Symbol:
Atrx
Name:
ATRX, chromatin remodeler
RGD ID:
1553098
MGI Page
MGI
Description:
Enables chromatin binding activity and histone binding activity. Involved in several processes, including DNA damage response, signal transduction by p53 class mediator; cellular response to hydroxyurea; and positive regulation of DNA metabolic process. Acts upstream of or within several processes, including male gonad development; positive regulation of transcription by RNA polymerase II; and post-embryonic forelimb morphogenesis. Located in PML body and chromosome. Colocalizes with chromosome, telomeric region. Is expressed in several structures, including alimentary system; early embryo; egg cylinder; genitourinary system; and nervous system. Used to study alpha thalassemia-X-linked intellectual disability syndrome. Human ortholog(s) of this gene implicated in X-linked mental retardation-hypotonic facies syndrome-1; alpha thalassemia-X-linked intellectual disability syndrome; alpha-thalassemia myelodysplasia syndrome; high grade glioma; and lung small cell carcinoma. Orthologous to human ATRX (ATRX chromatin remodeler).
Type:
protein-coding
RefSeq Status:
VALIDATED
Previously known as:
4833408C14Rik; AI447451; alpha thalassemia/mental retardation syndrome (X-linked); alpha thalassemia/mental retardation syndrome X-linked; alpha thalassemia/mental retardation syndrome X-linked homolog; ATP-dependent helicase ATRX; ATR2; DXHXS6677; DXHXS6677E; heterochromatin protein 2; HP1 alpha-interacting protein; HP1-BP; HP1-BP38; Hp1b; Hp1bp2; Hp1bp38; MRXS3; Rad; Rad54; RAD54L; RIKEN cDNA 4833408C14 gene; transcriptional regulator ATRX; X; X-linked nuclear protein; XH2; Xnp; ZNF-HX
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Species
Gene symbol and name
Data Source
Assertion derived from
less info ...
Orthologs 1
Homo sapiens (human):
ATRX (ATRX chromatin remodeler) HGNC
EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Rattus norvegicus (Norway rat):
Atrx (ATRX, chromatin remodeler) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):
Atrx (ATRX chromatin remodeler) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):
ATRX (ATRX chromatin remodeler) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Canis lupus familiaris (dog):
ATRX (ATRX chromatin remodeler) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):
Atrx (ATRX chromatin remodeler) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Sus scrofa (pig):
ATRX (ATRX chromatin remodeler) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):
ATRX (ATRX chromatin remodeler) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Alliance orthologs 3
Rattus norvegicus (Norway rat):
Atrx (ATRX, chromatin remodeler)
Alliance
DIOPT (OrthoInspector|PhylomeDB|SonicParanoid)
Homo sapiens (human):
ATRX (ATRX chromatin remodeler)
Alliance
DIOPT (Ensembl Compara|HGNC|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Danio rerio (zebrafish):
atrx (ATRX chromatin remodeler)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid|ZFIN)
Drosophila melanogaster (fruit fly):
XNP
Alliance
DIOPT (Ensembl Compara|Hieranoid|OrthoFinder|OrthoInspector|PhylomeDB|SonicParanoid)
Caenorhabditis elegans (roundworm):
xnp-1
Alliance
DIOPT (Ensembl Compara|Hieranoid|OrthoFinder|OrthoInspector|PhylomeDB|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):
ULS1
Alliance
DIOPT (Ensembl Compara|InParanoid)
Xenopus tropicalis (tropical clawed frog):
atrx
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Related Pseudogenes:
Gm19194
Latest Assembly:
GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 X 104,841,221 - 104,972,978 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl X 104,841,221 - 104,973,009 (-) Ensembl GRCm39 Ensembl GRCm38 X 105,797,615 - 105,929,372 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl X 105,797,615 - 105,929,403 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 X 102,992,954 - 103,124,711 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 X 102,002,872 - 102,132,061 (-) NCBI MGSCv36 mm8 Celera X 92,651,743 - 92,783,324 (-) NCBI Celera Cytogenetic Map X D NCBI cM Map X 47.26 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Only show annotations with direct experimental evidence (0 objects hidden)
Atrx Mouse (+)-dexrazoxane multiple interactions EXP 6480464 [Dexrazoxane co-treated with Idarubicin] results in increased expression of ATRX protein and Dexrazoxane inhibits the reaction [Idarubicin results in decreased expression of ATRX mRNA] CTD PMID:28973540 Atrx Mouse (+)-pilocarpine increases expression ISO Atrx (Rattus norvegicus) 6480464 Pilocarpine results in increased expression of ATRX mRNA CTD PMID:17971868 Atrx Mouse (S)-nicotine increases expression ISO ATRX (Homo sapiens) 6480464 Nicotine results in increased expression of ATRX mRNA CTD PMID:16949557 Atrx Mouse (S)-nicotine decreases expression EXP 6480464 Nicotine results in decreased expression of ATRX mRNA CTD PMID:21955143 Atrx Mouse 1,2-dichloroethane decreases expression EXP 6480464 ethylene dichloride results in decreased expression of ATRX mRNA CTD PMID:28960355 Atrx Mouse 1,2-dimethylhydrazine increases expression EXP 6480464 1 and 2-Dimethylhydrazine results in increased expression of ATRX mRNA CTD PMID:22206623 Atrx Mouse 1-[(4-chlorophenyl)-phenylmethyl]-4-methylpiperazine decreases expression ISO Atrx (Rattus norvegicus) 6480464 chlorcyclizine results in decreased expression of ATRX mRNA CTD PMID:21058326 Atrx Mouse 17beta-estradiol decreases expression ISO Atrx (Rattus norvegicus) 6480464 Estradiol results in decreased expression of ATRX mRNA CTD PMID:20068009 Atrx Mouse 17beta-estradiol increases expression ISO ATRX (Homo sapiens) 6480464 Estradiol results in increased expression of ATRX mRNA CTD PMID:36581016 Atrx Mouse 2,3',4,4',5-Pentachlorobiphenyl increases expression EXP 6480464 2 more ... CTD PMID:31388691 Atrx Mouse 2,3,4,7,8-Pentachlorodibenzofuran decreases expression ISO Atrx (Rattus norvegicus) 6480464 2 more ... CTD PMID:21724226 Atrx Mouse 2,3,7,8-tetrachlorodibenzodioxine affects expression EXP 6480464 Tetrachlorodibenzodioxin affects the expression of ATRX mRNA CTD PMID:21570461 Atrx Mouse 2,3,7,8-tetrachlorodibenzodioxine affects expression ISO Atrx (Rattus norvegicus) 6480464 Tetrachlorodibenzodioxin affects the expression of ATRX mRNA CTD PMID:34747641 Atrx Mouse 2,3,7,8-tetrachlorodibenzodioxine decreases expression ISO Atrx (Rattus norvegicus) 6480464 Tetrachlorodibenzodioxin results in decreased expression of ATRX mRNA CTD PMID:32109520 Atrx Mouse 2,3,7,8-tetrachlorodibenzodioxine decreases expression EXP 6480464 Tetrachlorodibenzodioxin results in decreased expression of ATRX mRNA CTD PMID:15034205 Atrx Mouse 2,3,7,8-Tetrachlorodibenzofuran decreases expression ISO Atrx (Rattus norvegicus) 6480464 2 more ... CTD PMID:32109520 Atrx Mouse 2,6-dinitrotoluene affects expression ISO Atrx (Rattus norvegicus) 6480464 2 and 6-dinitrotoluene affects the expression of ATRX mRNA CTD PMID:21346803 Atrx Mouse 2-butoxyethanol decreases expression EXP 6480464 n-butoxyethanol results in decreased expression of ATRX mRNA CTD PMID:19812364 Atrx Mouse 