ATRX (ATRX chromatin remodeler) - Rat Genome Database

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Gene: ATRX (ATRX chromatin remodeler) Homo sapiens
Analyze
Symbol: ATRX
Name: ATRX chromatin remodeler
RGD ID: 1605736
HGNC Page HGNC
Description: Exhibits several functions, including DNA translocase activity; chromo shadow domain binding activity; and methylated histone binding activity. Involved in several processes, including chromatin organization; negative regulation of maintenance of mitotic sister chromatid cohesion, telomeric; and positive regulation of telomeric RNA transcription from RNA pol II promoter. Localizes to chromosome, subtelomeric region and nuclear body. Implicated in alpha thalassemia-X-linked intellectual disability syndrome; alpha-thalassemia myelodysplasia syndrome; and high grade glioma. Biomarker of glioblastoma; malignant astrocytoma; melanoma; and sarcoma.
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: alpha thalassemia/mental retardation syndrome X-linked; alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae); ATP-dependent helicase ATRX; ATR2; ATRX, chromatin remodeler; DNA dependent ATPase and helicase; helicase 2, X-linked; JMS; Juberg-Marsidi syndrome; mental retardation, X-linked 52; MGC2094; MRX52; MRXHF1; RAD54; RAD54 homolog; RAD54L; SFM1; SHS; Sutherland-Haan X-linked mental retardation syndrome; transcriptional regulator ATRX; X-linked helicase II; X-linked nuclear protein; XH2; XNP; Zinc finger helicase; ZNF-HX
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 EnsemblX77,504,878 - 77,786,233 (-)EnsemblGRCh38hg38GRCh38
GRCh38.p13 EnsemblX77,504,880 - 77,786,233 (-)EnsemblGRCh38hg38GRCh38
GRCh38X77,504,880 - 77,786,235 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37X76,760,358 - 77,041,702 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36X76,647,012 - 76,928,375 (-)NCBINCBI36hg18NCBI36
CeleraX77,001,253 - 77,282,613 (-)NCBI
Cytogenetic MapXq21.1NCBI
HuRefX70,349,443 - 70,629,029 (-)NCBIHuRef
CHM1_1X76,653,073 - 76,934,456 (-)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-dexrazoxane  (ISO)
(+)-pilocarpine  (ISO)
(S)-nicotine  (EXP,ISO)
1,2-dichloroethane  (ISO)
1,2-dimethylhydrazine  (ISO)
1-[(4-chlorophenyl)-phenylmethyl]-4-methylpiperazine  (ISO)
17beta-estradiol  (ISO)
2,3',4,4',5-Pentachlorobiphenyl  (ISO)
2,3,4,7,8-Pentachlorodibenzofuran  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (ISO)
2,3,7,8-Tetrachlorodibenzofuran  (ISO)
2,6-dinitrotoluene  (ISO)
2-butoxyethanol  (ISO)
3,4-methylenedioxymethamphetamine  (ISO)
4-vinylcyclohexene dioxide  (ISO)
acrolein  (EXP)
acrylamide  (ISO)
aflatoxin B1  (EXP,ISO)
aflatoxin B2  (EXP)
all-trans-retinoic acid  (EXP)
alpha-pinene  (EXP)
ammonium chloride  (ISO)
antirheumatic drug  (EXP)
benzene  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (EXP)
bisphenol A  (EXP,ISO)
Brevetoxin B  (EXP)
Brodifacoum  (ISO)
butanal  (EXP)
carbon nanotube  (ISO)
chloroprene  (ISO)
clobetasol  (ISO)
clorgyline  (EXP)
cobalt dichloride  (ISO)
cocaine  (ISO)
CU-O LINKAGE  (EXP)
cyclosporin A  (EXP,ISO)
cypermethrin  (ISO)
deoxynivalenol  (ISO)
diazinon  (EXP,ISO)
diuron  (ISO)
dorsomorphin  (EXP)
doxorubicin  (EXP,ISO)
elemental selenium  (EXP)
Enterolactone  (EXP)
ethanol  (EXP,ISO)
flutamide  (ISO)
folic acid  (ISO)
fonofos  (EXP)
formaldehyde  (ISO)
geldanamycin  (EXP)
