Hspa4l (heat shock protein 4 like) - Rat Genome Database

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Gene: Hspa4l (heat shock protein 4 like) Mus musculus
Analyze
Symbol: Hspa4l
Name: heat shock protein 4 like
RGD ID: 1550507
MGI Page MGI
Description: Predicted to enable adenyl-nucleotide exchange factor activity. Predicted to be involved in protein folding. Predicted to be located in cytoplasm. Predicted to be active in cytosol and nucleus. Is expressed in several structures, including alimentary system; genitourinary system; liver and biliary system; nervous system; and sensory organ. Orthologous to human HSPA4L (heat shock protein family A (Hsp70) member 4 like).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 94kD; 94kDa; AI461691; APG; APG-1; heat shock 70 kDa protein 4L; heat shock 70-related protein APG-1; heat shock 70kDa protein 4 like; MGC117843; Os; osmotic stress protein 94; Osp94
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39340,698,664 - 40,750,538 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl340,699,814 - 40,750,538 (+)EnsemblGRCm39 Ensembl
GRCm38340,744,500 - 40,796,103 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl340,745,382 - 40,796,103 (+)EnsemblGRCm38mm10GRCm38
GRCm38.p6 Ensembl340,744,495 - 40,796,103 (+)EnsemblGRCm38mm10GRCm38
MGSCv37340,549,535 - 40,594,287 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36340,842,162 - 40,886,914 (+)NCBIMGSCv36mm8
Celera340,475,179 - 40,519,922 (+)NCBICelera
Cytogenetic Map3BNCBI
cM Map319.51NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-epigallocatechin 3-gallate  (ISO)
(1->4)-beta-D-glucan  (EXP)
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (ISO)
1H-pyrazole  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dinitrotoluene  (ISO)
2-butoxyethanol  (EXP)
3,3',4,4',5-pentachlorobiphenyl  (EXP)
3,4-methylenedioxymethamphetamine  (EXP)
4,4'-diaminodiphenylmethane  (EXP)
4-hydroxynon-2-enal  (EXP)
4-hydroxyphenyl retinamide  (EXP)
4-phenylbutyric acid  (ISO)
6-propyl-2-thiouracil  (ISO)
aconitine  (ISO)
acrylamide  (ISO)
aflatoxin B1  (EXP,ISO)
aflatoxin M1  (ISO)
all-trans-retinoic acid  (ISO)
antirheumatic drug  (ISO)
aristolochic acid A  (ISO)
arsenite(3-)  (EXP)
arsenous acid  (ISO)
benzo[a]pyrene  (EXP,ISO)
beta-naphthoflavone  (EXP)
bis(2-ethylhexyl) phthalate  (EXP)
bisphenol A  (ISO)
bortezomib  (ISO)
Brodifacoum  (ISO)
bromobenzene  (ISO)
cadmium atom  (EXP,ISO)
cadmium dichloride  (EXP)
caffeine  (ISO)
carbamazepine  (ISO)
carbon nanotube  (EXP)
chlorpyrifos  (EXP)
choline  (EXP)
chromium(6+)  (ISO)
ciguatoxin CTX1B  (EXP)
cisplatin  (ISO)
clofibrate  (EXP)
copper(II) sulfate  (ISO)
coumestrol  (ISO)
cyclosporin A  (ISO)
diarsenic trioxide  (ISO)
dibenz[a,h]anthracene  (EXP)
dibenzo[a,l]pyrene  (EXP)
dimethylarsinic acid  (EXP)
dioxygen  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
endosulfan  (ISO)
Enterolactone  (ISO)
entinostat  (ISO)
enzyme inhibitor  (ISO)
epoxiconazole  (EXP)
ethanol  (EXP,ISO)
fenofibrate  (EXP)
fenvalerate  (ISO)
flutamide  (ISO)
folic acid  (EXP,ISO)
furan  (EXP,ISO)
genistein  (ISO)
gentamycin  (ISO)
hydrogen cyanide  (EXP)
hydrogen sulfide  (EXP)
irinotecan  (ISO)
ivermectin  (ISO)
L-methionine  (EXP)
leflunomide  (ISO)
manganese(II) chloride  (ISO)
mercury dibromide  (ISO)
mercury dichloride  (ISO)
methidathion  (EXP)
methyl methanesulfonate  (ISO)
methylisothiazolinone  (ISO)
methylmercury chloride  (ISO)
methylseleninic acid  (ISO)
motexafin gadolinium  (ISO)
N-methyl-4-phenylpyridinium  (ISO)
N-nitrosodiethylamine  (EXP)
Nonidet P-40  (ISO)
p-chloromercuribenzoic acid  (ISO)
panobinostat  (ISO)
paracetamol  (ISO)
perfluorohexanesulfonic acid  (EXP)
perfluorooctane-1-sulfonic acid  (EXP)
phenformin  (ISO)
phenobarbital  (EXP)
phenylmercury acetate  (ISO)
pirinixic acid  (EXP)
piroxicam  (ISO)
potassium chromate  (EXP,ISO)
potassium cyanide  (EXP)
potassium dichromate  (EXP)
progesterone  (EXP)
propiconazole  (EXP,ISO)
quercetin  (ISO)
resorcinol  (ISO)
resveratrol  (EXP)
retinyl acetate  (EXP)
rotenone  (ISO)
SB 431542  (ISO)
silver atom  (ISO)
silver(0)  (ISO)
sodium arsenite  (EXP,ISO)
tamoxifen  (EXP)
temozolomide  (ISO)
tetrachloromethane  (EXP)
thimerosal  (ISO)
thioacetamide  (ISO)
titanium dioxide  (EXP)
triadimefon  (ISO)
trichloroethene  (ISO)
trichostatin A  (ISO)
Triptolide  (EXP)
triptonide  (EXP)
troglitazone  (EXP)