3,4-methylenedioxymethamphetamine decreases expression EXP 6480464 N-Methyl-3 and 4-methylenedioxyamphetamine results in decreased expression of ATRX mRNA CTD PMID:26251327 Atrx Mouse 4-vinylcyclohexene dioxide affects expression EXP 6480464 4-vinyl-1-cyclohexene dioxide affects the expression of ATRX mRNA CTD PMID:20829426 Atrx Mouse acrolein multiple interactions ISO ATRX (Homo sapiens) 6480464 [Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone] results in decreased expression of ATRX mRNA and [Air Pollutants results in increased abundance of [Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone]] which results in decreased expression of ATRX mRNA CTD PMID:32699268 Atrx Mouse acrylamide decreases expression ISO Atrx (Rattus norvegicus) 6480464 Acrylamide results in decreased expression of ATRX mRNA CTD PMID:28959563 Atrx Mouse aflatoxin B1 increases expression EXP 6480464 Aflatoxin B1 results in increased expression of ATRX mRNA CTD PMID:19770486 Atrx Mouse aflatoxin B1 decreases methylation ISO ATRX (Homo sapiens) 6480464 Aflatoxin B1 results in decreased methylation of ATRX intron CTD PMID:30157460 Atrx Mouse Aflatoxin B2 alpha increases methylation ISO ATRX (Homo sapiens) 6480464 aflatoxin B2 results in increased methylation of ATRX intron CTD PMID:30157460 Atrx Mouse all-trans-retinoic acid decreases expression ISO ATRX (Homo sapiens) 6480464 Tretinoin results in decreased expression of ATRX mRNA CTD PMID:15498508 Atrx Mouse all-trans-retinoic acid increases expression ISO ATRX (Homo sapiens) 6480464 Tretinoin results in increased expression of ATRX mRNA CTD PMID:23724009 Atrx Mouse alpha-pinene multiple interactions ISO ATRX (Homo sapiens) 6480464 [Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone] results in decreased expression of ATRX mRNA and [Air Pollutants results in increased abundance of [Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone]] which results in decreased expression of ATRX mRNA CTD PMID:32699268 Atrx Mouse ammonium chloride increases expression ISO Atrx (Rattus norvegicus) 6480464 Ammonium Chloride results in increased expression of ATRX mRNA CTD PMID:12420312 Atrx Mouse ammonium chloride affects expression ISO Atrx (Rattus norvegicus) 6480464 Ammonium Chloride affects the expression of ATRX mRNA CTD PMID:16483693 Atrx Mouse antimycin A increases expression ISO ATRX (Homo sapiens) 6480464 Antimycin A results in increased expression of ATRX mRNA CTD PMID:33512557 Atrx Mouse antirheumatic drug increases expression ISO ATRX (Homo sapiens) 6480464 Antirheumatic Agents results in increased expression of ATRX mRNA CTD PMID:24449571 Atrx Mouse aristolochic acid A decreases expression ISO ATRX (Homo sapiens) 6480464 aristolochic acid I results in decreased expression of ATRX mRNA CTD PMID:33212167 Atrx Mouse benzene decreases expression EXP 6480464 Benzene results in decreased expression of ATRX mRNA CTD PMID:20018183 Atrx Mouse benzo[a]pyrene decreases expression EXP 6480464 Benzo(a)pyrene results in decreased expression of ATRX mRNA CTD PMID:15034205 and PMID:19770486 Atrx Mouse benzo[a]pyrene affects methylation ISO ATRX (Homo sapiens) 6480464 Benzo(a)pyrene affects the methylation of ATRX intron and Benzo(a)pyrene affects the methylation of ATRX promoter CTD PMID:27901495 and PMID:30157460 Atrx Mouse benzo[a]pyrene increases methylation ISO ATRX (Homo sapiens) 6480464 Benzo(a)pyrene results in increased methylation of ATRX exon CTD PMID:27901495 Atrx Mouse benzo[a]pyrene diol epoxide I decreases expression ISO ATRX (Homo sapiens) 6480464 7 more ... CTD PMID:20018196 Atrx Mouse bis(2-ethylhexyl) phthalate decreases expression EXP 6480464 Diethylhexyl Phthalate results in decreased expression of ATRX mRNA CTD PMID:33754040 Atrx Mouse bisphenol A decreases expression ISO Atrx (Rattus norvegicus) 6480464 bisphenol A results in decreased expression of ATRX mRNA CTD PMID:25181051 Atrx Mouse bisphenol A multiple interactions ISO ATRX (Homo sapiens) 6480464 [bisphenol A co-treated with Fulvestrant] results in increased methylation of ATRX gene CTD PMID:31601247 Atrx Mouse bisphenol A affects methylation ISO ATRX (Homo sapiens) 6480464 bisphenol A affects the methylation of ATRX gene CTD PMID:31601247 Atrx Mouse bisphenol A decreases expression EXP 6480464 bisphenol A results in decreased expression of ATRX mRNA CTD PMID:33221593 Atrx Mouse bisphenol A increases expression ISO ATRX (Homo sapiens) 6480464 bisphenol A results in increased expression of ATRX mRNA CTD PMID:29275510 Atrx Mouse Brevetoxin B decreases expression ISO ATRX (Homo sapiens) 6480464 brevetoxin 2 results in decreased expression of ATRX mRNA CTD PMID:20498034 Atrx Mouse Brodifacoum increases expression ISO Atrx (Rattus norvegicus) 6480464 bromfenacoum results in increased expression of ATRX protein CTD PMID:28903499 Atrx Mouse butanal decreases expression ISO ATRX (Homo sapiens) 6480464 butyraldehyde results in decreased expression of ATRX mRNA CTD PMID:26079696 Atrx Mouse caffeine affects phosphorylation ISO ATRX (Homo sapiens) 6480464 Caffeine affects the phosphorylation of ATRX protein CTD PMID:35688186 Atrx Mouse carbon nanotube decreases expression EXP 6480464 Nanotubes more ... CTD PMID:25554681 Atrx Mouse chloroprene increases expression ISO Atrx (Rattus norvegicus) 6480464 Chloroprene results in increased expression of ATRX mRNA CTD PMID:23125180 Atrx Mouse clobetasol decreases expression EXP 6480464 Clobetasol results in decreased expression of ATRX mRNA CTD PMID:27462272 Atrx Mouse clorgyline increases expression ISO ATRX (Homo sapiens) 6480464 Clorgyline results in increased expression of ATRX mRNA CTD PMID:19691856 Atrx Mouse cobalt dichloride decreases expression ISO Atrx (Rattus norvegicus) 6480464 cobaltous chloride results in decreased expression of ATRX mRNA CTD PMID:24386269 Atrx Mouse cocaine increases expression ISO Atrx (Rattus norvegicus) 6480464 Cocaine results in increased expression of ATRX mRNA CTD PMID:17898221 Atrx Mouse coumarin affects phosphorylation ISO ATRX (Homo sapiens) 6480464 coumarin affects the phosphorylation of ATRX protein CTD PMID:35688186 Atrx Mouse CU-O LINKAGE decreases expression ISO ATRX (Homo sapiens) 6480464 cupric oxide results in decreased expression of ATRX mRNA CTD PMID:22077320 Atrx Mouse cyclosporin A decreases expression EXP 6480464 Cyclosporine results in decreased expression of ATRX mRNA CTD PMID:19770486 Atrx Mouse cyclosporin A decreases expression ISO ATRX (Homo sapiens) 6480464 Cyclosporine results in decreased expression of ATRX mRNA CTD PMID:25562108 and PMID:27989131 Atrx Mouse cypermethrin increases expression EXP 6480464 cypermethrin results in increased expression of ATRX mRNA CTD PMID:21142847 Atrx Mouse deoxynivalenol affects phosphorylation EXP 6480464 deoxynivalenol affects the phosphorylation of ATRX protein CTD PMID:23811945 Atrx Mouse diazinon increases expression ISO Atrx (Rattus norvegicus) 6480464 Diazinon results in increased expression of ATRX mRNA CTD PMID:29108742 Atrx Mouse diazinon increases methylation ISO ATRX (Homo sapiens) 6480464 Diazinon results in increased methylation of ATRX gene CTD PMID:22964155 Atrx Mouse Dibutyl