Foxp1 (forkhead box P1) - Rat Genome Database
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Gene: Foxp1 (forkhead box P1) Mus musculus
Analyze
Symbol: Foxp1
Name: forkhead box P1
RGD ID: 1318577
MGI Page MGI
Description: Exhibits several functions, including DNA-binding transcription repressor activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; and identical protein binding activity. Involved in several processes, including animal organ development; positive regulation of cell population proliferation; and regulation of transcription by RNA polymerase II. Localizes to nucleus. Is expressed in several structures, including brain; branchial arch; embryo mesenchyme; genitourinary system; and musculoskeletal system. Human ortholog(s) of this gene implicated in several diseases, including Barrett's esophagus; esophagus adenocarcinoma; intellectual disability-severe speech delay-mild dysmorphism syndrome; peritonitis; and schizophrenia. Orthologous to human FOXP1 (forkhead box P1); INTERACTS WITH (S)-nicotine; 1,2-dichloroethane; 2,2',4,4',5,5'-hexachlorobiphenyl.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 3110052D19Rik; 4932443N09Rik; AI461938; AW494214; forkhead box protein P1; forkhead-related transcription factor 1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39698,902,303 - 99,510,587 (-)NCBIGRCm39mm39
GRCm38698,925,342 - 99,522,746 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl698,925,338 - 99,522,721 (-)EnsemblGRCm38mm10GRCm38
MGSCv37698,880,084 - 99,113,012 (-)NCBIGRCm37mm9NCBIm37
MGSCv36698,895,553 - 99,128,481 (-)NCBImm8
Celera6100,793,018 - 101,026,348 (-)NCBICelera
Cytogenetic Map6D3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-catechin  (ISO)
(-)-demecolcine  (ISO)
(-)-epigallocatechin 3-gallate  (ISO)
(S)-nicotine  (EXP)
1,2-dichloroethane  (EXP)
17beta-estradiol  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (EXP)
2,2',5,5'-tetrachlorobiphenyl  (EXP,ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (ISO)
2,4-dinitrotoluene  (ISO)
2,6-dinitrotoluene  (ISO)
2-butoxyethanol  (EXP)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4-hydroxynon-2-enal  (EXP)
4-vinylcyclohexene dioxide  (EXP)
acrolein  (ISO)
acrylamide  (ISO)
aflatoxin B1  (EXP,ISO)
aldehydo-D-glucose  (ISO)
all-trans-retinoic acid  (ISO)
alpha-pinene  (ISO)
amphetamine  (ISO)
Aroclor 1254  (EXP)
arsane  (ISO)
arsenic atom  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
Benzo[k]fluoranthene  (EXP)
bis(2-ethylhexyl) phthalate  (EXP)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
carbon nanotube  (EXP)
chromium(6+)  (ISO)
cisplatin  (ISO)
copper(II) sulfate  (ISO)
crocidolite asbestos  (EXP)
cyclosporin A  (ISO)
D-glucose  (ISO)
dexamethasone  (EXP,ISO)
dibutyl phthalate  (EXP)
disodium selenite  (ISO)
diuron  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
ethanol  (EXP)
folic acid  (EXP)
formaldehyde  (ISO)
gentamycin  (ISO)
glucose  (ISO)
hydralazine  (ISO)
indometacin  (ISO)
ionomycin  (ISO)
leflunomide  (ISO)
menadione  (ISO)
methapyrilene  (ISO)
methoxychlor  (EXP)
methylmercury chloride  (ISO)
morphine  (EXP)
nicotine  (EXP)
oxaliplatin  (ISO)
ozone  (ISO)
paracetamol  (EXP,ISO)
PCB138  (EXP,ISO)
phenobarbital  (EXP)
phenylmercury acetate  (ISO)
pirinixic acid  (EXP,ISO)
potassium chromate  (ISO)
propiconazole  (EXP)
quercetin  (ISO)
rifampicin  (ISO)
rotenone  (ISO)
SB 431542  (ISO)
silver atom  (EXP,ISO)
silver(0)  (EXP,ISO)
sirolimus  (ISO)
sodium arsenate  (EXP)
Stanolone benzoate  (ISO)
succimer  (EXP)
tetrachloromethane  (EXP)
titanium dioxide  (EXP)
topotecan  (ISO)
triclosan  (ISO)
troglitazone  (EXP)
tungsten  (EXP)
valproic acid  (EXP,ISO)
vinclozolin  (ISO)
vincristine  (ISO)
wortmannin  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
cardiac muscle cell differentiation  (IMP)
cellular response to DNA damage stimulus  (ISO)
cellular response to ionomycin  (ISO)
cellular response to tumor necrosis factor  (ISO)
circulatory system development  (IGI,IMP)
endothelial cell activation  (ISO)
forebrain development  (ISO)
heart development  (IMP)
immunoglobulin V(D)J recombination  (IMP)
in utero embryonic development  (IMP)
innate vocalization behavior  (IMP)
lung development  (IGI)
lung secretory cell differentiation  (IGI)
macrophage activation  (ISO)
monocyte activation  (ISO)
motor neuron axon guidance  (IMP)
negative regulation of androgen receptor signaling pathway  (ISO)
negative regulation of B cell apoptotic process  (ISO)
negative regulation of cell growth involved in cardiac muscle cell development  (ISO)
negative regulation of gene expression  (ISO)
negative regulation of lung goblet cell differentiation  (IGI)
negative regulation of transcription by RNA polymerase II  (IBA,IDA,IGI,ISO)
negative regulation of transcription, DNA-templated  (IDA,ISO)