tungsten  (EXP)
urethane  (ISO)
valproic acid  (EXP,ISO)
vinclozolin  (EXP,ISO)
vorinostat  (ISO)
zinc acetate  (ISO)
zinc atom  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IEA)
cytosol  (IBA,ISO)
nucleus  (IBA,ISO)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. MGDs mouse GO annotations MGD data from the GO Consortium
2. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
3. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
4. Mouse MP Annotation Import Pipeline RGD automated import pipeline
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
6. Database resources of the National Center for Biotechnology Information. Wheeler DL, etal., Nucleic Acids Res 2001 Jan 1;29(1):11-6.
Additional References at PubMed
PMID:8647834   PMID:8889548   PMID:9006898   PMID:9144406   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12477932   PMID:15018608   PMID:15489334  
PMID:16141072   PMID:16141073   PMID:16923965   PMID:16964442   PMID:17114649   PMID:17431699   PMID:17971504   PMID:19171884   PMID:19520787   PMID:21267068   PMID:21487003   PMID:21677750  
PMID:21873635   PMID:22582773   PMID:23055941   PMID:23909438   PMID:23980576   PMID:27113764   PMID:27114530   PMID:27889896   PMID:30068389   PMID:30333137   PMID:30562941   PMID:30914484  
PMID:31040226   PMID:32325033   PMID:33894646   PMID:35449600   PMID:36114006   PMID:36293380  


Genomics

Comparative Map Data
Hspa4l
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39340,698,664 - 40,750,538 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl340,699,814 - 40,750,538 (+)EnsemblGRCm39 Ensembl
GRCm38340,744,500 - 40,796,103 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl340,745,382 - 40,796,103 (+)EnsemblGRCm38mm10GRCm38
GRCm38.p6 Ensembl340,744,495 - 40,796,103 (+)EnsemblGRCm38mm10GRCm38
MGSCv37340,549,535 - 40,594,287 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36340,842,162 - 40,886,914 (+)NCBIMGSCv36mm8
Celera340,475,179 - 40,519,922 (+)NCBICelera
Cytogenetic Map3BNCBI
cM Map319.51NCBI
HSPA4L
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh384127,781,796 - 127,840,733 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl4127,781,821 - 127,840,733 (+)EnsemblGRCh38hg38GRCh38
GRCh374128,702,951 - 128,761,888 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 364128,922,903 - 128,973,976 (+)NCBINCBI36Build 36hg18NCBI36
Build 344129,061,057 - 129,112,127NCBI
Celera4126,082,422 - 126,133,472 (+)NCBICelera
Cytogenetic Map4q28.1NCBI
HuRef4124,431,126 - 124,482,187 (+)NCBIHuRef
CHM1_14128,679,911 - 128,730,981 (+)NCBICHM1_1
T2T-CHM13v2.04131,084,803 - 131,143,731 (+)NCBIT2T-CHM13v2.0
Hspa4l
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82125,668,346 - 125,726,404 (+)NCBIGRCr8
mRatBN7.22123,740,384 - 123,793,088 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2123,740,384 - 123,793,084 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2130,310,874 - 130,363,567 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02128,423,324 - 128,476,003 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02123,052,445 - 123,105,139 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02127,625,737 - 127,682,864 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2127,625,683 - 127,677,503 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02147,228,755 - 147,285,924 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42127,697,504 - 127,751,085 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12127,647,466 - 127,700,988 (+)NCBI
Celera2118,648,388 - 118,701,051 (+)NCBICelera
Cytogenetic Map2q26NCBI
Hspa4l
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542813,589,532 - 13,644,079 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542813,589,532 - 13,644,079 (-)NCBIChiLan1.0ChiLan1.0
HSPA4L
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v23125,539,361 - 125,612,024 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan14125,805,487 - 125,870,165 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v04119,946,233 - 120,004,602 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.14131,251,993 - 131,303,499 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl4131,251,354 - 131,303,499 (+)Ensemblpanpan1.1panPan2
HSPA4L
