Dll1 (delta like canonical Notch ligand 1) - Rat Genome Database

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Gene: Dll1 (delta like canonical Notch ligand 1) Mus musculus
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Symbol: Dll1
Name: delta like canonical Notch ligand 1
RGD ID: 733843
MGI Page MGI
Description: Enables Notch binding activity and scaffold protein binding activity. Involved in several processes, including negative regulation of cell differentiation; nervous system development; and regionalization. Acts upstream of or within several processes, including inner ear development; negative regulation of cell differentiation; and regionalization. Located in several cellular components, including adherens junction; apical plasma membrane; and membrane raft. Is expressed in several structures, including alimentary system; central nervous system; limb; metanephros; and sensory organ. Orthologous to human DLL1 (delta like canonical Notch ligand 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: Delt; delta like-1; delta-like 1; delta-like 1 (Drosophila); delta-like protein 1; Delta1; drosophila Delta homolog 1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391715,587,616 - 15,597,275 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1715,587,616 - 15,597,134 (-)EnsemblGRCm39 Ensembl
GRCm381715,367,354 - 15,376,932 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1715,367,354 - 15,376,872 (-)EnsemblGRCm38mm10GRCm38
MGSCv371715,504,318 - 15,512,787 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361715,072,317 - 15,080,550 (-)NCBIMGSCv36mm8
Celera1716,154,981 - 16,163,462 (-)NCBICelera
Cytogenetic Map17A2NCBI
cM Map178.95NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
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Original Reference(s)
Dll1MouseChronic Pancreatitis  ISORGD:7338426482236mRNA,protein:increased expression:pancreasRGD 
Dll1MouseExperimental Autoimmune Encephalomyelitis  IMP 6482235 RGD 
Dll1Mousetemporal arteritis  ISORGD:7338426482238mRNA:increased expression:temporal arteryRGD 
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Original Reference(s)
Dll1Mousegenetic disease  ISORGD:7338428554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:25741868|PMID:28492532|PMID:31353024|PMID:33057194|PMID:35982159|PMID:35982160
Dll1Mouseholoprosencephaly  ISORGD:7338428554872ClinVar Annotator: match by term: Alobar holoprosencephaly | ClinVar Annotator: match by term: Holoprosencephaly sequenceClinVarPMID:28492532
Dll1MouseNEURODEVELOPMENTAL DISORDER WITH NONSPECIFIC BRAIN ABNORMALITIES AND WITH OR WITHOUT SEIZURES  ISORGD:7338428554872ClinVar Annotator: match by term: DLL1-related condition | ClinVar Annotator: match by term: Neurodevelopmental disorder more ...ClinVarPMID:16718694|PMID:17576681|PMID:21714819|PMID:25741868|PMID:28492532|PMID:31275352|PMID:31353024|PMID:33057194|PMID:34519870|PMID:36590296|PMID:9536098
Dll1Mouseprostate cancer  ISORGD:7338428554872ClinVar Annotator: match by term: Malignant tumor of prostateClinVarPMID:23265383
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Dll1MouseBrain Neoplasms  ISORGD:73384211554173CTD Direct Evidence: marker/mechanismCTDPMID:21127729
Dll1MouseBreast Neoplasms  ISORGD:73384211554173CTD Direct Evidence: marker/mechanismCTDPMID:21036696
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Dll1MouseNEURODEVELOPMENTAL DISORDER WITH NONSPECIFIC BRAIN ABNORMALITIES AND WITH OR WITHOUT SEIZURES  ISORGD:7338427240710 OMIM 

