Abhd18 (abhydrolase domain containing 18) - Rat Genome Database

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Gene: Abhd18 (abhydrolase domain containing 18) Mus musculus
Analyze
Symbol: Abhd18
Name: abhydrolase domain containing 18
RGD ID: 1621250
MGI Page MGI
Description: Predicted to be located in extracellular region. Is expressed in dorsal root ganglion. Orthologous to human ABHD18 (abhydrolase domain containing 18).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 2310068E01Rik; 3110057O12Rik; 4732404H23; abhydrolase domain-containing protein 18; AI645591; alpha/beta hydrolase domain-containing protein 18; hypothetical protein LOC269423; uncharacterized protein C4orf29 homolog
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: Gm2011  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39340,825,532 - 40,892,573 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl340,801,405 - 40,892,573 (+)EnsemblGRCm39 Ensembl
GRCm38340,871,095 - 40,938,138 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl340,846,970 - 40,938,138 (+)EnsemblGRCm38mm10GRCm38
MGSCv37340,698,199 - 40,740,229 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36340,990,826 - 41,034,685 (+)NCBIMGSCv36mm8
Celera340,623,547 - 40,665,477 (+)NCBICelera
Cytogenetic Map3BNCBI
cM Map319.58NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:16141072   PMID:16141073   PMID:21267068  


Genomics

Comparative Map Data
Abhd18
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39340,825,532 - 40,892,573 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl340,801,405 - 40,892,573 (+)EnsemblGRCm39 Ensembl
GRCm38340,871,095 - 40,938,138 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl340,846,970 - 40,938,138 (+)EnsemblGRCm38mm10GRCm38
MGSCv37340,698,199 - 40,740,229 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36340,990,826 - 41,034,685 (+)NCBIMGSCv36mm8
Celera340,623,547 - 40,665,477 (+)NCBICelera
Cytogenetic Map3BNCBI
cM Map319.58NCBI
ABHD18
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh384127,965,406 - 128,039,953 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl4127,965,315 - 128,039,953 (+)EnsemblGRCh38hg38GRCh38
GRCh374128,886,561 - 128,961,108 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 364129,105,911 - 129,171,918 (+)NCBINCBI36Build 36hg18NCBI36
Celera4126,267,834 - 126,333,840 (+)NCBICelera
Cytogenetic Map4q28.2NCBI
HuRef4124,618,536 - 124,684,263 (+)NCBIHuRef
CHM1_14128,862,913 - 128,928,926 (+)NCBICHM1_1
T2T-CHM13v2.04131,269,448 - 131,343,978 (+)NCBIT2T-CHM13v2.0
Abhd18
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82125,800,488 - 125,850,167 (+)NCBIGRCr8
mRatBN7.22123,872,299 - 123,920,987 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2123,872,386 - 123,920,231 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2130,443,003 - 130,490,691 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02128,555,431 - 128,603,121 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02123,184,579 - 123,232,269 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02127,770,588 - 127,828,218 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2127,770,676 - 127,827,800 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02147,374,140 - 147,429,666 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42127,822,812 - 127,874,232 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera2118,780,951 - 118,828,543 (+)NCBICelera
Cytogenetic Map2q26NCBI
Abhd18
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542813,459,147 - 13,519,210 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542813,461,446 - 13,519,184 (-)NCBIChiLan1.0ChiLan1.0
ABHD18
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v23125,736,050 - 125,810,331 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan14126,002,291 - 126,076,566 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v04120,136,126 - 120,207,449 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.14131,439,603 - 131,509,386 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl4131,439,603 - 131,509,380 (+)Ensemblpanpan1.1panPan2
ABHD18