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11913,105,017 - 13,157,047 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1913,106,044 - 13,156,886 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1913,294,730 - 13,344,806 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01913,193,960 - 13,247,047 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1913,195,035 - 13,245,775 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11913,167,146 - 13,220,197 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01913,453,641 - 13,506,105 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01913,914,616 - 13,967,679 (-)NCBIUU_Cfam_GSD_1.0
Hspa4l
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530161,577,372 - 61,620,976 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366422,868,950 - 2,914,995 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366422,869,275 - 2,907,818 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
HSPA4L
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl897,032,189 - 97,089,949 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1897,032,179 - 97,088,240 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.28103,897,623 - 103,953,357 (-)NCBISscrofa10.2Sscrofa10.2susScr3
HSPA4L
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1774,901,060 - 74,956,458 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl774,901,029 - 74,955,328 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603754,035,156 - 54,090,683 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Hspa4l
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247778,711,869 - 8,780,297 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247778,711,780 - 8,780,091 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Hspa4l
1609 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2670
Count of miRNA genes:879
Interacting mature miRNAs:1238
Transcripts:ENSMUST00000077083, ENSMUST00000108086, ENSMUST00000159819, ENSMUST00000160026, ENSMUST00000161806, ENSMUST00000162279, ENSMUST00000162743
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
26884436Zlq3_mzygomatic length QTL 3, 10 week (mouse)33265060142405761Mouse
1558925Hivan1_mHIV-associated nephropathy 1 (mouse)Not determined3758617468716946Mouse
4142399Aec1_mautoimmune exocrinopathy 1 (mouse)Not determined7586174102690034Mouse
4141116Lgaq4_mlate growth adjusted QTL 4 (mouse)Not determined1024922183184946Mouse
4141255W10q3_mweight 10 weeks QTL 3 (mouse)Not determined1024922183184946Mouse
4141563Lgq3_mlate growth QTL 3 (mouse)Not determined1024922183184946Mouse
39128206Lwq18_mliver weight QTL 18 (mouse)31024922183184946Mouse
1357584Splq6_mspleen weight QTL 6 (mouse)Not determined31024922183184946Mouse
1357440Hrtpq1_mheart weight percentage QTL 1 (mouse)Not determined31024922183184946Mouse
1301358Eae20_mexperimental allergic encephalomyelitis 20 (mouse)Not determined31163045345630591Mouse
26884427Cvht4_mcranial vault height 4, 10 week (mouse)316054164109707316Mouse
13207570Tcq12_mtotal cholesterol QTL 12 (mouse)316504164130163649Mouse
4142092Tgq13_mtriglyceride QTL 13 (mouse)Not determined1828816852288168Mouse
1301114Ssial2_msusceptibility to sialadenitis 2 (mouse)Not determined32017486254180103Mouse
26884422Cvht7_mcranial vault height 7, 16 week (mouse)328954149118893649Mouse
1302056Orgwq4_morgan weight QTL 4 (mouse)Not determined330067588147304689Mouse
1300961Bh4p_mbar holding four paws (mouse)Not determined33183785465837997Mouse
12910778Pwgrq13_mpost-weaning growth rate QTL 13 (mouse)33263576058017363Mouse
12910781Pwgrq12_mpost-weaning growth rate QTL 12 (mouse)33263576058017363Mouse
1357689Mdmsc1_mmodifier of muscularity 1 (mouse)Not determined33332720145916479Mouse
10412073Ssen2_msuseptibility to Sendai virus 2 (mouse)Not determined33353546567535615Mouse
9587784Afw13_mabdominal fat weight QTL 13 (mouse)Not determined33375204567752228Mouse
10043882Bwtq13_mbody weight QTL 13 (mouse)Not determined33375204567752228Mouse
15039332Nmrs6_mNAFLD-associated magnetic resonance shift 6 (mouse)33417074168170741Mouse
15039336Nmrs2_mNAFLD-associated magnetic resonance shift 2 (mouse)33457610368576103Mouse
18337272Bmd46_mbone mineral density 46, males (mouse)33540742169407421Mouse
14746977Manh53_mmandible shape 53 (mouse)33592528069925280Mouse
1301705Sles3_msystemic lupus erythmatosus suppressor 3 (mouse)Not determined337174862143353183Mouse
1300587Aod2_mautoimmune ovarian dysgenesis 2 (mouse)Not determined33717974268716946Mouse
11041901Lmr11b_mleishmaniasis resistance 11b (mouse)33970410273704231Mouse