gentamycin  (ISO)
hydrogen peroxide  (EXP,ISO)
idarubicin  (ISO)
irinotecan  (EXP)
josamycin  (EXP)
menadione  (ISO)
methoxychlor  (ISO)
methylparaben  (EXP)
miconazole  (ISO)
mitomycin C  (EXP)
morphine  (ISO)
N-ethyl-N-nitrosourea  (ISO)
naphthalene  (ISO)
nicotine  (EXP,ISO)
oxaliplatin  (ISO)
ozone  (EXP)
paracetamol  (EXP)
parathion  (EXP)
perfluorooctane-1-sulfonic acid  (EXP)
phenethyl isothiocyanate  (ISO)
phenobarbital  (ISO)
potassium chromate  (EXP)
propiconazole  (ISO)
resveratrol  (EXP,ISO)
rifampicin  (EXP)
SB 431542  (EXP)
selenium atom  (EXP)
silicon dioxide  (ISO)
sodium dichromate  (ISO)
succimer  (EXP,ISO)
sunitinib  (EXP)
tamibarotene  (EXP)
terbufos  (EXP)
testosterone enanthate  (EXP)
tetrachloromethane  (ISO)
thapsigargin  (ISO)
theophylline  (EXP)
thimerosal  (EXP)
topotecan  (ISO)
torcetrapib  (EXP)
trichostatin A  (EXP)
triptonide  (ISO)
troglitazone  (ISO)
tungsten  (ISO)
valproic acid  (EXP,ISO)
venlafaxine hydrochloride  (ISO)
vinclozolin  (ISO)
vitamin E  (EXP)
vorinostat  (EXP)
zoledronic acid  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
Abnormal hemoglobin  (IAGP)
Abnormal pulmonary valve cusp morphology  (IAGP)
Abnormality of blood and blood-forming tissues  (IAGP)
Abnormality of fontanelles  (IAGP)
Abnormality of metabolism/homeostasis  (IAGP)
Abnormality of movement  (IAGP)
Abnormality of the dentition  (IAGP)
Absent frontal sinuses  (IAGP)
Acute leukemia  (IAGP)
Aganglionic megacolon  (IAGP)
Agenesis of corpus callosum  (IAGP)
Aggressive behavior  (IAGP)
Ambiguous genitalia  (IAGP)
Anemia  (IAGP)
Anorexia  (IAGP)
Anteverted nares  (IAGP)
Atypical pulmonary carcinoid tumor  (IAGP)
Autism  (IAGP)
Blindness  (IAGP)
Bowel urgency  (IAGP)
Brachydactyly  (IAGP)
Bronchospasm  (IAGP)
Bruising susceptibility  (IAGP)
Cardiogenic shock  (IAGP)
Cerebral atrophy  (IAGP)
Cerebral cortical atrophy  (IAGP)
Chronic noninfectious lymphadenopathy  (IAGP)
Clinodactyly  (IAGP)
Clinodactyly of the 5th finger  (IAGP)
Coarse facial features  (IAGP)
Constipation  (IAGP)
Coxa valga  (IAGP)
Cryptorchidism  (IAGP)
Death in infancy  (IAGP)
Decreased testicular size  (IAGP)
Delayed skeletal maturation  (IAGP)
Depressed nasal bridge  (IAGP)
Depressed nasal ridge  (IAGP)
Depressivity  (IAGP)
Dermatological manifestations of systemic disorders  (IAGP)
Dolichocephaly  (IAGP)
Drooling  (IAGP)
Dysphasia  (IAGP)
Dyspnea  (IAGP)
Elevated hepatic transaminase  (IAGP)
Encephalitis  (IAGP)
Epicanthus  (IAGP)
Episodic abdominal pain  (IAGP)
Everted lower lip vermilion  (IAGP)
Exotropia  (IAGP)
Facial telangiectasia  (IAGP)
Fatigue  (IAGP)
Feeding difficulties in infancy  (IAGP)
Flat face  (IAGP)
Flexion contracture  (IAGP)
Gastroesophageal reflux  (IAGP)
Genu valgum  (IAGP)
Global developmental delay  (IAGP)
Growth delay  (IAGP)
HbH hemoglobin  (IAGP)
Hematemesis  (IAGP)
Hemivertebrae  (IAGP)
Hepatic failure  (IAGP)
Hepatomegaly  (IAGP)
High palate  (IAGP)
Hydronephrosis  (IAGP)
Hyperactivity  (IAGP)
Hyperreflexia  (IAGP)
Hypertelorism  (IAGP)
Hypochromic microcytic anemia  (IAGP)
Hypogonadism  (IAGP)
Hypoplasia of penis  (IAGP)
Hypoplastic philtrum  (IAGP)
Hypospadias  (IAGP)
Hypotension  (IAGP)
Hypotonia  (IAGP)
Immunodeficiency  (IAGP)
Increased circulating ACTH level  (IAGP)
Increased serum serotonin  (IAGP)
Infantile muscular hypotonia  (IAGP)
Intellectual disability  (IAGP)
Intellectual disability, progressive  (IAGP)