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Original Reference(s)
Dll1Mouse1,2-dimethylhydrazine decreases expressionEXP 64804641,2-Dimethylhydrazine results in decreased expression of DLL1 mRNACTDPMID:22206623
Dll1Mouse17beta-estradiol increases expressionEXP 6480464Estradiol results in increased expression of DLL1 mRNACTDPMID:25210133
Dll1Mouse17beta-estradiol decreases expressionISORGD:7338426480464Estradiol results in decreased expression of DLL1 mRNACTDPMID:31614463
Dll1Mouse17beta-estradiol decreases expressionEXP 6480464Estradiol results in decreased expression of DLL1 mRNACTDPMID:39298647
Dll1Mouse2,3,7,8-tetrachlorodibenzodioxine increases expressionEXP 6480464Tetrachlorodibenzodioxin results in increased expression of DLL1 mRNACTDPMID:19933214
Dll1Mouse2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of DLL1 mRNACTDPMID:28922406
Dll1Mouse2,3,7,8-tetrachlorodibenzodioxine increases expressionISORGD:7338426480464Tetrachlorodibenzodioxin results in increased expression of DLL1 mRNACTDPMID:17517823|PMID:22903824
Dll1Mouse2,3,7,8-tetrachlorodibenzodioxine affects expressionISORGD:7338426480464Tetrachlorodibenzodioxin affects the expression of DLL1 mRNACTDPMID:22298810
Dll1Mouse3,3',5,5'-tetrabromobisphenol A increases expressionEXP 6480464tetrabromobisphenol A results in increased expression of DLL1 mRNACTDPMID:35230478
Dll1Mouse3-methylcholanthrene increases expressionISORGD:709496480464Methylcholanthrene results in increased expression of DLL1 mRNACTDPMID:29094188
Dll1Mouse3-methylcholanthrene multiple interactionsISORGD:709496480464alpha-naphthoflavone inhibits the reaction [Methylcholanthrene results in increased expression of DLL1 mRNA]CTDPMID:29094188
Dll1Mouse3H-1,2-dithiole-3-thione increases expressionISORGD:7094964804641,2-dithiol-3-thione results in increased expression of DLL1 mRNACTDPMID:19162173
Dll1Mouse4,4'-sulfonyldiphenol affects methylationEXP 6480464bisphenol S affects the methylation of DLL1 geneCTDPMID:31683443
Dll1Mouse4-hydroxyphenyl retinamide increases expressionEXP 6480464Fenretinide results in increased expression of DLL1 mRNACTDPMID:28973697
Dll1Mouse5-aza-2'-deoxycytidine affects expressionISORGD:7338426480464Decitabine affects the expression of DLL1 mRNACTDPMID:23300844
Dll1Mouse6-propyl-2-thiouracil increases expressionISORGD:709496480464Propylthiouracil results in increased expression of DLL1 mRNACTDPMID:24780913|PMID:30047161
Dll1Mouseacetohydrazide decreases expressionEXP 6480464acetylhydrazine results in decreased expression of DLL1 mRNACTDPMID:15282401
Dll1Mouseacrylamide decreases expressionISORGD:709496480464Acrylamide results in decreased expression of DLL1 mRNACTDPMID:28959563
Dll1Mouseall-trans-retinoic acid decreases expressionISORGD:7338426480464Tretinoin results in decreased expression of DLL1 mRNACTDPMID:21934132
Dll1Mousealpha-naphthoflavone multiple interactionsISORGD:709496480464alpha-naphthoflavone inhibits the reaction [Methylcholanthrene results in increased expression of DLL1 mRNA]CTDPMID:29094188

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Biological Process
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Original Reference(s)
Dll1Mouseanimal organ morphogenesis involved_inNAS 2290270 PMID:10473134UniProtPMID:10473134
Dll1Mouseastrocyte development involved_inIMP 2290270 PMID:23688253UniProtPMID:23688253
Dll1Mouseauditory receptor cell fate commitment involved_inNAS 2290270 PMID:10473135, PMID:10704388UniProtPMID:10473135|PMID:10704388
Dll1Mousecell-cell signaling acts_upstream_of_or_withinIDA 2290270 PMID:16621992MGIPMID:16621992
Dll1Mousecerebellar molecular layer formation involved_inIMP 2290270 PMID:23688253UniProtPMID:23688253
Dll1Mousecerebellar Purkinje cell layer structural organization involved_inIMP 2290270 PMID:23688253UniProtPMID:23688253
Dll1Mouseclathrin-dependent endocytosis involved_inISORGD:709492290270 GO_CentralGO_REF:0000096
Dll1Mouseclathrin-dependent endocytosis involved_inISSUniProtKB:P976772290270 UniProtGO_REF:0000024
Dll1Mousecompartment pattern specification acts_upstream_of_or_withinIMPMGI:18619192290270 PMID:12001066MGIPMID:12001066
Dll1Mousedetermination of left/right symmetry acts_upstream_of_or_withinIMPMGI:18619192290270 PMID:12730124MGIPMID:12730124
Dll1Mouseendothelial tip cell fate specification involved_inIMP 2290270 PMID:22282195UniProtPMID:22282195
Dll1Mouseenergy homeostasis involved_inIMP 2290270 PMID:19562077UniProtPMID:19562077
Dll1Mouseheart looping involved_inIMP 2290270 PMID:12730124BHF-UCLPMID:12730124
Dll1Mousein utero embryonic development involved_inNAS 2290270 PMID:10473134UniProtPMID:10473134
Dll1Mouseinhibition of neuroepithelial cell differentiation acts_upstream_of_or_withinIMPMGI:1932522,MGI:30449072290270 PMID:16495313MGIPMID:16495313
Dll1Mouseinner ear auditory receptor cell differentiation involved_inNAS 2290270 PMID:9858718UniProtPMID:9858718
Dll1Mouseinner ear auditory receptor cell differentiation acts_upstream_ofIMPMGI:1932522|MGI:30449072290270 PMID:16495313MGIPMID:16495313
Dll1Mouseinner ear development acts_upstream_of_or_withinIMPMGI:1932522|MGI:30449072290270 PMID:16495313MGIPMID:16495313
Dll1Mouseinner ear morphogenesis involved_inNAS 2290270 PMID:9858718UniProtPMID:9858718
Dll1Mouselateral inhibition involved_inIDA 2290270 PMID:18997111UniProtPMID:18997111
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Cellular Component

