Ugp2 (UDP-glucose pyrophosphorylase 2) - Rat Genome Database

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Gene: Ugp2 (UDP-glucose pyrophosphorylase 2) Mus musculus
Analyze
Symbol: Ugp2
Name: UDP-glucose pyrophosphorylase 2
RGD ID: 1320979
MGI Page MGI
Description: Predicted to enable several functions, including UTP:glucose-1-phosphate uridylyltransferase activity; glucose binding activity; and pyrimidine ribonucleotide binding activity. Predicted to be involved in several processes, including UDP-glucose metabolic process; glucose 1-phosphate metabolic process; and glycogen biosynthetic process. Predicted to be active in cytoplasm. Is expressed in several structures, including adrenal gland; alimentary system; brain; respiratory system; and urinary system. Human ortholog(s) of this gene implicated in developmental and epileptic encephalopathy 83. Orthologous to human UGP2 (UDP-glucose pyrophosphorylase 2); PARTICIPATES IN congenital sucrase-isomaltase deficiency pathway; galactokinase deficiency pathway; galactose metabolic pathway; INTERACTS WITH 1,2-dimethylhydrazine; 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: MGC38262; UDPGP; UGPase; uridindiphosphoglucosepyrophosphorylase 2; UTP--glucose-1-phosphate uridylyltransferase
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391121,271,126 - 21,321,267 (-)NCBIGRCm39mm39
GRCm39 Ensembl1121,271,138 - 21,321,201 (-)Ensembl
GRCm381121,321,126 - 21,371,267 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1121,321,138 - 21,371,201 (-)EnsemblGRCm38mm10GRCm38
MGSCv371121,221,141 - 21,270,882 (-)NCBIGRCm37mm9NCBIm37
MGSCv361121,221,147 - 21,270,478 (-)NCBImm8
Celera1123,469,505 - 23,519,228 (-)NCBICelera
Cytogenetic Map11A3.1NCBI
cM Map1113.89NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IBA,ISO)

References

Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12174196   PMID:12466851   PMID:12477932   PMID:14610273   PMID:14681479   PMID:15489334  
PMID:15782199   PMID:16141072   PMID:16141073   PMID:16416089   PMID:17095659   PMID:18023262   PMID:19884348   PMID:20059953   PMID:20300197   PMID:21267068   PMID:21873635   PMID:24583261  
PMID:25737280   PMID:27113764   PMID:27215380   PMID:27542691   PMID:28245920   PMID:31524221   PMID:31917811   PMID:32325033   PMID:32798765  