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11912,935,971 - 12,982,227 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1912,938,051 - 12,982,259 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1913,124,739 - 13,170,993 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01913,025,915 - 13,072,205 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1913,025,918 - 13,072,184 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11912,998,701 - 13,044,955 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01913,284,596 - 13,330,573 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01913,746,658 - 13,792,910 (-)NCBIUU_Cfam_GSD_1.0
Abhd18
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530161,465,307 - 61,509,174 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366422,761,961 - 2,802,028 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366422,762,674 - 2,801,831 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ABHD18
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl896,887,464 - 96,924,927 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1896,887,464 - 96,924,862 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.28103,755,770 - 103,791,881 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ABHD18
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1775,097,259 - 75,163,277 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366603754,235,445 - 54,302,391 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Abhd18
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247778,876,953 - 8,923,790 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247778,877,955 - 8,922,918 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:3825
Count of miRNA genes:706
Interacting mature miRNAs:900
Transcripts:ENSMUST00000060415, ENSMUST00000108077, ENSMUST00000108078, ENSMUST00000159057, ENSMUST00000159227, ENSMUST00000159274, ENSMUST00000159421, ENSMUST00000159774, ENSMUST00000161111
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142399Aec1_mautoimmune exocrinopathy 1 (mouse)Not determined7586174102690034Mouse
14746977Manh53_mmandible shape 53 (mouse)33592528069925280Mouse
15039332Nmrs6_mNAFLD-associated magnetic resonance shift 6 (mouse)33417074168170741Mouse
1301585Cd4ts1_mCD4 T cell subset 1 (mouse)Not determined33970410273704231Mouse
4141116Lgaq4_mlate growth adjusted QTL 4 (mouse)Not determined1024922183184946Mouse
4141563Lgq3_mlate growth QTL 3 (mouse)Not determined1024922183184946Mouse
1357584Splq6_mspleen weight QTL 6 (mouse)Not determined31024922183184946Mouse
11041901Lmr11b_mleishmaniasis resistance 11b (mouse)33970410273704231Mouse
15039336Nmrs2_mNAFLD-associated magnetic resonance shift 2 (mouse)33457610368576103Mouse
26884436Zlq3_mzygomatic length QTL 3, 10 week (mouse)33265060142405761Mouse
26884427Cvht4_mcranial vault height 4, 10 week (mouse)316054164109707316Mouse
1357440Hrtpq1_mheart weight percentage QTL 1 (mouse)Not determined31024922183184946Mouse
10755516Amzn1_manatomical modifier of Zfp423 1 (mouse)33970410273704231Mouse
1558925Hivan1_mHIV-associated nephropathy 1 (mouse)Not determined3758617468716946Mouse
9587784Afw13_mabdominal fat weight QTL 13 (mouse)Not determined33375204567752228Mouse
1301705Sles3_msystemic lupus erythmatosus suppressor 3 (mouse)Not determined337174862143353183Mouse
39128206Lwq18_mliver weight QTL 18 (mouse)31024922183184946Mouse
13207570Tcq12_mtotal cholesterol QTL 12 (mouse)316504164130163649Mouse
26884422Cvht7_mcranial vault height 7, 16 week (mouse)328954149118893649Mouse
1301114Ssial2_msusceptibility to sialadenitis 2 (mouse)Not determined32017486254180103Mouse
1357689Mdmsc1_mmodifier of muscularity 1 (mouse)Not determined33332720145916479Mouse
18337272Bmd46_mbone mineral density 46, males (mouse)33540742169407421Mouse
11039513Ltpr3a_mLeishmania tropica response 3a (mouse)33970410273704231Mouse
1300961Bh4p_mbar holding four paws (mouse)Not determined33183785465837997Mouse
4142092Tgq13_mtriglyceride QTL 13 (mouse)Not determined1828816852288168Mouse
10043882Bwtq13_mbody weight QTL 13 (mouse)Not determined33375204567752228Mouse
