Ctnna2 (catenin (cadherin associated protein), alpha 2) - Rat Genome Database
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Gene: Ctnna2 (catenin (cadherin associated protein), alpha 2) Mus musculus
Analyze
Symbol: Ctnna2
Name: catenin (cadherin associated protein), alpha 2
RGD ID: 1619285
MGI Page MGI
Description: Exhibits identical protein binding activity. Involved in several processes, including modification of postsynaptic actin cytoskeleton; nervous system development; and prepulse inhibition. Localizes to several cellular components, including extrinsic component of synaptic membrane; hippocampal mossy fiber to CA3 synapse; and parallel fiber to Purkinje cell synapse. Is expressed in several structures, including alimentary system; genitourinary system; nervous system; respiratory system; and sensory organ. Human ortholog(s) of this gene implicated in complex cortical dysplasia with other brain malformations. Orthologous to human CTNNA2 (catenin alpha 2); PARTICIPATES IN arrhythmogenic right ventricular cardiomyopathy pathway; endometrial cancer pathway; INTERACTS WITH 17alpha-ethynylestradiol; 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: AI481747; alpha N-catenin; alpha(N)-catenin; Ca; cadherin associated protein; Cat; catenin alpha 2; catenin alpha-2; Catna; Catna2; cdf; cerebellar deficient folia; ch; chp
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: Gm5653  
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39676,858,620 - 77,956,798 (-)NCBIGRCm39mm39
GRCm38676,881,637 - 77,979,815 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl676,881,637 - 77,979,699 (-)EnsemblGRCm38mm10GRCm38
MGSCv37676,831,631 - 77,929,661 (-)NCBIGRCm37mm9NCBIm37
MGSCv36676,811,161 - 77,909,097 (-)NCBImm8
Celera678,902,485 - 80,006,681 (-)NCBICelera
Cytogenetic Map6C3NCBI
cM Map633.54NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

Additional References at PubMed
PMID:1638632   PMID:2349235   PMID:2788574   PMID:7590232   PMID:7626889   PMID:7925023   PMID:7982500   PMID:8146202   PMID:8174789   PMID:8432524   PMID:8575293   PMID:8821035  
PMID:8853988   PMID:8909549   PMID:9060409   PMID:9370228   PMID:9811942   PMID:9837810   PMID:9950951   PMID:10349636   PMID:10882138   PMID:11013084   PMID:11042159   PMID:11076861  
PMID:11217851   PMID:11413545   PMID:11591818   PMID:11781569   PMID:11835672   PMID:12052883   PMID:12068957   PMID:12089526   PMID:12123610   PMID:12466851   PMID:12477932   PMID:12695331  
PMID:12975353   PMID:14657280   PMID:14681479   PMID:15034585   PMID:15345747   PMID:15489334   PMID:15630473   PMID:15775979   PMID:16141072   PMID:16141073   PMID:16185771   PMID:16235133  
PMID:16420439   PMID:16452087   PMID:16457793   PMID:16466397   PMID:16543460   PMID:16641223   PMID:16691566   PMID:16923961   PMID:17114649   PMID:17222817   PMID:17989230   PMID:18397997  
PMID:18614564   PMID:18775424   PMID:19129494   PMID:19321785   PMID:20620871   PMID:21267068   PMID:21844209   PMID:21873635   PMID:21991385   PMID:22802532   PMID:23417122   PMID:23480356  
PMID:23589308   PMID:23816618   PMID:24080911   PMID:24095903   PMID:26255771   PMID:26929452   PMID:27507650   PMID:27889896   PMID:27913639   PMID:28634551   PMID:28671696   PMID:28692740  
PMID:28706196   PMID:28793255   PMID:29254152   PMID:30297418   PMID:30452639   PMID:30923192   PMID:32325033   PMID:32541003   PMID:32640236  


Genomics

Comparative Map Data
Ctnna2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39676,858,620 - 77,956,798 (-)NCBIGRCm39mm39
GRCm38676,881,637 - 77,979,815 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl676,881,637 - 77,979,699 (-)EnsemblGRCm38mm10GRCm38
MGSCv37676,831,631 - 77,929,661 (-)NCBIGRCm37mm9NCBIm37
MGSCv36676,811,161 - 77,909,097 (-)NCBImm8
Celera678,902,485 - 80,006,681 (-)NCBICelera
Cytogenetic Map6C3NCBI
cM Map633.54NCBI
CTNNA2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl279,185,231 - 80,648,861 (+)EnsemblGRCh38hg38GRCh38
GRCh38279,505,054 - 80,648,788 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37279,740,177 - 80,875,905 (+)NCBIGRCh37GRCh37hg19GRCh37
