Fbxw11 (F-box and WD-40 domain protein 11) - Rat Genome Database

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Gene: Fbxw11 (F-box and WD-40 domain protein 11) Mus musculus
Analyze
Symbol: Fbxw11
Name: F-box and WD-40 domain protein 11
RGD ID: 1553129
MGI Page MGI
Description: Enables ubiquitin-protein transferase activity. Contributes to ubiquitin protein ligase activity. Involved in several processes, including SCF-dependent proteasomal ubiquitin-dependent protein catabolic process; negative regulation of non-canonical NF-kappaB signal transduction; and protein dephosphorylation. Located in cytosol and nucleus. Part of SCF ubiquitin ligase complex. Is expressed in several structures, including genitourinary system and yolk sac. Orthologous to human FBXW11 (F-box and WD repeat domain containing 11).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 2310065A07Rik; AA536858; BTRC; BTRC2; BTRCP2; F-box and WD repeats protein beta-TrCP2; F-box and WD-40 domain protein 1B; F-box/WD repeat-containing protein 11; F-box/WD repeat-containing protein 1B; Fbxw1b; H; homologous to Slimb protein; HOS; mKIAA0696
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391132,592,595 - 32,696,816 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1132,592,724 - 32,696,816 (+)EnsemblGRCm39 Ensembl
GRCm381132,642,555 - 32,746,816 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1132,642,724 - 32,746,816 (+)EnsemblGRCm38mm10GRCm38
MGSCv371132,542,875 - 32,646,816 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361132,542,875 - 32,646,816 (+)NCBIMGSCv36mm8
Celera1135,097,954 - 35,164,258 (+)NCBICelera
Cytogenetic Map11A4NCBI
cM Map1119.02NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Systematic analysis and nomenclature of mammalian F-box proteins. Jin J, etal., Genes Dev 2004 Nov 1;18(21):2573-80.
2. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
6. PID Annotation Import Pipeline Pipeline to import Pathway Interaction Database annotations from NCI into RGD
7. Mouse MP Annotation Import Pipeline RGD automated import pipeline
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11896578   PMID:12465718   PMID:12477932   PMID:12520002   PMID:12904583   PMID:14610273   PMID:15782199  
PMID:16141072   PMID:16141073   PMID:17636028   PMID:17967808   PMID:18287559   PMID:18782782   PMID:18799693   PMID:18929646   PMID:19515997   PMID:21267068   PMID:21677750   PMID:21873635  
PMID:22307056   PMID:24469832   PMID:26240281   PMID:26496610   PMID:28982686   PMID:29091030   PMID:29103939   PMID:30031111   PMID:30391586   PMID:31040226   PMID:32325033   PMID:32968282  
PMID:33640602   PMID:38182068  


Genomics

Comparative Map Data
Fbxw11
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391132,592,595 - 32,696,816 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1132,592,724 - 32,696,816 (+)EnsemblGRCm39 Ensembl
GRCm381132,642,555 - 32,746,816 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1132,642,724 - 32,746,816 (+)EnsemblGRCm38mm10GRCm38
MGSCv371132,542,875 - 32,646,816 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361132,542,875 - 32,646,816 (+)NCBIMGSCv36mm8
Celera1135,097,954 - 35,164,258 (+)NCBICelera
Cytogenetic Map11A4NCBI
cM Map1119.02NCBI
FBXW11
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385171,861,549 - 172,006,638 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5171,861,549 - 172,006,873 (-)EnsemblGRCh38hg38GRCh38
GRCh375171,288,553 - 171,433,642 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 365171,221,161 - 171,366,482 (-)NCBINCBI36Build 36hg18NCBI36
Celera5167,321,013 - 167,466,463 (-)NCBICelera
Cytogenetic Map5q35.1NCBI
HuRef5166,384,918 - 166,530,978 (-)NCBIHuRef
CHM1_15170,721,014 - 170,866,350 (-)NCBICHM1_1
T2T-CHM13v2.05172,401,847 - 172,546,952 (-)NCBIT2T-CHM13v2.0
Fbxw11
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81017,737,181 - 17,834,834 (+)NCBIGRCr8
mRatBN7.21017,232,735 - 17,330,574 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1017,227,181 - 17,330,571 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1021,981,943 - 22,079,366 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01021,470,550 - 21,567,952 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01016,958,675 - 17,056,257 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01017,542,374 - 17,640,718 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1017,542,374 - 17,640,718 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01017,430,246 - 17,528,590 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41017,502,480 - 17,600,199 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11017,503,612 - 17,599,012 (+)NCBI
Celera1016,877,301 - 16,974,446 (+)NCBICelera
Cytogenetic Map10q12NCBI
Fbxw11
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540824,687,493 - 24,834,345 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540824,703,477 - 24,834,522 (-)NCBIChiLan1.0ChiLan1.0
FBXW11
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v24166,996,014 - 167,146,079 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan15165,135,553 - 165,285,624 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v05167,207,643 - 167,354,730 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15174,124,499 - 174,271,971 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5174,124,499 - 174,271,977 (-)Ensemblpanpan1.1panPan2
FBXW11
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1440,238,695 - 40,363,445 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl440,238,737 - 40,361,125 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha440,187,588 - 40,312,355 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0440,613,819 - 40,738,727 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl440,613,835 - 40,738,782 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1440,429,468 - 40,554,217 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0440,619,623 - 40,744,342 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0441,129,822 - 41,254,632 (+)NCBIUU_Cfam_GSD_1.0
Fbxw11
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721394,508,434 - 94,619,239 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366093,256,657 - 3,341,994 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366093,256,658 - 3,341,918 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FBXW11
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1652,212,607 - 52,337,913 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11652,212,401 - 52,337,893 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21656,561,220 - 56,654,277 (-)NCBISscrofa10.2Sscrofa10.2susScr3
FBXW11
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12374,015,964 - 74,154,285 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2374,015,964 - 74,154,062 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660344,473,459 - 4,624,970 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Fbxw11
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473317,985,546 - 18,121,398 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Fbxw11
3320 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2665
Count of miRNA genes:626
Interacting mature miRNAs:779
Transcripts:ENSMUST00000076383, ENSMUST00000093205, ENSMUST00000109366, ENSMUST00000137898, ENSMUST00000143290
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357844Si5lq5_mserum IGFBP-5 level QTL 5 (mouse)Not determined112816587362165976Mouse
1302171Pgia28_mproteoglycan induced arthritis 28 (mouse)Not determined11890609742906218Mouse
1357720Kidpq1_mkidney weight percentage QTL 1 (mouse)Not determined111226863768500330Mouse
1357851Scfq3_msubcutaneous fat pad weight QTL 3 (mouse)Not determined111226863768500330Mouse
12910804Pwbwq16_mpost-weaning body weight QTL 16 (mouse)112719805750636094Mouse
12910806Pwbwq15_mpost-weaning body weight QTL 15 (mouse)112719805750636094Mouse
12910801Pwbwq14_mpost-weaning body weight QTL 14 (mouse)112719805750636094Mouse
27226762Feml21_mfemur length 21, 16 week (mouse)111175000065990826Mouse
4141470Egq4_mearly growth QTL 4 (mouse)Not determined1226863768500330Mouse
1301426Desp2_mdespair 2 (mouse)Not determined112870858162708700Mouse
13524844Ppiq9_mprepulse inhibition QTL 9 (mouse)11904999735077325Mouse
4142109W10q2_mweight 10 weeks QTL 2 (mouse)Not determined1226863768500330Mouse
12910817Pwgrq20_mpost-weaning growth rate QTL 20 (mouse)112719805750636094Mouse
1301814Bbaa7_mB.burgdorferi-associated arthritis 7 (mouse)Not determined112601178044264695Mouse
13208559Wght10_mweight 10 (mouse)11395000088890826Mouse
10412216Eae44_mexperimental allergic encephalomyelitis susceptibility 44 (mouse)Not determined111226863739950840Mouse
13208558Lgth12_mbody length 12 (mouse)11395000094890826Mouse
12910818Ogrq5_moverall growth rate QTL 5 (mouse)112719805750636094Mouse
26884401Huml4_mhumerus length 4, 10 week (mouse)111155000068490826Mouse
10053687Eae6_msusceptibility to experimental allergic encephalomyelitis 6 (mouse)Not determined111778196668500330Mouse
27226798Scvln18_msacral vertebrae length 2, 16 week (mouse)11325000060690826Mouse
4141582Lgaq1_mlate growth adjusted QTL 1 (mouse)Not determined1226863768500330Mouse
4141966Tailq1_mtail length QTL 1 (mouse)Not determined1226863768500330Mouse
1558945Orgwq8_morgan weight QTL 8 (mouse)Not determined111705617567078411Mouse
4142216Lgq1_mlate growth QTL 1 (mouse)Not determined1226863768500330Mouse
1300905Scc6_mcolon tumor susceptibility 6 (mouse)Not determined11688027789019734Mouse
14746971Manh70_mmandible shape 70 (mouse)111990589053905890Mouse
13524848Ppiq7_mprepulse inhibition QTL 7 (mouse)112856914762569147Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112268637118022724Mouse
11059563Lmr31_mleishmaniasis resistance 31 (mouse)113210057766100694Mouse
26884446Sklq10_mskull length QTL 10, 10 week (mouse)11325000062890826Mouse
4141047Nilac1_mnicotine induced locomotor activity 1 (mouse)Not determined11901178043011942Mouse
10412246Dfs2_mdental fluorosis suseptibility 2 (mouse)Not determined112180736495881231Mouse
1559002Lmrq4_mLeishmania major resistance QTL 4 (mouse)Not determined111226863769684947Mouse
1300938Bulb3_mbulb size 3 (mouse)Not determined111857861652578716Mouse
1357518Tgyl1_mtriglyceride level 1 (mouse)Not determined11688027733916219Mouse
4142308W6q3_mweight 6 weeks QTL 3 (mouse)Not determined111226863768500330Mouse
1357640Orq2_movulation rate QTL 2 (mouse)Not determined111226863768500330Mouse
1300599Cocrb11_mcocaine related behavior 11 (mouse)Not determined11267035536671472Mouse
1357437Epfq4_mepididymal fat pad weight QTL 4 (mouse)Not determined111226863768500330Mouse
4141398Tgq22_mtriglyceride QTL 22 (mouse)Not determined2116340655163406Mouse
27226741Metcl5_mmetatarsal-calcaneal length 5, 5 week (mouse)11465000046290827Mouse
1300607Tnbs2_mtri-nitrobenzene sulfonic acid susceptible 2 (mouse)Not determined112489805235126680Mouse
1300990Bits3_mbitterness sensitivity 3 (mouse)Not determined11837212142372260Mouse
27226738Metcl11_mmetatarsal-calcaneal length 11, 10 week (mouse)11885000061390826Mouse
11522752Cocia18_mcocaine-induced activity, QTL 18 (mouse)113100820965008209Mouse
27226735Metcl16_mmetatarsal-calcaneal length 16, 16 week (mouse)11525000035090827Mouse
12801459Leuf1_mleukocyte filtration 1 (mouse)111857861652578716Mouse
1300579Thypr1_mthymocyte proliferative response 1 (mouse)Not determined111928257753282715Mouse
10044008Hbnr15_mHeligmosomoides bakeri nematode resistance 15 (mouse)Not determined1122705234227232Mouse
12801457Intmrm2_mintima/media ratio modifier 2 (mouse)111857861652578716Mouse
25394551Skmw70_mskeletal muscle weight 70, EDL (mouse)113132273732594975Mouse
25394550Skmw71_mskeletal muscle weight 71, gastroc (mouse)113127543232745567Mouse
12801460Intim2_mintima modifier 2 (mouse)111857861652578716Mouse
27095909Scvln6_msacral vertebrae length 2, 5 week (mouse)11325000044090827Mouse
4141127W3q4_mweight 3 weeks QTL 4 (mouse)Not determined1226863768500330Mouse
4141894Nidd6k_mNidd6 on KK-A (mouse)Not determined1912420496897826Mouse
13463479Mchq19_mmean corpuscular hemoglobin QTL 19 (mouse)111095123244951464Mouse
27095904Scvln12_msacral vertebrae length 2, 10 week (mouse)11325000034495048Mouse
13463472Mcvq15_mmean corpuscular volume QTL 15 (mouse)111095123244951464Mouse
25394558Skmw72_mskeletal muscle weight 72, soleus (mouse)113132943032785551Mouse
26884453Sklq16_mskull length QTL 16, 16 week (mouse)11325000072690826Mouse
10044006Hbnr13_mHeligmosomoides bakeri nematode resistance 13 (mouse)Not determined112577262659772741Mouse

Markers in Region
RH126984  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381132,730,071 - 32,730,270UniSTSGRCm38
MGSCv371132,630,071 - 32,630,270UniSTSGRCm37
Celera1135,147,568 - 35,147,767UniSTS
Cytogenetic Map11A4UniSTS
Whitehead/MRC_RH11466.08UniSTS
AA536858  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381132,744,669 - 32,744,750UniSTSGRCm38
MGSCv371132,644,669 - 32,644,750UniSTSGRCm37
Celera1135,162,111 - 35,162,192UniSTS
Cytogenetic Map11A4UniSTS
Whitehead/MRC_RH11487.74UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001271347 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001271348 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001271349 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001363353 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001363354 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001363355 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_134015 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006514433 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB093260 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK010033 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK041532 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK135210 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK149139 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK152181 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK160086 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK166226 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168667 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK178514 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK178666 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK179454 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK179700 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK186752 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK190215 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK190488 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK196370 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK201144 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK205412 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK207541 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK210303 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK213240 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK213659 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK215208 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK216067 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK217577 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK218026 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK218380 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK218523 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK219433 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK219895 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL669844 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL669951 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY038079 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC008552 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC020342 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC034261 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CA326854 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CB526764 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466604 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000076383   ⟹   ENSMUSP00000075721
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1132,592,875 - 32,696,816 (+)Ensembl
GRCm38.p6 Ensembl1132,642,875 - 32,746,816 (+)Ensembl
Ensembl Acc Id: ENSMUST00000093205   ⟹   ENSMUSP00000090893
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1132,592,866 - 32,696,789 (+)Ensembl
GRCm38.p6 Ensembl1132,642,866 - 32,746,789 (+)Ensembl
Ensembl Acc Id: ENSMUST00000109366   ⟹   ENSMUSP00000104991
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1132,592,724 - 32,696,569 (+)Ensembl
GRCm38.p6 Ensembl1132,642,724 - 32,746,569 (+)Ensembl
Ensembl Acc Id: ENSMUST00000137898
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1132,592,784 - 32,602,904 (+)Ensembl
GRCm38.p6 Ensembl1132,642,784 - 32,652,904 (+)Ensembl
Ensembl Acc Id: ENSMUST00000143290   ⟹   ENSMUSP00000116834
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1132,592,904 - 32,670,574 (+)Ensembl
GRCm38.p6 Ensembl1132,642,904 - 32,720,574 (+)Ensembl
RefSeq Acc Id: NM_001271347   ⟹   NP_001258276
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391132,592,758 - 32,696,816 (+)NCBI
GRCm381132,642,555 - 32,746,816 (+)NCBI
Celera1135,061,584 - 35,164,258 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001271348   ⟹   NP_001258277
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391132,592,758 - 32,696,816 (+)NCBI
GRCm381132,642,555 - 32,746,816 (+)NCBI
Celera1135,061,584 - 35,164,258 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001271349   ⟹   NP_001258278
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391132,592,758 - 32,696,816 (+)NCBI
GRCm381132,642,555 - 32,746,816 (+)NCBI
Celera1135,061,584 - 35,164,258 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001363353   ⟹   NP_001350282
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391132,592,758 - 32,696,816 (+)NCBI
GRCm381132,642,555 - 32,746,816 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001363354   ⟹   NP_001350283
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391132,592,758 - 32,696,816 (+)NCBI
GRCm381132,642,555 - 32,746,816 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001363355   ⟹   NP_001350284
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391132,592,758 - 32,696,816 (+)NCBI
GRCm381132,642,555 - 32,746,816 (+)NCBI
Sequence:
RefSeq Acc Id: NM_134015   ⟹   NP_598776
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391132,592,758 - 32,696,816 (+)NCBI
GRCm381132,642,555 - 32,746,816 (+)NCBI
MGSCv371132,542,875 - 32,646,816 (+)RGD
Celera1135,061,584 - 35,164,258 (+)NCBI
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006514433   ⟹   XP_006514496
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391132,592,595 - 32,696,788 (+)NCBI
GRCm381132,642,595 - 32,746,717 (+)NCBI
Sequence:
RefSeq Acc Id: NP_598776   ⟸   NM_134015
- Peptide Label: isoform a
- UniProtKB: Q8CHD5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001258277   ⟸   NM_001271348
- Peptide Label: isoform c
- UniProtKB: Q8CHD5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001258278   ⟸   NM_001271349
- Peptide Label: isoform d
- UniProtKB: Q8CHD5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001258276   ⟸   NM_001271347
- Peptide Label: isoform b
- UniProtKB: Q8K022 (UniProtKB/Swiss-Prot),   Q8BY90 (UniProtKB/Swiss-Prot),   Q3TLZ8 (UniProtKB/Swiss-Prot),   Q3TGM9 (UniProtKB/Swiss-Prot),   Q923H0 (UniProtKB/Swiss-Prot),   Q5SRY7 (UniProtKB/Swiss-Prot),   Q8CHD5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006514496   ⟸   XM_006514433
- Peptide Label: isoform X1
- UniProtKB: Q8CHD5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001350282   ⟸   NM_001363353
- Peptide Label: isoform e
- UniProtKB: Q8CHD5 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001350283   ⟸   NM_001363354
- Peptide Label: isoform f
- UniProtKB: Q8CHD5 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001350284   ⟸   NM_001363355
- Peptide Label: isoform g
- UniProtKB: Q8CHD5 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSMUSP00000116834   ⟸   ENSMUST00000143290
Ensembl Acc Id: ENSMUSP00000090893   ⟸   ENSMUST00000093205
Ensembl Acc Id: ENSMUSP00000075721   ⟸   ENSMUST00000076383
Ensembl Acc Id: ENSMUSP00000104991   ⟸   ENSMUST00000109366
Protein Domains
F-box

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q5SRY7-F1-model_v2 AlphaFold Q5SRY7 1-542 view protein structure

Promoters
RGD ID:6821310
Promoter ID:MM_KWN:6890
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000076383,   OTTMUST00000012014,   OTTMUST00000012015,   UC007IJV.1,   UC007IJW.1,   UC007IJY.1,   UC007IJZ.1,   UC007IKA.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361132,542,281 - 32,542,847 (+)MPROMDB
RGD ID:8674250
Promoter ID:EPDNEW_M15156
Type:initiation region
Name:Fbxw11_2
Description:Mus musculus F-box and WD-40 domain protein 11 , transcript variant4, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M15157  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381132,642,530 - 32,642,590EPDNEW
RGD ID:8674252
Promoter ID:EPDNEW_M15157
Type:initiation region
Name:Fbxw11_1
Description:Mus musculus F-box and WD-40 domain protein 11 , transcript variant4, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M15156  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381132,642,758 - 32,642,818EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2144023 AgrOrtholog
Ensembl Genes ENSMUSG00000020271 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000076383 ENTREZGENE
  ENSMUST00000076383.8 UniProtKB/Swiss-Prot
  ENSMUST00000093205 ENTREZGENE
  ENSMUST00000093205.13 UniProtKB/Swiss-Prot
  ENSMUST00000109366 ENTREZGENE
  ENSMUST00000109366.8 UniProtKB/Swiss-Prot
  ENSMUST00000143290.2 UniProtKB/TrEMBL
Gene3D-CATH 1.20.1280.50 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.130.10.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  6.10.250.1840 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Beta-TrCP_D UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  F-box-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  F-box_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  G-protein_beta_WD-40_rep UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD-F-box_domain-protein UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40/YVTN_repeat-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40_repeat UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40_repeat_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40_repeat_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:103583 UniProtKB/Swiss-Prot
MGD MGI:2144023 ENTREZGENE
NCBI Gene 103583 ENTREZGENE
PANTHER F-BOX AND WD REPEAT DOMAIN-CONTAINING 11-B UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40 REPEAT PF20 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Beta-TrCP_D UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  F-box-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Fbxw11 PhenoGen
PRINTS GPROTEINBRPT UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE FBOX UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD_REPEATS_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD_REPEATS_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD_REPEATS_REGION UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART Beta-TrCP_D UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FBOX UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF50978 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF81383 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt F7BGU3_MOUSE UniProtKB/TrEMBL
  FBW1B_MOUSE UniProtKB/Swiss-Prot
  Q3TGM9 ENTREZGENE
  Q3TLZ8 ENTREZGENE
  Q5SRY7 ENTREZGENE
  Q8BY90 ENTREZGENE
  Q8CHD5 ENTREZGENE, UniProtKB/TrEMBL
  Q8K022 ENTREZGENE
  Q922C7_MOUSE UniProtKB/TrEMBL
  Q923H0 ENTREZGENE
UniProt Secondary Q3TGM9 UniProtKB/Swiss-Prot
  Q3TLZ8 UniProtKB/Swiss-Prot
  Q8BY90 UniProtKB/Swiss-Prot
  Q8K022 UniProtKB/Swiss-Prot
  Q923H0 UniProtKB/Swiss-Prot