Genomics

Comparative Map Data
Ugp2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391121,271,126 - 21,321,267 (-)NCBIGRCm39mm39
GRCm39 Ensembl1121,271,138 - 21,321,201 (-)Ensembl
GRCm381121,321,126 - 21,371,267 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1121,321,138 - 21,371,201 (-)EnsemblGRCm38mm10GRCm38
MGSCv371121,221,141 - 21,270,882 (-)NCBIGRCm37mm9NCBIm37
MGSCv361121,221,147 - 21,270,478 (-)NCBImm8
Celera1123,469,505 - 23,519,228 (-)NCBICelera
Cytogenetic Map11A3.1NCBI
cM Map1113.89NCBI
UGP2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl263,840,952 - 63,891,562 (+)EnsemblGRCh38hg38GRCh38
GRCh38263,840,969 - 63,891,562 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37264,068,103 - 64,118,694 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36263,921,602 - 63,972,200 (+)NCBINCBI36hg18NCBI36
Build 34263,980,664 - 64,030,346NCBI
Celera263,913,075 - 63,963,963 (+)NCBI
Cytogenetic Map2p15NCBI
HuRef263,807,585 - 63,858,409 (+)NCBIHuRef
CHM1_1263,998,438 - 64,048,971 (+)NCBICHM1_1
Ugp2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21495,456,330 - 95,497,483 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl1495,456,330 - 95,496,830 (-)Ensembl
Rnor_6.014106,208,174 - 106,249,322 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl14106,208,176 - 106,248,539 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.014106,274,948 - 106,316,095 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.414102,072,724 - 102,113,561 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.114102,091,934 - 102,132,772 (-)NCBI
Celera1494,469,316 - 94,509,727 (-)NCBICelera
Cytogenetic Map14q22NCBI
Ugp2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542420,444,405 - 20,490,379 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542420,444,974 - 20,490,016 (-)NCBIChiLan1.0ChiLan1.0
UGP2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.12A65,032,218 - 65,084,510 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A65,043,871 - 65,084,175 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v02A63,906,778 - 63,959,346 (+)NCBIMhudiblu_PPA_v0panPan3
UGP2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11063,532,366 - 63,598,362 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1063,533,171 - 63,597,452 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1063,421,118 - 63,487,241 (+)NCBI
ROS_Cfam_1.01064,541,209 - 64,607,376 (+)NCBI
UMICH_Zoey_3.11064,223,314 - 64,289,173 (+)NCBI
UNSW_CanFamBas_1.01064,531,998 - 64,598,118 (+)NCBI
UU_Cfam_GSD_1.01064,824,849 - 64,890,750 (+)NCBI
Ugp2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629219,736,308 - 19,797,383 (-)NCBI
SpeTri2.0NW_0049364918,773,910 - 8,834,984 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
UGP2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl377,975,440 - 78,031,731 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1377,975,450 - 78,032,471 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2381,978,534 - 82,014,755 (-)NCBISscrofa10.2Sscrofa10.2susScr3
UGP2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11443,127,718 - 43,181,348 (-)NCBI
ChlSab1.1 Ensembl1443,128,055 - 43,180,569 (-)Ensembl
Vero_WHO_p1.0NW_02366604568,680,450 - 68,734,106 (+)NCBI
Ugp2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247629,564,500 - 9,619,899 (-)NCBI