  
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Original Reference(s)
Dll1Mouseadherens junction located_inIDA 2290270 PMID:15908431, PMID:24715457UniProtPMID:15908431|PMID:24715457
Dll1Mouseapical plasma membrane located_inIDA 2290270 PMID:24715457UniProtPMID:24715457
Dll1Mousecytoplasmic vesicle located_inIDA 2290270 PMID:16000382MGIPMID:16000382
Dll1Mousemembrane raft located_inIDA 2290270 PMID:18676613, PMID:21985982UniProtPMID:18676613|PMID:21985982
Dll1Mousenucleus located_inIEAUniProtKB-SubCell:SL-01912290270 UniProtGO_REF:0000044
Dll1Mouseplasma membrane located_inTAS 2290270 ReactomeReactome:R-MMU-2060798|Reactome:R-MMU-2193065|Reactome:R-MMU-9012873|Reactome:R-MMU-9023350|Reactome:R-MMU-9793915|Reactome:R-MMU-9825286|Reactome:R-MMU-9832194
Dll1Mouseplasma membrane located_inIDA 2290270 PMID:16000382MGIPMID:16000382
Dll1Mouseplasma membrane is_active_inIBAPANTHER:PTN001170801|FB:FBgn0000463|ZFIN:ZDB-GENE-000125-4|WB:WBGene00003001|MGI:104659|ZFIN:ZDB-GENE-980526-29|ZFIN:ZDB-GENE-990415-47|MGI:10968772290270 GO_CentralGO_REF:0000033