Intellectual disability, severe  (IAGP)
Intermittent diarrhea  (IAGP)
Iron deficiency anemia  (IAGP)
Joint stiffness  (IAGP)
Kyphoscoliosis  (IAGP)
Lack of bowel sounds  (IAGP)
Language impairment  (IAGP)
Large forehead  (IAGP)
Low-set ears  (IAGP)
Lower limb hypertonia  (IAGP)
Macroglossia  (IAGP)
Malar flattening  (IAGP)
Male pseudohermaphroditism  (IAGP)
Melena  (IAGP)
Microcephaly  (IAGP)
Microcytic anemia  (IAGP)
Micrognathia  (IAGP)
Micropenis  (IAGP)
Microtia  (IAGP)
Midface retrusion  (IAGP)
Myelodysplasia  (IAGP)
Myopia  (IAGP)
Narrow forehead  (IAGP)
Nausea and vomiting  (IAGP)
Neutropenia  (IAGP)
Obesity  (IAGP)
Oligodendroglioma  (IAGP)
Open mouth  (IAGP)
Optic atrophy  (IAGP)
Osteosarcoma  (IAGP)
Palpitations  (IAGP)
Paraganglioma  (IAGP)
Paroxysmal bursts of laughter  (IAGP)
Perimembranous ventricular septal defect  (IAGP)
Pes planus  (IAGP)
Poor appetite  (IAGP)
Posteriorly rotated ears  (IAGP)
Postnatal growth retardation  (IAGP)
Profound global developmental delay  (IAGP)
Protracted diarrhea  (IAGP)
Protruding tongue  (IAGP)
Ptosis  (IAGP)
Radial deviation of finger  (IAGP)
Recurrent urinary tract infections  (IAGP)
Reduced alpha/beta synthesis ratio  (IAGP)
Renal agenesis  (IAGP)
Renal hypoplasia  (IAGP)
Right ventricular failure  (IAGP)
Schizophrenia  (IAGP)
Scrotal hypoplasia  (IAGP)
Seizure  (IAGP)
Self-injurious behavior  (IAGP)
Sensorineural hearing impairment  (IAGP)
Shawl scrotum  (IAGP)
Short neck  (IAGP)
Short nose  (IAGP)
Short stature  (IAGP)
Short upper lip  (IAGP)
Slender finger  (IAGP)
Spastic paraplegia  (IAGP)
Spasticity  (IAGP)
Splenomegaly  (IAGP)
Stereotypy  (IAGP)
Talipes calcaneovalgus  (IAGP)
Talipes equinovarus  (IAGP)
Tapered finger  (IAGP)
Telecanthus  (IAGP)
Tented upper lip vermilion  (IAGP)
Thick lower lip vermilion  (IAGP)
Thin upper lip vermilion  (IAGP)
Thrombocytopenia  (IAGP)
Triangular nasal tip  (IAGP)
Tricuspid regurgitation  (IAGP)
U-Shaped upper lip vermilion  (IAGP)
Umbilical hernia  (IAGP)
Upslanted palpebral fissure  (IAGP)
Ventricular septal defect  (IAGP)
Vesicoureteral reflux  (IAGP)
Volvulus  (IAGP)
Vomiting  (IAGP)
Weight loss  (IAGP)
Wide mouth  (IAGP)
Wide nasal bridge  (IAGP)
Widely-spaced maxillary central incisors  (IAGP)
X-linked dominant inheritance  (IAGP)
X-linked recessive inheritance  (IAGP)
Zollinger-Ellison syndrome  (IAGP)
References

References - curated
1. Abedalthagafi M, etal., Mod Pathol. 2013 Nov;26(11):1425-32. doi: 10.1038/modpathol.2013.90. Epub 2013 Jun 14.
2. Basehore MJ, etal., Clin Genet. 2014 May 7. doi: 10.1111/cge.12420.
3. Bouazzi H, etal., Indian J Med Res. 2016 Jan;143(1):43-8. doi: 10.4103/0971-5916.178589.
4. Cai J, etal., Oncotarget. 2014 May 15;5(9):2551-61.
5. Chaurasia A, etal., J Korean Med Sci. 2016 Aug;31(8):1208-14. doi: 10.3346/jkms.2016.31.8.1208. Epub 2016 May 30.
6. Guerrini R, etal., Ann Neurol. 2000 Jan;47(1):117-21.
7. Kannan K, etal., Oncotarget. 2012 Oct;3(10):1194-203.
8. Lacoste C, etal., Clin Genet. 2013 Dec 1. doi: 10.1111/cge.12319.
9. Lee J, etal., Cell Death Differ. 2012 Jul;19(7):1109-16. doi: 10.1038/cdd.2011.196. Epub 2012 Jan 13.
10. Liau JY, etal., Mod Pathol. 2015 Dec;28(12):1545-54. doi: 10.1038/modpathol.2015.114. Epub 2015 Oct 2.
11. Lin SB, etal., Zhonghua Yi Xue Yi Chuan Xue Za Zhi. 2013 Dec;30(6):654-8. doi: 10.3760/cma.j.issn.1003-9406.2013.06.004.