11039513Ltpr3a_mLeishmania tropica response 3a (mouse)33970410273704231Mouse
1301585Cd4ts1_mCD4 T cell subset 1 (mouse)Not determined33970410273704231Mouse
10755516Amzn1_manatomical modifier of Zfp423 1 (mouse)33970410273704231Mouse

Markers in Region
AI461691  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38340,791,186 - 40,791,272UniSTSGRCm38
MGSCv37340,595,108 - 40,595,194UniSTSGRCm37
Celera340,520,743 - 40,520,829UniSTS
Cytogenetic Map3BUniSTS
Hspa4l  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38340,789,236 - 40,789,554UniSTSGRCm38
MGSCv37340,593,158 - 40,593,476UniSTSGRCm37
Celera340,518,793 - 40,519,111UniSTS
Cytogenetic Map3BUniSTS
U23921  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38340,789,422 - 40,789,553UniSTSGRCm38
MGSCv37340,593,344 - 40,593,475UniSTSGRCm37
Celera340,518,979 - 40,519,110UniSTS
Cytogenetic Map3BUniSTS
Osp94  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38340,789,295 - 40,789,426UniSTSGRCm38
MGSCv37340,593,217 - 40,593,348UniSTSGRCm37
Celera340,518,852 - 40,518,983UniSTS
Cytogenetic Map3BUniSTS
cM Map3 UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001410463 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001410464 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001410465 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_011020 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB001926 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB121137 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC146980 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC160757 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK032066 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK033950 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK039283 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK050997 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK132132 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK144225 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK161429 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK163459 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC012712 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC057002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC110662 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466530 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  D49482 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U23921 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000108086   ⟹   ENSMUSP00000103721
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl340,700,300 - 40,744,019 (+)Ensembl
GRCm38.p6 Ensembl340,745,868 - 40,789,584 (+)Ensembl
RefSeq Acc Id: ENSMUST00000203267
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl340,700,015 - 40,713,028 (+)Ensembl
GRCm38.p6 Ensembl340,745,583 - 40,758,596 (+)Ensembl
RefSeq Acc Id: ENSMUST00000203353   ⟹   ENSMUSP00000144787
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl340,699,814 - 40,736,030 (+)Ensembl
GRCm38.p6 Ensembl340,745,382 - 40,781,598 (+)Ensembl
RefSeq Acc Id: ENSMUST00000203425
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl340,727,076 - 40,736,272 (+)Ensembl
GRCm38.p6 Ensembl340,772,644 - 40,781,840 (+)Ensembl
RefSeq Acc Id: ENSMUST00000203496   ⟹   ENSMUSP00000145243
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl340,699,916 - 40,715,300 (+)Ensembl
GRCm38.p6 Ensembl340,745,484 - 40,760,868 (+)Ensembl
RefSeq Acc Id: ENSMUST00000204174
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl340,738,442 - 40,741,252 (+)Ensembl
GRCm38.p6 Ensembl340,784,010 - 40,786,820 (+)Ensembl
RefSeq Acc Id: ENSMUST00000204702   ⟹   ENSMUSP00000145468
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl340,699,862 - 40,750,538 (+)Ensembl
GRCm38.p6 Ensembl340,745,430 - 40,796,103 (+)Ensembl
RefSeq Acc Id: NM_001410463   ⟹   NP_001397392
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39340,698,664 - 40,750,538 (+)NCBI
RefSeq Acc Id: NM_001410464   ⟹   NP_001397393
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39340,699,451 - 40,750,538 (+)NCBI
RefSeq Acc Id: NM_001410465   ⟹   NP_001397394
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39340,699,916 - 40,750,538 (+)NCBI
RefSeq Acc Id: NM_011020   ⟹   NP_035150
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39340,699,916 - 40,750,538 (+)NCBI
GRCm38340,745,613 - 40,790,365 (+)NCBI
MGSCv37340,549,535 - 40,594,287 (+)RGD
Celera340,475,179 - 40,519,922 (+)RGD
cM Map3 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_035150   ⟸   NM_011020
- Peptide Label: isoform 1
- UniProtKB: Q8CC45 (UniProtKB/Swiss-Prot),   Q8BQD0 (UniProtKB/Swiss-Prot),   Q3UNG4 (UniProtKB/Swiss-Prot),   Q3TQN2 (UniProtKB/Swiss-Prot),   P97854 (UniProtKB/Swiss-Prot),   Q91X29 (UniProtKB/Swiss-Prot),   P48722 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000145243   ⟸   ENSMUST00000203496
RefSeq Acc Id: ENSMUSP00000144787   ⟸   ENSMUST00000203353
RefSeq Acc Id: ENSMUSP00000103721   ⟸   ENSMUST00000108086
RefSeq Acc Id: ENSMUSP00000145468   ⟸   ENSMUST00000204702
RefSeq Acc Id: NP_001397392   ⟸   NM_001410463
- Peptide Label: isoform 1
- UniProtKB: Q8CC45 (UniProtKB/Swiss-Prot),   Q8BQD0 (UniProtKB/Swiss-Prot),   Q3UNG4 (UniProtKB/Swiss-Prot),   Q3TQN2 (UniProtKB/Swiss-Prot),   P97854 (UniProtKB/Swiss-Prot),   P48722 (UniProtKB/Swiss-Prot),   Q91X29 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001397393   ⟸   NM_001410464
- Peptide Label: isoform 1
- UniProtKB: Q8CC45 (UniProtKB/Swiss-Prot),   Q8BQD0 (UniProtKB/Swiss-Prot),   Q3UNG4 (UniProtKB/Swiss-Prot),   Q3TQN2 (UniProtKB/Swiss-Prot),   P97854 (UniProtKB/Swiss-Prot),   P48722 (UniProtKB/Swiss-Prot),   Q91X29 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001397394   ⟸   NM_001410465
- Peptide Label: isoform 2

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P48722-F1-model_v2 AlphaFold P48722 1-838 view protein structure

Promoters
RGD ID:6833970
Promoter ID:MM_KWN:34182
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney
Transcripts:OTTMUST00000057501
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36340,548,436 - 40,548,936 (+)MPROMDB
RGD ID:6833969
Promoter ID:MM_KWN:34183
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Kidney,   Liver,   Lung
Transcripts:OTTMUST00000057497,   OTTMUST00000057498,   OTTMUST00000057499,   OTTMUST00000057500
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36340,548,906 - 40,549,607 (+)MPROMDB
RGD ID:6880546
Promoter ID:EPDNEW_M3723
Type:initiation region
Name:Hspa4l_1
Description:Mus musculus heat shock protein 4 like , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38340,745,607 - 40,745,667EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:107422 AgrOrtholog
Ensembl Genes ENSMUSG00000025757 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000108086.7 UniProtKB/Swiss-Prot
  ENSMUST00000203353.3 UniProtKB/TrEMBL
  ENSMUST00000203496.3 UniProtKB/TrEMBL
  ENSMUST00000204702 ENTREZGENE
  ENSMUST00000204702.3 UniProtKB/Swiss-Prot
Gene3D-CATH 1.20.1270.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.30.30.30 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.30.420.40 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro ATPase_NBD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Heat_shock_70_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HSP70_C_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HSP70_peptide-bd_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Hsp_70_fam UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HSPA4L_NBD UniProtKB/Swiss-Prot
KEGG Report mmu:18415 UniProtKB/Swiss-Prot
MGD MGI:107422 ENTREZGENE
NCBI Gene 18415 ENTREZGENE
PANTHER HEAT SHOCK 70 KDA PROTEIN 4L UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HSC70CB, ISOFORM G-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam HSP70 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Hspa4l PhenoGen
PRINTS HEATSHOCK70 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE HSP70_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HSP70_3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF100920 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF100934 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF53067 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0N4SVU2_MOUSE UniProtKB/TrEMBL
  E0CY23_MOUSE UniProtKB/TrEMBL
  HS74L_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  P97854 ENTREZGENE
  Q3TQN2 ENTREZGENE
  Q3TTD4_MOUSE UniProtKB/TrEMBL
  Q3UNG4 ENTREZGENE
  Q8BQD0 ENTREZGENE
  Q8CC45 ENTREZGENE
  Q91X29 ENTREZGENE
UniProt Secondary P97854 UniProtKB/Swiss-Prot
  Q3TQN2 UniProtKB/Swiss-Prot
  Q3UNG4 UniProtKB/Swiss-Prot
  Q8BQD0 UniProtKB/Swiss-Prot
  Q8CC45 UniProtKB/Swiss-Prot
  Q91X29 UniProtKB/Swiss-Prot