Molecular Function
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Original Reference(s)
Dll1Mousecalcium ion binding enablesIEAInterPro:IPR001881|InterPro:IPR0180972290270 InterProGO_REF:0000002
Dll1MouseNotch binding enablesIPIUniProtKB:O35516|UniProtKB:Q017052290270 PMID:10958687UniProtPMID:10958687
Dll1MouseNotch binding enablesISORGD:709492290270 GO_CentralGO_REF:0000096
Dll1MouseNotch binding enablesIBAPANTHER:PTN002371879|UniProtKB:Q9NR61|UniProtKB:P78504|RGD:70953|RGD:70949|MGI:107471|MGI:1095416|MGI:1098270|UniProtKB:O00548|MGI:1859388|UniProtKB:Q9Y219|FB:FBgn0000463|MGI:2152889|FB:FBgn0051665|MGI:104659|UniProtKB:P0DPK3|RGD:2937|FB:FBgn00041972290270 GO_CentralGO_REF:0000033
Dll1MouseNotch binding enablesIPIUniProtKB:Q017052290270 PMID:18676613, PMID:21985982UniProtPMID:18676613|PMID:21985982
Dll1MouseNotch binding enablesISOUniProtKB:O005482290270 GO_CentralGO_REF:0000119
Dll1Mouseprotein binding enablesIPIUniProtKB:Q80SY42290270 PMID:21985982UniProtPMID:21985982
Dll1Mouseprotein binding enablesIPIUniProtKB:Q9WVQ12290270 PMID:14529612, PMID:24025447IntActPMID:14529612|PMID:24025447
Dll1Mouseprotein binding enablesIPIPR:Q80SY42290270 PMID:16000382MGIPMID:16000382
Dll1Mouseprotein binding enablesIPIPR:P497692290270 PMID:12794186MGIPMID:12794186
Dll1Mouseprotein binding enablesIPIPR:Q017052290270 PMID:15574878MGIPMID:15574878
Dll1Mouseprotein binding enablesIPIUniProtKB:Q0MW302290270 PMID:17003037UniProtPMID:17003037
Dll1Mouseprotein binding enablesIPIUniProtKB:O355162290270 PMID:10958687UniProtPMID:10958687
Dll1Mouseprotein binding enablesIPIUniProtKB:P502812290270 PMID:21572390UniProtPMID:21572390
Dll1Mouseprotein binding enablesIPIUniProtKB:P394472290270 PMID:24715457UniProtPMID:24715457
Dll1Mouseprotein binding enablesIPIUniProtKB:A8MQ27|UniProtKB:Q923S62290270 PMID:19723503UniProtPMID:19723503
Dll1Mouseprotein binding enablesIPIUniProtKB:Q9QZJ62290270 PMID:15788413UniProtPMID:15788413
Dll1Mousereceptor ligand activity enablesISOUniProtKB:O005482290270 GO_CentralGO_REF:0000119
Dll1Mousereceptor ligand activity enablesIEAUniProtKB:O00548|ensembl:ENSP000003557182290270 EnsemblGO_REF:0000107
Dll1Mousescaffold protein binding enablesIPIUniProtKB:Q6RHR92290270 PMID:15908431UniProtPMID:15908431
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RGD Manual Annotations


  
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Original Reference(s)
Dll1MouseNotch signaling pathway   ISORGD:7338422302204 RGD 

Imported Annotations - KEGG (archival)

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Original Reference(s)
Dll1MouseNotch signaling pathway   IEA 6907045 KEGGmmu:04330

Imported Annotations - PID (archival)