osteoclast development  (ISO)
osteoclast differentiation  (ISO)
positive regulation of B cell receptor signaling pathway  (ISO)
positive regulation of endothelial cell migration  (ISO)
positive regulation of epithelial cell proliferation  (IGI)
positive regulation of hydrogen peroxide-induced cell death  (ISO)
positive regulation of immunoglobulin production  (IMP)
positive regulation of mesenchymal cell proliferation  (IGI)
positive regulation of smooth muscle cell proliferation  (ISO)
positive regulation of transcription by RNA polymerase II  (IMP)
positive regulation of transcription, DNA-templated  (IMP)
pre-B cell differentiation  (IMP)
regulation of action potential  (IMP)
regulation of cardiac muscle cell proliferation  (IGI,IMP)
regulation of chemokine (C-X-C motif) ligand 2 production  (ISO)
regulation of defense response to bacterium  (ISO)
regulation of endothelial tube morphogenesis  (ISO)
regulation of gene expression  (ISO)
regulation of inflammatory response  (ISO)
regulation of interleukin-1 beta production  (ISO)
regulation of interleukin-12 production  (ISO)
regulation of lung goblet cell differentiation  (IGI)
regulation of macrophage colony-stimulating factor production  (ISO)
regulation of monocyte differentiation  (ISO)
regulation of transcription by RNA polymerase II  (IBA)
regulation of transcription, DNA-templated  (IEA)
regulation of tumor necrosis factor production  (ISO)
response to lipopolysaccharide  (ISO)
response to testosterone  (ISO)
sarcomere organization  (IGI)
skeletal muscle tissue development  (IGI)
smooth muscle tissue development  (IGI)
striatum development  (ISO)
T follicular helper cell differentiation  (IDA)
ventral spinal cord development  (IEP)

Cellular Component
cytoplasm  (ISO)
nucleoplasm  (ISO)
nucleus  (IBA,IC,IDA,ISO)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal B cell differentiation  (IAGP)
abnormal B cell physiology  (IAGP)
abnormal branching involved in lung morphogenesis  (IAGP)
abnormal cardiac outflow tract development  (IAGP)
abnormal esophageal smooth muscle morphology  (IAGP)
abnormal esophagus development  (IAGP)
abnormal facial morphology  (IEA)
abnormal fetal cardiomyocyte proliferation  (IAGP)
abnormal heart development  (IAGP)
abnormal lung development  (IAGP)
abnormal respiratory system development  (IAGP)
abnormal respiratory system physiology  (IAGP)
abnormal sarcomere morphology  (IAGP)
abnormal T cell activation  (IAGP)
arrested B cell differentiation  (IAGP)
conotruncal ridge hyperplasia  (IAGP)
decreased CD4-positive, alpha beta T cell number  (IAGP)
decreased CD8-positive, alpha-beta T cell number  (IAGP)
decreased club cell number  (IAGP)
decreased embryo size  (IAGP)
decreased heart rate  (IAGP)
decreased lung weight  (IAGP)
decreased mature B cell number  (IAGP)
decreased mesenchymal cell proliferation involved in lung development  (IAGP)
decreased total body fat amount  (IEA)
dilated esophagus  (IAGP)
dilated respiratory conducting tubes  (IAGP)
disorganized myocardium  (IAGP)
double outlet right ventricle  (IAGP)
embryonic lethality, complete penetrance  (IAGP)
hemorrhage  (IAGP)
hydrops fetalis  (IAGP)
hyperactivity  (IEA)
increased atrioventricular cushion size  (IAGP)
increased fetal cardiomyocyte proliferation  (IAGP)
increased lean body mass  (IEA)
increased susceptibility to injury  (IAGP)
increased T cell apoptosis  (IAGP)
irregular heartbeat  (IAGP)
lethality throughout fetal growth and development, complete penetrance  (IAGP)
lethality throughout fetal growth and development, incomplete penetrance  (IAGP)
neonatal lethality, complete penetrance  (IAGP)
perinatal lethality, complete penetrance  (IAGP)
persistent truncus arteriosis  (IAGP)
prenatal lethality, incomplete penetrance  (IAGP)
preweaning lethality, complete penetrance  (IEA)
respiratory distress  (IAGP)
small lung  (IAGP)
thick interventricular septum  (IAGP)
thick ventricular wall  (IAGP)
thin myocardium  (IAGP)
thin ventricle myocardium compact layer  (IAGP)
thin ventricular wall  (IAGP)
ventricular septal defect  (IAGP)
References

References - curated
1. Ahmed HH, etal., Toxicol Mech Methods. 2014 Sep 4:1-10.
2. Arai A, etal., Brain Res. 2012 Aug 27;1470:89-97. doi: 10.1016/j.brainres.2012.06.009. Epub 2012 Jul 1.
3. Athanasiadou S, etal., PLoS One. 2011;6(6):e20771. doi: 10.1371/journal.pone.0020771. Epub 2011 Jun 16.
4. Becker J, etal., Cancer Med. 2015 Nov;4(11):1700-4. doi: 10.1002/cam4.500. Epub 2015 Aug 15.
5. Chang SW, etal., Hum Mutat. 2013 Sep;34(9):1226-30. doi: 10.1002/humu.22366. Epub 2013 Jul 11.
6. Desplats PA, etal., J Neurochem. 2006 Feb;96(3):743-57. Epub 2006 Jan 9.
7. Gambetta K, etal., Am J Physiol Heart Circ Physiol. 2008 May;294(5):H2268-75. doi: 10.1152/ajpheart.91494.2007. Epub 2008 Mar 14.