GRCh37279,740,060 - 80,875,993 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36279,593,634 - 80,729,416 (+)NCBINCBI36hg18NCBI36
Build 34279,651,780 - 80,787,562NCBI
Celera279,568,796 - 80,704,725 (+)NCBI
Cytogenetic Map2p12NCBI
HuRef279,475,616 - 80,610,857 (+)NCBIHuRef
CHM1_1279,669,347 - 80,805,984 (+)NCBICHM1_1
Ctnna2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.24109,293,978 - 110,443,413 (-)NCBI
Rnor_6.0 Ensembl4107,881,826 - 108,008,484 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.04107,880,611 - 109,042,724 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04172,586,790 - 173,745,983 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44110,747,551 - 111,922,482 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.14111,016,614 - 112,035,932 (-)NCBI
Celera498,339,981 - 99,476,551 (-)NCBICelera
Cytogenetic Map4q33NCBI
Ctnna2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554245,986,073 - 6,911,826 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554245,985,170 - 7,055,830 (-)NCBIChiLan1.0ChiLan1.0
CTNNA2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.12A81,158,206 - 82,308,244 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A81,303,559 - 82,307,258 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v02A79,594,694 - 80,745,885 (+)NCBIMhudiblu_PPA_v0panPan3
CTNNA2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl1743,472,923 - 44,557,766 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.11743,472,346 - 44,504,881 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Ctnna2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049365565,205,481 - 6,271,304 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CTNNA2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1363,205,073 - 64,417,990 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2366,285,690 - 66,567,714 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CTNNA2
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11426,579,012 - 27,729,581 (-)NCBI
ChlSab1.1 Ensembl1426,578,896 - 26,836,423 (-)Ensembl
Ctnna2
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462474922,332,750 - 23,546,165 (-)NCBI

Position Markers
G54339  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38676,995,180 - 76,995,558UniSTSGRCm38
MGSCv37676,945,174 - 76,945,552UniSTSGRCm37
Celera679,019,521 - 79,019,899UniSTS
Cytogenetic Map6B3-DUniSTS
G54327  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38677,745,634 - 77,745,764UniSTSGRCm38
MGSCv37677,695,628 - 77,695,758UniSTSGRCm37
Celera679,772,585 - 79,772,715UniSTS
Cytogenetic Map6B3-DUniSTS
G54328  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38677,771,276 - 77,771,542UniSTSGRCm38
MGSCv37677,721,270 - 77,721,536UniSTSGRCm37
Celera679,798,375 - 79,798,641UniSTS
Cytogenetic Map6B3-DUniSTS
Results_ER_8_28_95_1___175.seq  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38676,979,141 - 76,979,308UniSTSGRCm38
MGSCv37676,929,135 - 76,929,302UniSTSGRCm37
Celera679,002,035 - 79,002,202UniSTS
Cytogenetic Map6B3-DUniSTS
Whitehead_YAC6 UniSTS
mHAa23g11.seq  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38677,898,755 - 77,898,954UniSTSGRCm38
MGSCv37677,848,749 - 77,848,948UniSTSGRCm37
Celera679,925,872 - 79,926,071UniSTS
Cytogenetic Map6B3-DUniSTS
Whitehead_YAC6 UniSTS
D6Mit19  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38677,554,468 - 77,554,666UniSTSGRCm38
MGSCv37677,504,462 - 77,504,660UniSTSGRCm37
Celera679,586,007 - 79,586,183UniSTS
Cytogenetic Map6B3-DUniSTS
cM Map633.5UniSTS
Whitehead Genetic623.0UniSTS
Whitehead_YAC6 UniSTS
D6Mit246  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38677,746,557 - 77,746,664UniSTSGRCm38
MGSCv37677,696,551 - 77,696,658UniSTSGRCm37
Celera679,773,508 - 79,773,615UniSTS
Cytogenetic Map6B3-DUniSTS
cM Map632.5UniSTS
Whitehead Genetic621.9UniSTS
Whitehead_YAC6 UniSTS
D6Mit361  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38677,057,680 - 77,057,799UniSTSGRCm38
MGSCv37677,007,674 - 77,007,793UniSTSGRCm37
Celera679,082,116 - 79,082,238UniSTS