10412073Ssen2_msuseptibility to Sendai virus 2 (mouse)Not determined33353546567535615Mouse
4141255W10q3_mweight 10 weeks QTL 3 (mouse)Not determined1024922183184946Mouse
12910781Pwgrq12_mpost-weaning growth rate QTL 12 (mouse)33263576058017363Mouse
1300587Aod2_mautoimmune ovarian dysgenesis 2 (mouse)Not determined33717974268716946Mouse
1302056Orgwq4_morgan weight QTL 4 (mouse)Not determined330067588147304689Mouse
1301358Eae20_mexperimental allergic encephalomyelitis 20 (mouse)Not determined31163045345630591Mouse
12910778Pwgrq13_mpost-weaning growth rate QTL 13 (mouse)33263576058017363Mouse

Markers in Region
AI645591  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38340,935,441 - 40,935,521UniSTSGRCm38
MGSCv37340,739,363 - 40,739,443UniSTSGRCm37
Celera340,664,611 - 40,664,691UniSTS
Cytogenetic Map3CUniSTS
D3Mit226  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38340,937,660 - 40,937,793UniSTSGRCm38
MGSCv37340,741,582 - 40,741,715UniSTSGRCm37
Celera340,666,830 - 40,666,963UniSTS
Cytogenetic Map3CUniSTS
cM Map322.0UniSTS
Whitehead Genetic316.4UniSTS
Whitehead_YAC3 UniSTS
UniSTS:224885  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38340,850,535 - 40,850,728UniSTSGRCm38
GRCm38340,897,841 - 40,898,034UniSTSGRCm38
MGSCv37340,654,457 - 40,654,650UniSTSGRCm37
MGSCv37340,701,763 - 40,701,956UniSTSGRCm37
Celera340,627,111 - 40,627,304UniSTS
Celera340,580,090 - 40,580,283UniSTS
Cytogenetic Map3BUniSTS
Cytogenetic Map3CUniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001377110 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001377111 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001377112 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_026622 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_165084 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006500779 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017319591 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017319592 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030252629 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036163124 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001783694 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC160757 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK010105 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK014120 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK019438 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK028580 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK031032 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK163334 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK169375 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC011312 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC051081 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC092533 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC145212 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466530 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000108077   ⟹   ENSMUSP00000103712
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl340,848,757 - 40,891,572 (+)Ensembl
GRCm38.p6 Ensembl340,894,322 - 40,937,137 (+)Ensembl
Ensembl Acc Id: ENSMUST00000108078   ⟹   ENSMUSP00000103713
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl340,801,405 - 40,890,742 (+)Ensembl
GRCm38.p6 Ensembl340,846,970 - 40,936,307 (+)Ensembl
Ensembl Acc Id: ENSMUST00000159774   ⟹   ENSMUSP00000124430
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl340,848,580 - 40,892,573 (+)Ensembl
GRCm38.p6 Ensembl340,894,145 - 40,938,138 (+)Ensembl
Ensembl Acc Id: ENSMUST00000203214   ⟹   ENSMUSP00000144946
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl340,848,724 - 40,871,502 (+)Ensembl
GRCm38.p6 Ensembl340,894,289 - 40,917,067 (+)Ensembl
Ensembl Acc Id: ENSMUST00000203472   ⟹   ENSMUSP00000145313
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl340,848,698 - 40,871,533 (+)Ensembl
GRCm38.p6 Ensembl340,894,263 - 40,917,098 (+)Ensembl
Ensembl Acc Id: ENSMUST00000203650   ⟹   ENSMUSP00000145006
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl340,848,741 - 40,878,213 (+)Ensembl