Position Markers
Ugp2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map11A3.1UniSTS
cM Map1112.0UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357722Vtbt11_mvertebral trabecular bone trait 11 (mouse)Not determined11123930487Mouse
1300768Tshp9_mtooth shape 9 (mouse)Not determined11126026374Mouse
1301765Skull15_mskull morphology 15 (mouse)Not determined11126026374Mouse
1300661Lmr6_mleishmaniasis resistance 6 (mouse)Not determined11126026374Mouse
10044008Hbnr15_mHeligmosomoides bakeri nematode resistance 15 (mouse)Not determined1127705234277232Mouse
1300599Cocrb11_mcocaine related behavior 11 (mouse)Not determined11272035536721472Mouse
27095904Scvln12_msacral vertebrae length 2, 10 week (mouse)11330000034600000Mouse
27095909Scvln6_msacral vertebrae length 2, 5 week (mouse)11330000044200000Mouse
27226798Scvln18_msacral vertebrae length 2, 16 week (mouse)11330000060800000Mouse
26884446Sklq10_mskull length QTL 10, 10 week (mouse)11330000063000000Mouse
26884453Sklq16_mskull length QTL 16, 16 week (mouse)11330000072800000Mouse
13208559Wght10_mweight 10 (mouse)11400000089000000Mouse
13208558Lgth12_mbody length 12 (mouse)11400000095000000Mouse
1301634Eae6a_msusceptibility to experimental allergic encephalomyelitis 6a (mouse)Not determined11455789621429532Mouse
10053676Eae44a_mexperimental allergic encephalomyelitis susceptibility 44a (mouse)Not determined11455789621429532Mouse
27226741Metcl5_mmetatarsal-calcaneal length 5, 5 week (mouse)11470000046400000Mouse
27226735Metcl16_mmetatarsal-calcaneal length 16, 16 week (mouse)11530000035200000Mouse
1357518Tgyl1_mtriglyceride level 1 (mouse)Not determined11693027733966219Mouse
1300905Scc6_mcolon tumor susceptibility 6 (mouse)Not determined11693027789128908Mouse
1300990Bits3_mbitterness sensitivity 3 (mouse)Not determined11842212142422260Mouse
27226738Metcl11_mmetatarsal-calcaneal length 11, 10 week (mouse)11890000061500000Mouse
1302171Pgia28_mproteoglycan induced arthritis 28 (mouse)Not determined11895609742956218Mouse
4141047Nilac1_mnicotine induced locomotor activity 1 (mouse)Not determined11906178043061942Mouse
13463472Mcvq15_mmean corpuscular volume QTL 15 (mouse)111100123245001464Mouse
13463479Mchq19_mmean corpuscular hemoglobin QTL 19 (mouse)111100123245001464Mouse
26884401Huml4_mhumerus length 4, 10 week (mouse)111160000068600000Mouse
27226762Feml21_mfemur length 21, 16 week (mouse)111180000066100000Mouse
10412216Eae44_mexperimental allergic encephalomyelitis susceptibility 44 (mouse)Not determined111231863740060013Mouse
4141966Tailq1_mtail length QTL 1 (mouse)Not determined1231863768609504Mouse
1357851Scfq3_msubcutaneous fat pad weight QTL 3 (mouse)Not determined111231863768609504Mouse
1357437Epfq4_mepididymal fat pad weight QTL 4 (mouse)Not determined111231863768609504Mouse
4141127W3q4_mweight 3 weeks QTL 4 (mouse)Not determined1231863768609504Mouse
4142216Lgq1_mlate growth QTL 1 (mouse)Not determined1231863768609504Mouse
4142308W6q3_mweight 6 weeks QTL 3 (mouse)Not determined111231863768609504Mouse
4141582Lgaq1_mlate growth adjusted QTL 1 (mouse)Not determined1231863768609504Mouse
4142109W10q2_mweight 10 weeks QTL 2 (mouse)Not determined1231863768609504Mouse
4141470Egq4_mearly growth QTL 4 (mouse)Not determined1231863768609504Mouse
1357640Orq2_movulation rate QTL 2 (mouse)Not determined111231863768609504Mouse
1357720Kidpq1_mkidney weight percentage QTL 1 (mouse)Not determined111231863768609504Mouse
1559002Lmrq4_mLeishmania major resistance QTL 4 (mouse)Not determined111231863769794121Mouse
1357859Lvrq7_mliver weight QTL 7 (mouse)Not determined1112318637118131898Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112318637118131898Mouse
1558945Orgwq8_morgan weight QTL 8 (mouse)Not determined111710617567187585Mouse
10053687Eae6_msusceptibility to experimental allergic encephalomyelitis 6 (mouse)Not determined111783196668609504Mouse
1300938Bulb3_mbulb size 3 (mouse)Not determined111868778952687889Mouse
12801457Intmrm2_mintima/media ratio modifier 2 (mouse)111868778952687889Mouse
12801459Leuf1_mleukocyte filtration 1 (mouse)111868778952687889Mouse
12801460Intim2_mintima modifier 2 (mouse)111868778952687889Mouse
4141894Nidd6k_mNidd6 on KK-A (mouse)Not determined1917420497007000Mouse
1300579Thypr1_mthymocyte proliferative response 1 (mouse)Not determined111939175053391888Mouse
14746971Manh70_mmandible shape 70 (mouse)112001506354015063Mouse
4141398Tgq22_mtriglyceride QTL 22 (mouse)Not determined2127257955272579Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:451
Count of miRNA genes:222
Interacting mature miRNAs:254
Transcripts:ENSMUST00000060895, ENSMUST00000102875, ENSMUST00000133343, ENSMUST00000143890
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001290634 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_139297 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AF424698 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK033445 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK153885 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK177085 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK177417 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK196595 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK197624 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK205646 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK206548 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK209798 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK211484 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK213370 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK213550 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK214438 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK215699 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK216282 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK217204 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK218540 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK220026 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL772195 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL833772 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC023779 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC025585 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC026626 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC061208 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BQ033764 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY273488 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY729023 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CD775648 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466595 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ098156 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ137143 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000060895   ⟹   ENSMUSP00000056324
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1121,271,673 - 21,321,201 (-)Ensembl
GRCm38.p6 Ensembl1121,321,673 - 21,371,201 (-)Ensembl
RefSeq Acc Id: ENSMUST00000102875   ⟹   ENSMUSP00000099939
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1121,271,138 - 21,320,477 (-)Ensembl
GRCm38.p6 Ensembl1121,321,138 - 21,370,477 (-)Ensembl
RefSeq Acc Id: ENSMUST00000133343
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1121,271,924 - 21,279,892 (-)Ensembl
GRCm38.p6 Ensembl1121,321,924 - 21,329,892 (-)Ensembl
RefSeq Acc Id: ENSMUST00000143890
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1121,271,940 - 21,273,502 (-)Ensembl
GRCm38.p6 Ensembl1121,321,940 - 21,323,502 (-)Ensembl
RefSeq Acc Id: NM_001290634   ⟹   NP_001277563
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391121,271,126 - 21,321,267 (-)NCBI
GRCm381121,321,126 - 21,371,267 (-)NCBI
Celera1123,469,493 - 23,519,616 (-)NCBI
Sequence:
RefSeq Acc Id: NM_139297   ⟹   NP_647458
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391121,271,126 - 21,320,629 (-)NCBI
GRCm381121,321,126 - 21,370,629 (-)NCBI
MGSCv371121,221,141 - 21,270,882 (-)RGD
Celera1123,469,493 - 23,519,616 (-)NCBI
cM Map11 ENTREZGENE
Sequence:
Reference Sequences
RefSeq Acc Id: NP_647458   ⟸   NM_139297
- Peptide Label: isoform 1
- UniProtKB: Q91ZJ5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001277563   ⟸   NM_001290634
- Peptide Label: isoform 2
- UniProtKB: Q91ZJ5 (UniProtKB/Swiss-Prot),   Q3U548 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000056324   ⟸   ENSMUST00000060895
RefSeq Acc Id: ENSMUSP00000099939   ⟸   ENSMUST00000102875