12. Marinoni I, etal., Gastroenterology. 2014 Feb;146(2):453-60.e5. doi: 10.1053/j.gastro.2013.10.020. Epub 2013 Oct 19.
13. OMIM Disease Annotation Pipeline
14. Qadeer ZA, etal., J Invest Dermatol. 2014 Jun;134(6):1768-72. doi: 10.1038/jid.2014.45. Epub 2014 Jan 27.
15. RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
16. RGD automated import pipeline for gene-chemical interactions
17. RGD automated import pipeline for human HPO-to-gene-to-disease annotations
18. Solomon LA, etal., Hum Mol Genet. 2013 Dec 15;22(24):5015-25. doi: 10.1093/hmg/ddt351. Epub 2013 Jul 25.
19. Villard L, etal., Nat Genet. 1996 Apr;12(4):359-60.
20. Yntema HG, etal., Am J Med Genet. 2002 Jul 1;110(3):243-7.
Additional References at PubMed
PMID:1415255   PMID:1605216   PMID:1684092   PMID:3177467   PMID:3658675   PMID:7697714   PMID:7874112   PMID:8001970   PMID:8162050   PMID:8242062   PMID:8503439   PMID:8889548  
PMID:8968741   PMID:9043863   PMID:9244431   PMID:9321665   PMID:9326931   PMID:9499421   PMID:10204841   PMID:10398237   PMID:10398246   PMID:10417298   PMID:10570185   PMID:10660327  
PMID:10699177   PMID:10737800   PMID:10742099   PMID:10751095   PMID:10851248   PMID:10995512   PMID:11050622   PMID:11823444   PMID:12205100   PMID:12477932   PMID:12750285   PMID:12777533  
PMID:12858175   PMID:12953102   PMID:14592816   PMID:14645126   PMID:14690447   PMID:14990586   PMID:15231748   PMID:15252119   PMID:15302935   PMID:15350606   PMID:15466868   PMID:15508018  
PMID:15591283   PMID:15635413   PMID:15772651   PMID:15840729   PMID:15882967   PMID:15964851   PMID:16169070   PMID:16266892   PMID:16344560   PMID:16376512   PMID:16480427   PMID:16537041  
PMID:16712791   PMID:16990250   PMID:17081983   PMID:17118963   PMID:17221867   PMID:17296936   PMID:17353931   PMID:17579672   PMID:17609377   PMID:17957225   PMID:18227278   PMID:18409179  
PMID:18922870   PMID:19017809   PMID:19064565   PMID:19088125   PMID:19129197   PMID:19394292   PMID:19444003   PMID:19671661   PMID:19764021   PMID:19919584   PMID:20110566   PMID:20147399  
PMID:20159591   PMID:20211137   PMID:20301622   PMID:20309963   PMID:20467437   PMID:20504901   PMID:20651253   PMID:21029860   PMID:21056573   PMID:21209221   PMID:21252315   PMID:21267006  
PMID:21310198   PMID:21421568   PMID:21501635   PMID:21505078   PMID:21666677   PMID:21666679   PMID:21719641   PMID:21851155   PMID:21885354   PMID:21986699   PMID:22021382   PMID:22089611  
PMID:22102817   PMID:22129561   PMID:22356911   PMID:22391447   PMID:22416102   PMID:22575867   PMID:22583365   PMID:22787211   PMID:22829774   PMID:22869205   PMID:22886134   PMID:22976303  
PMID:23135716   PMID:23185534   PMID:23222847   PMID:23329831   PMID:23361940   PMID:23391111   PMID:23453691   PMID:23681356   PMID:23801766   PMID:23904111   PMID:23954140   PMID:24130152  
PMID:24412544   PMID:24458433   PMID:24462114   PMID:24530302   PMID:24559763   PMID:24651726   PMID:24981860   PMID:25210493   PMID:25229770   PMID:25275136   PMID:25416818   PMID:25417162  
PMID:25439321   PMID:25487495   PMID:25538301   PMID:25608029   PMID:25665578   PMID:25803170   PMID:25936994   PMID:25971279   PMID:25976463   PMID:26001292   PMID:26016385   PMID:26017030  
PMID:26022452   PMID:26055325   PMID:26143912   PMID:26190196   PMID:26210286   PMID:26291601   PMID:26340527   PMID:26373281   PMID:26395639   PMID:26468281   PMID:26496610   PMID:26741321  
PMID:26773061   PMID:26833422   PMID:26891131   PMID:26918938   PMID:26936505   PMID:27029610   PMID:27171262   PMID:27173435   PMID:27248496   PMID:27264870   PMID:27407094   PMID:27469217  
PMID:27578458   PMID:27634302   PMID:27650176   PMID:27663587   PMID:27788029   PMID:27796734   PMID:27869828   PMID:27872097   PMID:28062559   PMID:28077445   PMID:28190324   PMID:28218735  
PMID:28294389   PMID:28371217   PMID:28371511   PMID:28452859   PMID:28487353   PMID:28514442   PMID:28549927   PMID:28591701   PMID:28611215   PMID:28680062   PMID:28741530   PMID:28796347  
PMID:28855512   PMID:28875283   PMID:28875424   PMID:28976962   PMID:29026176   PMID:29084956   PMID:29378238   PMID:29404769   PMID:29507755   PMID:29509190   PMID:29535300   PMID:29545335  
PMID:29550880   PMID:29568061   PMID:29693772   PMID:29721183   PMID:29730439   PMID:29889582   PMID:29937341   PMID:30021884   PMID:30081149   PMID:30194745   PMID:30226859   PMID:30301828  
PMID:30315258   PMID:30423196   PMID:30465651   PMID:30499772   PMID:30585729   PMID:30631154   PMID:30804502   PMID:30808951   PMID:30948266   PMID:30961891   PMID:31018710   PMID:31152217  
PMID:31180492   PMID:31239290   PMID:31248990   PMID:31329278   PMID:31361513   PMID:31374064   PMID:31454099   PMID:31499081   PMID:31527615   PMID:31551363   PMID:31586073   PMID:31611308  
PMID:31631027   PMID:31706351   PMID:31746429   PMID:31895940   PMID:31960234   PMID:32005184   PMID:32060267   PMID:32176628   PMID:32227259   PMID:32416067   PMID:32457312   PMID:32678261  
PMID:32694731   PMID:32729303   PMID:32786267   PMID:32840778   PMID:32876692   PMID:33513905  


Genomics

Comparative Map Data
ATRX
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 EnsemblX77,504,878 - 77,786,233 (-)EnsemblGRCh38hg38GRCh38
GRCh38.p13 EnsemblX77,504,880 - 77,786,233 (-)EnsemblGRCh38hg38GRCh38
