | Cvht7_m | cranial vault height 7, 16 week (mouse) | | | | | 3 | 28954149 | 118893649 | Mouse | 1301114 | Ssial2_m | susceptibility to sialadenitis 2 (mouse) | | | Not determined | | 3 | 20174862 | 54180103 | Mouse | 1357689 | Mdmsc1_m | modifier of muscularity 1 (mouse) | | | Not determined | | 3 | 33327201 | 45916479 | Mouse | 1300961 | Bh4p_m | bar holding four paws (mouse) | | | Not determined | | 3 | 31837854 | 65837997 | Mouse | 4142092 | Tgq13_m | triglyceride QTL 13 (mouse) | | | Not determined | | | 18288168 | 52288168 | Mouse | 10043882 | Bwtq13_m | body weight QTL 13 (mouse) | | | Not determined | | 3 | 33752045 | 67752228 | Mouse | 10412073 | Ssen2_m | suseptibility to Sendai virus 2 (mouse) | | | Not determined | | 3 | 33535465 | 67535615 | Mouse | 4141255 | W10q3_m | weight 10 weeks QTL 3 (mouse) | | | Not determined | | | 10249221 | 83184946 | Mouse | 12910781 | Pwgrq12_m | post-weaning growth rate QTL 12 (mouse) | | | | | 3 | 32635760 | 58017363 | Mouse | 1302056 | Orgwq4_m | organ weight QTL 4 (mouse) | | | Not determined | | 3 | 30067588 | 147304689 | Mouse | 1301358 | Eae20_m | experimental allergic encephalomyelitis 20 (mouse) | | | Not determined | | 3 | 11630453 | 45630591 | Mouse | 12910778 | Pwgrq13_m | post-weaning growth rate QTL 13 (mouse) | | | | | 3 | 32635760 | 58017363 | Mouse | |
Expression
RNA-SEQ Expression
Sequence
Ensembl Acc Id: |
ENSMUST00000197492 |
Type: |
CODING |
Position: |
Mouse Assembly | Chr | Position (strand) | Source |
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GRCm39 Ensembl | 3 | 34,826,089 - 34,836,495 (+) | Ensembl | GRCm38.p6 Ensembl | 3 | 34,772,075 - 34,782,346 (+) | Ensembl |
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RefSeq Acc Id: |
NR_110488 |
RefSeq Status: |
VALIDATED |
Type: |
NON-CODING |
Position: |
Mouse Assembly | Chr | Position (strand) | Source |
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GRCm39 | 3 | 34,826,224 - 34,836,495 (+) | NCBI | GRCm38 | 3 | 34,772,075 - 34,782,346 (+) | NCBI | Celera | 3 | 34,673,776 - 34,684,041 (+) | NCBI |
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Sequence: |
AGAAGTTCAGTGTGGAACCAGATTTCATCACCTGGAAACGGTGAAAGCTAATTGTTTCACTACC AAGTGTTACCTTCTACAATGGATTACTATGCAGCTGTAAATAAGAACAGAGGCCATGTGTACGA CCCATGTACTGCAGTTCCTGTGGAGGCCAGAAGAGGACCTCAGAGGCAGGCAGATCTCCAGGAT CCAGGCCAGCCAGAGCTGCTATAAGGTGGCTGCAAATCTAATCAAGTCGACAGTGAGGAAGAAG CACTACCCACCACCGTGAATACCTGTCAGCCAGTGGGTCACAGGTGTGAGTCACTGAGCAGGAA AAGGATGCTTGTGAAGCCGTGCAAAGATGGGGCTGGAACGGTGGATTGCTGGTTAAGAGCACTG GTGTTCTTGCAGAGGCCCTGAGCATTTCCAGTGTCTACATCACGTGACTCCCAGCTGCCTGGAC CTCCAGATCTAGAGGACCAGAACAAGAGGACCAGAACAAGACTGGCTCTAATATTGAATTGAAT TTAGAAGATTACCCCTCATATTGTAAAACCAAGTAGTCAGACACAAGTAACAAAAGATACCTGT GGTTTTATGTTCATTTTGAGACGGGTTCCCAAGTAGTCCAGACTGGCCTTGAACTCACTGTGTG GCTGAGAATGGCTTTGAATTTCTTGTTTTCCTGCCTCTTTCTCCCAAGTGCTGCGATCACAGAC ATGTAGCGGCACACCCCGTTTATGGAGAGCTGGAGATTAGATCCAGGGCCTTGTGTATGCTAGG TAAGCACTCTACCAAGTGAGTCACGTCCCCAGCCCAAGACATCTGGTTTGAACCAGATCTTTTC ATTAGGTTAAGCAGGAAGGCAGCTTGCAACACATGCATGGGAAGTGTGCCATCTTGGTTTAATG AGTGGGTTTCTGCGGATTGTTGAAACACTTCAACTTCCTTAACCCAGTATCTGATGAAGGAGCA AGGATAGAGAAATTAATTTACCACACACTAATTAAAGGGGGGTGCGCACTGTATACACAGTGAA AGTCTCTGGAATAAATATTTGATAAACAGTATCTGGCAAATTAAAAACCCGAAATGTTAAATTA AATGCAAATTAAAAATCTGGAATGTTAAATTAATTAAATACAGAAAATTGCATCAAACAGCAAA AAAAAAAAAAAAAAAAAAAA
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Additional Information
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