8. Hannenhalli S, etal., Circulation. 2006 Sep 19;114(12):1269-76. Epub 2006 Sep 4.
9. Ingason A, etal., Transl Psychiatry. 2015 Oct 13;5:e656. doi: 10.1038/tp.2015.151.
10. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
11. MGD data from the GO Consortium
12. MGD IEA
13. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
14. OMIM Disease Annotation Pipeline
15. Palles C, etal., Gastroenterology. 2015 Feb;148(2):367-78. doi: 10.1053/j.gastro.2014.10.041. Epub 2014 Nov 5.
16. RGD automated import pipeline
17. RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
18. RGD automated import pipeline for gene-chemical interactions
19. Shi C, etal., Blood. 2008 Dec 1;112(12):4699-711. doi: 10.1182/blood-2008-01-137018. Epub 2008 Sep 17.
20. Shimizu K, etal., Cancer Lett. 2006 May 18;236(2):186-90. Epub 2005 Jul 14.
21. Tajiri N, etal., CNS Neurosci Ther. 2016 Apr;22(4):306-15. doi: 10.1111/cns.12501. Epub 2016 Feb 4.
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10512203   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11358962   PMID:12477932   PMID:12520002   PMID:12687690   PMID:12711548   PMID:14516685  
PMID:14610273   PMID:14701752   PMID:14704420   PMID:14980377   PMID:15269172   PMID:15342473   PMID:15618518   PMID:15782199   PMID:15840001   PMID:15944189   PMID:15964824   PMID:16141072  
PMID:16141073   PMID:16376864   PMID:16387638   PMID:16602821   PMID:16783635   PMID:16819554   PMID:16919269   PMID:17428829   PMID:17619227   PMID:18033766   PMID:18199763   PMID:18206388  
PMID:18270576   PMID:18287559   PMID:18347093   PMID:18469343   PMID:18662545   PMID:18667151   PMID:18799476   PMID:18799693   PMID:18818591   PMID:19007770   PMID:19030180   PMID:19109910  
PMID:19136970   PMID:19208224   PMID:19386638   PMID:19403835   PMID:19463901   PMID:19538736   PMID:19605412   PMID:19709628   PMID:19797899   PMID:19800948   PMID:19965654   PMID:20056137  
PMID:20059953   PMID:20145110   PMID:20175877   PMID:20181597   PMID:20185820   PMID:20211142   PMID:20364144   PMID:20412781   PMID:20457810   PMID:20711475   PMID:20713518   PMID:20826310  
PMID:20943929   PMID:21248112   PMID:21267068   PMID:21338882   PMID:21364975   PMID:21368052   PMID:21532575   PMID:21532733   PMID:21652654   PMID:21677750   PMID:21873635   PMID:21924763  
PMID:21940705   PMID:21943603   PMID:22017987   PMID:22036570   PMID:22036571   PMID:22115757   PMID:22266795   PMID:22278924   PMID:22278926   PMID:22492998   PMID:22516202   PMID:22522401  
PMID:22542185   PMID:22629237   PMID:22675208   PMID:22696295   PMID:22833130   PMID:22836272   PMID:22922362   PMID:23103965   PMID:23359544   PMID:23499385   PMID:23604909   PMID:23610558  
PMID:23622242   PMID:23684982   PMID:23832113   PMID:23946441   PMID:23988635   PMID:24023716   PMID:24056077   PMID:24082127   PMID:24274029   PMID:24347548   PMID:24586749   PMID:24776795  
PMID:24859450   PMID:24948600   PMID:24952961   PMID:24982181   PMID:25070536   PMID:25108913   PMID:25112678   PMID:25238097   PMID:25266127   PMID:25516972   PMID:25527076   PMID:25673830  
PMID:25725069   PMID:25737280   PMID:25804738   PMID:25826454   PMID:25843547   PMID:25868900   PMID:25936505   PMID:25943695   PMID:25948253   PMID:25975898   PMID:26010426   PMID:26021489  
PMID:26071365   PMID:26171970   PMID:26186188   PMID:26187199   PMID:26235615   PMID:26245956   PMID:26329601   PMID:26335645   PMID:26395878   PMID:26490861   PMID:26494785   PMID:26504089  
PMID:26542008   PMID:26633881   PMID:26718003   PMID:26779814   PMID:26824659   PMID:26904955   PMID:26969076   PMID:27001958   PMID:27088802   PMID:27154297   PMID:27210758   PMID:27282384  
PMID:27341756   PMID:27348588   PMID:27383233   PMID:27452460   PMID:27466379   PMID:27477290   PMID:27568519   PMID:27588474   PMID:27664421   PMID:27851915   PMID:27856909   PMID:28190640  
PMID:28204507   PMID:28213137   PMID:28240601   PMID:28262664   PMID:28384713   PMID:28550168   PMID:28591638   PMID:28595615   PMID:28768199   PMID:28811488   PMID:28921616   PMID:28978667  
PMID:29018172   PMID:29069594   PMID:29138280   PMID:29141232   PMID:29212910   PMID:29255003   PMID:29363583   PMID:29379870   PMID:29444423   PMID:29507226   PMID:29513653   PMID:29659809  
PMID:29967281   PMID:30031127   PMID:30104377   PMID:30111840   PMID:30124790   PMID:30302539   PMID:30311912   PMID:30367168   PMID:30523786   PMID:30643266   PMID:30658714   PMID:30846445  
PMID:30902550   PMID:30914320   PMID:31073041   PMID:31076274   PMID:31077741   PMID:31125332   PMID:31152445   PMID:31177814   PMID:31235696   PMID:31240265   PMID:31305241   PMID:31318658  
PMID:31427287   PMID:31491374   PMID:31578231   PMID:31597102   PMID:31611379   PMID:31680852   PMID:31699980   PMID:31712577   PMID:31822965   PMID:31969659   PMID:31995756   PMID:32049024  
PMID:32130906   PMID:32170006   PMID:32518258   PMID:32561725   PMID:33046550  


Genomics

Comparative Map Data
Foxp1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39698,902,303 - 99,510,587 (-)NCBIGRCm39mm39
GRCm38698,925,342 - 99,522,746 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl698,925,338 - 99,522,721 (-)EnsemblGRCm38mm10GRCm38
MGSCv37698,880,084 - 99,113,012 (-)NCBIGRCm37mm9NCBIm37
MGSCv36698,895,553 - 99,128,481 (-)NCBImm8
Celera6100,793,018 - 101,026,348 (-)NCBICelera
Cytogenetic Map6D3NCBI
FOXP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl370,954,708 - 71,583,989 (-)EnsemblGRCh38hg38GRCh38
GRCh38.p13 Ensembl370,952,817 - 71,583,989 (-)EnsemblGRCh38hg38GRCh38
GRCh38.p13 Ensembl370,952,817 - 71,583,993 (-)EnsemblGRCh38hg38GRCh38
GRCh38370,954,708 - 71,583,983 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37371,003,859 - 71,633,129 (-)NCBIGRCh37GRCh37hg19GRCh37
GRCh37371,003,865 - 71,633,140 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36371,087,426 - 71,715,830 (-)NCBINCBI36hg18NCBI36
Build 34371,087,426 - 71,715,830NCBI
Celera370,931,660 - 71,563,756 (-)NCBI
Cytogenetic Map3p13NCBI
HuRef371,002,782 - 71,635,428 (-)NCBIHuRef
CHM1_1370,955,452 - 71,584,748 (-)NCBICHM1_1
Foxp1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.24131,559,599 - 132,155,092 (-)NCBI
Rnor_6.0 Ensembl4131,366,744 - 131,694,755 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.04131,362,178 - 131,963,466 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04195,854,029 - 196,362,864 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44133,773,373 - 134,007,018 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.14134,017,481 - 134,251,846 (-)NCBI
Celera4120,424,629 - 120,655,076 (-)NCBICelera
Cytogenetic Map4q34NCBI
Foxp1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495542116,595,445 - 17,075,923 (+)NCBIChiLan1.0ChiLan1.0
FOXP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1372,255,364 - 72,878,625 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl372,258,456 - 72,498,173 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0370,893,933 - 71,523,892 (-)NCBIMhudiblu_PPA_v0panPan3
FOXP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl2020,788,433 - 21,016,397 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.12020,438,631 - 21,020,516 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Foxp1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049366032,631,781 - 3,146,104 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FOXP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1352,347,849 - 52,974,261 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11352,346,844 - 52,974,358 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21357,861,735 - 58,095,301 (-)NCBISscrofa10.2Sscrofa10.2susScr3
FOXP1
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12231,907,941 - 32,538,294 (-)NCBI
Foxp1
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247735,543,529 - 6,076,522 (-)NCBI

Position Markers
AW494214  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38698,926,406 - 98,926,500UniSTSGRCm38
MGSCv37698,876,400 - 98,876,494UniSTSGRCm37
Celera6100,789,334 - 100,789,428UniSTS
Cytogenetic Map6E1UniSTS
Whitehead/MRC_RH61005.99UniSTS
D6Mit103  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38698,993,988 - 98,994,106UniSTSGRCm38
MGSCv37698,943,982 - 98,944,100UniSTSGRCm37
Celera6100,856,726 - 100,856,830UniSTS
Cytogenetic Map6E1UniSTS
cM Map645.0UniSTS
Whitehead Genetic639.3UniSTS
AI461938  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38698,927,502 - 98,927,608UniSTSGRCm38
MGSCv37698,877,496 - 98,877,602UniSTSGRCm37
Celera6100,790,430 - 100,790,536UniSTS
Cytogenetic Map6E1UniSTS
Whitehead/MRC_RH61006.96UniSTS
Foxp1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
MGSCv37698,879,562 - 98,879,622UniSTSGRCm37
Celera6100,792,496 - 100,792,556UniSTS
cM Map6 UniSTS
WI-17713  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38698,926,796 - 98,926,967UniSTSGRCm38
MGSCv37698,876,790 - 98,876,961UniSTSGRCm37
Celera6100,789,724 - 100,789,895UniSTS
Cytogenetic Map6E1UniSTS
Foxp1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38698,929,568 - 98,929,628UniSTSGRCm38
MGSCv37698,879,562 - 98,879,622UniSTSGRCm37
Celera6100,792,496 - 100,792,556UniSTS
Cytogenetic Map6E1UniSTS
cM Map6 UniSTS
Foxp1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map6E1UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
25440480Moaq2_mmodifier of alien QTL 2 (mouse)61117500000Mouse
26884414Bzwq12_mbi-zygomatic width QTL 12, 16 week (mouse)63400000139100000Mouse
10412157Fl1n_mfatty liver 1 in NSY (mouse)Not determined645314059128835032Mouse
4142259Tabw2_mtally ho associated body weight 2 (mouse)Not determined46935985136423692Mouse
25314319Histh6_mhistamine hypersensitivity 6 (mouse)648720000125360000Mouse
25314320Histh5_mhistamine hypersensitivity 5 (mouse)648720000148450000Mouse
1301962Eila2_methanol induced locomotor activity 2 (mouse)Not determined648726556125356785Mouse
1357683Igf1sl1_mIGF-1 serum levels 1 (mouse)Not determined652161713116155267Mouse
1300650Bw18_mbody weight QTL 18 (mouse)Not determined666713869100714031Mouse
1301876Bits2_mbitterness sensitivity 2 (mouse)Not determined670425898104426034Mouse
1301813Skl3_mskeletal size (tail length) 3 (mouse)Not determined670425898104426034Mouse
1301034Egrm2_mearly growth rate (mouse)Not determined670425898104426034Mouse
1300869Stheal5_msoft tissue heal 5 (mouse)Not determined671575060105575178Mouse
1300954Fcsa1_mfemoral cross-sectional area 1 (mouse)Not determined671981024105981170Mouse
1301521Pas1c_mpulmonary adenoma susceptibility 1c (mouse)Not determined671981024105981170Mouse
13506930Recrq9_mrecombination rate in male meiosis QTL 9 (mouse)673500000134700000Mouse
1301320Ots1_movarian teratoma susceptibility 1 (mouse)Not determined675447583104503555Mouse
10043901Pfat5_mpredicted fat percentage 5 (mouse)Not determined675607306109607450Mouse
10412208Cypr4_mcytokine production 4 (mouse)Not determined675716503109716697Mouse
1357875Pfat2_mpredicted fat percentage 2 (mouse)Not determined676463949110464093Mouse
4141376Dbm1_mdiabetes modifier 1 (mouse)Not determined678629504121115387Mouse
14696731Pairq1_mP. aeruginosa infection resistance QTL 1 (mouse)681500000102200000Mouse
10043864T2dm4sa_mtype 2 diabetes mellitus 4 in SMXA RI mice (mouse)Not determined683713869147052561Mouse
11251720Ewc4_methanol withdrawal and consumption 4 (mouse)684122513118122513Mouse
1301687Mnic2_mmacronutrient intake (mouse)Not determined686806805113544602Mouse
1301744Hdlq11_mHDL QTL 11 (mouse)Not determined687503360121503555Mouse
1301262Gasa3_mgastritis type A susceptibility locus 3 (mouse)Not determined689005405123005603Mouse
1301244Ichs_mimmediate cutaneous hypersensitivity QTL (mouse)Not determined690795610124795846Mouse
4141578Obrq1_mobesity resistance QTL 1 (mouse)Not determined92607306112004738Mouse
11353842Bmiq4_mbody mass index QTL 4 (mouse)692607306146429238Mouse
1301292Cfbw2_mcystic fibrosis body weight 2 (mouse)Not determined695004651129004738Mouse
1300704Cia3_mcollagen induced arthritis QTL 3 (mouse)Not determined696347325130347522Mouse
11040599Lmr4b_mleishmaniasis resistance 4b (mouse)696347325130347522Mouse
4141940W6q5_mweight 6 weeks QTL 5 (mouse)Not determined96655951146633626Mouse
4142416Egq11_mearly growth QTL 11 (mouse)Not determined96655951146633626Mouse
1357555Tesq2_mtestis weight QTL 2 (mouse)Not determined696655951146633626Mouse
10043923Bhr7_mbronchial hyperresponsiveness 7 (mouse)Not determined698242853132242977Mouse
1301518Bbaa5_mB.burgdorferi-associated arthritis 5 (mouse)Not determined698506837145935444Mouse
1301923Lith6_mlithogenic gene 6 (mouse)Not determined698717516132717715Mouse
1301915Chab3_mcholesterol absorption 3 (mouse)Not determined698931748132940036Mouse
1302131Bmd8_mbone mineral density 8 (mouse)Not determined699155128133155267Mouse

miRNA Target Status

Confirmed Target Of
miRNA GeneMature miRNAMethod NameResult TypeData TypeSupport TypePMID
Mir17mmu-miR-17-5pMirtarbaseexternal_infoReporter assayFunctional MTI21248104
Mir34ammu-miR-34a-5pMirtarbaseexternal_infoWestern blotFunctional MTI20598588
Mir34ammu-miR-34a-5pTarbaseexternal_infoWesternblitPOSITIVE
Mir34ammu-miR-34a-5pOncomiRDBexternal_infoNANA21460242
Mir504mmu-miR-504-5pOncomiRDBexternal_infoNANA21927029
Mir128-2mmu-miR-128-3pMirtarbaseexternal_infoReporter assayFunctional MTI21248104
Mir128-2mmu-miR-128-3pTarbaseexternal_infoReporter GenePOSITIVE
Mir128-1mmu-miR-128-3pMirtarbaseexternal_infoReporter assayFunctional MTI21248104
Mir128-1mmu-miR-128-3pTarbaseexternal_infoReporter GenePOSITIVE

Predicted Target Of
Summary Value
Count of predictions:6295
Count of miRNA genes:966
Interacting mature miRNAs:1414
Transcripts:ENSMUST00000074346, ENSMUST00000075832, ENSMUST00000113321, ENSMUST00000113322, ENSMUST00000113324, ENSMUST00000113326, ENSMUST00000113328, ENSMUST00000113329, ENSMUST00000123992, ENSMUST00000124058, ENSMUST00000131967, ENSMUST00000138754, ENSMUST00000142164, ENSMUST00000154163, ENSMUST00000175670, ENSMUST00000175838, ENSMUST00000175880, ENSMUST00000175886, ENSMUST00000176105, ENSMUST00000176148, ENSMUST00000176565, ENSMUST00000176632, ENSMUST00000176850, ENSMUST00000177208, ENSMUST00000177227, ENSMUST00000177229, ENSMUST00000177230, ENSMUST00000177235, ENSMUST00000177307, ENSMUST00000177410, ENSMUST00000177437, ENSMUST00000177507
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001197321 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001197322 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001347345 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_053202 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505308 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505310 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505311 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505312 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505313 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505314 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505315 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505316 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505319 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505320 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505321 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505322 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505323 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017321301 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017321302 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017321303 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017321304 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017321305 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017321306 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030255061 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030255062 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030255063 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030255064 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030255065 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030255066 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030255067 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030255068 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030255069 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030255070 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030255071 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030255074 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036165728 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036165729 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036165730 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036165731 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036165732 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036165733 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003956146 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004942888 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004942889 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004942890 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AA451299 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB221601 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB221602 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB594192 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC125137 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC132579 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC152987 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC155839 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC163199 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF339103 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF339104 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF339105 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI508521 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK014203 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK031837 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK033368 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK033622 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK037790 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK040800 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK046104 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK051083 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK051887 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK052184 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK077062 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK087357 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK087748 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK139831 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK144920 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK157606 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK160315 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK169176 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK171994 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK190196 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC064764 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC065386 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466523 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EF410101 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000074346   ⟹   ENSMUSP00000073953
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl698,930,090 - 99,163,018 (-)Ensembl
RefSeq Acc Id: ENSMUST00000075832
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl699,152,058 - 99,266,515 (-)Ensembl
RefSeq Acc Id: ENSMUST00000113321
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl699,006,685 - 99,028,266 (-)Ensembl
RefSeq Acc Id: ENSMUST00000113322   ⟹   ENSMUSP00000108948
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl698,925,342 - 99,435,345 (-)Ensembl
RefSeq Acc Id: ENSMUST00000113324   ⟹   ENSMUSP00000108950
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl698,930,090 - 99,163,018 (-)Ensembl
RefSeq Acc Id: ENSMUST00000113326   ⟹   ENSMUSP00000108952
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl698,925,338 - 99,266,515 (-)Ensembl
RefSeq Acc Id: ENSMUST00000113328   ⟹   ENSMUSP00000108954
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl698,930,090 - 99,163,018 (-)Ensembl
RefSeq Acc Id: ENSMUST00000113329   ⟹   ENSMUSP00000108955
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl698,930,090 - 99,163,018 (-)Ensembl
RefSeq Acc Id: ENSMUST00000123992   ⟹   ENSMUSP00000117550
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl699,003,393 - 99,044,459 (-)Ensembl
RefSeq Acc Id: ENSMUST00000124058   ⟹   ENSMUSP00000120244
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl698,945,534 - 99,028,313 (-)Ensembl
RefSeq Acc Id: ENSMUST00000131967
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl699,161,940 - 99,266,532 (-)Ensembl
RefSeq Acc Id: ENSMUST00000138754
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl699,161,940 - 99,266,532 (-)Ensembl
RefSeq Acc Id: ENSMUST00000142164
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl698,952,201 - 99,003,680 (-)Ensembl
RefSeq Acc Id: ENSMUST00000154163   ⟹   ENSMUSP00000121404
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl699,003,200 - 99,028,942 (-)Ensembl
RefSeq Acc Id: ENSMUST00000175670   ⟹   ENSMUSP00000135237
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl699,016,550 - 99,027,991 (-)Ensembl
RefSeq Acc Id: ENSMUST00000175838
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl699,435,236 - 99,522,721 (-)Ensembl
RefSeq Acc Id: ENSMUST00000175880
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl698,930,171 - 98,935,545 (-)Ensembl
RefSeq Acc Id: ENSMUST00000175886   ⟹   ENSMUSP00000135517
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl699,009,933 - 99,096,205 (-)Ensembl
RefSeq Acc Id: ENSMUST00000176105
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl699,308,377 - 99,436,396 (-)Ensembl
RefSeq Acc Id: ENSMUST00000176565   ⟹   ENSMUSP00000135181
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl698,929,189 - 99,520,997 (-)Ensembl
RefSeq Acc Id: ENSMUST00000176632   ⟹   ENSMUSP00000135635
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl698,930,090 - 99,435,345 (-)Ensembl
RefSeq Acc Id: ENSMUST00000176850   ⟹   ENSMUSP00000135041
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl698,930,090 - 99,435,345 (-)Ensembl
RefSeq Acc Id: ENSMUST00000177208   ⟹   ENSMUSP00000135187
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl699,075,962 - 99,248,336 (-)Ensembl
RefSeq Acc Id: ENSMUST00000177227   ⟹   ENSMUSP00000135229
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl699,162,929 - 99,521,162 (-)Ensembl
RefSeq Acc Id: ENSMUST00000177229   ⟹   ENSMUSP00000134817
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl698,930,090 - 99,028,259 (-)Ensembl
RefSeq Acc Id: ENSMUST00000177230   ⟹   ENSMUSP00000135098
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl698,930,090 - 99,163,018 (-)Ensembl
RefSeq Acc Id: ENSMUST00000177235
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl699,260,357 - 99,522,647 (-)Ensembl
RefSeq Acc Id: ENSMUST00000177307   ⟹   ENSMUSP00000135764
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl698,930,090 - 99,163,018 (-)Ensembl
RefSeq Acc Id: ENSMUST00000177410
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl698,925,415 - 98,929,785 (-)Ensembl
RefSeq Acc Id: ENSMUST00000177437   ⟹   ENSMUSP00000135809
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl698,929,466 - 99,028,258 (-)Ensembl
RefSeq Acc Id: ENSMUST00000177507   ⟹   ENSMUSP00000134869
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl699,009,944 - 99,044,442 (-)Ensembl
RefSeq Acc Id: NM_001197321   ⟹   NP_001184250
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,243,476 (-)NCBI
GRCm38698,925,342 - 99,266,515 (-)NCBI
Celera6100,788,270 - 101,299,156 (-)ENTREZGENE
cM Map6 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001197322   ⟹   NP_001184251
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,005,259 (-)NCBI
GRCm38698,925,342 - 99,028,298 (-)NCBI
Celera6100,788,270 - 101,299,156 (-)ENTREZGENE
cM Map6 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001347345   ⟹   NP_001334274
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,497,954 (-)NCBI
GRCm38698,925,342 - 99,520,993 (-)NCBI
Sequence:
RefSeq Acc Id: NM_053202   ⟹   NP_444432
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,412,306 (-)NCBI
GRCm38698,925,342 - 99,435,345 (-)NCBI
MGSCv37698,880,084 - 99,113,012 (-)RGD
Celera6100,788,270 - 101,299,156 (-)ENTREZGENE
cM Map6 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006505308   ⟹   XP_006505371
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,499,705 (-)NCBI
GRCm38698,925,342 - 99,522,741 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006505310   ⟹   XP_006505373
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,316,386 (-)NCBI
GRCm38698,925,342 - 99,339,441 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006505311   ⟹   XP_006505374
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,243,560 (-)NCBI
GRCm38698,925,342 - 99,266,646 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006505312   ⟹   XP_006505375
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,243,560 (-)NCBI
GRCm38698,925,342 - 99,266,599 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006505313   ⟹   XP_006505376
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,150,339 (-)NCBI
GRCm38698,925,342 - 99,173,378 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006505314   ⟹   XP_006505377
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,499,706 (-)NCBI
GRCm38698,925,342 - 99,522,742 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006505315   ⟹   XP_006505378
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,499,706 (-)NCBI
GRCm38698,925,342 - 99,522,742 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006505316   ⟹   XP_006505379
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,499,707 (-)NCBI
GRCm38698,925,342 - 99,522,743 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006505319   ⟹   XP_006505382
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,005,898 (-)NCBI
GRCm38698,925,342 - 99,028,937 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006505320   ⟹   XP_006505383
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,030,079 (-)NCBI
GRCm38698,925,342 - 99,053,118 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006505321   ⟹   XP_006505384
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,004,947 (-)NCBI
GRCm38698,925,342 - 99,027,986 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006505322   ⟹   XP_006505385
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,005,875 (-)NCBI
GRCm38698,925,342 - 99,028,914 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006505323   ⟹   XP_006505386
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,030,079 (-)NCBI
GRCm38698,925,342 - 99,053,118 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017321301   ⟹   XP_017176790
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,499,705 (-)NCBI
GRCm38698,925,342 - 99,522,741 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017321302   ⟹   XP_017176791
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,446,391 (-)NCBI
GRCm38698,925,342 - 99,469,430 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017321303   ⟹   XP_017176792
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,499,705 (-)NCBI
GRCm38698,925,342 - 99,522,741 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017321304   ⟹   XP_017176793
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,422,623 (-)NCBI
GRCm38698,925,342 - 99,445,668 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017321305   ⟹   XP_017176794
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,074,080 (-)NCBI
GRCm38698,925,342 - 99,096,983 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017321306   ⟹   XP_017176795
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,005,279 (-)NCBI
GRCm38698,925,342 - 99,028,550 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030255061   ⟹   XP_030110921
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,179,294 (-)NCBI
GRCm38698,925,342 - 99,202,318 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030255062   ⟹   XP_030110922
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,181,415 (-)NCBI
GRCm38698,925,342 - 99,204,660 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030255063   ⟹   XP_030110923
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,181,942 (-)NCBI
GRCm38698,925,342 - 99,204,956 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030255064   ⟹   XP_030110924
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,499,706 (-)NCBI
GRCm38698,925,342 - 99,522,742 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030255065   ⟹   XP_030110925
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,499,706 (-)NCBI
GRCm38698,925,342 - 99,522,742 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030255066   ⟹   XP_030110926
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,499,706 (-)NCBI
GRCm38698,925,342 - 99,522,742 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030255067   ⟹   XP_030110927
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,179,291 (-)NCBI
GRCm38698,925,342 - 99,202,325 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030255068   ⟹   XP_030110928
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,074,726 (-)NCBI
GRCm38698,925,342 - 99,097,770 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030255069   ⟹   XP_030110929
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,074,080 (-)NCBI
GRCm38698,925,342 - 99,096,672 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030255070   ⟹   XP_030110930
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,074,080 (-)NCBI
GRCm38698,925,342 - 99,096,672 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030255071   ⟹   XP_030110931
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,005,269 (-)NCBI
GRCm38698,925,342 - 99,028,304 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030255074   ⟹   XP_030110934
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,139,990 (-)NCBI
GRCm38698,925,342 - 99,163,029 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036165728   ⟹   XP_036021621
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,510,587 (-)NCBI
RefSeq Acc Id: XM_036165729   ⟹   XP_036021622
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,499,705 (-)NCBI
RefSeq Acc Id: XM_036165730   ⟹   XP_036021623
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,475,365 (-)NCBI
RefSeq Acc Id: XM_036165731   ⟹   XP_036021624
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,499,705 (-)NCBI
RefSeq Acc Id: XM_036165732   ⟹   XP_036021625
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,510,587 (-)NCBI
RefSeq Acc Id: XM_036165733   ⟹   XP_036021626
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,005,898 (-)NCBI
RefSeq Acc Id: XR_003956146
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,005,898 (-)NCBI
GRCm38698,929,191 - 99,028,937 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004942888
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,499,710 (-)NCBI
RefSeq Acc Id: XR_004942889
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,906,981 - 99,005,269 (-)NCBI
RefSeq Acc Id: XR_004942890
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,005,269 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001184250 (Get FASTA)   NCBI Sequence Viewer  
  NP_001184251 (Get FASTA)   NCBI Sequence Viewer  
  NP_001334274 (Get FASTA)   NCBI Sequence Viewer  
  NP_444432 (Get FASTA)   NCBI Sequence Viewer  
  XP_006505371 (Get FASTA)   NCBI Sequence Viewer  
  XP_006505373 (Get FASTA)   NCBI Sequence Viewer  
  XP_006505374 (Get FASTA)   NCBI Sequence Viewer  
  XP_006505375 (Get FASTA)   NCBI Sequence Viewer  
  XP_006505376 (Get FASTA)   NCBI Sequence Viewer  
  XP_006505377 (Get FASTA)   NCBI Sequence Viewer  
  XP_006505378 (Get FASTA)   NCBI Sequence Viewer  
  XP_006505379 (Get FASTA)   NCBI Sequence Viewer  
  XP_006505382 (Get FASTA)   NCBI Sequence Viewer  
  XP_006505383 (Get FASTA)   NCBI Sequence Viewer  
  XP_006505384 (Get FASTA)   NCBI Sequence Viewer  
  XP_006505385 (Get FASTA)   NCBI Sequence Viewer  
  XP_006505386 (Get FASTA)   NCBI Sequence Viewer  
  XP_017176790 (Get FASTA)   NCBI Sequence Viewer  
  XP_017176791 (Get FASTA)   NCBI Sequence Viewer  
  XP_017176792 (Get FASTA)   NCBI Sequence Viewer  
  XP_017176793 (Get FASTA)   NCBI Sequence Viewer  
  XP_017176794 (Get FASTA)   NCBI Sequence Viewer  
  XP_017176795 (Get FASTA)   NCBI Sequence Viewer  
  XP_030110921 (Get FASTA)   NCBI Sequence Viewer  
  XP_030110922 (Get FASTA)   NCBI Sequence Viewer  
  XP_030110923 (Get FASTA)   NCBI Sequence Viewer  
  XP_030110924 (Get FASTA)   NCBI Sequence Viewer  
  XP_030110925 (Get FASTA)   NCBI Sequence Viewer  
  XP_030110926 (Get FASTA)   NCBI Sequence Viewer  
  XP_030110927 (Get FASTA)   NCBI Sequence Viewer  
  XP_030110928 (Get FASTA)   NCBI Sequence Viewer  
  XP_030110929 (Get FASTA)   NCBI Sequence Viewer  
  XP_030110930 (Get FASTA)   NCBI Sequence Viewer  
  XP_030110931 (Get FASTA)   NCBI Sequence Viewer  
  XP_030110934 (Get FASTA)   NCBI Sequence Viewer  
  XP_036021621 (Get FASTA)   NCBI Sequence Viewer  
  XP_036021622 (Get FASTA)   NCBI Sequence Viewer  
  XP_036021623 (Get FASTA)   NCBI Sequence Viewer  
  XP_036021624 (Get FASTA)   NCBI Sequence Viewer  
  XP_036021625 (Get FASTA)   NCBI Sequence Viewer  
  XP_036021626 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH64764 (Get FASTA)   NCBI Sequence Viewer  
  AAH65386 (Get FASTA)   NCBI Sequence Viewer  
  AAK69648 (Get FASTA)   NCBI Sequence Viewer  
  AAK69649 (Get FASTA)   NCBI Sequence Viewer  
  AAK69650 (Get FASTA)   NCBI Sequence Viewer  
  BAC27573 (Get FASTA)   NCBI Sequence Viewer  
  BAC28249 (Get FASTA)   NCBI Sequence Viewer  
  BAC36586 (Get FASTA)   NCBI Sequence Viewer  
  BAE26136 (Get FASTA)   NCBI Sequence Viewer  
  BAJ22962 (Get FASTA)   NCBI Sequence Viewer  
  EDK99363 (Get FASTA)   NCBI Sequence Viewer  
  P58462 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_444432   ⟸   NM_053202
- Peptide Label: isoform 1
- UniProtKB: P58462 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001184250   ⟸   NM_001197321
- Peptide Label: isoform 2
- UniProtKB: P58462 (UniProtKB/Swiss-Prot),   A0A0R4J1H9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001184251   ⟸   NM_001197322
- Peptide Label: isoform 3
- UniProtKB: P58462 (UniProtKB/Swiss-Prot),   A0A0R4J282 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006505371   ⟸   XM_006505308
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006505379   ⟸   XM_006505316
- Peptide Label: isoform X4
- UniProtKB: E2S038 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006505377   ⟸   XM_006505314
- Peptide Label: isoform X2
- UniProtKB: D3Z6Q3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006505378   ⟸   XM_006505315
- Peptide Label: isoform X3
- UniProtKB: H3BLF2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006505373   ⟸   XM_006505310
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006505374   ⟸   XM_006505311
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006505375   ⟸   XM_006505312
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006505376   ⟸   XM_006505313
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006505386   ⟸   XM_006505323
- Peptide Label: isoform X6
- UniProtKB: P58462 (UniProtKB/Swiss-Prot),   A0A0R4J282 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006505383   ⟸   XM_006505320
- Peptide Label: isoform X5
- UniProtKB: H3BJ24 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006505382   ⟸   XM_006505319
- Peptide Label: isoform X5
- UniProtKB: H3BJ24 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006505385   ⟸   XM_006505322
- Peptide Label: isoform X6
- UniProtKB: P58462 (UniProtKB/Swiss-Prot),   A0A0R4J282 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006505384   ⟸   XM_006505321
- Peptide Label: isoform X5
- UniProtKB: H3BJ24 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017176790   ⟸   XM_017321301
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_017176792   ⟸   XM_017321303
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_017176791   ⟸   XM_017321302
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_017176793   ⟸   XM_017321304
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_017176794   ⟸   XM_017321305
- Peptide Label: isoform X5
- UniProtKB: H3BJ24 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017176795   ⟸   XM_017321306
- Peptide Label: isoform X5
- UniProtKB: H3BJ24 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030110924   ⟸   XM_030255064
- Peptide Label: isoform X2
RefSeq Acc Id: XP_030110925   ⟸   XM_030255065
- Peptide Label: isoform X3
RefSeq Acc Id: XP_030110926   ⟸   XM_030255066
- Peptide Label: isoform X3
RefSeq Acc Id: NP_001334274   ⟸   NM_001347345
- Peptide Label: isoform 4
- UniProtKB: E2S038 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030110923   ⟸   XM_030255063
- Peptide Label: isoform X1
RefSeq Acc Id: XP_030110922   ⟸   XM_030255062
- Peptide Label: isoform X1
RefSeq Acc Id: XP_030110927   ⟸   XM_030255067
- Peptide Label: isoform X3
RefSeq Acc Id: XP_030110921   ⟸   XM_030255061
- Peptide Label: isoform X1
RefSeq Acc Id: XP_030110934   ⟸   XM_030255074
- Peptide Label: isoform X8
RefSeq Acc Id: XP_030110928   ⟸   XM_030255068