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Original Reference(s)
Dll1MouseNotch signaling pathway   ISORGD:7338426484113 PIDPID:200015
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Original Reference(s)
Dll1Mouseabnormal axial skeleton morphology  IAGP 5509061 MGIPMID:17194759
Dll1Mouseabnormal bone mineral density  IAGP 5509061 MGIPMID:19562077
Dll1Mouseabnormal brain development  IAGP 5509061 MGIPMID:9109488
Dll1Mouseabnormal capillary branching pattern  IAGP 5509061 MGIPMID:19144989
Dll1Mouseabnormal cochlear hair cell morphology  IAGP 5509061 MGIPMID:16495313
Dll1Mouseabnormal cochlear hair cell morphology  IAGP 5509061 MGIPMID:16141228
Dll1Mouseabnormal defecation  IAGP 5509061 MGIPMID:19562077
Dll1Mouseabnormal direction of embryo turning  IAGP 5509061 MGIPMID:12441287
Dll1Mouseabnormal direction of heart looping  IAGP 5509061 MGIPMID:12441287
Dll1Mouseabnormal direction of heart looping  IAGP 5509061 MGIPMID:21559415
Dll1Mouseabnormal enzyme/coenzyme activity  IAGP 5509061 MGIPMID:19562077
Dll1Mouseabnormal heart morphology  IAGP 5509061 MGIPMID:21559415
Dll1Mouseabnormal muscle morphology  IAGP 5509061 MGIPMID:19144989
Dll1Mouseabnormal myoblast differentiation  IAGP 5509061 MGIPMID:17194759
Dll1Mouseabnormal myogenesis  IAGP 5509061 MGIPMID:19144989
Dll1Mouseabnormal myotube differentiation  IAGP 5509061 MGIPMID:17194759
Dll1Mouseabnormal nephron morphogenesis  IAGP 5509061 MGIPMID:23806616
Dll1Mouseabnormal neural tube morphology  IAGP 5509061 MGIPMID:21559415
Dll1Mouseabnormal neuron differentiation  IAGP 5509061 MGIPMID:20081190
Dll1Mouseabnormal neuron differentiation  IAGP 5509061 MGIPMID:9109488
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Reference Title
Reference Citation
1. JAGGED1 and delta1 differentially regulate the outcome of experimental autoimmune encephalomyelitis. Elyaman W, etal., J Immunol. 2007 Nov 1;179(9):5990-8.
2. Cell and molecular biology of Notch. Fiuza UM and Arias AM, J Endocrinol. 2007 Sep;194(3):459-74.
3. A family of mammalian Fringe genes implicated in boundary determination and the Notch pathway. Johnston SH, etal., Development 1997 Jun;124(11):2245-54.
4. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
5. MGDs mouse GO annotations MGD data from the GO Consortium
6. MGD IEA MGD IEA
7. HNF3beta and Lim1 interact in the visceral endoderm to regulate primitive streak formation and anterior-posterior polarity in the mouse embryo. Perea-Gomez A, etal., Development 1999 Oct;126(20):4499-511.
8. Blocking the NOTCH pathway inhibits vascular inflammation in large-vessel vasculitis. Piggott K, etal., Circulation. 2011 Jan 25;123(3):309-18. Epub 2011 Jan 10.
9. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
10. PID Annotation Import Pipeline Pipeline to import Pathway Interaction Database annotations from NCI into RGD
11. Mouse MP Annotation Import Pipeline RGD automated import pipeline
12. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
13. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
14. Pancreatic regeneration in chronic pancreatitis requires activation of the notch signaling pathway. Su Y, etal., J Gastrointest Surg. 2006 Nov;10(9):1230-41; discussion 1242.
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PMID:3581995   PMID:7490078   PMID:7671806   PMID:8923452   PMID:9102301   PMID:9109488   PMID:9153393   PMID:9207795   PMID:9242490   PMID:9272948   PMID:9291577   PMID:9315665  
PMID:9315901   PMID:9490412   PMID:9539122   PMID:9539123   PMID:9662403   PMID:9690472   PMID:9690473   PMID:9716576   PMID:9739106   PMID:9858718   PMID:9858728   PMID:9876181  
PMID:9882480   PMID:10021340   PMID:10079256   PMID:10080181   PMID:10196361   PMID:10330372   PMID:10393122   PMID:10473134   PMID:10473135   PMID:10476967   PMID:10557208   PMID:10615124  
PMID:10631167   PMID:10675782   PMID:10704388   PMID:10804169   PMID:10821758   PMID:10837027   PMID:10842072   PMID:10878608   PMID:10879540   PMID:10906448   PMID:10932180   PMID:10952889  
PMID:10958687   PMID:11002339   PMID:11017084   PMID:11035934   PMID:11044610   PMID:11044625   PMID:11060244   PMID:11076679   PMID:11118901   PMID:11124811   PMID:11133162   PMID:11171333  
PMID:11262239   PMID:11562355   PMID:11567612   PMID:11578869   PMID:11581320   PMID:11713346   PMID:11731257   PMID:11739954   PMID:11747084   PMID:11807030   PMID:11823422   PMID:11900971  
PMID:11912004   PMID:11934853   PMID:11937492   PMID:11973278   PMID:12001066   PMID:12036964   PMID:12167404   PMID:12175503   PMID:12194867   PMID:12217323   PMID:12354787   PMID:12397111  
PMID:12421720   PMID:12441287   PMID:12466851   PMID:12477932   PMID:12551931   PMID:12588854   PMID:12588999   PMID:12617809   PMID:12620991   PMID:12636920   PMID:12670869   PMID:12697902  
PMID:12730123   PMID:12730124   PMID:12794186   PMID:12839624   PMID:12846471   PMID:12866128   PMID:12900443   PMID:12925591   PMID:12971992   PMID:14517990   PMID:14529612   PMID:14651921  
PMID:14660750   PMID:14681479   PMID:14701881   PMID:14732396   PMID:14745966   PMID:14757642   PMID:14960495   PMID:15084498   PMID:15107403   PMID:15133515   PMID:15146182   PMID:15155583  
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Dll1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391715,587,616 - 15,597,275 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1715,587,616 - 15,597,134 (-)EnsemblGRCm39 Ensembl
GRCm381715,367,354 - 15,376,932 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1715,367,354 - 15,376,872 (-)EnsemblGRCm38mm10GRCm38
MGSCv371715,504,318 - 15,512,787 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361715,072,317 - 15,080,550 (-)NCBIMGSCv36mm8
Celera1716,154,981 - 16,163,462 (-)NCBICelera
Cytogenetic Map17A2NCBI
cM Map178.95NCBI
DLL1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh386170,282,206 - 170,291,078 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl6170,282,206 - 170,306,565 (-)EnsemblGRCh38hg38GRCh38
GRCh376170,591,294 - 170,600,166 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 366170,433,219 - 170,441,622 (-)NCBINCBI36Build 36hg18NCBI36
Build 346170,508,932 - 170,517,112NCBI
Celera6171,388,861 - 171,397,261 (-)NCBICelera
Cytogenetic Map6q27NCBI
HuRef6168,098,039 - 168,106,439 (-)NCBIHuRef
CHM1_16170,851,870 - 170,860,273 (-)NCBICHM1_1
T2T-CHM13v2.06171,640,900 - 171,649,769 (-)NCBIT2T-CHM13v2.0
Dll1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8164,985,161 - 64,993,274 (-)NCBIGRCr8
mRatBN7.2156,312,062 - 56,320,177 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl156,312,066 - 56,320,179 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx161,164,063 - 61,172,170 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0169,827,568 - 69,835,693 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0163,074,034 - 63,082,141 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0157,318,621 - 57,326,732 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl157,318,708 - 57,327,379 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01242,107,684 - 242,115,795 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4154,240,395 - 54,248,183 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1154,243,339 - 54,251,125 (-)NCBI
Celera152,521,212 - 52,529,325 (-)NCBICelera
Cytogenetic Map1q12NCBI
Dll1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554113,478,033 - 3,486,604 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554113,478,943 - 3,486,541 (+)NCBIChiLan1.0ChiLan1.0
DLL1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v25190,554,039 - 190,562,923 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan16188,458,574 - 188,466,578 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v06168,440,192 - 168,449,071 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.16173,535,941 - 173,545,362 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl6173,534,292 - 173,544,759 (-)Ensemblpanpan1.1panPan2
DLL1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11272,265,078 - 72,272,347 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1272,265,682 - 72,272,348 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1272,029,118 - 72,036,680 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01273,251,013 - 73,258,571 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.11272,524,902 - 72,532,408 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01272,346,638 - 72,354,211 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01272,737,393 - 72,744,967 (-)NCBIUU_Cfam_GSD_1.0
Dll1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404946151,369,680 - 151,377,618 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004937098213,227 - 220,427 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004937098212,704 - 220,589 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DLL1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1199,358 - 211,346 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11198,815 - 211,346 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21280,640 - 291,729 (+)NCBISscrofa10.2Sscrofa10.2susScr3
DLL1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11397,928,480 - 97,936,594 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1397,928,634 - 97,936,589 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604069,934,302 - 69,943,226 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dll1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248506,134,908 - 6,143,404 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248506,135,214 - 6,142,975 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in Dll1
328 total Variants

