Mag (myelin-associated glycoprotein) - Rat Genome Database

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Gene: Mag (myelin-associated glycoprotein) Mus musculus
Analyze
Symbol: Mag
Name: myelin-associated glycoprotein
RGD ID: 736776
MGI Page MGI
Description: Enables ganglioside GT1b binding activity; protein homodimerization activity; and sialic acid binding activity. Involved in several processes, including central nervous system myelin formation; negative regulation of neuron apoptotic process; and positive regulation of myelination. Acts upstream of or within axon regeneration and transmission of nerve impulse. Located in Schmidt-Lanterman incisure; myelin sheath adaxonal region; and paranode region of axon. Is integral component of plasma membrane. Is expressed in several structures, including alimentary system; genitourinary system; hemolymphoid system gland; liver and biliary system; and nervous system. Human ortholog(s) of this gene implicated in hereditary spastic paraplegia 75. Orthologous to human MAG (myelin associated glycoprotein).
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: Gm; Gma; MGC123387; sigle; siglec-4a
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39730,598,600 - 30,614,347 (-)NCBIGRCm39mm39
GRCm39 Ensembl730,598,601 - 30,614,298 (-)Ensembl
GRCm38730,899,175 - 30,914,922 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl730,899,176 - 30,914,873 (-)EnsemblGRCm38mm10GRCm38
MGSCv37731,684,202 - 31,699,851 (-)NCBIGRCm37mm9NCBIm37
MGSCv36730,607,943 - 30,623,592 (-)NCBImm8
Celera725,483,485 - 25,499,089 (-)NCBICelera
Cytogenetic Map7B1NCBI
cM Map719.26NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Molecular cloning and primary structure of myelin-associated glycoprotein. Arquint M, etal., Proc Natl Acad Sci U S A 1987 Jan;84(2):600-4.
2. Sequential loss of myelin proteins during Wallerian degeneration in the rat spinal cord. Buss A and Schwab ME, Glia. 2003 Jun;42(4):424-32.
3. Local down-regulation of myelin-associated glycoprotein permits axonal sprouting with chronic nerve compression injury. Gupta R, etal., Exp Neurol. 2006 Aug;200(2):418-29. Epub 2006 Jun 9.
4. Identification of neuroprotective properties of anti-MAG antibody: a novel approach for the treatment of stroke? Irving EA, etal., J Cereb Blood Flow Metab. 2005 Jan;25(1):98-107.
5. Quantitation of the myelin-associated glycoprotein in human nervous tissue from controls and multiple sclerosis patients. Johnson D, etal., J Neurochem. 1986 Apr;46(4):1086-93.
6. Myelin-associated glycoprotein inhibits the neuronal differentiation of neural progenitors. Li X, etal., Neuroreport. 2009 May 6;20(7):708-12. doi: 10.1097/WNR.0b013e32832aa942.
7. Alterations of myelin proteins in inflammatory demyelination of BALB/c mice caused by Angiostrongylus cantonensis. Lin KY, etal., Vet Parasitol. 2010 Jul 15;171(1-2):74-80. doi: 10.1016/j.vetpar.2010.03.019. Epub 2010 Mar 30.
8. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
9. MGDs mouse GO annotations MGD data from the GO Consortium
10. MGD IEA MGD IEA
11. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
12. Mouse MP Annotation Import Pipeline RGD automated import pipeline
13. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
14. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
15. Putative role of calpain in the pathophysiology of experimental optic neuritis. Shields DC and Banik NL, Exp Eye Res. 1998 Oct;67(4):403-10.
16. Tissue sparing and functional recovery following experimental traumatic brain injury is provided by treatment with an anti-myelin-associated glycoprotein antibody. Thompson HJ, etal., Eur J Neurosci. 2006 Dec;24(11):3063-72.
17. Myelin-associated glycoprotein reduces axonal branching and enhances functional recovery after sciatic nerve transection in rats. Tomita K, etal., Glia. 2007 Nov 1;55(14):1498-507.