GRCh38X77,504,880 - 77,786,235 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37X76,760,358 - 77,041,702 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36X76,647,012 - 76,928,375 (-)NCBINCBI36hg18NCBI36
CeleraX77,001,253 - 77,282,613 (-)NCBI
Cytogenetic MapXq21.1NCBI
HuRefX70,349,443 - 70,629,029 (-)NCBIHuRef
CHM1_1X76,653,073 - 76,934,456 (-)NCBICHM1_1
Atrx
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X104,841,221 - 104,972,978 (-)NCBIGRCm39mm39
GRCm39 EnsemblX104,841,221 - 104,973,009 (-)Ensembl
GRCm38X105,797,615 - 105,929,372 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX105,797,615 - 105,929,403 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X102,992,954 - 103,124,711 (-)NCBIGRCm37mm9NCBIm37
MGSCv36X102,002,872 - 102,132,061 (-)NCBImm8
CeleraX92,651,743 - 92,783,324 (-)NCBICelera
Cytogenetic MapXDNCBI
cM MapX47.26NCBI
Atrx
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2X70,850,981 - 70,997,330 (-)NCBI
Rnor_6.0 EnsemblX76,820,329 - 76,979,115 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 EnsemblX76,692,970 - 76,708,878 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0X76,820,110 - 76,979,155 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0X77,469,497 - 77,515,204 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.0X55,943,493 - 56,101,756 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X93,903,794 - 94,051,337 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1X94,034,366 - 94,057,029 (-)NCBI
CeleraX72,164,814 - 72,309,854 (-)NCBICelera
Cytogenetic MapXq22NCBI
Atrx
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955557947,167 - 1,252,724 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955557947,368 - 1,252,701 (-)NCBIChiLan1.0ChiLan1.0
ATRX
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1X76,795,574 - 77,083,486 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX76,795,574 - 77,083,486 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0X66,682,968 - 66,969,421 (-)NCBIMhudiblu_PPA_v0panPan3
ATRX
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X59,772,067 - 60,107,016 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX59,774,585 - 60,106,980 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX50,787,446 - 51,120,278 (-)NCBI
ROS_Cfam_1.0X61,011,471 - 61,270,437 (-)NCBI
UMICH_Zoey_3.1X58,719,357 - 59,051,934 (-)NCBI
UNSW_CanFamBas_1.0X60,325,606 - 60,661,270 (-)NCBI
UU_Cfam_GSD_1.0X59,917,163 - 60,249,816 (-)NCBI
Atrx
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X42,229,198 - 42,451,804 (+)NCBI
SpeTri2.0NW_0049366832,496,307 - 2,718,539 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ATRX
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX61,584,848 - 61,872,288 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X61,584,028 - 61,872,341 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X70,390,618 - 70,509,341 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ATRX
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X66,449,830 - 66,737,220 (-)NCBI
ChlSab1.1 EnsemblX66,448,449 - 66,737,164 (-)Ensembl

Position Markers
DXS9779  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37X76,762,427 - 76,762,574UniSTSGRCh37
Build 36X76,649,083 - 76,649,230RGDNCBI36
CeleraX77,003,324 - 77,003,471RGD
Cytogenetic MapXq21.1UniSTS
HuRefX70,351,467 - 70,351,614UniSTS
WI-21664  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37X76,762,505 - 76,762,654UniSTSGRCh37
Build 36X76,649,161 - 76,649,310RGDNCBI36
CeleraX77,003,402 - 77,003,551RGD
Cytogenetic MapXq21.1UniSTS
HuRefX70,351,545 - 70,351,694UniSTS
GeneMap99-GB4 RH MapX245.59UniSTS
Whitehead-RH MapX174.9UniSTS
RH103658  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37X76,760,446 - 76,760,546UniSTSGRCh37
Build 36X76,647,102 - 76,647,202RGDNCBI36
CeleraX77,001,343 - 77,001,443RGD
Cytogenetic MapXq21.1UniSTS
HuRefX70,349,533 - 70,349,633UniSTS
GeneMap99-GB4 RH MapX247.11UniSTS
DXS6980E  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37X76,762,076 - 76,762,188UniSTSGRCh37
Build 36X76,648,732 - 76,648,844RGDNCBI36
CeleraX77,002,973 - 77,003,085RGD
Cytogenetic MapXq21.1UniSTS
HuRefX70,351,115 - 70,351,227UniSTS
DXS56  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37X76,966,365 - 76,966,561UniSTSGRCh37
GRCh37X76,948,296 - 76,948,419UniSTSGRCh37
GRCh37X77,004,947 - 77,005,127UniSTSGRCh37
Build 36X76,891,603 - 76,891,783RGDNCBI36
CeleraX77,189,194 - 77,189,317UniSTS
CeleraX77,245,842 - 77,246,022RGD
CeleraX77,207,262 - 77,207,458UniSTS
Cytogenetic MapXq21.1UniSTS
HuRefX70,553,729 - 70,553,925UniSTS
HuRefX70,592,314 - 70,592,494UniSTS
HuRefX70,535,695 - 70,535,822UniSTS
UniSTS:99785  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37X76,850,685 - 76,850,846UniSTSGRCh37
Build 36X76,737,341 - 76,737,502RGDNCBI36
CeleraX77,091,582 - 77,091,743RGD
HuRefX70,439,001 - 70,439,162UniSTS
GDB:596193  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37X76,813,017 - 76,814,246UniSTSGRCh37
CeleraX77,053,915 - 77,055,144UniSTS
Cytogenetic MapXq21.1UniSTS
HuRefX70,401,383 - 70,402,612UniSTS
GDB:596198  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic MapXq21.1UniSTS
GDB:596204  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic MapXq21.1UniSTS
GDB:596209  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic MapXq21.1UniSTS
GDB:596212  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37X76,854,980 - 76,855,952UniSTSGRCh37