Predicted Target Of
Summary Value
Count of predictions:795
Count of miRNA genes:506
Interacting mature miRNAs:587
Transcripts:ENSMUST00000014917, ENSMUST00000124196, ENSMUST00000129395, ENSMUST00000140784, ENSMUST00000143460, ENSMUST00000152416
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 38 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1558807Ceat1_mchronic experimental autoimmune thyroiditis 1 (mouse)Not determined171263668226401133Mouse
12910982Pifs2_mpeptide-induced fatal syndrome 2 (mouse)17126189355Mouse
12910528Nrq1_mnoise-induced hearing loss resistant QTL 1 (mouse)17129198453Mouse
1302100Circp2_mcircadian photosensitivity 2 (mouse)Not determined17129198453Mouse
1300890Bhr3_mbronchial hyperresponsiveness 3 (mouse)Not determined17397489048866091Mouse
1357789Kdnw3_mkidney weight 3 (mouse)Not determined17485475247885665Mouse
1301338Lmr1_mleishmaniasis resistance 1 (mouse)Not determined171008134086996400Mouse
1300995Fembrs4_mfemur breaking strength 4 (mouse)Not determined171506165249061760Mouse
4142507Obrq13_mobesity resistance QTL 13 (mouse)Not determined1219832925076769Mouse
1300613Pcyts4_mplasmacytoma susceptibility 4 (mouse)Not determined17127081639Mouse