Additional References at PubMed
PMID:1592203   PMID:1638085   PMID:1676977   PMID:1697293   PMID:1712586   PMID:1716323   PMID:1718333   PMID:1970330   PMID:1981054   PMID:2307474   PMID:2441806   PMID:2447011  
PMID:2447245   PMID:2454205   PMID:2482022   PMID:2579197   PMID:2842249   PMID:3113327   PMID:3418751   PMID:3856323   PMID:6321035   PMID:7516497   PMID:7519026   PMID:7524110  
PMID:7533044   PMID:7539694   PMID:7545761   PMID:7558238   PMID:7568881   PMID:7568894   PMID:7690558   PMID:7935840   PMID:8034307   PMID:8100843   PMID:8281015   PMID:8551331  
PMID:8557747   PMID:8662221   PMID:8662541   PMID:8663987   PMID:8812484   PMID:8818975   PMID:8833093   PMID:8845160   PMID:8875894   PMID:8889548   PMID:8903733   PMID:9011400  
PMID:9034827   PMID:9122225   PMID:9166596   PMID:9173930   PMID:9218460   PMID:9262180   PMID:9355741   PMID:9371744   PMID:9373041   PMID:9403069   PMID:9469574   PMID:9482781  
PMID:9482783   PMID:9615220   PMID:9671673   PMID:9799616   PMID:9799842   PMID:10103075   PMID:10349636   PMID:10366628   PMID:10457367   PMID:10477768   PMID:10625333   PMID:10625334  
PMID:10884306   PMID:11007902   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11283023   PMID:11440986   PMID:11562920   PMID:11746780   PMID:11777918   PMID:11799060   PMID:11827985  
PMID:12089450   PMID:12111829   PMID:12125072   PMID:12186854   PMID:12365566   PMID:12466851   PMID:12477932   PMID:12654290   PMID:12718855   PMID:12839991   PMID:12975355   PMID:14532115  
PMID:14534257   PMID:15121177   PMID:15146195   PMID:15485773   PMID:15579137   PMID:15601927   PMID:15731004   PMID:15896979   PMID:15953602   PMID:16141072   PMID:16141073   PMID:16442810  
PMID:16481432   PMID:16602821   PMID:17145500   PMID:17329206   PMID:17634366   PMID:17640868   PMID:17823957   PMID:18287202   PMID:18303048   PMID:18411262   PMID:18490449   PMID:18501628  
PMID:18524893   PMID:18614675   PMID:18632947   PMID:19052207   PMID:19156870   PMID:19158290   PMID:19179536   PMID:19349584   PMID:19373938   PMID:19838178   PMID:19855010   PMID:20071523  
PMID:20091777   PMID:20420580   PMID:20484625   PMID:20547125   PMID:20731761   PMID:20956316   PMID:21210220   PMID:21214567   PMID:21220101   PMID:21238928   PMID:21267068   PMID:21364532  
PMID:21491433   PMID:21677750   PMID:21824506   PMID:21873635   PMID:22337526   PMID:22405202   PMID:22406547   PMID:22411787   PMID:22529900   PMID:22583768   PMID:22688009   PMID:22794259  
PMID:22940629   PMID:23074226   PMID:23118208   PMID:23308235   PMID:23704325   PMID:23780694   PMID:24081651   PMID:24101522   PMID:24129569   PMID:24194600   PMID:24917498   PMID:25866077  
PMID:26335717   PMID:26389685   PMID:26441514   PMID:26637354   PMID:26928066   PMID:27008179   PMID:27149841   PMID:27213272   PMID:27504968   PMID:27534441   PMID:27568567   PMID:27583434  
PMID:27626380   PMID:27889898   PMID:27922006   PMID:28336932   PMID:28522736   PMID:28981898   PMID:30068389   PMID:30664625   PMID:31138677   PMID:31451613   PMID:31641127   PMID:31680852  
PMID:32266943   PMID:32325033   PMID:32581705   PMID:32817053   PMID:32908139   PMID:33942723   PMID:34184027   PMID:34400844  


Genomics

Comparative Map Data
Mag
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39730,598,600 - 30,614,347 (-)NCBIGRCm39mm39
GRCm39 Ensembl730,598,601 - 30,614,298 (-)Ensembl
GRCm38730,899,175 - 30,914,922 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl730,899,176 - 30,914,873 (-)EnsemblGRCm38mm10GRCm38
MGSCv37731,684,202 - 31,699,851 (-)NCBIGRCm37mm9NCBIm37
MGSCv36730,607,943 - 30,623,592 (-)NCBImm8
Celera725,483,485 - 25,499,089 (-)NCBICelera
Cytogenetic Map7B1NCBI
cM Map719.26NCBI
MAG
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381935,292,161 - 35,313,807 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl1935,292,125 - 35,313,807 (+)EnsemblGRCh38hg38GRCh38
GRCh371935,783,064 - 35,804,710 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361940,474,878 - 40,496,547 (+)NCBINCBI36hg18NCBI36
Build 341940,474,877 - 40,496,547NCBI
Celera1932,496,476 - 32,518,142 (+)NCBI
Cytogenetic Map19q13.12NCBI
HuRef1932,291,486 - 32,313,186 (+)NCBIHuRef
CHM1_11935,784,610 - 35,806,322 (+)NCBICHM1_1
T2T-CHM13v2.01937,836,825 - 37,858,521 (+)NCBI
Mag
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2186,148,227 - 86,163,726 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl186,148,228 - 86,163,656 (-)Ensembl
Rnor_6.0189,345,325 - 89,360,905 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl189,345,429 - 89,360,733 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0190,500,932 - 90,516,312 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4185,954,511 - 85,970,832 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1186,032,629 - 86,048,943 (-)NCBI
Celera180,517,171 - 80,532,485 (-)NCBICelera
Cytogenetic Map1q21NCBI
Mag
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554684,584,162 - 4,598,914 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554684,584,068 - 4,598,772 (+)NCBIChiLan1.0ChiLan1.0
MAG
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11940,975,763 - 40,997,401 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1940,975,763 - 40,997,401 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01932,238,457 - 32,260,497 (+)NCBIMhudiblu_PPA_v0panPan3
MAG
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11117,288,306 - 117,301,975 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1117,288,343 - 117,302,386 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1116,691,276 - 116,704,898 (-)NCBI
ROS_Cfam_1.01117,888,249 - 117,901,841 (-)NCBI
ROS_Cfam_1.0 Ensembl1117,861,538 - 117,902,800 (-)Ensembl
UMICH_Zoey_3.11117,450,999 - 117,464,593 (-)NCBI
UNSW_CanFamBas_1.01117,076,835 - 117,090,444 (-)NCBI
UU_Cfam_GSD_1.01118,132,334 - 118,145,991 (-)NCBI
Mag
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934910,640,975 - 10,656,139 (+)NCBI
SpeTri2.0NW_004936570989,743 - 1,004,820 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MAG
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl644,794,204 - 44,809,926 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1644,794,197 - 44,809,933 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2640,214,125 - 40,221,021 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MAG
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1630,224,873 - 30,246,277 (+)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl630,227,442 - 30,246,481 (+)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660737,998,988 - 8,036,095 (+)NCBIVero_WHO_p1.0
Mag
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247948,236,223 - 8,258,361 (-)EnsemblHetGla_female_1.0hetGla2
HetGla 1.0NW_0046247948,237,005 - 8,251,933 (-)NCBIHetGla_female_1.0hetGla2

Position Markers
Mag  
Mouse AssemblyChrPosition (strand)SourceJBrowse
MGSCv37731,684,220 - 31,684,468UniSTSGRCm37
MGSCv37731,684,299 - 31,684,429UniSTSGRCm37
Celera725,483,582 - 25,483,712UniSTS
Celera725,483,503 - 25,483,751UniSTS
Cytogenetic Map7B1UniSTS
cM Map711.0UniSTS
cM Map711.0UniSTS
cM Map711.0UniSTS
Mag  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38730,899,280 - 30,899,410UniSTSGRCm38
MGSCv37731,684,299 - 31,684,429UniSTSGRCm37
Celera725,483,582 - 25,483,712UniSTS
Cytogenetic Map7B1UniSTS
cM Map711.0UniSTS
Mag  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38730,899,201 - 30,899,449UniSTSGRCm38
MGSCv37731,684,220 - 31,684,468UniSTSGRCm37
Celera725,483,503 - 25,483,751UniSTS
Cytogenetic Map7B1UniSTS
cM Map711.0UniSTS


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301572Sluc30_msusceptibility to lung cancer 30 (mouse)Not determined7243169636431844Mouse
1300722Sle3_msystemic lupus erythmatosus susceptibility 3 (mouse)Not determined7351172887142720Mouse
38501068Tip1_mtuberculosis immunophenotype 1, spleen CFU (mouse)7360299972549748Mouse
25314307Mlh1fc2_mMLH1 foci count 2 (mouse)76502999133501729Mouse
12792978Fbmd3_mfemoral bone mineral density 3, females only (mouse)77050288142367832Mouse
1357699Nhdlq6_mnon-HDL QTL 6 (mouse)Not determined7998886743988984Mouse
1558893Spir1_mStreptococcus pneumoniae infection resistance 1 (mouse)Not determined71030579844305936Mouse
10449139Eosn1_meosinophil differential 1 (mouse)71248087746480877Mouse
10449158Eosn3_meosinophil differential 3 (mouse)71248087746480877Mouse
4141566Femwf8_mfemur work to failure 8 (mouse)Not determined1303248547032621Mouse
11522751Cocia17_mcocaine-induced activity, QTL 17 (mouse)71313520447135204Mouse
25314314Sccor1_msynaptonemal complex length to mean MLH1 count ratio 1 (mouse)71333392547349748Mouse
1559016Drsi_mDCC-related Spp1 induction (mouse)Not determined71663729349159331Mouse
1301041Prnr2_mprion resistance 2 (mouse)Not determined71872879439674033Mouse
10412199Sst2_msusceptibility to tuberculosis 2 (mouse)Not determined718728794119485380Mouse
1301158Eae4_msusceptibility to experimental allergic encephalomyelitis 4 (mouse)Not determined719147398141919804Mouse
1301622Eae12_msusceptibility to experimental allergic encephalomyelitis 12 (mouse)Not determined71928001553280104Mouse
1301052Bhr6_mbronchial hyperresponsiveness 6 (mouse)Not determined71984225053842367Mouse
12904742Litsq2_mlitter size QTL 2 (mouse)72267388756674033Mouse
1301709Bdt4_mbone density traits 4 (mouse)Not determined72288857256888716Mouse
11354952Pdcc1_mplasmacytoid dentritic cell compartment 1 (mouse)72306653157066531Mouse
1301969Lbw5_mlupus NZB x NZW 5 (mouse)Not determined72684761560851775Mouse
7394747asp3_maudiogenic seizure prone 3 (mouse)Not determined72730579836842367Mouse
12790989Tgl6_mtriglyceride 6 (mouse)72754054961540549Mouse
4141805Sle19_msystematic lupus erythematosus susceptibility 19 (mouse)Not determined3003248581135653Mouse
26884404Huml1_mhumerus length 1, 5 week (mouse)730199425108999207Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:340
Count of miRNA genes:249
Interacting mature miRNAs:281
Transcripts:ENSMUST00000040548
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001346084 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346085 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346086 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346087 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346088 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346089 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001369262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_010758 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011250439 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011250440 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030242189 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036152725 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036152726 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC165340 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AH003393 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI893951 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK003029 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK045564 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AW457356 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC101944 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC103521 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC103522 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC103523 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY253394 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY294008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CD776457 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466593 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ054351 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M31811 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X07849 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000040548   ⟹   ENSMUSP00000041464
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl730,598,608 - 30,613,752 (-)Ensembl
GRCm38.p6 Ensembl730,899,183 - 30,914,327 (-)Ensembl
RefSeq Acc Id: ENSMUST00000186422
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl730,606,962 - 30,614,298 (-)Ensembl
GRCm38.p6 Ensembl730,907,537 - 30,914,873 (-)Ensembl
RefSeq Acc Id: ENSMUST00000187137   ⟹   ENSMUSP00000139564
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl730,598,601 - 30,614,257 (-)Ensembl
GRCm38.p6 Ensembl730,899,176 - 30,914,832 (-)Ensembl
RefSeq Acc Id: ENSMUST00000188569   ⟹   ENSMUSP00000140526
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl730,599,011 - 30,613,733 (-)Ensembl
GRCm38.p6 Ensembl730,899,586 - 30,914,308 (-)Ensembl
RefSeq Acc Id: ENSMUST00000190638   ⟹   ENSMUSP00000140578
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl730,608,608 - 30,614,290 (-)Ensembl
GRCm38.p6 Ensembl730,909,183 - 30,914,865 (-)Ensembl
RefSeq Acc Id: ENSMUST00000190950   ⟹   ENSMUSP00000139861
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl730,611,049 - 30,614,249 (-)Ensembl
GRCm38.p6 Ensembl730,911,624 - 30,914,824 (-)Ensembl
RefSeq Acc Id: ENSMUST00000191081   ⟹   ENSMUSP00000139881
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl730,598,956 - 30,613,733 (-)Ensembl
GRCm38.p6 Ensembl730,899,531 - 30,914,308 (-)Ensembl
RefSeq Acc Id: ENSMUST00000191486
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl730,611,426 - 30,614,270 (-)Ensembl
GRCm38.p6 Ensembl730,912,001 - 30,914,845 (-)Ensembl
RefSeq Acc Id: NM_001346084   ⟹   NP_001333013
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39730,598,605 - 30,614,347 (-)NCBI
GRCm38730,899,180 - 30,914,922 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001346085   ⟹   NP_001333014
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39730,598,605 - 30,614,347 (-)NCBI
GRCm38730,899,180 - 30,914,922 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001346086   ⟹   NP_001333015
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39730,598,605 - 30,614,347 (-)NCBI
GRCm38730,899,180 - 30,914,922 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001346087   ⟹   NP_001333016
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39730,598,605 - 30,614,347 (-)NCBI
GRCm38730,899,180 - 30,914,922 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001346088   ⟹   NP_001333017
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39730,598,605 - 30,614,347 (-)NCBI
GRCm38730,899,180 - 30,914,922 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001346089   ⟹   NP_001333018
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39730,598,605 - 30,613,746 (-)NCBI
GRCm38730,899,180 - 30,914,321 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001369262   ⟹   NP_001356191
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39730,598,600 - 30,614,288 (-)NCBI
GRCm38730,899,175 - 30,914,863 (-)NCBI
Sequence:
RefSeq Acc Id: NM_010758   ⟹   NP_034888
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39730,598,605 - 30,614,347 (-)NCBI
GRCm38730,899,180 - 30,914,922 (-)NCBI
MGSCv37731,684,202 - 31,699,851 (-)RGD
Celera725,483,485 - 25,499,089 (-)RGD
cM Map7 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_011250439   ⟹   XP_011248741
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39730,598,600 - 30,614,315 (-)NCBI
GRCm38730,899,175 - 30,914,900 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011250440   ⟹   XP_011248742
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39730,598,600 - 30,614,347 (-)NCBI
GRCm38730,899,175 - 30,914,921 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030242189   ⟹   XP_030098049
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39730,598,600 - 30,614,317 (-)NCBI
GRCm38730,899,175 - 30,914,900 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036152725   ⟹   XP_036008618
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39730,598,600 - 30,614,315 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036152726   ⟹   XP_036008619
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39730,598,600 - 30,614,316 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_034888   ⟸   NM_010758
- Peptide Label: isoform 3 precursor
- UniProtKB: P20917 (UniProtKB/Swiss-Prot),   Q3ZB60 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011248742   ⟸   XM_011250440
- Peptide Label: isoform X1
- UniProtKB: A0A087WPR1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011248741   ⟸   XM_011250439
- Peptide Label: isoform X1
- UniProtKB: A0A087WPR1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030098049   ⟸   XM_030242189
- Peptide Label: isoform X2
RefSeq Acc Id: NP_001356191   ⟸   NM_001369262
- Peptide Label: isoform 1 precursor
RefSeq Acc Id: NP_001333014   ⟸   NM_001346085
- Peptide Label: isoform 1 precursor
- UniProtKB: A0A087WPR1 (UniProtKB/TrEMBL),   Q3ZB60 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001333017   ⟸   NM_001346088
- Peptide Label: isoform 3 precursor
- UniProtKB: P20917 (UniProtKB/Swiss-Prot),   Q3ZB60 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001333015   ⟸   NM_001346086
- Peptide Label: isoform 3 precursor
- UniProtKB: P20917 (UniProtKB/Swiss-Prot),   Q3ZB60 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001333013   ⟸   NM_001346084
- Peptide Label: isoform 1 precursor
- UniProtKB: Q3ZB60 (UniProtKB/TrEMBL),   A0A087WPR1 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001333016   ⟸   NM_001346087
- Peptide Label: isoform 3 precursor
- UniProtKB: P20917 (UniProtKB/Swiss-Prot),   Q3ZB60 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001333018   ⟸   NM_001346089
- Peptide Label: isoform 2 precursor
- UniProtKB: Q3ZB60 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSMUSP00000041464   ⟸   ENSMUST00000040548
RefSeq Acc Id: ENSMUSP00000139881   ⟸   ENSMUST00000191081
RefSeq Acc Id: ENSMUSP00000140578   ⟸   ENSMUST00000190638
RefSeq Acc Id: ENSMUSP00000139861   ⟸   ENSMUST00000190950
RefSeq Acc Id: ENSMUSP00000140526   ⟸   ENSMUST00000188569
RefSeq Acc Id: ENSMUSP00000139564   ⟸   ENSMUST00000187137
RefSeq Acc Id: XP_036008619   ⟸   XM_036152726
- Peptide Label: isoform X1
RefSeq Acc Id: XP_036008618   ⟸   XM_036152725
- Peptide Label: isoform X1
Protein Domains
Ig-like   Ig-like C2-type   Ig-like V-type

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P20917-F1-model_v2 AlphaFold P20917 1-627 view protein structure

Promoters
RGD ID:8663533
Promoter ID:EPDNEW_M9798
Type:multiple initiation site
Name:Mag_1
Description:Mus musculus myelin-associated glycoprotein , transcript variant2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38730,914,862 - 30,914,922EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:96912 AgrOrtholog
Ensembl Genes ENSMUSG00000036634 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000041464 UniProtKB/Swiss-Prot
  ENSMUSP00000139564 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000139861.2 UniProtKB/TrEMBL
  ENSMUSP00000139881 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000140526 ENTREZGENE
  ENSMUSP00000140526.2 UniProtKB/TrEMBL
  ENSMUSP00000140578.2 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000040548 UniProtKB/Swiss-Prot
  ENSMUST00000187137 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000188569 ENTREZGENE
  ENSMUST00000188569.7 UniProtKB/TrEMBL
  ENSMUST00000190638.7 UniProtKB/TrEMBL
  ENSMUST00000190950.7 UniProtKB/TrEMBL
  ENSMUST00000191081 ENTREZGENE, UniProtKB/Swiss-Prot
Gene3D-CATH 2.60.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro CD80_C2-set UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig_sub UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig_sub2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:17136 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:96912 ENTREZGENE
NCBI Gene 17136 ENTREZGENE
Pfam C2-set_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Mag PhenoGen
PROSITE IG_LIKE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART IGc2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SM00409 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF48726 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A087WPP5_MOUSE UniProtKB/TrEMBL
  A0A087WPR1 ENTREZGENE
  A0A087WRD6_MOUSE UniProtKB/TrEMBL
  MAG_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q3T1F6_MOUSE UniProtKB/TrEMBL
  Q3ZB60 ENTREZGENE, UniProtKB/TrEMBL
  Q3ZB61_MOUSE UniProtKB/TrEMBL
  Q3ZB62_MOUSE UniProtKB/TrEMBL
  Q6LBU4_MOUSE UniProtKB/TrEMBL
  Q9CW70_MOUSE UniProtKB/TrEMBL
UniProt Secondary A0A087WPR1 UniProtKB/Swiss-Prot
  P16880 UniProtKB/Swiss-Prot