Gm57712 (predicted gene, 57712) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Gm57712 (predicted gene, 57712) Mus musculus
Analyze
Symbol: Gm57712 (Ensembl: AC132259.1)
Name: predicted gene, 57712
RGD ID: 39130925
MGI Page MGI
Description:
Type: snorna
RefSeq Status: MODEL
Previously known as: LOC115489833; small nucleolar RNA SNORA48
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39347,245,393 - 47,245,536 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl347,245,393 - 47,245,536 (-)EnsemblGRCm39 Ensembl
GRCm38347,290,958 - 47,291,101 (-)NCBIGRCm38GRCm38mm10GRCm38
Cytogenetic Map3CNCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




.

.
Variants in Gm57712
6 total Variants

1 to 10 of 34 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
4142399Aec1_mautoimmune exocrinopathy 1 (mouse)Not determined7586174102690034Mouse
14746977Manh53_mmandible shape 53 (mouse)33592528069925280Mouse
15039332Nmrs6_mNAFLD-associated magnetic resonance shift 6 (mouse)33417074168170741Mouse
1301585Cd4ts1_mCD4 T cell subset 1 (mouse)Not determined33970410273704231Mouse
4141116Lgaq4_mlate growth adjusted QTL 4 (mouse)Not determined1024922183184946Mouse
4141563Lgq3_mlate growth QTL 3 (mouse)Not determined1024922183184946Mouse
1357584Splq6_mspleen weight QTL 6 (mouse)Not determined31024922183184946Mouse
11041901Lmr11b_mleishmaniasis resistance 11b (mouse)33970410273704231Mouse
26884380Skwq1_mskull length QTL 1, 5 week (mouse)343954435101607316Mouse
15039336Nmrs2_mNAFLD-associated magnetic resonance shift 2 (mouse)33457610368576103Mouse

1 to 10 of 34 rows





RefSeq Transcripts XR_004941714 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC132259 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000240147
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl347,245,393 - 47,245,536 (-)Ensembl
RefSeq Acc Id: XR_004941714
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39347,245,393 - 47,245,536 (-)NCBI
Sequence:


Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000119400 Ensembl
MGD MGI:7512379 ENTREZGENE
NCBI Gene LOC115489833 ENTREZGENE
PhenoGen Gm57712 PhenoGen


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-08-22 Gm57712  predicted gene, 57712  LOC115489833  small nucleolar RNA SNORA48  Symbol and/or name change 5135510 APPROVED