1 to 10 of 38 rows
Dll1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map17A2UniSTS
cM Map178.2UniSTS
UniSTS:237573  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381715,375,459 - 15,375,659UniSTSGRCm38
MGSCv371715,512,423 - 15,512,623UniSTSGRCm37
Celera1716,163,098 - 16,163,298UniSTS
Cytogenetic Map17A2UniSTS
cM Map178.2UniSTS
UniSTS:225019  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381715,367,806 - 15,367,966UniSTSGRCm38
MGSCv371715,504,770 - 15,504,930UniSTSGRCm37
Celera1716,155,433 - 16,155,593UniSTS
Cytogenetic Map17A2UniSTS
cM Map178.2UniSTS
PMC281641P2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381715,374,728 - 15,374,820UniSTSGRCm38
MGSCv371715,511,692 - 15,511,784UniSTSGRCm37
Celera1716,162,367 - 16,162,459UniSTS
Cytogenetic Map17A2UniSTS
cM Map178.2UniSTS
Dll1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381715,367,871 - 15,368,602UniSTSGRCm38
MGSCv371715,504,835 - 15,505,566UniSTSGRCm37
Celera1716,155,498 - 16,156,229UniSTS
Cytogenetic Map17A2UniSTS
Dll1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map17A2UniSTS
Dll1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map17A2UniSTS
Dll1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map17A2UniSTS
Dll1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381715,368,586 - 15,368,693UniSTSGRCm38
MGSCv371715,505,550 - 15,505,657UniSTSGRCm37
Celera1716,156,213 - 16,156,320UniSTS
Cytogenetic Map17A2UniSTS
Dll1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381715,367,796 - 15,368,040UniSTSGRCm38
MGSCv371715,504,760 - 15,505,004UniSTSGRCm37
Celera1716,155,423 - 16,155,667UniSTS
Cytogenetic Map17A2UniSTS
cM Map178.2UniSTS
Dll1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381715,367,697 - 15,368,495UniSTSGRCm38
MGSCv371715,504,661 - 15,505,459UniSTSGRCm37
Celera1716,155,324 - 16,156,122UniSTS
Cytogenetic Map17A2UniSTS
cM Map178.2UniSTS







Ensembl Acc Id: ENSMUST00000014917   ⟹   ENSMUSP00000014917
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1715,587,616 - 15,596,238 (-)Ensembl
GRCm38.p6 Ensembl1715,367,354 - 15,375,976 (-)Ensembl
Ensembl Acc Id: ENSMUST00000124196
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1715,591,886 - 15,595,362 (-)Ensembl
GRCm38.p6 Ensembl1715,371,624 - 15,375,100 (-)Ensembl
Ensembl Acc Id: ENSMUST00000129395
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1715,590,871 - 15,594,334 (-)Ensembl
GRCm38.p6 Ensembl1715,370,609 - 15,374,072 (-)Ensembl
Ensembl Acc Id: ENSMUST00000140784
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1715,587,787 - 15,588,652 (-)Ensembl
GRCm38.p6 Ensembl1715,367,525 - 15,368,390 (-)Ensembl
Ensembl Acc Id: ENSMUST00000143460   ⟹   ENSMUSP00000156341
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1715,595,056 - 15,597,134 (-)Ensembl
GRCm38.p6 Ensembl1715,374,794 - 15,376,872 (-)Ensembl
Ensembl Acc Id: ENSMUST00000152416
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1715,590,518 - 15,592,093 (-)Ensembl
GRCm38.p6 Ensembl1715,370,256 - 15,371,831 (-)Ensembl
RefSeq Acc Id: NM_001379042   ⟹   NP_001365971
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391715,587,618 - 15,597,194 (-)NCBI
GRCm381715,367,356 - 15,376,932 (-)NCBI
Sequence:
RefSeq Acc Id: NM_007865   ⟹   NP_031891
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391715,587,616 - 15,596,085 (-)NCBI
GRCm381715,367,354 - 15,375,823 (-)NCBI
MGSCv371715,504,318 - 15,512,787 (-)RGD
Celera1716,154,981 - 16,163,462 (-)RGD
cM Map17 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_011246267   ⟹   XP_011244569
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391715,587,616 - 15,596,411 (-)NCBI
GRCm381715,367,354 - 15,376,048 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036160292   ⟹   XP_036016185
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391715,587,616 - 15,597,275 (-)NCBI
Sequence:
RefSeq Acc Id: NP_031891   ⟸   NM_007865
- Peptide Label: precursor
- UniProtKB: Q6PFV7 (UniProtKB/Swiss-Prot),   Q61483 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011244569   ⟸   XM_011246267
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: NP_001365971   ⟸   NM_001379042
- Peptide Label: precursor
- UniProtKB: Q61483 (UniProtKB/Swiss-Prot),   Q6PFV7 (UniProtKB/Swiss-Prot)
Ensembl Acc Id: ENSMUSP00000156341   ⟸   ENSMUST00000143460
Ensembl Acc Id: ENSMUSP00000014917   ⟸   ENSMUST00000014917
DSL   EGF-like   Notch ligand N-terminal