phosphate affects expression ISO ATRX (Homo sapiens) 6480464 di-n-butylphosphoric acid affects the expression of ATRX mRNA CTD PMID:37042841 Atrx Mouse diquat increases expression EXP 6480464 Diquat results in increased expression of ATRX protein CTD PMID:36851058 Atrx Mouse diuron decreases expression ISO Atrx (Rattus norvegicus) 6480464 Diuron results in decreased expression of ATRX mRNA CTD PMID:25152437 Atrx Mouse dorsomorphin multiple interactions ISO ATRX (Homo sapiens) 6480464 [NOG protein co-treated with trichostatin A co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of ATRX mRNA CTD PMID:27188386 Atrx Mouse doxorubicin increases expression ISO Atrx (Rattus norvegicus) 6480464 Doxorubicin results in increased expression of ATRX mRNA CTD PMID:27181935 Atrx Mouse doxorubicin multiple interactions ISO ATRX (Homo sapiens) 6480464 [TP53 protein affects the susceptibility to Doxorubicin] which affects the expression of ATRX mRNA more ... CTD PMID:36634904 and PMID:38367682 Atrx Mouse doxorubicin increases expression ISO ATRX (Homo sapiens) 6480464 Doxorubicin results in increased expression of ATRX mRNA CTD PMID:36634904 Atrx Mouse doxorubicin decreases expression ISO ATRX (Homo sapiens) 6480464 Doxorubicin results in decreased expression of ATRX mRNA CTD PMID:29803840 Atrx Mouse doxorubicin multiple interactions ISO Atrx (Rattus norvegicus) 6480464 Fungal Polysaccharides inhibits the reaction [Doxorubicin results in increased expression of ATRX mRNA] CTD PMID:27181935 Atrx Mouse elemental selenium multiple interactions ISO ATRX (Homo sapiens) 6480464 [Selenium co-treated with Vitamin E] results in decreased expression of ATRX mRNA CTD PMID:19244175 Atrx Mouse elemental selenium decreases expression ISO ATRX (Homo sapiens) 6480464 Selenium results in decreased expression of ATRX mRNA CTD PMID:19244175 Atrx Mouse Enterolactone decreases expression ISO ATRX (Homo sapiens) 6480464 2 and 3-bis(3'-hydroxybenzyl)butyrolactone results in decreased expression of ATRX mRNA CTD PMID:19167446 Atrx Mouse ethanol decreases expression EXP 6480464 Ethanol results in decreased expression of ATRX mRNA CTD PMID:21955143 Atrx Mouse ethanol affects splicing EXP 6480464 Ethanol affects the splicing of ATRX mRNA CTD PMID:30319688 Atrx Mouse ethanol decreases expression ISO ATRX (Homo sapiens) 6480464 Ethanol results in decreased expression of ATRX mRNA CTD PMID:28986285 Atrx Mouse flutamide decreases expression ISO Atrx (Rattus norvegicus) 6480464 Flutamide results in decreased expression of ATRX mRNA CTD PMID:24793618 Atrx Mouse folic acid decreases expression EXP 6480464 Folic Acid results in decreased expression of ATRX mRNA CTD PMID:25629700 Atrx Mouse fonofos increases methylation ISO ATRX (Homo sapiens) 6480464 Fonofos results in increased methylation of ATRX promoter CTD PMID:22847954 Atrx Mouse formaldehyde increases expression ISO Atrx (Rattus norvegicus) 6480464 Formaldehyde results in increased expression of ATRX mRNA CTD PMID:18499655 Atrx Mouse FR900359 affects phosphorylation ISO ATRX (Homo sapiens) 6480464 FR900359 affects the phosphorylation of ATRX protein CTD PMID:37730182 Atrx Mouse fulvestrant multiple interactions ISO ATRX (Homo sapiens) 6480464 [bisphenol A co-treated with Fulvestrant] results in increased methylation of ATRX gene CTD PMID:31601247 Atrx Mouse geldanamycin increases expression ISO ATRX (Homo sapiens) 6480464 geldanamycin results in increased expression of ATRX mRNA CTD PMID:26705709 Atrx Mouse gentamycin increases expression ISO Atrx (Rattus norvegicus) 6480464 Gentamicins results in increased expression of ATRX mRNA CTD PMID:22061828 Atrx Mouse hydrogen peroxide multiple interactions ISO ATRX (Homo sapiens) 6480464 [Hydrogen Peroxide co-treated with Theophylline] results in increased expression of ATRX protein CTD PMID:18951874 Atrx Mouse hydrogen peroxide multiple interactions EXP 6480464 N-(oxo-5 more ... CTD PMID:31494107 Atrx Mouse hydrogen peroxide increases expression ISO ATRX (Homo sapiens) 6480464 Hydrogen Peroxide results in increased expression of ATRX mRNA CTD PMID:18951874 Atrx Mouse idarubicin multiple interactions EXP 6480464 [Dexrazoxane co-treated with Idarubicin] results in increased expression of ATRX protein and Dexrazoxane inhibits the reaction [Idarubicin results in decreased expression of ATRX mRNA] CTD PMID:28973540 Atrx Mouse idarubicin decreases expression EXP 6480464 Idarubicin results in decreased expression of ATRX mRNA CTD PMID:28973540 Atrx Mouse irinotecan decreases expression ISO ATRX (Homo sapiens) 6480464 Irinotecan analog results in decreased expression of ATRX mRNA CTD PMID:18927307 Atrx Mouse ivermectin decreases expression ISO ATRX (Homo sapiens) 6480464 Ivermectin results in decreased expression of ATRX protein CTD PMID:32959892 Atrx Mouse josamycin affects response to substance ISO ATRX (Homo sapiens) 6480464 ATRX protein affects the susceptibility to Josamycin CTD PMID:31915244 Atrx Mouse menadione affects expression EXP 6480464 Vitamin K 3 affects the expression of ATRX mRNA CTD PMID:20829426 Atrx Mouse methoxychlor affects expression EXP 6480464 Methoxychlor affects the expression of ATRX mRNA CTD PMID:20829426 Atrx Mouse methylparaben increases expression ISO ATRX (Homo sapiens) 6480464 methylparaben results in increased expression of ATRX mRNA CTD PMID:31745603 Atrx Mouse miconazole decreases expression EXP 6480464 Miconazole results in decreased expression of ATRX mRNA CTD PMID:27462272 Atrx Mouse mitomycin C affects response to substance ISO ATRX (Homo sapiens) 6480464 ATRX protein affects the susceptibility to Mitomycin CTD PMID:16217747 Atrx Mouse morphine increases expression EXP 6480464 Morphine results in increased expression of ATRX mRNA CTD PMID:21955143 Atrx Mouse N-ethyl-N-nitrosourea increases mutagenesis ISO Atrx (Rattus norvegicus) 6480464 Ethylnitrosourea results in increased mutagenesis of ATRX gene CTD PMID:16495775 Atrx Mouse naphthalene increases expression ISO Atrx (Rattus norvegicus) 6480464 naphthalene analog results in increased expression of ATRX mRNA CTD PMID:24976557 Atrx Mouse nicotine increases expression ISO ATRX (Homo sapiens) 6480464 Nicotine results in increased expression of ATRX mRNA CTD PMID:16949557 Atrx Mouse nicotine decreases expression EXP 6480464 Nicotine results in decreased expression of ATRX mRNA CTD PMID:21955143 Atrx Mouse oxaliplatin multiple interactions ISO Atrx (Rattus norvegicus) 6480464 [oxaliplatin co-treated with Topotecan] results in decreased expression of ATRX mRNA CTD PMID:25729387 Atrx Mouse ozone multiple interactions ISO ATRX (Homo sapiens) 6480464 [Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone] results in decreased expression of ATRX mRNA more ... CTD PMID:32699268 Atrx Mouse paracetamol decreases expression ISO ATRX (Homo sapiens) 6480464 Acetaminophen results in decreased expression of ATRX mRNA CTD PMID:21420995 Atrx Mouse parathion increases methylation ISO ATRX (Homo sapiens) 6480464 Parathion results in increased methylation of ATRX promoter CTD PMID:22847954 Atrx Mouse perfluorooctane-1-sulfonic acid decreases expression ISO ATRX (Homo sapiens) 6480464 