Imported Disease Annotations - OMIMObject Symbol | Species | Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Fbxw11 | Mouse | NEURODEVELOPMENTAL, JAW, EYE, AND DIGITAL SYNDROME | | ISO | FBXW11 (Homo sapiens) | 7240710 | | OMIM | | |
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Imported Disease Annotations - OMIMObject Symbol | Species | Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Fbxw11 | Mouse | NEURODEVELOPMENTAL, JAW, EYE, AND DIGITAL SYNDROME | | ISO | FBXW11 (Homo sapiens) | 7240710 | | OMIM | | |
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# | Reference Title | Reference Citation |
1. | Systematic analysis and nomenclature of mammalian F-box proteins. | Jin J, etal., Genes Dev 2004 Nov 1;18(21):2573-80. |
2. | Functional annotation of a full-length mouse cDNA collection. | Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90. |
3. | MGDs mouse GO annotations | MGD data from the GO Consortium |
4. | Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. | Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73. |
5. | KEGG Annotation Import Pipeline | Pipeline to import KEGG annotations from KEGG into RGD |
6. | PID Annotation Import Pipeline | Pipeline to import Pathway Interaction Database annotations from NCI into RGD |
7. | Mouse MP Annotation Import Pipeline | RGD automated import pipeline |
8. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
PMID:8889548 | PMID:10349636 | PMID:10922068 | PMID:11042159 | PMID:11076861 | PMID:11896578 | PMID:12465718 | PMID:12477932 | PMID:12520002 | PMID:12904583 | PMID:14610273 | PMID:15782199 |
PMID:16141072 | PMID:16141073 | PMID:17636028 | PMID:17967808 | PMID:18287559 | PMID:18782782 | PMID:18799693 | PMID:18929646 | PMID:19515997 | PMID:21267068 | PMID:21677750 | PMID:21873635 |
PMID:22307056 | PMID:24469832 | PMID:26240281 | PMID:26496610 | PMID:28982686 | PMID:29091030 | PMID:29103939 | PMID:30031111 | PMID:30391586 | PMID:31040226 | PMID:32325033 | PMID:32968282 |
PMID:33640602 | PMID:38182068 |
Fbxw11 (Mus musculus - house mouse) |
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FBXW11 (Homo sapiens - human) |
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Fbxw11 (Rattus norvegicus - Norway rat) |
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Fbxw11 (Chinchilla lanigera - long-tailed chinchilla) |
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FBXW11 (Pan paniscus - bonobo/pygmy chimpanzee) |
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FBXW11 (Canis lupus familiaris - dog) |
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Fbxw11 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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FBXW11 (Sus scrofa - pig) |
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FBXW11 (Chlorocebus sabaeus - green monkey) |
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Fbxw11 (Heterocephalus glaber - naked mole-rat) |
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Variants in Fbxw11
3320 total Variants |
The detailed report is available here: | Full Report | CSV | TAB | Printer | ||||
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
The following QTLs overlap with this region. | Full Report | CSV | TAB | Printer | Gviewer |
RH126984 |
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AA536858 |
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RefSeq Transcripts | NM_001271347 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
NM_001271348 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_001271349 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_001363353 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_001363354 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_001363355 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_134015 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006514433 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | AB093260 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
AK010033 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK041532 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK135210 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK149139 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK152181 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK160086 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK166226 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK168667 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK178514 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK178666 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK179454 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK179700 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK186752 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK190215 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK190488 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK196370 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK201144 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK205412 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK207541 