CeleraX77,095,877 - 77,096,849UniSTS
Cytogenetic MapXq21.1UniSTS
HuRefX70,443,296 - 70,444,268UniSTS
GDB:596219  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic MapXq21.1UniSTS
GDB:596225  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic MapXq21.1UniSTS
GDB:596231  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37X76,888,798 - 76,890,126UniSTSGRCh37
CeleraX77,129,695 - 77,131,023UniSTS
Cytogenetic MapXq21.1UniSTS
HuRefX70,476,980 - 70,478,309UniSTS
GDB:596234  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic MapXq21.1UniSTS
GDB:596239  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic MapXq21.1UniSTS
GDB:596244  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic MapXq21.1UniSTS
GDB:596250  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37X76,776,324 - 76,777,854UniSTSGRCh37
CeleraX77,017,221 - 77,018,751UniSTS
Cytogenetic MapXq21.1UniSTS
HuRefX70,365,391 - 70,366,921UniSTS
GDB:596255  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic MapXq21.1UniSTS
GDB:596258  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37X76,763,861 - 76,764,071UniSTSGRCh37
Build 36X76,650,517 - 76,650,727RGDNCBI36
CeleraX77,004,758 - 77,004,968RGD
Cytogenetic MapXq21.1UniSTS
HuRefX70,352,901 - 70,353,111UniSTS
GDB:596262  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic MapXq21.1UniSTS
GDB:596276  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic MapXq21.1UniSTS
GDB:596286  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic MapXq21.1UniSTS
GDB:596290  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic MapXq21.1UniSTS
GDB:596303  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic MapXq21.1UniSTS
GDB:596309  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic MapXq21.1UniSTS
SHGC-112339  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37X76,949,792 - 76,950,084UniSTSGRCh37
Build 36X76,836,448 - 76,836,740RGDNCBI36
CeleraX77,190,690 - 77,190,982RGD
Cytogenetic MapXq21.1UniSTS
HuRefX70,537,195 - 70,537,487UniSTS
SHGC-6680  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37X76,951,858 - 76,952,066UniSTSGRCh37
Build 36X76,838,514 - 76,838,722RGDNCBI36
CeleraX77,192,756 - 77,192,964RGD
Cytogenetic MapXq21.1UniSTS
HuRefX70,539,261 - 70,539,469UniSTS
ATRX_1237  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37X76,937,521 - 76,938,274UniSTSGRCh37
Build 36X76,824,177 - 76,824,930RGDNCBI36
CeleraX77,178,419 - 77,179,172RGD
HuRefX70,524,940 - 70,525,693UniSTS
STS-U72937  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37X76,763,613 - 76,763,831UniSTSGRCh37
Build 36X76,650,269 - 76,650,487RGDNCBI36
CeleraX77,004,510 - 77,004,728RGD
Cytogenetic MapXq21.1UniSTS
HuRefX70,352,653 - 70,352,871UniSTS
GeneMap99-GB4 RH MapX249.83UniSTS
NCBI RH MapX518.4UniSTS
MARC_6759-6760:992007400:1  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37X76,918,986 - 76,920,228UniSTSGRCh37
CeleraX77,159,882 - 77,161,125UniSTS
GDB:596216  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic MapXq21.1UniSTS
GDB:596281  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37X76,855,214 - 76,856,032UniSTSGRCh37
CeleraX77,096,111 - 77,096,929UniSTS
Cytogenetic MapXq21.1UniSTS
HuRefX70,443,530 - 70,444,348UniSTS
RH47714  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic MapXq21.1UniSTS
GeneMap99-GB4 RH MapX247.0UniSTS
DXS56  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic MapXq21.1UniSTS
DXS56  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic MapXq21.1UniSTS

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2827
Count of miRNA genes:1001
Interacting mature miRNAs:1181
Transcripts:ENST00000373341, ENST00000373344, ENST00000395603, ENST00000400866, ENST00000460639, ENST00000479487, ENST00000480283, ENST00000493470
Prediction methods:Microtar, Miranda, Pita, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High
Medium 3720 4234 2497 565 2091 313 7158 2946 5110 364 2042 2655 267 1 2159 4629 5 2
Low 934 1682 649 447 1019 378 1250 1374 2168 165 530 189 70 249 945 1
Below cutoff 26 24 2 2

Sequence

Nucleotide Sequences
RefSeq Transcripts NG_008838 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_000489 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_138270 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005262153 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005262154 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005262155 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005262156 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005262157 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006724666 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006724667 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006724668 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017029601 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017029602 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017029603 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017029604 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017029605 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017029606 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017029607 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017029608 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017029609 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017029610 