GRCm38.p6 Ensembl340,894,306 - 40,923,778 (+)Ensembl
Ensembl Acc Id: ENSMUST00000203892   ⟹   ENSMUSP00000145150
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl340,848,780 - 40,871,855 (+)Ensembl
GRCm38.p6 Ensembl340,894,345 - 40,917,420 (+)Ensembl
Ensembl Acc Id: ENSMUST00000204464
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl340,884,980 - 40,891,130 (+)Ensembl
GRCm38.p6 Ensembl340,930,545 - 40,936,695 (+)Ensembl
Ensembl Acc Id: ENSMUST00000204496   ⟹   ENSMUSP00000145007
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl340,848,712 - 40,892,571 (+)Ensembl
GRCm38.p6 Ensembl340,894,277 - 40,938,136 (+)Ensembl
Ensembl Acc Id: ENSMUST00000204797
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl340,867,119 - 40,873,483 (+)Ensembl
GRCm38.p6 Ensembl340,912,684 - 40,919,048 (+)Ensembl
Ensembl Acc Id: ENSMUST00000205065   ⟹   ENSMUSP00000145095
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl340,848,759 - 40,891,589 (+)Ensembl
GRCm38.p6 Ensembl340,894,324 - 40,937,154 (+)Ensembl
RefSeq Acc Id: NM_001377110   ⟹   NP_001364039
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39340,848,694 - 40,892,573 (+)NCBI
GRCm38340,894,259 - 40,938,138 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001377111   ⟹   NP_001364040
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39340,848,694 - 40,892,573 (+)NCBI
GRCm38340,894,259 - 40,938,138 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001377112   ⟹   NP_001364041
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39340,848,694 - 40,892,573 (+)NCBI
GRCm38340,894,259 - 40,938,138 (+)NCBI
Sequence:
RefSeq Acc Id: NM_026622   ⟹   NP_080898
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39340,848,694 - 40,892,573 (+)NCBI
GRCm38340,894,259 - 40,938,138 (+)NCBI
MGSCv37340,698,199 - 40,740,229 (+)RGD
Celera340,623,547 - 40,665,477 (+)RGD
cM Map3 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_165084
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39340,848,694 - 40,892,573 (+)NCBI
GRCm38340,894,259 - 40,938,138 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006500779   ⟹   XP_006500842
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39340,848,797 - 40,892,171 (+)NCBI
GRCm38340,894,362 - 40,937,736 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017319591   ⟹   XP_017175080
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39340,825,532 - 40,892,171 (+)NCBI
GRCm38340,871,097 - 40,937,736 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017319592   ⟹   XP_017175081
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39340,848,668 - 40,892,171 (+)NCBI
GRCm38340,894,356 - 40,937,730 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030252629   ⟹   XP_030108489
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39340,829,661 - 40,892,171 (+)NCBI
GRCm38340,875,242 - 40,937,736 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036163124   ⟹   XP_036019017
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39340,848,786 - 40,892,165 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001783694
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39340,829,657 - 40,892,171 (+)NCBI
GRCm38340,871,095 - 40,937,736 (+)NCBI
Sequence:
RefSeq Acc Id: NP_080898   ⟸   NM_026622
- Peptide Label: isoform a precursor
- UniProtKB: Q8C1A9 (UniProtKB/Swiss-Prot),   Q8C0I3 (UniProtKB/Swiss-Prot),   Q562E0 (UniProtKB/Swiss-Prot),   Q3TQS7 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006500842   ⟸   XM_006500779
- Peptide Label: isoform X2
- UniProtKB: B7ZNF5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017175080   ⟸   XM_017319591
- Peptide Label: isoform X1
- UniProtKB: Q8C1A9 (UniProtKB/Swiss-Prot),   Q8C0I3 (UniProtKB/Swiss-Prot),   Q562E0 (UniProtKB/Swiss-Prot),   Q3TQS7 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_017175081   ⟸   XM_017319592
- Peptide Label: isoform X3
- UniProtKB: B7ZNF5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030108489   ⟸   XM_030252629
- Peptide Label: isoform X3
- UniProtKB: B7ZNF5 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001364039   ⟸   NM_001377110