Promoters
RGD ID:6822416
Promoter ID:MM_KWN:6603
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Kidney
Transcripts:OTTMUST00000011702
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361121,223,076 - 21,223,576 (-)MPROMDB
RGD ID:6822415
Promoter ID:MM_KWN:6604
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Liver
Transcripts:OTTMUST00000011703
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361121,229,431 - 21,229,931 (-)MPROMDB
RGD ID:6822418
Promoter ID:MM_KWN:6605
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Liver
Transcripts:ENSMUST00000109575,   UC007IDR.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361121,254,251 - 21,254,751 (-)MPROMDB
RGD ID:6822414
Promoter ID:MM_KWN:6606
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   Spleen
Transcripts:OTTMUST00000011700
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361121,270,386 - 21,271,477 (-)MPROMDB
RGD ID:6822419
Promoter ID:MM_KWN:6608
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day3,   BoneMarrow_0Hour
Transcripts:UC007IDT.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361121,271,051 - 21,271,551 (-)MPROMDB
RGD ID:8674068
Promoter ID:EPDNEW_M15065
Type:multiple initiation site
Name:Ugp2_1
Description:Mus musculus UDP-glucose pyrophosphorylase 2 , transcript variant2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M15066  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381121,370,478 - 21,370,538EPDNEW
RGD ID:8674070
Promoter ID:EPDNEW_M15066
Type:initiation region
Name:Ugp2_2
Description:Mus musculus UDP-glucose pyrophosphorylase 2 , transcript variant2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M15065  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381121,371,198 - 21,371,258EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2183447 AgrOrtholog
Ensembl Genes ENSMUSG00000001891 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Protein ENSMUSP00000056324 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000099939 ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000060895 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000102875 ENTREZGENE, UniProtKB/Swiss-Prot
Gene3D-CATH 3.90.550.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Nucleotide-diphossugar_trans UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  UDPGP_fam UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  UDPGP_trans UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:216558 UniProtKB/Swiss-Prot
MGD MGI:2183447 ENTREZGENE
NCBI Gene 216558 ENTREZGENE
Pfam UDPGP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Ugp2 PhenoGen
PIRSF UDPGP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF53448 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt Q3U548 ENTREZGENE, UniProtKB/TrEMBL
  Q8R0M2_MOUSE UniProtKB/TrEMBL
  Q91ZJ5 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary Q8R3D2 UniProtKB/Swiss-Prot