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017029611 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001755700 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AA484729 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AA732359 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB101681 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB101682 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB101683 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB101684 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB101685 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB101686 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB101687 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB101688 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB101689 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB101690 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB101691 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB101692 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB101693 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB101694 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB101695 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB101696 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB101697 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB101698 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB101699 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB101700 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB102641 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB208928 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB209545 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC233293 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC233305 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF078692 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AH004919 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AH006694 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI733378 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK293241 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK295107 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK296959 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK297183 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK307791 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK308419 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL109753 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL121874 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL138743 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC002521 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BE927791 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM714186 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BQ189245 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BT007188 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX647222 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CB114986 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471104 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA759777 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA791316 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DR422800 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EF467914 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HF583488 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HF583489 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KC959404 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KF257930 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KF257931 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KF257932 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KF284154 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L33812 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L34363 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U09820 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U72936 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U72937 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U72938 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U75653 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X83753 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  Z84487 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENST00000373344   ⟹   ENSP00000362441
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 EnsemblX77,504,878 - 77,786,216 (-)Ensembl
RefSeq Acc Id: ENST00000395603   ⟹   ENSP00000378967
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 EnsemblX77,505,713 - 77,786,216 (-)Ensembl
RefSeq Acc Id: ENST00000400866   ⟹   ENSP00000383663
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 EnsemblX77,616,245 - 77,633,321 (-)Ensembl
RefSeq Acc Id: ENST00000460639
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 EnsemblX77,634,422 - 77,652,150 (-)Ensembl
RefSeq Acc Id: ENST00000479487
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 EnsemblX77,599,735 - 77,600,755 (-)Ensembl
RefSeq Acc Id: ENST00000480283   ⟹   ENSP00000480196
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 EnsemblX77,505,713 - 77,786,216 (-)Ensembl
RefSeq Acc Id: ENST00000493470   ⟹   ENSP00000485408
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 EnsemblX77,673,954 - 77,682,141 (-)Ensembl