perfluorooctane sulfonic acid results in decreased expression of ATRX mRNA CTD PMID:27153767 Atrx Mouse phenethyl isothiocyanate decreases expression ISO Atrx (Rattus norvegicus) 6480464 phenethyl isothiocyanate results in decreased expression of ATRX mRNA CTD PMID:17616710 Atrx Mouse phenobarbital decreases expression EXP 6480464 Phenobarbital results in decreased expression of ATRX mRNA CTD PMID:23091169 Atrx Mouse potassium chromate decreases expression ISO ATRX (Homo sapiens) 6480464 potassium chromate(VI) results in decreased expression of ATRX mRNA CTD PMID:22714537 Atrx Mouse propiconazole decreases expression EXP 6480464 propiconazole results in decreased expression of ATRX mRNA CTD PMID:21278054 Atrx Mouse resveratrol decreases expression ISO Atrx (Rattus norvegicus) 6480464 Resveratrol results in decreased expression of ATRX mRNA CTD PMID:25905778 and PMID:33775663 Atrx Mouse resveratrol multiple interactions ISO ATRX (Homo sapiens) 6480464 [Plant Extracts co-treated with Resveratrol] results in increased expression of ATRX mRNA CTD PMID:23557933 Atrx Mouse resveratrol decreases expression ISO ATRX (Homo sapiens) 6480464 resveratrol results in decreased expression of ATRX mRNA CTD PMID:25888808 Atrx Mouse rifampicin increases expression ISO ATRX (Homo sapiens) 6480464 Rifampin results in increased expression of ATRX mRNA CTD PMID:24552687 Atrx Mouse rotenone decreases expression ISO ATRX (Homo sapiens) 6480464 Rotenone results in decreased expression of ATRX mRNA CTD PMID:33512557 Atrx Mouse SB 431542 multiple interactions ISO ATRX (Homo sapiens) 6480464 [NOG protein co-treated with trichostatin A co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of ATRX mRNA CTD PMID:27188386 Atrx Mouse selenium atom multiple interactions ISO ATRX (Homo sapiens) 6480464 [Selenium co-treated with Vitamin E] results in decreased expression of ATRX mRNA CTD PMID:19244175 Atrx Mouse selenium atom decreases expression ISO ATRX (Homo sapiens) 6480464 Selenium results in decreased expression of ATRX mRNA CTD PMID:19244175 Atrx Mouse silicon dioxide increases expression EXP 6480464 Silicon Dioxide results in increased expression of ATRX mRNA CTD PMID:19073995 Atrx Mouse sodium arsenite multiple interactions ISO ATRX (Homo sapiens) 6480464 sodium arsenite promotes the reaction [ATRX protein binds to CAPRIN1 protein] CTD PMID:33939924 Atrx Mouse sodium dichromate decreases expression ISO Atrx (Rattus norvegicus) 6480464 sodium bichromate results in decreased expression of ATRX mRNA CTD PMID:22561333 Atrx Mouse succimer multiple interactions EXP 6480464 [Succimer binds to Magnetite Nanoparticles] which results in decreased expression of ATRX mRNA and [Succimer co-treated with Magnetite Nanoparticles] affects the expression of ATRX mRNA CTD PMID:21641980 and PMID:26378955 Atrx Mouse succimer multiple interactions ISO ATRX (Homo sapiens) 6480464 [Succimer co-treated with Magnetite Nanoparticles] results in increased expression of ATRX mRNA CTD PMID:26378955 Atrx Mouse sunitinib decreases expression ISO ATRX (Homo sapiens) 6480464 Sunitinib results in decreased expression of ATRX mRNA CTD PMID:31533062 Atrx Mouse tamibarotene decreases expression ISO ATRX (Homo sapiens) 6480464 tamibarotene results in decreased expression of ATRX mRNA CTD PMID:15498508 Atrx Mouse terbufos increases methylation ISO ATRX (Homo sapiens) 6480464 terbufos results in increased methylation of ATRX promoter CTD PMID:22847954 Atrx Mouse testosterone enanthate increases expression ISO ATRX (Homo sapiens) 6480464 testosterone enanthate results in increased expression of ATRX mRNA CTD PMID:17440010 Atrx Mouse tetrachloromethane affects expression EXP 6480464 Carbon Tetrachloride affects the expression of ATRX mRNA CTD PMID:17484886 Atrx Mouse thapsigargin increases expression EXP 6480464 Thapsigargin results in increased expression of ATRX protein CTD PMID:24648495 Atrx Mouse theophylline multiple interactions ISO ATRX (Homo sapiens) 6480464 [Hydrogen Peroxide co-treated with Theophylline] results in increased expression of ATRX protein CTD PMID:18951874 Atrx Mouse thimerosal decreases expression ISO ATRX (Homo sapiens) 6480464 Thimerosal results in decreased expression of ATRX mRNA CTD PMID:27188386 Atrx Mouse titanium dioxide decreases methylation EXP 6480464 titanium dioxide results in decreased methylation of ATRX gene CTD PMID:35295148 Atrx Mouse topotecan multiple interactions ISO Atrx (Rattus norvegicus) 6480464 [oxaliplatin co-treated with Topotecan] results in decreased expression of ATRX mRNA CTD PMID:25729387 Atrx Mouse topotecan decreases expression ISO Atrx (Rattus norvegicus) 6480464 Topotecan results in decreased expression of ATRX mRNA CTD PMID:25729387 Atrx Mouse torcetrapib increases expression ISO ATRX (Homo sapiens) 6480464 torcetrapib results in increased expression of ATRX mRNA CTD PMID:23228038 Atrx Mouse trichostatin A decreases expression ISO ATRX (Homo sapiens) 6480464 trichostatin A results in decreased expression of ATRX mRNA CTD PMID:24935251 and PMID:26272509 Atrx Mouse trichostatin A multiple interactions ISO ATRX (Homo sapiens) 6480464 [NOG protein co-treated with trichostatin A co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of ATRX mRNA CTD PMID:27188386 Atrx Mouse triphenyl phosphate affects expression ISO ATRX (Homo sapiens) 6480464 triphenyl phosphate affects the expression of ATRX mRNA CTD PMID:37042841 Atrx Mouse triptonide increases expression EXP 6480464 triptonide results in increased expression of ATRX mRNA CTD PMID:33045310 Atrx Mouse troglitazone decreases expression EXP 6480464 troglitazone results in decreased expression of ATRX mRNA CTD PMID:28973697 Atrx Mouse tungsten decreases expression EXP 6480464 Tungsten results in decreased expression of ATRX mRNA CTD PMID:30912803 Atrx Mouse valproic acid decreases expression EXP 6480464 Valproic Acid analog results in decreased expression of ATRX mRNA and Valproic Acid results in decreased expression of ATRX mRNA CTD PMID:21427059 Atrx Mouse valproic acid affects splicing ISO Atrx (Rattus norvegicus) 6480464 Valproic Acid affects the splicing of ATRX mRNA CTD PMID:29427782 Atrx Mouse valproic acid decreases expression ISO ATRX (Homo sapiens) 6480464 Valproic Acid results in decreased expression of ATRX mRNA CTD PMID:23179753 more ... Atrx Mouse venlafaxine hydrochloride increases expression ISO Atrx (Rattus norvegicus) 6480464 Venlafaxine Hydrochloride results in increased expression of ATRX mRNA CTD PMID:25423262 Atrx Mouse vinclozolin affects expression ISO Atrx (Rattus norvegicus) 6480464 vinclozolin affects the expression of ATRX mRNA CTD PMID:19015723 Atrx Mouse vinclozolin increases methylation ISO Atrx (Rattus norvegicus) 6480464 vinclozolin results in increased methylation of ATRX gene CTD PMID:31682807 Atrx Mouse vinclozolin increases expression ISO Atrx (Rattus norvegicus) 6480464 vinclozolin results in increased expression of ATRX mRNA CTD PMID:23034163 Atrx Mouse vitamin E multiple interactions ISO ATRX (Homo sapiens) 6480464 [Selenium co-treated with Vitamin E] results in decreased expression of ATRX mRNA CTD PMID:19244175 Atrx Mouse vitamin E decreases expression ISO ATRX (Homo sapiens) 6480464 Vitamin E results in decreased expression of ATRX mRNA CTD PMID:19244175 Atrx Mouse vorinostat decreases expression ISO ATRX (Homo sapiens) 6480464 vorinostat results in decreased expression of ATRX mRNA CTD PMID:27188386 Atrx Mouse zoledronic acid decreases expression ISO ATRX (Homo sapiens) 6480464 zoledronic acid results in decreased expression of ATRX mRNA CTD PMID:20977926
(+)-dexrazoxane (EXP) (+)-pilocarpine (ISO) (S)-nicotine (EXP,ISO) 1,2-dichloroethane (EXP) 1,2-dimethylhydrazine (EXP) 1-[(4-chlorophenyl)-phenylmethyl]-4-methylpiperazine (ISO) 17beta-estradiol (ISO) 2,3',4,4',5-Pentachlorobiphenyl (EXP) 2,3,4,7,8-Pentachlorodibenzofuran (ISO) 2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO) 2,3,7,8-Tetrachlorodibenzofuran (ISO) 2,6-dinitrotoluene (ISO) 2-butoxyethanol (EXP) 3,4-methylenedioxymethamphetamine (EXP) 4-vinylcyclohexene dioxide (EXP) acrolein (ISO) acrylamide (ISO) aflatoxin B1 (EXP,ISO) Aflatoxin B2 alpha (ISO) all-trans-retinoic acid (ISO) alpha-pinene (ISO) ammonium chloride (ISO) antimycin A (ISO) antirheumatic drug (ISO) aristolochic acid A (ISO) benzene (EXP) benzo[a]pyrene (EXP,ISO) benzo[a]pyrene diol epoxide I (ISO) bis(2-ethylhexyl) phthalate (EXP) bisphenol A (EXP,ISO) Brevetoxin B (ISO) Brodifacoum (ISO) butanal (ISO) caffeine (ISO) carbon nanotube (EXP) chloroprene (ISO) clobetasol (EXP) clorgyline (ISO) cobalt dichloride (ISO) cocaine (ISO) coumarin (ISO) CU-O LINKAGE (ISO) cyclosporin A (EXP,ISO) cypermethrin (EXP) deoxynivalenol (EXP) diazinon (ISO) Dibutyl phosphate (ISO) diquat (EXP) diuron (ISO) dorsomorphin (ISO) doxorubicin (ISO) elemental selenium (ISO) Enterolactone (ISO) ethanol (EXP,ISO) flutamide (ISO) folic acid (EXP) fonofos (ISO) formaldehyde (ISO) FR900359 (ISO) fulvestrant (ISO) geldanamycin (ISO) gentamycin (ISO) hydrogen peroxide (EXP,ISO) idarubicin (EXP) irinotecan (ISO) ivermectin (ISO) josamycin (ISO) menadione (EXP) methoxychlor (EXP) methylparaben (ISO) miconazole (EXP) mitomycin C (ISO) morphine (EXP) N-ethyl-N-nitrosourea (ISO) naphthalene (ISO) nicotine (EXP,ISO) oxaliplatin (ISO) ozone (ISO) paracetamol (ISO) parathion (ISO) perfluorooctane-1-sulfonic acid (ISO) phenethyl isothiocyanate (ISO) phenobarbital (EXP) potassium chromate (ISO) propiconazole (EXP) resveratrol (ISO) rifampicin (ISO) rotenone (ISO) SB 431542 (ISO) selenium atom (ISO) silicon dioxide (EXP) sodium arsenite (ISO) sodium dichromate (ISO) succimer (EXP,ISO) sunitinib (ISO) tamibarotene (ISO) terbufos (ISO) testosterone enanthate (ISO) tetrachloromethane (EXP) thapsigargin (EXP) theophylline (ISO) thimerosal (ISO) titanium dioxide (EXP) topotecan (ISO) torcetrapib (ISO) trichostatin A (ISO) triphenyl phosphate (ISO) triptonide (EXP) troglitazone (EXP) tungsten (EXP) valproic acid (EXP,ISO) venlafaxine hydrochloride (ISO) vinclozolin (ISO) vitamin E (ISO) vorinostat (ISO) zoledronic acid (ISO)
Biological Process
cellular response to hydroxyurea (IMP) chromatin organization (ISO,ISS) chromatin remodeling (IBA,ISO,ISS) chromosome organization involved in meiotic cell cycle (IMP) DNA damage response, signal transduction by p53 class mediator (IMP) DNA repair (IEA) forebrain development (IMP) meiotic spindle organization (IMP) multicellular organism growth (IMP) negative regulation of maintenance of mitotic sister chromatid cohesion, telomeric (IEA,ISO) nucleosome assembly (ISO,ISS) positive regulation of nuclear cell cycle DNA replication (IMP) positive regulation of telomere maintenance (IMP) positive regulation of transcription by RNA polymerase II (IGI,ISO) post-embryonic forelimb morphogenesis (IMP) protein localization to chromosome, telomeric region (IMP) replication fork processing (IBA,IMP) seminiferous tubule development (IMP) Sertoli cell development (IMP) spermatogenesis (IMP) subtelomeric heterochromatin formation (IMP,ISO) transcription by RNA polymerase II (IGI)
1.
The alternative lengthening of telomere phenotype is significantly associated with loss of ATRX expression in high-grade pediatric and adult astrocytomas: a multi-institutional study of 214 astrocytomas.
Abedalthagafi M, etal., Mod Pathol. 2013 Nov;26(11):1425-32. doi: 10.1038/modpathol.2013.90. Epub 2013 Jun 14.
2.
Alpha-thalassemia intellectual disability: variable phenotypic expression among males with a recurrent nonsense mutation - c.109C>T (p.R37X).
Basehore MJ, etal., Clin Genet. 2014 May 7. doi: 10.1111/cge.12420.
3.
Novel ATRX gene damaging missense mutation c.6740A>C segregates with profound to severe intellectual deficiency without alpha thalassaemia.
Bouazzi H, etal., Indian J Med Res. 2016 Jan;143(1):43-8. doi: 10.4103/0971-5916.178589.
4.
Expression and prognostic impact of alpha thalassemia/mental retardation X-linked and death domain-associated protein in human lung cancer.
Buentzel J, etal., Medicine (Baltimore). 2019 Aug;98(31):e16712. doi: 10.1097/MD.0000000000016712.
5.
ATRX mRNA expression combined with IDH1/2 mutational status and Ki-67 expression refines the molecular classification of astrocytic tumors: evidence from the whole transcriptome sequencing of 169 samples samples.
Cai J, etal., Oncotarget. 2014 May 15;5(9):2551-61.
6.
Immunohistochemical Analysis of ATRX, IDH1 and p53 in Glioblastoma and Their Correlations with Patient Survival.
Chaurasia A, etal., J Korean Med Sci. 2016 Aug;31(8):1208-14. doi: 10.3346/jkms.2016.31.8.1208. Epub 2016 May 30.
7.
Genomic alterations of plasma cell-free DNAs in small cell lung cancer and their clinical relevance.
Du M, etal., Lung Cancer. 2018 Jun;120:113-121. doi: 10.1016/j.lungcan.2018.04.008. Epub 2018 Apr 12.
8.
A nonsense mutation of the ATRX gene causing mild mental retardation and epilepsy.
Guerrini R, etal., Ann Neurol. 2000 Jan;47(1):117-21.
9.
Whole-exome sequencing identifies ATRX mutation as a key molecular determinant in lower-grade glioma.
Kannan K, etal., Oncotarget. 2012 Oct;3(10):1194-203.
10.
Telomere length abnormalities and telomerase RNA component expression in gastroenteropancreatic neuroendocrine tumors.
Kim HS, etal., Anticancer Res. 2015 Jun;35(6):3501-10.
11.
Mutations of codon 2085 in the helicase domain of ATRX are recurrent and cause ATRX syndrome.
Lacoste C, etal., Clin Genet. 2013 Dec 1. doi: 10.1111/cge.12319.
12.
A possible involvement of TIF1 alpha and TIF1 beta in the epigenetic control of transcription by nuclear receptors.
Le Douarin B, etal., EMBO J 1996 Dec 2;15(23):6701-15.
13.
ATRX induction by mutant huntingtin via Cdx2 modulates heterochromatin condensation and pathology in Huntington's disease.
Lee J, etal., Cell Death Differ. 2012 Jul;19(7):1109-16. doi: 10.1038/cdd.2011.196. Epub 2012 Jan 13.
14.
Comprehensive screening of alternative lengthening of telomeres phenotype and loss of ATRX expression in sarcomas.
Liau JY, etal., Mod Pathol. 2015 Dec;28(12):1545-54. doi: 10.1038/modpathol.2015.114. Epub 2015 Oct 2.
15.
[Mutation analysis for a Chinese family featuring X-linked alpha thalassemia/mental retardation syndrome].
Lin SB, etal., Zhonghua Yi Xue Yi Chuan Xue Za Zhi. 2013 Dec;30(6):654-8. doi: 10.3760/cma.j.issn.1003-9406.2013.06.004.
16.
Loss of DAXX and ATRX are associated with chromosome instability and reduced survival of patients with pancreatic neuroendocrine tumors.
Marinoni I, etal., Gastroenterology. 2014 Feb;146(2):453-60.e5. doi: 10.1053/j.gastro.2013.10.020. Epub 2013 Oct 19.
17.
MGDs mouse GO annotations
MGD data from the GO Consortium
18.
MGD IEA
MGD IEA
19.
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.
Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
20.
OMIM Disease Annotation Pipeline
OMIM Disease Annotation Pipeline
21.
Decreased expression of the chromatin remodeler ATRX associates with melanoma progression.
Qadeer ZA, etal., J Invest Dermatol. 2014 Jun;134(6):1768-72. doi: 10.1038/jid.2014.45. Epub 2014 Jan 27.
22.
Mouse MP Annotation Import Pipeline
RGD automated import pipeline
23.
ClinVar Automated Import and Annotation Pipeline
RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
24.
Data Import for Chemical-Gene Interactions
RGD automated import pipeline for gene-chemical interactions
25.
Targeted loss of the ATR-X syndrome protein in the limb mesenchyme of mice causes brachydactyly.
Solomon LA, etal., Hum Mol Genet. 2013 Dec 15;22(24):5015-25. doi: 10.1093/hmg/ddt351. Epub 2013 Jul 25.
26.
Large-scale identification of mammalian proteins localized to nuclear sub-compartments.
Sutherland HG, etal., Hum Mol Genet 2001 Sep 1;10(18):1995-2011.
27.
Sleeping Beauty transposon mutagenesis identifies genes that cooperate with mutant Smad4 in gastric cancer development.
Takeda H, etal., Proc Natl Acad Sci U S A. 2016 Apr 5;113(14):E2057-65. doi: 10.1073/pnas.1603223113. Epub 2016 Mar 22.
28.
Loss of ATRX expression predicts worse prognosis in pulmonary carcinoid tumors.
Terra Md SBSP, etal., Hum Pathol. 2019 Dec;94:78-85. doi: 10.1016/j.humpath.2019.08.022. Epub 2019 Sep 6.
29.
XNP mutation in a large family with Juberg-Marsidi syndrome.
Villard L, etal., Nat Genet. 1996 Apr;12(4):359-60.
30.
Expanding phenotype of XNP mutations: mild to moderate mental retardation.
Yntema HG, etal., Am J Med Genet. 2002 Jul 1;110(3):243-7.
Atrx Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 X 104,841,221 - 104,972,978 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl X 104,841,221 - 104,973,009 (-) Ensembl GRCm39 Ensembl GRCm38 X 105,797,615 - 105,929,372 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl X 105,797,615 - 105,929,403 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 X 102,992,954 - 103,124,711 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 X 102,002,872 - 102,132,061 (-) NCBI MGSCv36 mm8 Celera X 92,651,743 - 92,783,324 (-) NCBI Celera Cytogenetic Map X D NCBI cM Map X 47.26 NCBI
ATRX Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 X 77,504,880 - 77,786,216 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl X 77,504,880 - 77,786,233 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 X 76,760,358 - 77,041,702 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 X 76,647,012 - 76,928,375 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Celera X 77,001,253 - 77,282,613 (-) NCBI Celera Cytogenetic Map X q21.1 NCBI HuRef X 70,349,443 - 70,629,029 (-) NCBI HuRef CHM1_1 X 76,653,073 - 76,934,420 (-) NCBI CHM1_1 T2T-CHM13v2.0 X 75,942,420 - 76,223,770 (-) NCBI T2T-CHM13v2.0
Atrx Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 X 74,916,548 - 75,062,880 (-) NCBI GRCr8 mRatBN7.2 X 70,850,981 - 70,997,330 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl X 70,850,981 - 70,997,330 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx X 72,359,919 - 72,506,253 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 X 75,860,229 - 76,006,565 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 X 73,423,392 - 73,569,729 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 X 76,820,110 - 76,979,155 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl X 76,820,329 - 76,979,115 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl X 76,692,970 - 76,708,878 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 X 77,469,497 - 77,515,204 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 Rnor_5.0 X 55,943,493 - 56,101,756 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 X 93,903,794 - 94,051,337 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 X 94,034,366 - 94,057,029 (-) NCBI Celera X 72,164,814 - 72,309,854 (-) NCBI Celera Cytogenetic Map X q22 NCBI
Atrx Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955557 947,167 - 1,252,724 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955557 947,368 - 1,252,701 (-) NCBI ChiLan1.0 ChiLan1.0
ATRX Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 X 77,081,989 - 77,368,610 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 X 77,085,587 - 77,372,212 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 X 66,682,968 - 66,969,421 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 X 76,795,574 - 77,083,486 (-) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl X 76,795,574 - 77,083,486 (-) Ensembl panpan1.1 panPan2
ATRX Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 X 59,772,067 - 60,107,016 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl X 59,774,585 - 60,106,980 (-) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha X 50,787,446 - 51,120,278 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 X 61,011,471 - 61,270,437 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl X 61,011,677 - 61,270,443 (-) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 X 58,719,357 - 59,051,934 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 X 60,325,606 - 60,661,270 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 X 59,917,163 - 60,249,816 (-) NCBI UU_Cfam_GSD_1.0
Atrx Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 X 42,229,198 - 42,451,804 (+) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936683 2,495,959 - 2,718,620 (-) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936683 2,496,307 - 2,718,539 (-) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
ATRX Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl X 61,584,848 - 61,872,287 (-) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 X 61,584,028 - 61,872,341 (-) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 X 70,390,618 - 70,509,341 (-) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
ATRX Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 X 66,449,830 - 66,737,220 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl X 66,448,449 - 66,737,164 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666067 14,772,636 - 15,066,083 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
.
Predicted Target Of
Count of predictions: 2965 Count of miRNA genes: 945 Interacting mature miRNAs: 1320 Transcripts: ENSMUST00000101305, ENSMUST00000113573, ENSMUST00000123174, ENSMUST00000126345, ENSMUST00000127221, ENSMUST00000128968, ENSMUST00000130980, ENSMUST00000133543, ENSMUST00000134381, ENSMUST00000134507, ENSMUST00000137453, ENSMUST00000138765, ENSMUST00000141609, ENSMUST00000142235, ENSMUST00000143361, ENSMUST00000146193, ENSMUST00000150914, ENSMUST00000154866, ENSMUST00000155445 Prediction methods: Miranda, Pita, Rnahybrid, Targetscan Result types: miRGate_prediction
4141630 Gct6_m granulosa cell tumorigenesis 6 (mouse) Not determined 47179121 129764756 Mouse 13208552 Wght12_m weight 12 (mouse) X 94043606 149782996 Mouse 4141803 Lmr30_m leishmaniasis resistance 30 (mouse) Not determined 85062606 119062720 Mouse 13208556 Lgth14_m body length 14 (mouse) X 94043606 149782996 Mouse 13824980 Ferq1_m genetic fertility QTL 1 (mouse) X 54045360 148782996 Mouse 11075102 Modc2_m modifier of Odc2 (mouse) X 80189914 114190059 Mouse 1357500 Mdmsc6_m modifier of muscularity 6 (mouse) Not determined X 75306671 109306758 Mouse 1357823 Spha3_m sperm head anomaly 3 (mouse) Not determined X 102055848 162758941 Mouse 1357433 Dbts2_m diabetes 2 (mouse) Not determined X 7226295 150107038 Mouse 4141665 Mhysq2_m male hybrid sterility QTL 2 (mouse) Not determined 71453852 139203212 Mouse
DXMit213
Mouse Assembly Chr Position (strand) Source JBrowse GRCm38 X 105,864,610 - 105,864,721 UniSTS GRCm38 MGSCv37 X 103,059,949 - 103,060,060 UniSTS GRCm37 Celera X 92,718,708 - 92,718,837 UniSTS Cytogenetic Map X D UniSTS cM Map X 44.4 UniSTS Whitehead Genetic X 31.7 UniSTS Whitehead/MRC_RH X 1159.63 UniSTS Whitehead_YAC X UniSTS
AI447451
Mouse Assembly Chr Position (strand) Source JBrowse GRCm38 X 105,797,898 - 105,797,998 UniSTS GRCm38 MGSCv37 X 102,993,237 - 102,993,337 UniSTS GRCm37 Celera X 92,652,026 - 92,652,126 UniSTS Cytogenetic Map X D UniSTS cM Map X 43.8 UniSTS Whitehead/MRC_RH X 1159.73 UniSTS
RH126483
Mouse Assembly Chr Position (strand) Source JBrowse GRCm38 X 105,873,855 - 105,874,067 UniSTS GRCm38 MGSCv37 X 103,069,194 - 103,069,406 UniSTS GRCm37 Celera X 92,728,028 - 92,728,240 UniSTS Cytogenetic Map X D UniSTS cM Map X 42.0 UniSTS Whitehead/MRC_RH X 1159.73 UniSTS
MARC_6759-6760:992007400:1
Mouse Assembly Chr Position (strand) Source JBrowse GRCm38 X 105,855,973 - 105,856,579 UniSTS GRCm38 MGSCv37 X 103,051,312 - 103,051,918 UniSTS GRCm37 Celera X 92,710,046 - 92,710,652 UniSTS Cytogenetic Map X D UniSTS cM Map X 43.8 UniSTS
GDB:596212
Mouse Assembly Chr Position (strand) Source JBrowse GRCm38 X 105,830,948 - 105,832,496 UniSTS GRCm38 MGSCv37 X 103,026,287 - 103,027,835 UniSTS GRCm37 Celera X 92,685,056 - 92,686,604 UniSTS Cytogenetic Map X D UniSTS cM Map X 43.8 UniSTS
GDB:596250
Mouse Assembly Chr Position (strand) Source JBrowse GRCm38 X 105,801,406 - 105,802,803 UniSTS GRCm38 MGSCv37 X 102,996,745 - 102,998,142 UniSTS GRCm37 Celera X 92,655,534 - 92,656,931 UniSTS Cytogenetic Map X D UniSTS cM Map X 43.8 UniSTS
Atrx
Mouse Assembly Chr Position (strand) Source JBrowse Cytogenetic Map X D UniSTS cM Map X 47.26 UniSTS
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
Ensembl Acc Id:
ENSMUST00000101305 ⟹ ENSMUSP00000098863
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl X 104,925,561 - 104,972,183 (-) Ensembl GRCm38.p6 Ensembl X 105,881,955 - 105,928,577 (-) Ensembl
Ensembl Acc Id:
ENSMUST00000113573 ⟹ ENSMUSP00000109203
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl X 104,841,221 - 104,973,009 (-) Ensembl GRCm38.p6 Ensembl X 105,797,615 - 105,929,403 (-) Ensembl
Ensembl Acc Id:
ENSMUST00000123174
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl X 104,895,043 - 104,918,870 (-) Ensembl GRCm38.p6 Ensembl X 105,851,437 - 105,875,264 (-) Ensembl
Ensembl Acc Id:
ENSMUST00000126345
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl X 104,943,512 - 104,972,952 (-) Ensembl GRCm38.p6 Ensembl X 105,899,906 - 105,929,346 (-) Ensembl
Ensembl Acc Id:
ENSMUST00000127221 ⟹ ENSMUSP00000143664
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl X 104,861,676 - 104,869,731 (-) Ensembl GRCm38.p6 Ensembl X 105,818,070 - 105,826,125 (-) Ensembl
Ensembl Acc Id:
ENSMUST00000128968 ⟹ ENSMUSP00000121416
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl X 104,918,736 - 104,972,972 (-) Ensembl GRCm38.p6 Ensembl X 105,875,130 - 105,929,366 (-) Ensembl
Ensembl Acc Id:
ENSMUST00000130980 ⟹ ENSMUSP00000117528
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl X 104,931,387 - 104,973,003 (-) Ensembl GRCm38.p6 Ensembl X 105,887,781 - 105,929,397 (-) Ensembl
Ensembl Acc Id:
ENSMUST00000133543
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl X 104,921,975 - 104,923,993 (-) Ensembl GRCm38.p6 Ensembl X 105,878,369 - 105,880,387 (-) Ensembl
Ensembl Acc Id:
ENSMUST00000134381 ⟹ ENSMUSP00000122875
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl X 104,920,846 - 104,972,973 (-) Ensembl GRCm38.p6 Ensembl X 105,877,240 - 105,929,367 (-) Ensembl
Ensembl Acc Id:
ENSMUST00000134507 ⟹ ENSMUSP00000123085
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl X 104,920,566 - 104,972,956 (-) Ensembl GRCm38.p6 Ensembl X 105,876,960 - 105,929,350 (-) Ensembl
Ensembl Acc Id:
ENSMUST00000137453 ⟹ ENSMUSP00000120246
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl X 104,927,962 - 104,972,909 (-) Ensembl GRCm38.p6 Ensembl X 105,884,356 - 105,929,303 (-) Ensembl
Ensembl Acc Id:
ENSMUST00000138765
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl X 104,845,356 - 104,847,404 (-) Ensembl GRCm38.p6 Ensembl X 105,801,750 - 105,803,798 (-) Ensembl
Ensembl Acc Id:
ENSMUST00000141609
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl X 104,861,702 - 104,873,252 (-) Ensembl GRCm38.p6 Ensembl X 105,818,096 - 105,829,646 (-) Ensembl
Ensembl Acc Id:
ENSMUST00000142235
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl X 104,881,985 - 104,890,563 (-) Ensembl GRCm38.p6 Ensembl X 105,838,379 - 105,846,957 (-) Ensembl
Ensembl Acc Id:
ENSMUST00000143361
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl X 104,844,023 - 104,845,656 (-) Ensembl GRCm38.p6 Ensembl X 105,800,417 - 105,802,050 (-) Ensembl
Ensembl Acc Id:
ENSMUST00000146193
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl X 104,890,343 - 104,895,132 (-) Ensembl GRCm38.p6 Ensembl X 105,846,737 - 105,851,526 (-) Ensembl
Ensembl Acc Id:
ENSMUST00000150914 ⟹ ENSMUSP00000122034
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl X 104,920,566 - 104,972,976 (-) Ensembl GRCm38.p6 Ensembl X 105,876,960 - 105,929,370 (-) Ensembl
Ensembl Acc Id:
ENSMUST00000154866 ⟹ ENSMUSP00000121291
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl X 104,921,047 - 104,972,965 (-) Ensembl GRCm38.p6 Ensembl X 105,877,441 - 105,929,359 (-) Ensembl
Ensembl Acc Id:
ENSMUST00000155445
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl X 104,881,630 - 104,890,379 (-) Ensembl GRCm38.p6 Ensembl X 105,838,024 - 105,846,773 (-) Ensembl
Ensembl Acc Id:
ENSMUST00000196998
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl X 104,889,990 - 104,895,420 (-) Ensembl GRCm38.p6 Ensembl X 105,846,384 - 105,851,814 (-) Ensembl
Ensembl Acc Id:
ENSMUST00000197302 ⟹ ENSMUSP00000143163
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl X 104,900,209 - 104,931,429 (-) Ensembl GRCm38.p6 Ensembl X 105,856,603 - 105,887,823 (-) Ensembl
Ensembl Acc Id:
ENSMUST00000198209 ⟹ ENSMUSP00000142726
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl X 104,895,609 - 104,919,201 (-) Ensembl GRCm38.p6 Ensembl X 105,852,003 - 105,875,595 (-) Ensembl
Ensembl Acc Id:
ENSMUST00000198441 ⟹ ENSMUSP00000143565
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl X 104,921,995 - 104,972,844 (-) Ensembl GRCm38.p6 Ensembl X 105,878,389 - 105,929,238 (-) Ensembl
Ensembl Acc Id:
ENSMUST00000198448 ⟹ ENSMUSP00000143090
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl X 104,920,114 - 104,972,948 (-) Ensembl GRCm38.p6 Ensembl X 105,876,508 - 105,929,342 (-) Ensembl
Ensembl Acc Id:
ENSMUST00000198567 ⟹ ENSMUSP00000143007
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl X 104,869,750 - 104,881,877 (-) Ensembl GRCm38.p6 Ensembl X 105,826,144 - 105,838,271 (-) Ensembl
Ensembl Acc Id:
ENSMUST00000199233 ⟹ ENSMUSP00000143015
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl X 104,921,086 - 104,972,953 (-) Ensembl GRCm38.p6 Ensembl X 105,877,480 - 105,929,347 (-) Ensembl
Ensembl Acc Id:
ENSMUST00000200471 ⟹ ENSMUSP00000143280
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl X 104,909,152 - 104,918,911 (-) Ensembl GRCm38.p6 Ensembl X 105,865,546 - 105,875,305 (-) Ensembl
RefSeq Acc Id:
NM_009530 ⟹ NP_033556
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 X 104,841,221 - 104,972,978 (-) NCBI GRCm38 X 105,797,615 - 105,929,372 (-) NCBI MGSCv37 X 102,992,954 - 103,124,711 (-) RGD Celera X 92,651,743 - 92,783,324 (-) RGD cM Map X ENTREZGENE
Sequence:
GCGCCAATTCTCCTGCCCAAGCCTCGGCCCAACAAAATGGCGTCGGCATAGGCCTTGCTTTGTTTCCGTGGCTCTTGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGGTAGCGGACTCTGAGCTGGGAG
hide sequence
RefSeq Acc Id:
NP_033556 ⟸ NM_009530
- UniProtKB:
A2ADH4 (UniProtKB/Swiss-Prot), Q61687 (UniProtKB/Swiss-Prot)
- Sequence:
MTAEPMSGNKLSTLVQKLHDFLAHSSEESEETCSSPRLVMNQSTDKICGSGLNSDMMENNKEEGASTSEKSRSSGSSRSKRKPSIVTKYVESDDEKPTDENVNEKAATENSENDITMQSLPKGTVIVQ
hide sequence
Ensembl Acc Id:
ENSMUSP00000143007 ⟸ ENSMUST00000198567
Ensembl Acc Id:
ENSMUSP00000122034 ⟸ ENSMUST00000150914
Ensembl Acc Id:
ENSMUSP00000142726 ⟸ ENSMUST00000198209
Ensembl Acc Id:
ENSMUSP00000143565 ⟸ ENSMUST00000198441
Ensembl Acc Id:
ENSMUSP00000143090 ⟸ ENSMUST00000198448
Ensembl Acc Id:
ENSMUSP00000117528 ⟸ ENSMUST00000130980
Ensembl Acc Id:
ENSMUSP00000143163 ⟸ ENSMUST00000197302
Ensembl Acc Id:
ENSMUSP00000109203 ⟸ ENSMUST00000113573
Ensembl Acc Id:
ENSMUSP00000143664 ⟸ ENSMUST00000127221
Ensembl Acc Id:
ENSMUSP00000143015 ⟸ ENSMUST00000199233
Ensembl Acc Id:
ENSMUSP00000098863 ⟸ ENSMUST00000101305
Ensembl Acc Id:
ENSMUSP00000121291 ⟸ ENSMUST00000154866
Ensembl Acc Id:
ENSMUSP00000123085 ⟸ ENSMUST00000134507
Ensembl Acc Id:
ENSMUSP00000122875 ⟸ ENSMUST00000134381
Ensembl Acc Id:
ENSMUSP00000121416 ⟸ ENSMUST00000128968
Ensembl Acc Id:
ENSMUSP00000120246 ⟸ ENSMUST00000137453
Ensembl Acc Id:
ENSMUSP00000143280 ⟸ ENSMUST00000200471
RGD ID: 6845509 Promoter ID: MM_KWN:61495 Type: Non-CpG SO ACC ID: SO:0000170 Source: MPROMDB Tissues & Cell Lines: Brain, Lung Transcripts: OTTMUST00000044144 Position: Mouse Assembly Chr Position (strand) Source MGSCv36 X 102,996,796 - 102,998,332 (-) MPROMDB
RGD ID: 6845510 Promoter ID: MM_KWN:61496 Type: Non-CpG SO ACC ID: SO:0000170 Source: MPROMDB Tissues & Cell Lines: Brain Transcripts: OTTMUST00000044143 Position: Mouse Assembly Chr Position (strand) Source MGSCv36 X 102,998,631 - 102,999,131 (-) MPROMDB
RGD ID: 6845505 Promoter ID: MM_KWN:61498 Type: Non-CpG SO ACC ID: SO:0000170 Source: MPROMDB Tissues & Cell Lines: Kidney Transcripts: OTTMUST00000044142 Position: Mouse Assembly Chr Position (strand) Source MGSCv36 X 103,021,811 - 103,022,311 (-) MPROMDB
RGD ID: 6845506 Promoter ID: MM_KWN:61499 Type: Non-CpG SO ACC ID: SO:0000170 Source: MPROMDB Tissues & Cell Lines: Liver Transcripts: OTTMUST00000044141 Position: Mouse Assembly Chr Position (strand) Source MGSCv36 X 103,024,801 - 103,025,301 (-) MPROMDB
RGD ID: 6845507 Promoter ID: MM_KWN:61503 Type: Non-CpG SO ACC ID: SO:0000170 Source: MPROMDB Tissues & Cell Lines: Liver Transcripts: OTTMUST00000044138, UC009UBC.1 Position: Mouse Assembly Chr Position (strand) Source MGSCv36 X 103,046,306 - 103,046,806 (-) MPROMDB
RGD ID: 6845504 Promoter ID: MM_KWN:61505 Type: Non-CpG SO ACC ID: SO:0000170 Source: MPROMDB Tissues & Cell Lines: Brain, Kidney, Liver, Lung Transcripts: OTTMUST00000044137 Position: Mouse Assembly Chr Position (strand) Source MGSCv36 X 103,070,696 - 103,071,597 (-) MPROMDB
RGD ID: 6845511 Promoter ID: MM_KWN:61506 Type: Non-CpG SO ACC ID: SO:0000170 Source: MPROMDB Tissues & Cell Lines: BoneMarrow_0Hour, Brain, Liver, MEF_B6 Transcripts: OTTMUST00000058534 Position: Mouse Assembly Chr Position (strand) Source MGSCv36 X 103,075,246 - 103,076,427 (-) MPROMDB
RGD ID: 6845503 Promoter ID: MM_KWN:61510 Type: CpG-Island SO ACC ID: SO:0000170 Source: MPROMDB Tissues & Cell Lines: 3T3L1_Day0, 3T3L1_Day1, 3T3L1_Day2, 3T3L1_Day3, 3T3L1_Day4, BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, ES_Cell, Kidney, Liver, Lung, MEF_B4, MEF_B6, Spleen Transcripts: ENSMUST00000087810, ENSMUST00000101305, ENSMUST00000113573, ENSMUST00000113574, OTTMUST00000044145, OTTMUST00000058530, OTTMUST00000058531, OTTMUST00000058532, OTTMUST00000058533, UC009UBE.1, UC009UBF.1 Position: Mouse Assembly Chr Position (strand) Source MGSCv36 X 103,124,136 - 103,124,932 (-) MPROMDB
RGD ID: 13681172 Promoter ID: EPDNEW_M24736 Type: multiple initiation site Name: Atrx_2 Description: Mus musculus ATRX, chromatin remodeler , mRNA. SO ACC ID: SO:0000170 Source: EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/ ) Alternative Promoters: null; see alsoEPDNEW_M24737 Experiment Methods: Single-end sequencing. Position: Mouse Assembly Chr Position (strand) Source GRCm38 X 105,928,577 - 105,928,637 EPDNEW
RGD ID: 13681176 Promoter ID: EPDNEW_M24737 Type: initiation region Name: Atrx_1 Description: Mus musculus ATRX, chromatin remodeler , mRNA. SO ACC ID: SO:0000170 Source: EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/ ) Alternative Promoters: null; see alsoEPDNEW_M24736 Experiment Methods: Single-end sequencing. Position: Mouse Assembly Chr Position (strand) Source GRCm38 X 105,929,350 - 105,929,410 EPDNEW
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2017-03-21
Atrx
ATRX, chromatin remodeler
alpha thalassemia/mental retardation syndrome X-linked
Symbol and/or name change
5135510 APPROVED
2016-04-05
Atrx
alpha thalassemia/mental retardation syndrome X-linked
4833408C14Rik
RIKEN cDNA 4833408C14 gene
Data merged from RGD:1608143
737654 PROVISIONAL
2015-12-22
Atrx
alpha thalassemia/mental retardation syndrome X-linked
alpha thalassemia/mental retardation syndrome X-linked homolog (human)
Symbol and/or name change
5135510 APPROVED