Name Modeler Protein Id AA Range Protein Structure
AF-Q61483-F1-model_v2 AlphaFold Q61483 1-722 view protein structure

RGD ID:6828007
Promoter ID:MM_KWN:22219
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Liver
Transcripts:OTTMUST00000049751
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361715,505,871 - 15,506,371 (-)MPROMDB
RGD ID:6828008
Promoter ID:MM_KWN:22221
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:ES_Cell
Transcripts:OTTMUST00000049749
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361715,511,376 - 15,511,876 (-)MPROMDB
RGD ID:6828005
Promoter ID:MM_KWN:22222
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   Spleen
Transcripts:OTTMUST00000049746,   OTTMUST00000049748
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361715,512,236 - 15,513,392 (-)MPROMDB
RGD ID:6828006
Promoter ID:MM_KWN:22223
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:ES_Cell
Transcripts:OTTMUST00000049747
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361715,513,516 - 15,514,016 (-)MPROMDB


1 to 40 of 40 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000014773 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000014917 ENTREZGENE
  ENSMUST00000014917.8 UniProtKB/Swiss-Prot
Gene3D-CATH 2.10.25.140 UniProtKB/Swiss-Prot
  2.60.40.3510 UniProtKB/Swiss-Prot
  Laminin UniProtKB/Swiss-Prot
InterPro DSL UniProtKB/Swiss-Prot
  EGF-like_Ca-bd_dom UniProtKB/Swiss-Prot
  EGF-like_dom UniProtKB/Swiss-Prot
  EGF-type_Asp/Asn_hydroxyl_site UniProtKB/Swiss-Prot
  EGF_Ca-bd_CS UniProtKB/Swiss-Prot
  Growth_fac_rcpt_cys_sf UniProtKB/Swiss-Prot
  Notch_Cell-Fate_Det UniProtKB/Swiss-Prot
  Notch_ligand_N UniProtKB/Swiss-Prot
KEGG Report mmu:13388 UniProtKB/Swiss-Prot
MGD MGI:104659 ENTREZGENE
NCBI Gene 13388 ENTREZGENE
PANTHER CRUMBS FAMILY MEMBER UniProtKB/Swiss-Prot
Pfam DL-JAG_EGF-like UniProtKB/Swiss-Prot
  DSL UniProtKB/Swiss-Prot
  EGF UniProtKB/Swiss-Prot
  MNNL UniProtKB/Swiss-Prot
PhenoGen Dll1 PhenoGen
PRINTS EGFBLOOD UniProtKB/Swiss-Prot
PROSITE ASX_HYDROXYL UniProtKB/Swiss-Prot
  DSL UniProtKB/Swiss-Prot
  EGF_1 UniProtKB/Swiss-Prot
  EGF_2 UniProtKB/Swiss-Prot
  EGF_3 UniProtKB/Swiss-Prot
  EGF_CA UniProtKB/Swiss-Prot
SMART DSL UniProtKB/Swiss-Prot
  EGF UniProtKB/Swiss-Prot
  EGF_CA UniProtKB/Swiss-Prot
Superfamily-SCOP EGF/Laminin UniProtKB/Swiss-Prot
  SSF57184 UniProtKB/Swiss-Prot
UniProt A0A338P7A6_MOUSE UniProtKB/TrEMBL
  DLL1_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q6PFV7 ENTREZGENE
  Q99N81_MOUSE UniProtKB/TrEMBL
UniProt Secondary Q6PFV7 UniProtKB/Swiss-Prot
1 to 40 of 40 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-10-31 Dll1  delta like canonical Notch ligand 1    delta-like 1 (Drosophila)  Symbol and/or name change 5135510 APPROVED