RefSeq Acc Id: ENST00000622960   ⟹   ENSP00000485587
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 EnsemblX77,696,688 - 77,786,233 (-)Ensembl
RefSeq Acc Id: ENST00000623242   ⟹   ENSP00000485183
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 EnsemblX77,633,353 - 77,652,276 (-)Ensembl
RefSeq Acc Id: ENST00000623316   ⟹   ENSP00000485274
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 EnsemblX77,574,257 - 77,600,540 (-)Ensembl
RefSeq Acc Id: ENST00000623321   ⟹   ENSP00000485127
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 EnsemblX77,683,507 - 77,786,225 (-)Ensembl
RefSeq Acc Id: ENST00000623706
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 EnsemblX77,506,905 - 77,596,875 (-)Ensembl
RefSeq Acc Id: ENST00000624032   ⟹   ENSP00000485253
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 EnsemblX77,682,305 - 77,786,208 (-)Ensembl
RefSeq Acc Id: ENST00000624166   ⟹   ENSP00000485103
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 EnsemblX77,654,158 - 77,786,220 (-)Ensembl
RefSeq Acc Id: ENST00000624193
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 EnsemblX77,697,603 - 77,786,204 (-)Ensembl
RefSeq Acc Id: ENST00000624403
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 EnsemblX77,620,428 - 77,633,865 (-)Ensembl
RefSeq Acc Id: ENST00000624668   ⟹   ENSP00000485100
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 EnsemblX77,684,998 - 77,786,208 (-)Ensembl
RefSeq Acc Id: ENST00000624766
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 EnsemblX77,508,481 - 77,522,468 (-)Ensembl
RefSeq Acc Id: ENST00000625063   ⟹   ENSP00000485099
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 EnsemblX77,684,478 - 77,698,580 (-)Ensembl
RefSeq Acc Id: ENST00000635865   ⟹   ENSP00000490150
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 EnsemblX77,688,902 - 77,693,833 (-)Ensembl
RefSeq Acc Id: ENST00000636152
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 EnsemblX77,574,311 - 77,575,605 (-)Ensembl
RefSeq Acc Id: ENST00000636868
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 EnsemblX77,575,693 - 77,589,872 (-)Ensembl
RefSeq Acc Id: ENST00000637175
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 EnsemblX77,558,809 - 77,561,708 (-)Ensembl
RefSeq Acc Id: ENST00000637959
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 EnsemblX77,521,036 - 77,521,421 (-)Ensembl
RefSeq Acc Id: ENST00000675732   ⟹   ENSP00000502598
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 EnsemblX77,505,713 - 77,634,251 (-)Ensembl
RefSeq Acc Id: ENST00000675908
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 EnsemblX77,613,261 - 77,634,256 (-)Ensembl
RefSeq Acc Id: NM_000489   ⟹   NP_000480
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38X77,504,880 - 77,786,216 (-)NCBI
GRCh37X76,760,356 - 77,041,755 (-)NCBI
Build 36X76,647,012 - 76,928,375 (-)NCBI Archive
HuRefX70,349,443 - 70,629,065 (-)NCBI
CHM1_1X76,653,073 - 76,934,456 (-)NCBI
Sequence:
RefSeq Acc Id: NM_138270   ⟹   NP_612114
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38X77,504,880 - 77,786,216 (-)NCBI
GRCh37X76,760,356 - 77,041,755 (-)NCBI
Build 36X76,647,012 - 76,928,375 (-)NCBI Archive
HuRefX70,349,443 - 70,629,065 (-)NCBI
CHM1_1X76,653,073 - 76,934,456 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005262153   ⟹   XP_005262210
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38X77,505,701 - 77,786,216 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005262154   ⟹   XP_005262211
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38X77,505,701 - 77,786,226 (-)NCBI
GRCh37X76,760,356 - 77,041,755 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005262155   ⟹   XP_005262212
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38X77,505,701 - 77,786,233 (-)NCBI
GRCh37X76,760,356 - 77,041,755 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005262156   ⟹   XP_005262213
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38X77,505,701 - 77,786,235 (-)NCBI
GRCh37X76,760,356 - 77,041,755 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005262157   ⟹   XP_005262214
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38X77,505,701 - 77,786,226 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006724666   ⟹   XP_006724729
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38X77,505,701 - 77,786,226 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006724667   ⟹   XP_006724730
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38X77,505,701 - 77,786,235 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006724668   ⟹   XP_006724731
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38X77,616,249 - 77,786,226 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017029601   ⟹   XP_016885090
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38X77,505,701 - 77,786,226 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017029602   ⟹   XP_016885091
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38X77,505,701 - 77,786,216 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017029603   ⟹   XP_016885092
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38X77,505,701 - 77,786,235 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017029604   ⟹   XP_016885093
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38X77,505,701 - 77,786,226 (-)NCBI
Sequence: