Foxp1 (forkhead box P1) - Rat Genome Database

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Gene: Foxp1 (forkhead box P1) Mus musculus
Analyze
Symbol: Foxp1
Name: forkhead box P1
RGD ID: 1318577
MGI Page MGI
Description: Enables several functions, including DNA-binding transcription repressor activity, RNA polymerase II-specific; identical protein binding activity; and transcription coregulator binding activity. Involved in T follicular helper cell differentiation; nervous system development; and regulation of gene expression. Acts upstream of or within with a positive effect on regulation of androgen receptor signaling pathway. Acts upstream of or within several processes, including positive regulation of cell population proliferation; regulation of gene expression; and striated muscle tissue development. Located in nucleus. Is expressed in several structures, including alimentary system; brain; embryo mesenchyme; genitourinary system; and musculoskeletal system. Human ortholog(s) of this gene implicated in several diseases, including Barrett's esophagus; congenital heart disease; esophagus adenocarcinoma; intellectual disability-severe speech delay-mild dysmorphism syndrome; and peritonitis. Orthologous to human FOXP1 (forkhead box P1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 3110052D19Rik; 4932443N09Rik; AI461938; AW494214; forkhead box protein P1; forkhead-related transcription factor 1; RIKEN cDNA 4932443N09 gene
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39698,902,303 - 99,510,587 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl698,902,299 - 99,499,682 (-)EnsemblGRCm39 Ensembl
GRCm38698,925,342 - 99,522,746 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl698,925,338 - 99,522,721 (-)EnsemblGRCm38mm10GRCm38
MGSCv37698,880,084 - 99,113,012 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36698,895,553 - 99,128,481 (-)NCBIMGSCv36mm8
Celera6100,793,018 - 101,026,348 (-)NCBICelera
Cytogenetic Map6D3NCBI
cM Map645.74NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-catechin  (ISO)
(-)-demecolcine  (ISO)
(-)-epigallocatechin 3-gallate  (ISO)
(S)-nicotine  (EXP)
1,2,4-trichloro-5-(2,5-dichlorophenyl)benzene  (EXP)
1,2-dichloroethane  (EXP)
17beta-estradiol  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (EXP)
2,2',5,5'-tetrachlorobiphenyl  (EXP,ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (ISO)
2,4,4'-trichlorobiphenyl  (EXP)
2,4-dinitrotoluene  (ISO)
2,6-dinitrotoluene  (ISO)
2-butoxyethanol  (EXP)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-sulfonyldiphenol  (EXP,ISO)
4-(N-nitrosomethylamino)-1-(3-pyridyl)butan-1-one  (ISO)
4-hydroxynon-2-enal  (EXP)
4-vinylcyclohexene dioxide  (EXP)
6-propyl-2-thiouracil  (ISO)
acrolein  (ISO)
acrylamide  (ISO)
aflatoxin B1  (EXP,ISO)
aldehydo-D-glucose  (ISO)
all-trans-retinoic acid  (ISO)
alpha-pinene  (ISO)
alpha-Zearalanol  (ISO)
amitrole  (ISO)
amphetamine  (ISO)
aristolochic acid A  (ISO)
Aroclor 1254  (EXP)
arsane  (ISO)
arsenic atom  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
Benzo[k]fluoranthene  (EXP)
bis(2-ethylhexyl) phthalate  (EXP)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
carbon nanotube  (EXP)
CGP 52608  (ISO)
chlorpyrifos  (EXP)
chromium(6+)  (ISO)
cisplatin  (ISO)
cocaine  (EXP)
copper(II) sulfate  (ISO)
crocidolite asbestos  (EXP)
cyclosporin A  (ISO)
D-glucose  (ISO)
dexamethasone  (EXP,ISO)
dibutyl phthalate  (EXP)
dieldrin  (EXP)
disodium selenite  (ISO)
diuron  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
ethanol  (EXP)
fenthion  (EXP)
folic acid  (EXP)
formaldehyde  (ISO)
fulvestrant  (ISO)
gentamycin  (ISO)
glucose  (ISO)
GSK-J4  (ISO)
hydralazine  (ISO)
indometacin  (ISO)
leflunomide  (ISO)
menadione  (ISO)
methapyrilene  (ISO)
methidathion  (EXP)
methimazole  (ISO)
methoxychlor  (EXP,ISO)
methylmercury chloride  (ISO)
morphine  (EXP)
nicotine  (EXP)
oxaliplatin  (ISO)
ozone  (EXP,ISO)
paracetamol  (EXP,ISO)
PCB138  (EXP,ISO)
perfluorooctanoic acid  (ISO)
phenobarbital  (EXP)
phenylmercury acetate  (ISO)
pirinixic acid  (EXP,ISO)
poly(I:C)  (ISO)
potassium chromate  (ISO)
propiconazole  (EXP)
quercetin  (ISO)
rifampicin  (ISO)
rotenone  (ISO)
SB 431542  (ISO)
silver atom  (EXP,ISO)
silver(0)  (EXP,ISO)
sirolimus  (ISO)
sodium arsenate  (EXP)
sodium arsenite  (EXP,ISO)
Stanolone benzoate  (ISO)
succimer  (EXP)
sulfadimethoxine  (ISO)
tetrachloromethane  (EXP)
titanium dioxide  (EXP)
topotecan  (ISO)
triadimefon  (ISO)
triclosan  (ISO)
triptonide  (EXP)
triticonazole  (ISO)
troglitazone  (EXP)
tungsten  (EXP)
valproic acid  (EXP,ISO)
vinclozolin  (ISO)
vincristine  (ISO)
wortmannin  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
cardiac muscle cell differentiation  (IMP)
cellular response to ionomycin  (ISO)
cellular response to tumor necrosis factor  (ISO)
DNA damage response  (ISO)
endothelial cell activation  (ISO,ISS)
forebrain development  (ISO)
heart development  (IMP)
immunoglobulin V(D)J recombination  (IMP)
innate vocalization behavior  (IMP)
lung development  (IGI)
lung epithelium development  (IEA)
lung secretory cell differentiation  (IGI)
macrophage activation  (ISO,ISS)
monocyte activation  (ISO,ISS)
motor neuron axon guidance  (IMP)
negative regulation of androgen receptor signaling pathway  (ISO,ISS)
negative regulation of B cell apoptotic process  (ISO,ISS)
negative regulation of cell growth involved in cardiac muscle cell development  (ISO)
negative regulation of DNA-templated transcription  (IDA,ISO)
negative regulation of gene expression  (ISO)
negative regulation of lung goblet cell differentiation  (IGI)
negative regulation of transcription by RNA polymerase II  (IDA,IGI,ISO)
osteoclast development  (ISO,ISS)
osteoclast differentiation  (ISO,ISS)
positive regulation of B cell receptor signaling pathway  (ISO)
positive regulation of DNA-templated transcription  (IMP)
positive regulation of endothelial cell migration  (ISO,ISS)
positive regulation of epithelial cell proliferation  (IGI)
positive regulation of hydrogen peroxide-mediated programmed cell death  (ISO)
positive regulation of immunoglobulin production  (IMP)
positive regulation of interleukin-21 production  (IDA)
positive regulation of mesenchymal cell proliferation  (IGI)
positive regulation of smooth muscle cell proliferation  (ISO,ISS)
positive regulation of TORC1 signaling  (IGI)
positive regulation of transcription by RNA polymerase II  (IMP)
pre-B cell differentiation  (IMP)
regulation of action potential  (IMP)
regulation of androgen receptor signaling pathway  (IGI)
regulation of cardiac muscle cell proliferation  (IGI,IMP)
regulation of chemokine (C-X-C motif) ligand 2 production  (ISO,ISS)
regulation of defense response to bacterium  (ISO,ISS)
regulation of DNA-templated transcription  (IEA)
regulation of endothelial tube morphogenesis  (ISO)
regulation of gene expression  (ISO)
regulation of inflammatory response  (ISO)
regulation of interleukin-1 beta production  (ISO)
regulation of interleukin-12 production  (ISO)
regulation of lung goblet cell differentiation  (IGI)
regulation of macrophage colony-stimulating factor production  (ISO,ISS)
regulation of monocyte differentiation  (ISO,ISS)
regulation of transcription by RNA polymerase II  (IBA)
regulation of tumor necrosis factor production  (ISO,ISS)
response to lipopolysaccharide  (ISO,ISS)
response to testosterone  (ISO)
skeletal muscle tissue development  (IGI)
smooth muscle tissue development  (IGI)
striatum development  (ISO)
T follicular helper cell differentiation  (IDA)
transcription by RNA polymerase II  (IMP)
ventral spinal cord development  (IEP)

Cellular Component
nucleus  (IBA,IC,IDA,IEA,ISO)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal B cell differentiation  (IAGP)
abnormal B cell physiology  (IAGP)
abnormal branching involved in lung morphogenesis  (IAGP)
abnormal cardiac outflow tract development  (IAGP)
abnormal esophageal smooth muscle morphology  (IAGP)
abnormal esophagus development  (IAGP)
abnormal heart development  (IAGP)
abnormal lung development  (IAGP)
abnormal respiratory system development  (IAGP)
abnormal respiratory system physiology  (IAGP)
abnormal sarcomere morphology  (IAGP)
abnormal T cell activation  (IAGP)
arrested B cell differentiation  (IAGP)
conotruncal ridge hyperplasia  (IAGP)
decreased CD4-positive, alpha-beta T cell number  (IAGP)
decreased CD8-positive, alpha-beta T cell number  (IAGP)
decreased club cell number  (IAGP)
decreased embryo size  (IAGP)
decreased fetal cardiomyocyte proliferation  (IAGP)
decreased heart rate  (IAGP)
decreased lung weight  (IAGP)
decreased mature B cell number  (IAGP)
decreased mesenchymal cell proliferation involved in lung development  (IAGP)
dilated esophagus  (IAGP)
dilated respiratory conducting tube  (IAGP)
disorganized myocardium  (IAGP)
double outlet right ventricle  (IAGP)
embryonic lethality, complete penetrance  (IAGP)
hemorrhage  (IAGP)
hydrops fetalis  (IAGP)
hyperactivity  (IEA)
increased atrioventricular cushion size  (IAGP)
increased fetal cardiomyocyte proliferation  (IAGP)
increased lean body mass  (IEA)
increased susceptibility to injury  (IAGP)
increased T cell apoptosis  (IAGP)
irregular heartbeat  (IAGP)
lethality throughout fetal growth and development, complete penetrance  (IAGP)
lethality throughout fetal growth and development, incomplete penetrance  (IAGP)
neonatal lethality, complete penetrance  (IAGP)
perinatal lethality, complete penetrance  (IAGP)
persistent truncus arteriosus  (IAGP)
prenatal lethality, incomplete penetrance  (IAGP)
preweaning lethality, complete penetrance  (IEA)
respiratory distress  (IAGP)
small lung  (IAGP)
thick interventricular septum  (IAGP)
thick ventricular wall  (IAGP)
thin myocardium  (IAGP)
thin ventricle myocardium compact layer  (IAGP)
thin ventricular wall  (IAGP)
ventricular septal defect  (IAGP)
References

References - curated
# Reference Title Reference Citation
1. Molecular mechanisms of Nano-selenium in mitigating hepatocellular carcinoma induced by N-nitrosodiethylamine (NDEA) in rats. Ahmed HH, etal., Toxicol Mech Methods. 2014 Sep 4:1-10.
2. Abnormal maturation and differentiation of neocortical neurons in epileptogenic cortical malformation: unique distribution of layer-specific marker cells of focal cortical dysplasia and hemimegalencephaly. Arai A, etal., Brain Res. 2012 Aug 27;1470:89-97. doi: 10.1016/j.brainres.2012.06.009. Epub 2012 Jul 1.
3. Genome-wide transcriptomic analysis of intestinal tissue to assess the impact of nutrition and a secondary nematode challenge in lactating rats. Athanasiadou S, etal., PLoS One. 2011;6(6):e20771. doi: 10.1371/journal.pone.0020771. Epub 2011 Jun 16.
4. Supportive evidence for FOXP1, BARX1, and FOXF1 as genetic risk loci for the development of esophageal adenocarcinoma. Becker J, etal., Cancer Med. 2015 Nov;4(11):1700-4. doi: 10.1002/cam4.500. Epub 2015 Aug 15.
5. Genetic abnormalities in FOXP1 are associated with congenital heart defects. Chang SW, etal., Hum Mutat. 2013 Sep;34(9):1226-30. doi: 10.1002/humu.22366. Epub 2013 Jul 11.
6. Selective deficits in the expression of striatal-enriched mRNAs in Huntington's disease. Desplats PA, etal., J Neurochem. 2006 Feb;96(3):743-57. Epub 2006 Jan 9.
7. Genetic and epigenetic analysis of non-small cell lung cancer with NotI-microarrays. Dmitriev AA, etal., Epigenetics. 2012 May;7(5):502-13. doi: 10.4161/epi.19801. Epub 2012 May 1.
8. Transcription repression and blocks in cell cycle progression in hypoplastic left heart syndrome. Gambetta K, etal., Am J Physiol Heart Circ Physiol. 2008 May;294(5):H2268-75. doi: 10.1152/ajpheart.91494.2007. Epub 2008 Mar 14.
9. Transcriptional genomics associates FOX transcription factors with human heart failure. Hannenhalli S, etal., Circulation. 2006 Sep 19;114(12):1269-76. Epub 2006 Sep 4.
10. Expression analysis in a rat psychosis model identifies novel candidate genes validated in a large case-control sample of schizophrenia. Ingason A, etal., Transl Psychiatry. 2015 Oct 13;5:e656. doi: 10.1038/tp.2015.151.
11. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
12. MGDs mouse GO annotations MGD data from the GO Consortium
13. MGD IEA MGD IEA
14. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
15. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
16. Polymorphisms near TBX5 and GDF7 are associated with increased risk for Barrett's esophagus. Palles C, etal., Gastroenterology. 2015 Feb;148(2):367-78. doi: 10.1053/j.gastro.2014.10.041. Epub 2014 Nov 5.
17. Mouse MP Annotation Import Pipeline RGD automated import pipeline
18. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
19. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
20. Down-regulation of the forkhead transcription factor Foxp1 is required for monocyte differentiation and macrophage function. Shi C, etal., Blood. 2008 Dec 1;112(12):4699-711. doi: 10.1182/blood-2008-01-137018. Epub 2008 Sep 17.
21. Reduced expressions of Foxp1 and Rassf1a genes in lung adenocarcinomas induced by N-nitrosobis(2-hydroxypropyl)amine in rats. Shimizu K, etal., Cancer Lett. 2006 May 18;236(2):186-90. Epub 2005 Jul 14.
22. A Nuclear Attack on Traumatic Brain Injury: Sequestration of Cell Death in the Nucleus. Tajiri N, etal., CNS Neurosci Ther. 2016 Apr;22(4):306-15. doi: 10.1111/cns.12501. Epub 2016 Feb 4.
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10512203   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11358962   PMID:12477932   PMID:12520002   PMID:12687690   PMID:12711548   PMID:14516685  
PMID:14610273   PMID:14701752   PMID:14704420   PMID:14980377   PMID:15269172   PMID:15342473   PMID:15618518   PMID:15696161   PMID:15782199   PMID:15840001   PMID:15944189   PMID:15964824  
PMID:16141072   PMID:16141073   PMID:16376864   PMID:16387638   PMID:16602821   PMID:16783635   PMID:16819554   PMID:16919269   PMID:17428829   PMID:17619227   PMID:17660535   PMID:18033766  
PMID:18199763   PMID:18206388   PMID:18270576   PMID:18287559   PMID:18347093   PMID:18469343   PMID:18662545   PMID:18667151   PMID:18799476   PMID:18799693   PMID:18818591   PMID:19007770  
PMID:19030180   PMID:19109910   PMID:19136970   PMID:19208224   PMID:19386638   PMID:19403835   PMID:19463901   PMID:19538736   PMID:19605412   PMID:19709628   PMID:19797899   PMID:19800948  
PMID:19965654   PMID:20056137   PMID:20059953   PMID:20145110   PMID:20175877   PMID:20181597   PMID:20185820   PMID:20211142   PMID:20364144   PMID:20412781   PMID:20457810   PMID:20711475  
PMID:20713518   PMID:20826310   PMID:20943929   PMID:21248112   PMID:21267068   PMID:21338882   PMID:21364975   PMID:21368052   PMID:21532575   PMID:21532733   PMID:21652654   PMID:21677750  
PMID:21873635   PMID:21924763   PMID:21940705   PMID:21943603   PMID:22017987   PMID:22036570   PMID:22036571   PMID:22115757   PMID:22142223   PMID:22266795   PMID:22278924   PMID:22278926  
PMID:22492998   PMID:22516202   PMID:22522401   PMID:22542185   PMID:22629237   PMID:22675208   PMID:22696295   PMID:22794259   PMID:22833130   PMID:22836272   PMID:22922362   PMID:23083737  
PMID:23103965   PMID:23359544   PMID:23499385   PMID:23604909   PMID:23610558   PMID:23622242   PMID:23684982   PMID:23832113   PMID:23946441   PMID:23988635   PMID:24023716   PMID:24056077  
PMID:24082127   PMID:24194600   PMID:24274029   PMID:24347548   PMID:24586749   PMID:24776795   PMID:24859450   PMID:24948600   PMID:24952961   PMID:24982181   PMID:25070536   PMID:25108913  
PMID:25112678   PMID:25238097   PMID:25266127   PMID:25516972   PMID:25527076   PMID:25673830   PMID:25725069   PMID:25737280   PMID:25804738   PMID:25826454   PMID:25843547   PMID:25868900  
PMID:25936505   PMID:25943695   PMID:25948253   PMID:25975898   PMID:26010426   PMID:26021489   PMID:26071365   PMID:26171970   PMID:26186188   PMID:26187199   PMID:26235615   PMID:26245956  
PMID:26329601   PMID:26335645   PMID:26395878   PMID:26490861   PMID:26494785   PMID:26504089   PMID:26542008   PMID:26633881   PMID:26655900   PMID:26718003   PMID:26779814   PMID:26824659  
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PMID:27452460   PMID:27466379   PMID:27477290   PMID:27568519   PMID:27588474   PMID:27664421   PMID:27851915   PMID:27856909   PMID:28190640   PMID:28204507   PMID:28213137   PMID:28240601  
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PMID:40276653  


Genomics

Comparative Map Data
Foxp1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39698,902,303 - 99,510,587 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl698,902,299 - 99,499,682 (-)EnsemblGRCm39 Ensembl
GRCm38698,925,342 - 99,522,746 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl698,925,338 - 99,522,721 (-)EnsemblGRCm38mm10GRCm38
MGSCv37698,880,084 - 99,113,012 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36698,895,553 - 99,128,481 (-)NCBIMGSCv36mm8
Celera6100,793,018 - 101,026,348 (-)NCBICelera
Cytogenetic Map6D3NCBI
cM Map645.74NCBI
FOXP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38370,954,708 - 71,583,978 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl370,954,693 - 71,583,978 (-)EnsemblGRCh38hg38GRCh38
GRCh37371,003,859 - 71,633,129 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36371,087,426 - 71,715,830 (-)NCBINCBI36Build 36hg18NCBI36
Build 34371,087,426 - 71,715,830NCBI
Celera370,931,660 - 71,563,756 (-)NCBICelera
Cytogenetic Map3p13NCBI
HuRef371,002,782 - 71,635,428 (-)NCBIHuRef
CHM1_1370,955,452 - 71,584,748 (-)NCBICHM1_1
T2T-CHM13v2.0370,991,208 - 71,623,253 (-)NCBIT2T-CHM13v2.0
Foxp1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84133,117,346 - 133,808,647 (-)NCBIGRCr8
GRCr8 Ensembl4133,122,055 - 133,500,272 (-)EnsemblGRCr8 Ensembl
mRatBN7.24131,559,599 - 132,155,092 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4131,564,756 - 132,112,258 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4136,982,848 - 137,214,139 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04132,763,929 - 132,994,920 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04131,381,860 - 131,613,170 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04131,362,178 - 131,963,466 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4131,366,744 - 131,694,755 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04195,854,029 - 196,362,864 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44133,773,373 - 134,007,018 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera4120,424,629 - 120,655,076 (-)NCBICelera
RGSC_v3.14134,017,481 - 134,251,846 (-)NCBI
Cytogenetic Map4q34NCBI
Foxp1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542116,595,471 - 17,075,923 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542116,595,445 - 17,075,923 (+)NCBIChiLan1.0ChiLan1.0
FOXP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2270,913,505 - 71,543,398 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1370,918,294 - 71,548,139 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0370,893,933 - 71,523,892 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1372,255,364 - 72,878,625 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl372,258,456 - 72,498,173 (-)Ensemblpanpan1.1panPan2
FOXP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12020,438,631 - 21,020,516 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2020,788,433 - 21,016,397 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2020,414,104 - 20,995,815 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02020,472,109 - 21,055,068 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2020,472,198 - 21,053,329 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12020,158,227 - 20,741,182 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02020,506,753 - 21,089,395 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02020,573,511 - 21,158,112 (+)NCBIUU_Cfam_GSD_1.0
Foxp1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049422,631,781 - 3,146,462 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366032,632,274 - 2,830,324 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366032,631,781 - 3,146,104 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FOXP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1352,348,234 - 52,876,892 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11352,346,844 - 52,974,358 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21357,861,735 - 58,095,301 (-)NCBISscrofa10.2Sscrofa10.2susScr3
FOXP1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12231,907,941 - 32,538,294 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2231,912,460 - 32,154,502 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666041134,241,728 - 134,871,978 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Foxp1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247735,543,536 - 5,883,131 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247735,543,529 - 6,076,522 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Foxp1
27755 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:6295
Count of miRNA genes:966
Interacting mature miRNAs:1414
Transcripts:ENSMUST00000074346, ENSMUST00000075832, ENSMUST00000113321, ENSMUST00000113322, ENSMUST00000113324, ENSMUST00000113326, ENSMUST00000113328, ENSMUST00000113329, ENSMUST00000123992, ENSMUST00000124058, ENSMUST00000131967, ENSMUST00000138754, ENSMUST00000142164, ENSMUST00000154163, ENSMUST00000175670, ENSMUST00000175838, ENSMUST00000175880, ENSMUST00000175886, ENSMUST00000176105, ENSMUST00000176148, ENSMUST00000176565, ENSMUST00000176632, ENSMUST00000176850, ENSMUST00000177208, ENSMUST00000177227, ENSMUST00000177229, ENSMUST00000177230, ENSMUST00000177235, ENSMUST00000177307, ENSMUST00000177410, ENSMUST00000177437, ENSMUST00000177507
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10043864T2dm4sa_mtype 2 diabetes mellitus 4 in SMXA RI mice (mouse)Not determined683690851146954059Mouse
1301521Pas1c_mpulmonary adenoma susceptibility 1c (mouse)Not determined671958006105958152Mouse
1301915Chab3_mcholesterol absorption 3 (mouse)Not determined698908709132916997Mouse
10412119Stv_mstriatal volumne (mouse)Not determined660026991100026967Mouse
1300954Fcsa1_mfemoral cross-sectional area 1 (mouse)Not determined671958006105958152Mouse
10043923Bhr7_mbronchial hyperresponsiveness 7 (mouse)Not determined698219814132219938Mouse
4141940W6q5_mweight 6 weeks QTL 5 (mouse)Not determined96632912146535124Mouse
4142259Tabw2_mtally ho associated body weight 2 (mouse)Not determined46912919136400690Mouse
25314319Histh6_mhistamine hypersensitivity 6 (mouse)648696934125336963Mouse
12792979Fbmd2_mfemoral bone mineral density 2, females only (mouse)675026989115026943Mouse
25314320Histh5_mhistamine hypersensitivity 5 (mouse)648696934148351498Mouse
1300869Stheal5_msoft tissue heal 5 (mouse)Not determined671552042105552160Mouse
1301962Eila2_methanol induced locomotor activity 2 (mouse)Not determined648703490125333748Mouse
1301320Ots1_movarian teratoma susceptibility 1 (mouse)Not determined675424566104480516Mouse
1301262Gasa3_mgastritis type A susceptibility locus 3 (mouse)Not determined688982366122982564Mouse
1301518Bbaa5_mB.burgdorferi-associated arthritis 5 (mouse)Not determined698483798145881170Mouse
11353842Bmiq4_mbody mass index QTL 4 (mouse)692584287146330736Mouse
1302131Bmd8_mbone mineral density 8 (mouse)Not determined699132089133132228Mouse
10412157Fl1n_mfatty liver 1 in NSY (mouse)Not determined645290993128811995Mouse
11251720Ewc4_methanol withdrawal and consumption 4 (mouse)684099474118099474Mouse
1301744Hdlq11_mHDL QTL 11 (mouse)Not determined687480321121480516Mouse
25440480Moaq2_mmodifier of alien QTL 2 (mouse)63050001117476961Mouse
26884414Bzwq12_mbi-zygomatic width QTL 12, 16 week (mouse)63400000139076998Mouse
10043901Pfat5_mpredicted fat percentage 5 (mouse)Not determined675584287109584431Mouse
1301687Mnic2_mmacronutrient intake (mouse)Not determined686783787113521563Mouse
1301813Skl3_mskeletal size (tail length) 3 (mouse)Not determined670402880104403016Mouse
1357683Igf1sl1_mIGF-1 serum levels 1 (mouse)Not determined652138693116132228Mouse
1301876Bits2_mbitterness sensitivity 2 (mouse)Not determined670402880104403016Mouse
1357875Pfat2_mpredicted fat percentage 2 (mouse)Not determined676440930110441074Mouse
1357555Tesq2_mtestis weight QTL 2 (mouse)Not determined696632912146535124Mouse
10412208Cypr4_mcytokine production 4 (mouse)Not determined675693484109693678Mouse
1301244Ichs_mimmediate cutaneous hypersensitivity QTL (mouse)Not determined690772571124772807Mouse
4142416Egq11_mearly growth QTL 11 (mouse)Not determined96632912146535124Mouse
1301923Lith6_mlithogenic gene 6 (mouse)Not determined698694477132694676Mouse
1300704Cia3_mcollagen induced arthritis QTL 3 (mouse)Not determined696324286130324483Mouse
4141578Obrq1_mobesity resistance QTL 1 (mouse)Not determined92584287111981699Mouse
1300650Bw18_mbody weight QTL 18 (mouse)Not determined666690851100691013Mouse
1301034Egrm2_mearly growth rate (mouse)Not determined670402880104403016Mouse
14696731Pairq1_mP. aeruginosa infection resistance QTL 1 (mouse)681476981102176961Mouse
13506930Recrq9_mrecombination rate in male meiosis QTL 9 (mouse)673476983134676963Mouse
4141376Dbm1_mdiabetes modifier 1 (mouse)Not determined678606487121092347Mouse
1301292Cfbw2_mcystic fibrosis body weight 2 (mouse)Not determined694981612128981699Mouse
11040599Lmr4b_mleishmaniasis resistance 4b (mouse)696324286130324483Mouse

Markers in Region
AW494214  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38698,926,406 - 98,926,500UniSTSGRCm38
MGSCv37698,876,400 - 98,876,494UniSTSGRCm37
Celera6100,789,334 - 100,789,428UniSTS
Cytogenetic Map6E1UniSTS
Whitehead/MRC_RH61005.99UniSTS
D6Mit103  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38698,993,988 - 98,994,106UniSTSGRCm38
MGSCv37698,943,982 - 98,944,100UniSTSGRCm37
Celera6100,856,726 - 100,856,830UniSTS
Cytogenetic Map6E1UniSTS
cM Map645.0UniSTS
Whitehead Genetic639.3UniSTS
AI461938  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38698,927,502 - 98,927,608UniSTSGRCm38
MGSCv37698,877,496 - 98,877,602UniSTSGRCm37
Celera6100,790,430 - 100,790,536UniSTS
Cytogenetic Map6E1UniSTS
Whitehead/MRC_RH61006.96UniSTS
Foxp1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
MGSCv37698,879,562 - 98,879,622UniSTSGRCm37
Celera6100,792,496 - 100,792,556UniSTS
cM Map6 UniSTS
WI-17713  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38698,926,796 - 98,926,967UniSTSGRCm38
MGSCv37698,876,790 - 98,876,961UniSTSGRCm37
Celera6100,789,724 - 100,789,895UniSTS
Cytogenetic Map6E1UniSTS
Foxp1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38698,929,568 - 98,929,628UniSTSGRCm38
MGSCv37698,879,562 - 98,879,622UniSTSGRCm37
Celera6100,792,496 - 100,792,556UniSTS
Cytogenetic Map6E1UniSTS
cM Map6 UniSTS
Foxp1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map6E1UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001197321 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001197322 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001347345 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_053202 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505308 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505310 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505311 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505312 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505313 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505314 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505315 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505316 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505319 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505320 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505321 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505322 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505323 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017321301 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017321302 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017321303 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017321304 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017321305 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017321306 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030255061 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030255062 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030255063 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030255064 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030255065 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030255066 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030255067 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030255068 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030255069 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030255070 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030255071 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030255074 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036165728 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036165729 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036165730 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036165731 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036165732 