- Peptide Label: isoform b
- UniProtKB: B7ZNF5 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001364040   ⟸   NM_001377111
- Peptide Label: isoform c
- UniProtKB: B7ZNF5 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001364041   ⟸   NM_001377112
- Peptide Label: isoform c
- UniProtKB: B7ZNF5 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSMUSP00000124430   ⟸   ENSMUST00000159774
Ensembl Acc Id: ENSMUSP00000145006   ⟸   ENSMUST00000203650
Ensembl Acc Id: ENSMUSP00000145150   ⟸   ENSMUST00000203892
Ensembl Acc Id: ENSMUSP00000144946   ⟸   ENSMUST00000203214
Ensembl Acc Id: ENSMUSP00000145313   ⟸   ENSMUST00000203472
Ensembl Acc Id: ENSMUSP00000103713   ⟸   ENSMUST00000108078
Ensembl Acc Id: ENSMUSP00000103712   ⟸   ENSMUST00000108077
Ensembl Acc Id: ENSMUSP00000145095   ⟸   ENSMUST00000205065
Ensembl Acc Id: ENSMUSP00000145007   ⟸   ENSMUST00000204496
RefSeq Acc Id: XP_036019017   ⟸   XM_036163124
- Peptide Label: isoform X3
- UniProtKB: B7ZNF5 (UniProtKB/TrEMBL)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8C1A9-F1-model_v2 AlphaFold Q8C1A9 1-464 view protein structure

Promoters
RGD ID:6833183
Promoter ID:MM_KWN:34193
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day1,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Liver,   Lung
Transcripts:ENSMUST00000060415,   NM_026622,   UC008PBS.1,   UC008PBT.1,   UC008PBU.1,   UC008PBV.1,   UC008PBW.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36340,697,806 - 40,698,306 (+)MPROMDB
RGD ID:6880556
Promoter ID:EPDNEW_M3729
Type:initiation region
Name:Abhd18_1
Description:Mus musculus abhydrolase domain containing 18 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M3731  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38340,894,246 - 40,894,306EPDNEW
RGD ID:6880560
Promoter ID:EPDNEW_M3731
Type:multiple initiation site
Name:Abhd18_2
Description:Mus musculus abhydrolase domain containing 18 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M3729  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38340,932,968 - 40,933,028EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1915468 AgrOrtholog
Ensembl Genes ENSMUSG00000037818 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000108078.9 UniProtKB/Swiss-Prot
  ENSMUST00000159774 ENTREZGENE
  ENSMUST00000159774.7 UniProtKB/Swiss-Prot
  ENSMUST00000203214.3 UniProtKB/TrEMBL
  ENSMUST00000203472.3 UniProtKB/TrEMBL
  ENSMUST00000203650.3 UniProtKB/TrEMBL
  ENSMUST00000203892.2 UniProtKB/TrEMBL
  ENSMUST00000204496 ENTREZGENE
  ENSMUST00000204496.3 UniProtKB/TrEMBL
  ENSMUST00000205065.3 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.1820 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro AB_hydrolase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ABHD18 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:269423 UniProtKB/Swiss-Prot
MGD MGI:1915468 ENTREZGENE
NCBI Gene Abhd18 ENTREZGENE
PANTHER PROTEIN ABHD18 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR13617 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam DUF2048 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Abhd18 PhenoGen
Superfamily-SCOP SSF53474 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0N4SV44_MOUSE UniProtKB/TrEMBL
  ABD18_MOUSE UniProtKB/Swiss-Prot
  B7ZNF5 ENTREZGENE, UniProtKB/TrEMBL
  E0CXH3_MOUSE UniProtKB/TrEMBL
  E0CXU9_MOUSE UniProtKB/TrEMBL
  E0CXW1_MOUSE UniProtKB/TrEMBL
  E9PWH0_MOUSE UniProtKB/TrEMBL
  Q3TQS7 ENTREZGENE
  Q562E0 ENTREZGENE
  Q8C0I3 ENTREZGENE
  Q8C1A9 ENTREZGENE
  Q921P1_MOUSE UniProtKB/TrEMBL
UniProt Secondary Q3TQS7 UniProtKB/Swiss-Prot
  Q562E0 UniProtKB/Swiss-Prot
  Q8C0I3 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2024-08-26 Abhd18  abhydrolase domain containing 18  3110057O12Rik  RIKEN cDNA 3110057O12 gene  Symbol and/or name updated 27372883 PROVISIONAL
2024-08-21 3110057O12Rik  RIKEN cDNA 3110057O12 gene  Abhd18  abhydrolase domain containing 18  Symbol and/or name change 5135510 APPROVED
2015-12-01 Abhd18  abhydrolase domain containing 18  3110057O12Rik  RIKEN cDNA 3110057O12 gene  Symbol and/or name change 5135510 APPROVED