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK210303 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK213240 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK213659 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK215208 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK216067 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK217577 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK218026 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK218380 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK218523 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK219433 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK219895 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AL669844 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AL669951 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AY038079 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BC008552 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BC020342 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BC034261 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CA326854 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CB526764 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CH466604 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
Ensembl Acc Id: | ENSMUST00000076383 ⟹ ENSMUSP00000075721 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Ensembl Acc Id: | ENSMUST00000093205 ⟹ ENSMUSP00000090893 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Ensembl Acc Id: | ENSMUST00000109366 ⟹ ENSMUSP00000104991 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Ensembl Acc Id: | ENSMUST00000137898 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Ensembl Acc Id: | ENSMUST00000143290 ⟹ ENSMUSP00000116834 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | NM_001271347 ⟹ NP_001258276 | ||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||
Type: | CODING | ||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | NM_001271348 ⟹ NP_001258277 | ||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||
Type: | CODING | ||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | NM_001271349 ⟹ NP_001258278 | ||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||
Type: | CODING | ||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | NM_001363353 ⟹ NP_001350282 | ||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | NM_001363354 ⟹ NP_001350283 | ||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | NM_001363355 ⟹ NP_001350284 | ||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | NM_134015 ⟹ NP_598776 | ||||||||||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006514433 ⟹ XP_006514496 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
Protein RefSeqs | NP_001258276 | (Get FASTA) | NCBI Sequence Viewer |
NP_001258277 | (Get FASTA) | NCBI Sequence Viewer | |
NP_001258278 | (Get FASTA) | NCBI Sequence Viewer | |
NP_001350282 | (Get FASTA) | NCBI Sequence Viewer | |
NP_001350283 | (Get FASTA) | NCBI Sequence Viewer | |
NP_001350284 | (Get FASTA) | NCBI Sequence Viewer | |
NP_598776 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006514496 | (Get FASTA) | NCBI Sequence Viewer | |
GenBank Protein | AAH08552 | (Get FASTA) | NCBI Sequence Viewer |
AAH34261 | (Get FASTA) | NCBI Sequence Viewer | |
AAK72095 | (Get FASTA) | NCBI Sequence Viewer | |
BAC30975 | (Get FASTA) | NCBI Sequence Viewer | |
BAC41444 | (Get FASTA) | NCBI Sequence Viewer | |
BAE28749 | (Get FASTA) | NCBI Sequence Viewer | |
BAE31012 | (Get FASTA) | NCBI Sequence Viewer | |
BAE35617 | (Get FASTA) | NCBI Sequence Viewer | |
BAE38644 | (Get FASTA) | NCBI Sequence Viewer | |
BAE40519 | (Get FASTA) | NCBI Sequence Viewer | |
EDL23750 | (Get FASTA) | NCBI Sequence Viewer | |
Ensembl Protein | ENSMUSP00000075721 | ||
ENSMUSP00000075721.8 | |||
ENSMUSP00000090893 | |||
ENSMUSP00000090893.7 | |||
ENSMUSP00000104991 | |||
ENSMUSP00000104991.2 | |||
ENSMUSP00000116834.2 | |||
GenBank Protein | Q5SRY7 | (Get FASTA) | NCBI Sequence Viewer |
RefSeq Acc Id: | NP_598776 ⟸ NM_134015 |
- Peptide Label: | isoform a |
- UniProtKB: | Q8CHD5 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | NP_001258277 ⟸ NM_001271348 |
- Peptide Label: | isoform c |
- UniProtKB: | Q8CHD5 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | NP_001258278 ⟸ NM_001271349 |
- Peptide Label: | isoform d |
- UniProtKB: | Q8CHD5 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | NP_001258276 ⟸ NM_001271347 |
- Peptide Label: | isoform b |
- UniProtKB: | Q8K022 (UniProtKB/Swiss-Prot), Q8BY90 (UniProtKB/Swiss-Prot), Q3TLZ8 (UniProtKB/Swiss-Prot), Q3TGM9 (UniProtKB/Swiss-Prot), Q923H0 (UniProtKB/Swiss-Prot), Q5SRY7 (UniProtKB/Swiss-Prot), Q8CHD5 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_006514496 ⟸ XM_006514433 |
- Peptide Label: | isoform X1 |
- UniProtKB: | Q8CHD5 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | NP_001350282 ⟸ NM_001363353 |
- Peptide Label: | isoform e |
- UniProtKB: | Q8CHD5 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | NP_001350283 ⟸ NM_001363354 |