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036165733 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003956146 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004942888 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004942889 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004942890 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AA451299 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB221601 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB221602 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB594192 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC125137 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC132579 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC152987 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC155839 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC163199 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF339103 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF339104 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF339105 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI508521 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK014203 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK031837 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK033368 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK033622 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK037790 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK040800 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK046104 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK051083 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK051887 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK052184 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK077062 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK087357 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK087748 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK139831 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK144920 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK157606 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK160315 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK169176 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK171994 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK190196 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC064764 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC065386 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466523 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EF410101 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000074346   ⟹   ENSMUSP00000073953
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl698,907,051 - 99,139,979 (-)Ensembl
GRCm38.p6 Ensembl698,930,090 - 99,163,018 (-)Ensembl
Ensembl Acc Id: ENSMUST00000075832
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl699,129,019 - 99,243,476 (-)Ensembl
GRCm38.p6 Ensembl699,152,058 - 99,266,515 (-)Ensembl
Ensembl Acc Id: ENSMUST00000113321
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl698,983,646 - 99,005,227 (-)Ensembl
GRCm38.p6 Ensembl699,006,685 - 99,028,266 (-)Ensembl
Ensembl Acc Id: ENSMUST00000113322   ⟹   ENSMUSP00000108948
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl698,902,303 - 99,412,306 (-)Ensembl
GRCm38.p6 Ensembl698,925,342 - 99,435,345 (-)Ensembl
Ensembl Acc Id: ENSMUST00000113324   ⟹   ENSMUSP00000108950
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl698,907,051 - 99,139,979 (-)Ensembl
GRCm38.p6 Ensembl698,930,090 - 99,163,018 (-)Ensembl
Ensembl Acc Id: ENSMUST00000113326   ⟹   ENSMUSP00000108952
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl698,902,299 - 99,243,476 (-)Ensembl
GRCm38.p6 Ensembl698,925,338 - 99,266,515 (-)Ensembl
Ensembl Acc Id: ENSMUST00000113328   ⟹   ENSMUSP00000108954
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl698,907,051 - 99,139,979 (-)Ensembl
GRCm38.p6 Ensembl698,930,090 - 99,163,018 (-)Ensembl
Ensembl Acc Id: ENSMUST00000113329   ⟹   ENSMUSP00000108955
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl698,907,051 - 99,139,979 (-)Ensembl
GRCm38.p6 Ensembl698,930,090 - 99,163,018 (-)Ensembl
Ensembl Acc Id: ENSMUST00000123992   ⟹   ENSMUSP00000117550
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl698,980,354 - 99,021,420 (-)Ensembl
GRCm38.p6 Ensembl699,003,393 - 99,044,459 (-)Ensembl
Ensembl Acc Id: ENSMUST00000124058   ⟹   ENSMUSP00000120244
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl698,922,495 - 99,005,274 (-)Ensembl
GRCm38.p6 Ensembl698,945,534 - 99,028,313 (-)Ensembl
Ensembl Acc Id: ENSMUST00000131967
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl699,138,901 - 99,243,493 (-)Ensembl
GRCm38.p6 Ensembl699,161,940 - 99,266,532 (-)Ensembl
Ensembl Acc Id: ENSMUST00000138754
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl699,138,901 - 99,243,493 (-)Ensembl
GRCm38.p6 Ensembl699,161,940 - 99,266,532 (-)Ensembl
Ensembl Acc Id: ENSMUST00000142164
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl698,929,162 - 98,980,641 (-)Ensembl
GRCm38.p6 Ensembl698,952,201 - 99,003,680 (-)Ensembl
Ensembl Acc Id: ENSMUST00000154163   ⟹   ENSMUSP00000121404
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl698,980,161 - 99,005,903 (-)Ensembl
GRCm38.p6 Ensembl699,003,200 - 99,028,942 (-)Ensembl
Ensembl Acc Id: ENSMUST00000175670   ⟹   ENSMUSP00000135237
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl698,993,511 - 99,004,952 (-)Ensembl
GRCm38.p6 Ensembl699,016,550 - 99,027,991 (-)Ensembl
Ensembl Acc Id: ENSMUST00000175838
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl699,412,197 - 99,499,682 (-)Ensembl
GRCm38.p6 Ensembl699,435,236 - 99,522,721 (-)Ensembl
Ensembl Acc Id: ENSMUST00000175880
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl698,907,132 - 98,912,506 (-)Ensembl
GRCm38.p6 Ensembl698,930,171 - 98,935,545 (-)Ensembl
Ensembl Acc Id: ENSMUST00000175886   ⟹   ENSMUSP00000135517
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl698,986,894 - 99,073,166 (-)Ensembl
GRCm38.p6 Ensembl699,009,933 - 99,096,205 (-)Ensembl
Ensembl Acc Id: ENSMUST00000176105
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl699,285,338 - 99,413,357 (-)Ensembl
GRCm38.p6 Ensembl699,308,377 - 99,436,396 (-)Ensembl
Ensembl Acc Id: ENSMUST00000176565   ⟹   ENSMUSP00000135181
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl698,906,150 - 99,497,958 (-)Ensembl
GRCm38.p6 Ensembl698,929,189 - 99,520,997 (-)Ensembl
Ensembl Acc Id: ENSMUST00000176632   ⟹   ENSMUSP00000135635
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl698,907,051 - 99,412,306 (-)Ensembl
GRCm38.p6 Ensembl698,930,090 - 99,435,345 (-)Ensembl
Ensembl Acc Id: ENSMUST00000176850   ⟹   ENSMUSP00000135041
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl698,907,051 - 99,412,306 (-)Ensembl
GRCm38.p6 Ensembl698,930,090 - 99,435,345 (-)Ensembl
Ensembl Acc Id: ENSMUST00000177208   ⟹   ENSMUSP00000135187
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl699,052,923 - 99,225,297 (-)Ensembl
GRCm38.p6 Ensembl699,075,962 - 99,248,336 (-)Ensembl
Ensembl Acc Id: ENSMUST00000177227   ⟹   ENSMUSP00000135229
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl699,139,890 - 99,498,123 (-)Ensembl
GRCm38.p6 Ensembl699,162,929 - 99,521,162 (-)Ensembl
Ensembl Acc Id: ENSMUST00000177229   ⟹   ENSMUSP00000134817
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl698,907,051 - 99,005,220 (-)Ensembl
GRCm38.p6 Ensembl698,930,090 - 99,028,259 (-)Ensembl
Ensembl Acc Id: ENSMUST00000177230   ⟹   ENSMUSP00000135098
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl698,907,051 - 99,139,979 (-)Ensembl
GRCm38.p6 Ensembl698,930,090 - 99,163,018 (-)Ensembl
Ensembl Acc Id: ENSMUST00000177235
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl699,237,318 - 99,499,608 (-)Ensembl
GRCm38.p6 Ensembl699,260,357 - 99,522,647 (-)Ensembl
Ensembl Acc Id: ENSMUST00000177307   ⟹   ENSMUSP00000135764
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl698,907,051 - 99,139,979 (-)Ensembl
GRCm38.p6 Ensembl698,930,090 - 99,163,018 (-)Ensembl
Ensembl Acc Id: ENSMUST00000177410
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl698,902,376 - 98,906,746 (-)Ensembl
GRCm38.p6 Ensembl698,925,415 - 98,929,785 (-)Ensembl
Ensembl Acc Id: ENSMUST00000177437   ⟹   ENSMUSP00000135809
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl698,906,427 - 99,005,219 (-)Ensembl
GRCm38.p6 Ensembl698,929,466 - 99,028,258 (-)Ensembl
Ensembl Acc Id: ENSMUST00000177507   ⟹   ENSMUSP00000134869
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl698,986,905 - 99,021,403 (-)Ensembl
GRCm38.p6 Ensembl699,009,944 - 99,044,442 (-)Ensembl
RefSeq Acc Id: NM_001197321   ⟹   NP_001184250
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,243,476 (-)NCBI
GRCm38698,925,342 - 99,266,515 (-)NCBI
Celera6100,788,270 - 101,299,156 (-)ENTREZGENE
cM Map6 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001197322   ⟹   NP_001184251
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,005,259 (-)NCBI
GRCm38698,925,342 - 99,028,298 (-)NCBI
Celera6100,788,270 - 101,299,156 (-)ENTREZGENE
cM Map6 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001347345   ⟹   NP_001334274
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,497,954 (-)NCBI
GRCm38698,925,342 - 99,520,993 (-)NCBI
Sequence:
RefSeq Acc Id: NM_053202   ⟹   NP_444432
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,412,306 (-)NCBI
GRCm38698,925,342 - 99,435,345 (-)NCBI
MGSCv37698,880,084 - 99,113,012 (-)RGD
Celera6100,788,270 - 101,299,156 (-)ENTREZGENE
cM Map6 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006505308   ⟹   XP_006505371
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,499,705 (-)NCBI
GRCm38698,925,342 - 99,522,741 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006505310   ⟹   XP_006505373
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,316,386 (-)NCBI
GRCm38698,925,342 - 99,339,441 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006505311   ⟹   XP_006505374
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,243,560 (-)NCBI
GRCm38698,925,342 - 99,266,646 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006505312   ⟹   XP_006505375
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,243,560 (-)NCBI
GRCm38698,925,342 - 99,266,599 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006505313   ⟹   XP_006505376
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,150,339 (-)NCBI
GRCm38698,925,342 - 99,173,378 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006505314   ⟹   XP_006505377
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,499,706 (-)NCBI
GRCm38698,925,342 - 99,522,742 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006505315   ⟹   XP_006505378
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,499,706 (-)NCBI
GRCm38698,925,342 - 99,522,742 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006505316   ⟹   XP_006505379
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,499,707 (-)NCBI
GRCm38698,925,342 - 99,522,743 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006505319   ⟹   XP_006505382
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,005,898 (-)NCBI
GRCm38698,925,342 - 99,028,937 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006505320   ⟹   XP_006505383
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,030,079 (-)NCBI
GRCm38698,925,342 - 99,053,118 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006505321   ⟹   XP_006505384
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,004,947 (-)NCBI
GRCm38698,925,342 - 99,027,986 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006505322   ⟹   XP_006505385
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,005,875 (-)NCBI
GRCm38698,925,342 - 99,028,914 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006505323   ⟹   XP_006505386
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,030,079 (-)NCBI
GRCm38698,925,342 - 99,053,118 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017321301   ⟹   XP_017176790
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,499,705 (-)NCBI
GRCm38698,925,342 - 99,522,741 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017321302   ⟹   XP_017176791
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,446,391 (-)NCBI
GRCm38698,925,342 - 99,469,430 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017321303   ⟹   XP_017176792
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,499,705 (-)NCBI
GRCm38698,925,342 - 99,522,741 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017321304   ⟹   XP_017176793
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,422,623 (-)NCBI
GRCm38698,925,342 - 99,445,668 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017321305   ⟹   XP_017176794
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,074,080 (-)NCBI
GRCm38698,925,342 - 99,096,983 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017321306   ⟹   XP_017176795
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,005,279 (-)NCBI
GRCm38698,925,342 - 99,028,550 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030255061   ⟹   XP_030110921
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,179,294 (-)NCBI
GRCm38698,925,342 - 99,202,318 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030255062   ⟹   XP_030110922
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,181,415 (-)NCBI
GRCm38698,925,342 - 99,204,660 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030255063   ⟹   XP_030110923
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,181,942 (-)NCBI
GRCm38698,925,342 - 99,204,956 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030255064   ⟹   XP_030110924
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,499,706 (-)NCBI
GRCm38698,925,342 - 99,522,742 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030255065   ⟹   XP_030110925
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,499,706 (-)NCBI
GRCm38698,925,342 - 99,522,742 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030255066   ⟹   XP_030110926
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,499,706 (-)NCBI
GRCm38698,925,342 - 99,522,742 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030255067   ⟹   XP_030110927
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,179,291 (-)NCBI
GRCm38698,925,342 - 99,202,325 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030255068   ⟹   XP_030110928
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,074,726 (-)NCBI
GRCm38698,925,342 - 99,097,770 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030255069   ⟹   XP_030110929
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,074,080 (-)NCBI
GRCm38698,925,342 - 99,096,672 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030255070   ⟹   XP_030110930
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,074,080 (-)NCBI
GRCm38698,925,342 - 99,096,672 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030255071   ⟹   XP_030110931
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,005,269 (-)NCBI
GRCm38698,925,342 - 99,028,304 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030255074   ⟹   XP_030110934
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,139,990 (-)NCBI
GRCm38698,925,342 - 99,163,029 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036165728   ⟹   XP_036021621
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,510,587 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036165729   ⟹   XP_036021622
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,499,705 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036165730   ⟹   XP_036021623
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,475,365 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036165731   ⟹   XP_036021624
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,499,705 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036165732   ⟹   XP_036021625
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,510,587 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036165733   ⟹   XP_036021626
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,005,898 (-)NCBI
Sequence:
RefSeq Acc Id: XR_003956146
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,005,898 (-)NCBI
GRCm38698,929,191 - 99,028,937 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004942888
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,499,710 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004942889
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,906,981 - 99,005,269 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004942890
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39698,902,303 - 99,005,269 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001184250 (Get FASTA)   NCBI Sequence Viewer  
  NP_001184251 (Get FASTA)   NCBI Sequence Viewer  
  NP_001334274 (Get FASTA)   NCBI Sequence Viewer  
  NP_444432 (Get FASTA)   NCBI Sequence Viewer  
  XP_006505371 (Get FASTA)   NCBI Sequence Viewer  
  XP_006505373 (Get FASTA)   NCBI Sequence Viewer  
  XP_006505374 (Get FASTA)   NCBI Sequence Viewer  
  XP_006505375 (Get FASTA)   NCBI Sequence Viewer  
  XP_006505376 (Get FASTA)   NCBI Sequence Viewer  
  XP_006505377 (Get FASTA)   NCBI Sequence Viewer  
  XP_006505378 (Get FASTA)   NCBI Sequence Viewer  
  XP_006505379 (Get FASTA)   NCBI Sequence Viewer  
  XP_006505382 (Get FASTA)   NCBI Sequence Viewer  
  XP_006505383 (Get FASTA)   NCBI Sequence Viewer  
  XP_006505384 (Get FASTA)   NCBI Sequence Viewer  
  XP_006505385 (Get FASTA)   NCBI Sequence Viewer  
  XP_006505386 (Get FASTA)   NCBI Sequence Viewer  
  XP_017176790 (Get FASTA)   NCBI Sequence Viewer  
  XP_017176791 (Get FASTA)   NCBI Sequence Viewer  
  XP_017176792 (Get FASTA)   NCBI Sequence Viewer  
  XP_017176793 (Get FASTA)   NCBI Sequence Viewer  
  XP_017176794 (Get FASTA)   NCBI Sequence Viewer  
  XP_017176795 (Get FASTA)   NCBI Sequence Viewer  
  XP_030110921 (Get FASTA)   NCBI Sequence Viewer  
  XP_030110922 (Get FASTA)   NCBI Sequence Viewer  
  XP_030110923 (Get FASTA)   NCBI Sequence Viewer  
  XP_030110924 (Get FASTA)   NCBI Sequence Viewer  
  XP_030110925 (Get FASTA)   NCBI Sequence Viewer  
  XP_030110926 (Get FASTA)   NCBI Sequence Viewer  
  XP_030110927 (Get FASTA)   NCBI Sequence Viewer  
  XP_030110928 (Get FASTA)   NCBI Sequence Viewer  
  XP_030110929 (Get FASTA)   NCBI Sequence Viewer  
  XP_030110930 (Get FASTA)   NCBI Sequence Viewer  
  XP_030110931 (Get FASTA)   NCBI Sequence Viewer  
  XP_030110934 (Get FASTA)   NCBI Sequence Viewer  
  XP_036021621 (Get FASTA)   NCBI Sequence Viewer  
  XP_036021622 (Get FASTA)   NCBI Sequence Viewer  
  XP_036021623 (Get FASTA)   NCBI Sequence Viewer  
  XP_036021624 (Get FASTA)   NCBI Sequence Viewer  
  XP_036021625 (Get FASTA)   NCBI Sequence Viewer  
  XP_036021626 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH64764 (Get FASTA)   NCBI Sequence Viewer  
  AAH65386 (Get FASTA)   NCBI Sequence Viewer  
  AAK69648 (Get FASTA)   NCBI Sequence Viewer  
  AAK69649 (Get FASTA)   NCBI Sequence Viewer  
  AAK69650 (Get FASTA)   NCBI Sequence Viewer  
  BAC27573 (Get FASTA)   NCBI Sequence Viewer  
  BAC28249 (Get FASTA)   NCBI Sequence Viewer  
  BAC36586 (Get FASTA)   NCBI Sequence Viewer  
  BAE26136 (Get FASTA)   NCBI Sequence Viewer  
  BAJ22962 (Get FASTA)   NCBI Sequence Viewer  
  EDK99363 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000073953.6
  ENSMUSP00000108948
  ENSMUSP00000108948.3
  ENSMUSP00000108950
  ENSMUSP00000108952
  ENSMUSP00000108954
  ENSMUSP00000108955.4
  ENSMUSP00000134817
  ENSMUSP00000135041
  ENSMUSP00000135181
  ENSMUSP00000135764
  ENSMUSP00000135809
GenBank Protein P58462 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_444432   ⟸   NM_053202
- Peptide Label: isoform 1
- UniProtKB: Q8CCD9 (UniProtKB/Swiss-Prot),   Q8C5V2 (UniProtKB/Swiss-Prot),   Q6P221 (UniProtKB/Swiss-Prot),   P58462 (UniProtKB/Swiss-Prot),   D3Z6Q4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001184250   ⟸   NM_001197321
- Peptide Label: isoform 2
- UniProtKB: A0A0R4J1H9 (UniProtKB/TrEMBL),   H3BJM1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001184251   ⟸   NM_001197322
- Peptide Label: isoform 3
- UniProtKB: A0A0R4J282 (UniProtKB/TrEMBL),   H3BL33 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006505371   ⟸   XM_006505308
- Peptide Label: isoform X1
- UniProtKB: D3Z6Q4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006505379   ⟸   XM_006505316
- Peptide Label: isoform X4
- UniProtKB: D3Z6Q4 (UniProtKB/TrEMBL),   E2S038 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006505377   ⟸   XM_006505314
- Peptide Label: isoform X2
- UniProtKB: D3Z6Q3 (UniProtKB/TrEMBL),   D3Z6Q4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006505378   ⟸   XM_006505315
- Peptide Label: isoform X3
- UniProtKB: D3Z6Q4 (UniProtKB/TrEMBL),   H3BLF2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006505373   ⟸   XM_006505310
- Peptide Label: isoform X1
- UniProtKB: D3Z6Q4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006505374   ⟸   XM_006505311
- Peptide Label: isoform X1
- UniProtKB: D3Z6Q4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006505375   ⟸   XM_006505312
- Peptide Label: isoform X1
- UniProtKB: D3Z6Q4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006505376   ⟸   XM_006505313
- Peptide Label: isoform X1
- UniProtKB: D3Z6Q4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006505386   ⟸   XM_006505323
- Peptide Label: isoform X6
- UniProtKB: A0A0R4J282 (UniProtKB/TrEMBL),   H3BL33 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006505383   ⟸   XM_006505320
- Peptide Label: isoform X5
- UniProtKB: H3BJ24 (UniProtKB/TrEMBL),   H3BJM1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006505382   ⟸   XM_006505319
- Peptide Label: isoform X5
- UniProtKB: H3BJ24 (UniProtKB/TrEMBL),   H3BJM1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006505385   ⟸   XM_006505322
- Peptide Label: isoform X6
- UniProtKB: A0A0R4J282 (UniProtKB/TrEMBL),   H3BL33 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006505384   ⟸   XM_006505321
- Peptide Label: isoform X5
- UniProtKB: H3BJ24 (UniProtKB/TrEMBL),   H3BJM1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017176790   ⟸   XM_017321301
- Peptide Label: isoform X1
- UniProtKB: D3Z6Q4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017176792   ⟸   XM_017321303
- Peptide Label: isoform X1
- UniProtKB: D3Z6Q4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017176791   ⟸   XM_017321302
- Peptide Label: isoform X1
- UniProtKB: D3Z6Q4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017176793   ⟸   XM_017321304
- Peptide Label: isoform X1
- UniProtKB: D3Z6Q4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017176794   ⟸   XM_017321305
- Peptide Label: isoform X5
- UniProtKB: H3BJ24 (UniProtKB/TrEMBL),   H3BJM1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017176795   ⟸   XM_017321306
- Peptide Label: isoform X5
- UniProtKB: H3BJ24 (UniProtKB/TrEMBL),   H3BJM1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030110924   ⟸   XM_030255064
- Peptide Label: isoform X2
- UniProtKB: D3Z6Q3 (UniProtKB/TrEMBL),   D3Z6Q4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030110925   ⟸   XM_030255065
- Peptide Label: isoform X3
- UniProtKB: D3Z6Q4 (UniProtKB/TrEMBL),   H3BLF2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030110926   ⟸   XM_030255066
- Peptide Label: isoform X3
- UniProtKB: D3Z6Q4 (UniProtKB/TrEMBL),   H3BLF2 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001334274   ⟸   NM_001347345
- Peptide Label: isoform 4
- UniProtKB: D3Z6Q4 (UniProtKB/TrEMBL),   E2S038 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030110923   ⟸   XM_030255063
- Peptide Label: isoform X1
- UniProtKB: D3Z6Q4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030110922   ⟸   XM_030255062
- Peptide Label: isoform X1
- UniProtKB: D3Z6Q4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030110927   ⟸   XM_030255067
- Peptide Label: isoform X3
- UniProtKB: D3Z6Q4 (UniProtKB/TrEMBL),   H3BLF2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030110921   ⟸   XM_030255061
- Peptide Label: isoform X1
- UniProtKB: D3Z6Q4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030110934   ⟸   XM_030255074
- Peptide Label: isoform X8
- UniProtKB: D3Z6Q4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030110928   ⟸   XM_030255068
- Peptide Label: isoform X5
- UniProtKB: H3BJ24 (UniProtKB/TrEMBL),   H3BJM1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030110929   ⟸   XM_030255069
- Peptide Label: isoform X6
- UniProtKB: A0A0R4J282 (UniProtKB/TrEMBL),   H3BL33 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030110930   ⟸   XM_030255070
- Peptide Label: isoform X7
- UniProtKB: H3BJM1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030110931   ⟸   XM_030255071
- Peptide Label: isoform X7
- UniProtKB: H3BJM1 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSMUSP00000120244   ⟸   ENSMUST00000124058
Ensembl Acc Id: ENSMUSP00000134817   ⟸   ENSMUST00000177229
Ensembl Acc Id: ENSMUSP00000135229   ⟸   ENSMUST00000177227
Ensembl Acc Id: ENSMUSP00000135098   ⟸   ENSMUST00000177230
Ensembl Acc Id: ENSMUSP00000135187   ⟸   ENSMUST00000177208
Ensembl Acc Id: ENSMUSP00000135764   ⟸   ENSMUST00000177307
Ensembl Acc Id: ENSMUSP00000135809   ⟸   ENSMUST00000177437
Ensembl Acc Id: ENSMUSP00000134869   ⟸   ENSMUST00000177507
Ensembl Acc Id: ENSMUSP00000108948   ⟸   ENSMUST00000113322
Ensembl Acc Id: ENSMUSP00000108950   ⟸   ENSMUST00000113324
Ensembl Acc Id: ENSMUSP00000108955   ⟸   ENSMUST00000113329
Ensembl Acc Id: ENSMUSP00000108952   ⟸   ENSMUST00000113326
Ensembl Acc Id: ENSMUSP00000108954   ⟸   ENSMUST00000113328
Ensembl Acc Id: ENSMUSP00000073953   ⟸   ENSMUST00000074346
Ensembl Acc Id: ENSMUSP00000121404   ⟸   ENSMUST00000154163
Ensembl Acc Id: ENSMUSP00000135041   ⟸   ENSMUST00000176850
Ensembl Acc Id: ENSMUSP00000117550   ⟸   ENSMUST00000123992
Ensembl Acc Id: ENSMUSP00000135181   ⟸   ENSMUST00000176565
Ensembl Acc Id: ENSMUSP00000135635   ⟸   ENSMUST00000176632
Ensembl Acc Id: ENSMUSP00000135517   ⟸   ENSMUST00000175886
Ensembl Acc Id: ENSMUSP00000135237   ⟸   ENSMUST00000175670
RefSeq Acc Id: XP_036021625   ⟸   XM_036165732
- Peptide Label: isoform X3
- UniProtKB: D3Z6Q4 (UniProtKB/TrEMBL),   H3BLF2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036021621   ⟸   XM_036165728
- Peptide Label: isoform X1
- UniProtKB: D3Z6Q4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036021622   ⟸   XM_036165729
- Peptide Label: isoform X1
- UniProtKB: D3Z6Q4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036021624   ⟸   XM_036165731
- Peptide Label: isoform X1
- UniProtKB: D3Z6Q4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036021623   ⟸   XM_036165730
- Peptide Label: isoform X1
- UniProtKB: D3Z6Q4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036021626   ⟸   XM_036165733
- Peptide Label: isoform X7
- UniProtKB: H3BJM1 (UniProtKB/TrEMBL)
Protein Domains
Fork-head   FOXP coiled-coil

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P58462-F1-model_v2 AlphaFold P58462 1-705 view protein structure

Promoters
RGD ID:6838904
Promoter ID:MM_KWN:47032
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Lung,   MEF_B6
Transcripts:UC009DBG.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36698,877,496 - 98,880,557 (-)MPROMDB
RGD ID:6839309
Promoter ID:MM_KWN:47035
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Lung,   MEF_B6,   Spleen
Transcripts:ENSMUST00000068823
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36698,953,186 - 98,954,467 (-)MPROMDB
RGD ID:6839329
Promoter ID:MM_KWN:47036
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   ES_Cell,   Lung,   MEF_B6,   Spleen
Transcripts:ENSMUST00000113321,   OTTMUST00000054490,   OTTMUST00000054491,   UC009DBH.1,   UC009DBO.1,   UC009DBP.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36698,978,246 - 98,978,967 (-)MPROMDB
RGD ID:6890532
Promoter ID:EPDNEW_M8717
Type:initiation region
Name:Foxp1_1
Description:Mus musculus forkhead box P1 , transcript variant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M8718  EPDNEW_M8719  EPDNEW_M8720  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38699,028,258 - 99,028,318EPDNEW
RGD ID:6890534
Promoter ID:EPDNEW_M8718
Type:initiation region
Name:Foxp1_3
Description:Mus musculus forkhead box P1 , transcript variant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M8717  EPDNEW_M8719  EPDNEW_M8720  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38699,266,511 - 99,266,571EPDNEW
RGD ID:6890536
Promoter ID:EPDNEW_M8719
Type:single initiation site
Name:Foxp1_4
Description:Mus musculus forkhead box P1 , transcript variant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M8717  EPDNEW_M8718  EPDNEW_M8720  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38699,518,638 - 99,518,698EPDNEW
RGD ID:6890538
Promoter ID:EPDNEW_M8720
Type:initiation region
Name:Foxp1_2
Description:Mus musculus forkhead box P1 , transcript variant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M8717  EPDNEW_M8718  EPDNEW_M8719  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38699,521,002 - 99,521,062EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1914004 AgrOrtholog
Ensembl Genes ENSMUSG00000030067 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000074346.12 UniProtKB/Swiss-Prot
  ENSMUST00000113322 ENTREZGENE
  ENSMUST00000113322.9 UniProtKB/Swiss-Prot
  ENSMUST00000113324 ENTREZGENE
  ENSMUST00000113326 ENTREZGENE
  ENSMUST00000113328 ENTREZGENE
  ENSMUST00000113329.10 UniProtKB/Swiss-Prot
  ENSMUST00000176565 ENTREZGENE
  ENSMUST00000176850 ENTREZGENE
  ENSMUST00000177229 ENTREZGENE
  ENSMUST00000177307 ENTREZGENE
  ENSMUST00000177437 ENTREZGENE
Gene3D-CATH 1.10.10.10 UniProtKB/Swiss-Prot
  1.20.5.340 UniProtKB/Swiss-Prot
InterPro FH_FOXP1_P2 UniProtKB/Swiss-Prot
  Fork_head_dom UniProtKB/Swiss-Prot
  FOXP UniProtKB/Swiss-Prot
  FOXP-CC UniProtKB/Swiss-Prot
  TF_fork_head_CS_2 UniProtKB/Swiss-Prot
  WH-like_DNA-bd_sf UniProtKB/Swiss-Prot
  WH_DNA-bd_sf UniProtKB/Swiss-Prot
KEGG Report mmu:108655 UniProtKB/Swiss-Prot
MGD MGI:1914004 ENTREZGENE
NCBI Gene Foxp1 ENTREZGENE
PANTHER FORKHEAD BOX P, ISOFORM C UniProtKB/Swiss-Prot
  FORKHEAD BOX PROTEIN P1 UniProtKB/Swiss-Prot
Pfam Forkhead UniProtKB/Swiss-Prot
  FOXP-CC UniProtKB/Swiss-Prot
PhenoGen Foxp1 PhenoGen
PRINTS FORKHEAD UniProtKB/Swiss-Prot
PROSITE FORK_HEAD_2 UniProtKB/Swiss-Prot
  FORK_HEAD_3 UniProtKB/Swiss-Prot
  ZINC_FINGER_C2H2_1 UniProtKB/Swiss-Prot
SMART SM00339 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF46785 UniProtKB/Swiss-Prot
UniProt A0A0R4J1H9 ENTREZGENE, UniProtKB/TrEMBL
  A0A0R4J282 ENTREZGENE, UniProtKB/TrEMBL
  D3Z0J5_MOUSE UniProtKB/TrEMBL
  D3Z2T4_MOUSE UniProtKB/TrEMBL
  D3Z454_MOUSE UniProtKB/TrEMBL
  D3Z6Q3 ENTREZGENE, UniProtKB/TrEMBL
  D3Z6Q4 ENTREZGENE, UniProtKB/TrEMBL
  E2S038 ENTREZGENE, UniProtKB/TrEMBL
  FOXP1_MOUSE UniProtKB/Swiss-Prot
  H3BJ24 ENTREZGENE, UniProtKB/TrEMBL
  H3BJ68_MOUSE UniProtKB/TrEMBL
  H3BJM1 ENTREZGENE, UniProtKB/TrEMBL
  H3BJR8_MOUSE UniProtKB/TrEMBL
  H3BJZ5_MOUSE UniProtKB/TrEMBL
  H3BK30_MOUSE UniProtKB/TrEMBL
  H3BK38_MOUSE UniProtKB/TrEMBL
  H3BKT4_MOUSE UniProtKB/TrEMBL
  H3BL33 ENTREZGENE, UniProtKB/TrEMBL
  H3BLF2 ENTREZGENE, UniProtKB/TrEMBL
  P58462 ENTREZGENE
  Q3UMG2_MOUSE UniProtKB/TrEMBL
  Q6P0X7_MOUSE UniProtKB/TrEMBL
  Q6P221 ENTREZGENE
  Q8C5V2 ENTREZGENE
  Q8CCD9 ENTREZGENE
  Q8CCZ5_MOUSE UniProtKB/TrEMBL
UniProt Secondary Q6P221 UniProtKB/Swiss-Prot
  Q8C5V2 UniProtKB/Swiss-Prot
  Q8CCD9 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2024-08-21 Foxp1  forkhead box P1  4932443N09Rik  RIKEN cDNA 4932443N09 gene  Symbol and/or name change 5135510 APPROVED
2024-08-21 4932443N09Rik  RIKEN cDNA 4932443N09 gene  Foxp1  forkhead box P1  Symbol and/or name change 5135510 APPROVED