- Peptide Label: isoform X5
RefSeq Acc Id: XP_030110929   ⟸   XM_030255069
- Peptide Label: isoform X6
RefSeq Acc Id: XP_030110930   ⟸   XM_030255070
- Peptide Label: isoform X7
RefSeq Acc Id: XP_030110931   ⟸   XM_030255071
- Peptide Label: isoform X7
RefSeq Acc Id: ENSMUSP00000120244   ⟸   ENSMUST00000124058
RefSeq Acc Id: ENSMUSP00000134817   ⟸   ENSMUST00000177229
RefSeq Acc Id: ENSMUSP00000135229   ⟸   ENSMUST00000177227
RefSeq Acc Id: ENSMUSP00000135098   ⟸   ENSMUST00000177230
RefSeq Acc Id: ENSMUSP00000135187   ⟸   ENSMUST00000177208
RefSeq Acc Id: ENSMUSP00000135764   ⟸   ENSMUST00000177307
RefSeq Acc Id: ENSMUSP00000135809   ⟸   ENSMUST00000177437
RefSeq Acc Id: ENSMUSP00000134869   ⟸   ENSMUST00000177507
RefSeq Acc Id: ENSMUSP00000108948   ⟸   ENSMUST00000113322
RefSeq Acc Id: ENSMUSP00000108950   ⟸   ENSMUST00000113324
RefSeq Acc Id: ENSMUSP00000108955   ⟸   ENSMUST00000113329
RefSeq Acc Id: ENSMUSP00000108952   ⟸   ENSMUST00000113326
RefSeq Acc Id: ENSMUSP00000108954   ⟸   ENSMUST00000113328
RefSeq Acc Id: ENSMUSP00000073953   ⟸   ENSMUST00000074346
RefSeq Acc Id: ENSMUSP00000121404   ⟸   ENSMUST00000154163
RefSeq Acc Id: ENSMUSP00000135041   ⟸   ENSMUST00000176850
RefSeq Acc Id: ENSMUSP00000117550   ⟸   ENSMUST00000123992
RefSeq Acc Id: ENSMUSP00000135181   ⟸   ENSMUST00000176565
RefSeq Acc Id: ENSMUSP00000135635   ⟸   ENSMUST00000176632
RefSeq Acc Id: ENSMUSP00000135517   ⟸   ENSMUST00000175886
RefSeq Acc Id: ENSMUSP00000135237   ⟸   ENSMUST00000175670
RefSeq Acc Id: XP_036021625   ⟸   XM_036165732
- Peptide Label: isoform X3
RefSeq Acc Id: XP_036021621   ⟸   XM_036165728
- Peptide Label: isoform X1
RefSeq Acc Id: XP_036021622   ⟸   XM_036165729
- Peptide Label: isoform X1
RefSeq Acc Id: XP_036021624   ⟸   XM_036165731
- Peptide Label: isoform X1
RefSeq Acc Id: XP_036021623   ⟸   XM_036165730
- Peptide Label: isoform X1
RefSeq Acc Id: XP_036021626   ⟸   XM_036165733
- Peptide Label: isoform X7
Protein Domains
Fork-head   FOXP-CC

Promoters
RGD ID:6838904
Promoter ID:MM_KWN:47032
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Lung,   MEF_B6
Transcripts:UC009DBG.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36698,877,496 - 98,880,557 (-)MPROMDB
RGD ID:6839309
Promoter ID:MM_KWN:47035
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Lung,   MEF_B6,   Spleen
Transcripts:ENSMUST00000068823
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36698,953,186 - 98,954,467 (-)MPROMDB
RGD ID:6839329
Promoter ID:MM_KWN:47036
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   ES_Cell,   Lung,   MEF_B6,   Spleen
Transcripts:ENSMUST00000113321,   OTTMUST00000054490,   OTTMUST00000054491,   UC009DBH.1,   UC009DBO.1,   UC009DBP.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36698,978,246 - 98,978,967 (-)MPROMDB
RGD ID:6890532
Promoter ID:EPDNEW_M8717
Type:initiation region
Name:Foxp1_1
Description:Mus musculus forkhead box P1 , transcript variant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M8718  EPDNEW_M8719  EPDNEW_M8720  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38699,028,258 - 99,028,318EPDNEW
RGD ID:6890534
Promoter ID:EPDNEW_M8718
Type:initiation region
Name:Foxp1_3
Description:Mus musculus forkhead box P1 , transcript variant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M8717  EPDNEW_M8719  EPDNEW_M8720  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38699,266,511 - 99,266,571EPDNEW
RGD ID:6890536
Promoter ID:EPDNEW_M8719
Type:single initiation site
Name:Foxp1_4
Description:Mus musculus forkhead box P1 , transcript variant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M8717  EPDNEW_M8718  EPDNEW_M8720  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38699,518,638 - 99,518,698EPDNEW
RGD ID:6890538
Promoter ID:EPDNEW_M8720
Type:initiation region
Name:Foxp1_2
Description:Mus musculus forkhead box P1 , transcript variant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M8717  EPDNEW_M8718  EPDNEW_M8719  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38699,521,002 - 99,521,062EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1914004 AgrOrtholog
Ensembl Genes ENSMUSG00000030067 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000073953 UniProtKB/Swiss-Prot
  ENSMUSP00000108948 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000108950 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000108952 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000108954 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000108955 UniProtKB/Swiss-Prot
  ENSMUSP00000117550 UniProtKB/TrEMBL
  ENSMUSP00000120244 UniProtKB/TrEMBL
  ENSMUSP00000121404 UniProtKB/TrEMBL
  ENSMUSP00000134817 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000134869 UniProtKB/TrEMBL
  ENSMUSP00000135041 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000135098 UniProtKB/TrEMBL
  ENSMUSP00000135181 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000135187 UniProtKB/TrEMBL
  ENSMUSP00000135229 UniProtKB/TrEMBL
  ENSMUSP00000135237 UniProtKB/TrEMBL
  ENSMUSP00000135517 UniProtKB/TrEMBL
  ENSMUSP00000135635 UniProtKB/TrEMBL
  ENSMUSP00000135764 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000135809 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000074346 UniProtKB/Swiss-Prot
  ENSMUST00000113322 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000113324 UniProtKB/TrEMBL
  ENSMUST00000113326 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000113328 UniProtKB/TrEMBL
  ENSMUST00000113329 UniProtKB/Swiss-Prot
  ENSMUST00000123992 UniProtKB/TrEMBL
  ENSMUST00000124058 UniProtKB/TrEMBL
  ENSMUST00000154163 UniProtKB/TrEMBL
  ENSMUST00000175670 UniProtKB/TrEMBL
  ENSMUST00000175886 UniProtKB/TrEMBL
  ENSMUST00000176565 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000176632 UniProtKB/TrEMBL
  ENSMUST00000176850 UniProtKB/TrEMBL
  ENSMUST00000177208 UniProtKB/TrEMBL
  ENSMUST00000177227 UniProtKB/TrEMBL
  ENSMUST00000177229 UniProtKB/TrEMBL
  ENSMUST00000177230 UniProtKB/TrEMBL
  ENSMUST00000177307 UniProtKB/TrEMBL
  ENSMUST00000177437 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000177507 UniProtKB/TrEMBL
Gene3D-CATH 1.10.10.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Fork_head_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FOXP-CC UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TF_fork_head_CS_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WH-like_DNA-bd_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WH_DNA-bd_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:108655 UniProtKB/Swiss-Prot
MGD MGI:1914004 ENTREZGENE
NCBI Gene 108655 ENTREZGENE
Pfam Forkhead UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FOXP-CC UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Foxp1 PhenoGen
PRINTS FORKHEAD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE FORK_HEAD_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FORK_HEAD_3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_1 UniProtKB/Swiss-Prot
SMART SM00339 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF46785 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0R4J1H9 ENTREZGENE, UniProtKB/TrEMBL
  A0A0R4J282 ENTREZGENE, UniProtKB/TrEMBL
  D3Z0J5_MOUSE UniProtKB/TrEMBL
  D3Z2T4_MOUSE UniProtKB/TrEMBL
  D3Z454_MOUSE UniProtKB/TrEMBL
  D3Z6Q3 ENTREZGENE, UniProtKB/TrEMBL
  D3Z6Q4_MOUSE UniProtKB/TrEMBL
  E2S038 ENTREZGENE, UniProtKB/TrEMBL
  FOXP1_MOUSE UniProtKB/Swiss-Prot
  H3BJ24 ENTREZGENE, UniProtKB/TrEMBL
  H3BJ68_MOUSE UniProtKB/TrEMBL
  H3BJM1_MOUSE UniProtKB/TrEMBL