- Peptide Label: | isoform f |
- UniProtKB: | Q8CHD5 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | NP_001350284 ⟸ NM_001363355 |
- Peptide Label: | isoform g |
- UniProtKB: | Q8CHD5 (UniProtKB/TrEMBL) |
Ensembl Acc Id: | ENSMUSP00000116834 ⟸ ENSMUST00000143290 |
Ensembl Acc Id: | ENSMUSP00000090893 ⟸ ENSMUST00000093205 |
Ensembl Acc Id: | ENSMUSP00000075721 ⟸ ENSMUST00000076383 |
Ensembl Acc Id: | ENSMUSP00000104991 ⟸ ENSMUST00000109366 |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-Q5SRY7-F1-model_v2 | AlphaFold | Q5SRY7 | 1-542 | view protein structure |
RGD ID: | 6821310 | ||||||||
Promoter ID: | MM_KWN:6890 | ||||||||
Type: | CpG-Island | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | MPROMDB | ||||||||
Tissues & Cell Lines: | 3T3L1_Day0, 3T3L1_Day1, 3T3L1_Day3, 3T3L1_Day4, 3T3L1_Day6, BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, ES_Cell, Kidney, Liver, Lung, MEF_B4, MEF_B6, Spleen | ||||||||
Transcripts: | ENSMUST00000076383, OTTMUST00000012014, OTTMUST00000012015, UC007IJV.1, UC007IJW.1, UC007IJY.1, UC007IJZ.1, UC007IKA.1 | ||||||||
Position: |
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RGD ID: | 8674250 | ||||||||
Promoter ID: | EPDNEW_M15156 | ||||||||
Type: | initiation region | ||||||||
Name: | Fbxw11_2 | ||||||||
Description: | Mus musculus F-box and WD-40 domain protein 11 , transcript variant4, mRNA. | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Alternative Promoters: | null; see alsoEPDNEW_M15157 | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
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RGD ID: | 8674252 | ||||||||
Promoter ID: | EPDNEW_M15157 | ||||||||
Type: | initiation region | ||||||||
Name: | Fbxw11_1 | ||||||||
Description: | Mus musculus F-box and WD-40 domain protein 11 , transcript variant4, mRNA. | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Alternative Promoters: | null; see alsoEPDNEW_M15156 | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
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Database | Acc Id | Source(s) |
AGR Gene | MGI:2144023 | AgrOrtholog |
Ensembl Genes | ENSMUSG00000020271 | Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Ensembl Transcript | ENSMUST00000076383 | ENTREZGENE |
ENSMUST00000076383.8 | UniProtKB/Swiss-Prot | |
ENSMUST00000093205 | ENTREZGENE | |
ENSMUST00000093205.13 | UniProtKB/Swiss-Prot | |
ENSMUST00000109366 | ENTREZGENE | |
ENSMUST00000109366.8 | UniProtKB/Swiss-Prot | |
ENSMUST00000143290.2 | UniProtKB/TrEMBL | |
Gene3D-CATH | 1.20.1280.50 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
2.130.10.10 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
6.10.250.1840 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
InterPro | Beta-TrCP_D | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
F-box-like_dom_sf | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
F-box_dom | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
G-protein_beta_WD-40_rep | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
WD-F-box_domain-protein | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
WD40/YVTN_repeat-like_dom_sf | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
WD40_repeat | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
WD40_repeat_CS | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
WD40_repeat_dom_sf | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
KEGG Report | mmu:103583 | UniProtKB/Swiss-Prot |
MGD | MGI:2144023 | ENTREZGENE |
NCBI Gene | 103583 | ENTREZGENE |
PANTHER | F-BOX AND WD REPEAT DOMAIN-CONTAINING 11-B | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
WD40 REPEAT PF20 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Pfam | Beta-TrCP_D | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
F-box-like | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
WD40 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
PhenoGen | Fbxw11 | PhenoGen |
PRINTS | GPROTEINBRPT | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
PROSITE | FBOX | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
WD_REPEATS_1 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
WD_REPEATS_2 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
WD_REPEATS_REGION | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
SMART | Beta-TrCP_D | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
FBOX | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
WD40 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Superfamily-SCOP | SSF50978 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
SSF81383 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
UniProt | F7BGU3_MOUSE | UniProtKB/TrEMBL |
FBW1B_MOUSE | UniProtKB/Swiss-Prot | |
Q3TGM9 | ENTREZGENE | |
Q3TLZ8 | ENTREZGENE | |
Q5SRY7 | ENTREZGENE | |
Q8BY90 | ENTREZGENE | |
Q8CHD5 | ENTREZGENE, UniProtKB/TrEMBL | |
Q8K022 | ENTREZGENE | |
Q922C7_MOUSE | UniProtKB/TrEMBL | |
Q923H0 | ENTREZGENE | |
UniProt Secondary | Q3TGM9 | UniProtKB/Swiss-Prot |
Q3TLZ8 | UniProtKB/Swiss-Prot | |
Q8BY90 | UniProtKB/Swiss-Prot | |
Q8K022 | UniProtKB/Swiss-Prot | |
Q923H0 | UniProtKB/Swiss-Prot |