Cytogenetic Map6B3-DUniSTS
cM Map635.2UniSTS
Whitehead Genetic624.0UniSTS
D25282  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map6B3-DUniSTS
Whitehead/MRC_RH6781.24UniSTS
UniSTS:235472  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38677,483,843 - 77,484,057UniSTSGRCm38
MGSCv37677,433,837 - 77,434,051UniSTSGRCm37
Celera679,513,906 - 79,514,120UniSTS
Cytogenetic Map6B3-DUniSTS
AW125451  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38677,245,123 - 77,245,258UniSTSGRCm38
MGSCv37677,195,117 - 77,195,252UniSTSGRCm37
Celera679,275,962 - 79,276,097UniSTS
Cytogenetic Map6B3-DUniSTS
Cytogenetic Map6C3UniSTS
Ctnna2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map6B3-DUniSTS
cM Map634.2UniSTS
d4rat97  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38677,136,584 - 77,136,809UniSTSGRCm38
MGSCv37677,086,578 - 77,086,803UniSTSGRCm37
Cytogenetic Map6B3-DUniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
25440480Moaq2_mmodifier of alien QTL 2 (mouse)61117500000Mouse
26884414Bzwq12_mbi-zygomatic width QTL 12, 16 week (mouse)63400000139100000Mouse
1300556Cia6_mcollagen induced arthritis QTL 6 (mouse)Not determined6446488487426034Mouse
4142126W3q3_mweight 3 weeks QTL 3 (mouse)Not determined450382396656149Mouse
4142361W10q11_mweight 10 weeks QTL 11 (mouse)Not determined450382396656149Mouse
4142271Egq8_mearly growth QTL 8 (mouse)Not determined450382396656149Mouse
4142232W6q4_mweight 6 weeks QTL 4 (mouse)Not determined450382396656149Mouse
26884441Sklq3_mskull length QTL 3, 5 week (mouse)6760000080600000Mouse
13208564Bmiq7_mbody mass index QTL 7 (mouse)62500000080000000Mouse
4141782Mrdq5_mmodifier of retinal degeneration QTL 5 (mouse)Not determined3285065078238974Mouse
1558984Cplaq9_mcircadian period of locomotor activity 9 (mouse)Not determined63866962592607450Mouse
12910785Pwgrq16_mpost-weaning growth rate QTL 16 (mouse)64382681377811523Mouse
12910798Pwgrq5_mpre-weaning growth rate QTL 5 (mouse)64382681377811523Mouse
12910802Pwbwq12_mpost-weaning body weight QTL 12 (mouse)64382681377811523Mouse
12910807Pwbwq11_mpost-weaning body weight QTL 11 (mouse)64382681377811523Mouse
12910809Pwbwq10_mpost-weaning body weight QTL 10 (mouse)64382681377811523Mouse
12910820Ogrq3_moverall growth rate QTL 3 (mouse)64382681377811523Mouse
1300618Pgia19_mproteoglycan induced arthritis 19 (mouse)Not determined64531405987426034Mouse
10412157Fl1n_mfatty liver 1 in NSY (mouse)Not determined645314059128835032Mouse
4142259Tabw2_mtally ho associated body weight 2 (mouse)Not determined46935985136423692Mouse
25314319Histh6_mhistamine hypersensitivity 6 (mouse)648720000125360000Mouse
25314320Histh5_mhistamine hypersensitivity 5 (mouse)648720000148450000Mouse
1301962Eila2_methanol induced locomotor activity 2 (mouse)Not determined648726556125356785Mouse
1301254Skts11_mskin tumor susceptibility 11 (mouse)Not determined65117915085179300Mouse
1357683Igf1sl1_mIGF-1 serum levels 1 (mouse)Not determined652161713116155267Mouse
4141028Mclr_mmethylcholanthrene lymphoma resistance (mouse)Not determined5437342788379171Mouse
15039373Adip28_madiposity 28 (mouse)65630821190308211Mouse
15039375Bw41_mbody weight QTL 41 (mouse)65630821190308211Mouse
1558977Skmw10_mskeletal muscle weight 10 (mouse)Not determined65844758392447710Mouse
10043972Obq28_mobesity QTL 28 (mouse)Not determined65854043392540433Mouse
1301740Bwq2_mbody weight QTL 2 (mouse)Not determined66005768094057799Mouse
1301369Im4_mimmunoregulatory 4 (mouse)Not determined66348473897484905Mouse
1300650Bw18_mbody weight QTL 18 (mouse)Not determined666713869100714031Mouse
1301876Bits2_mbitterness sensitivity 2 (mouse)Not determined670425898104426034Mouse
1301813Skl3_mskeletal size (tail length) 3 (mouse)Not determined670425898104426034Mouse
1301034Egrm2_mearly growth rate (mouse)Not determined670425898104426034Mouse
4141990Etax6_methanol induced ataxia 6 (mouse)Not determined7132262186275719Mouse
1302020Bbaa20_mB.burgdorferi-associated arthritis 20 (mouse)Not determined67132262193464093Mouse
1300869Stheal5_msoft tissue heal 5 (mouse)Not determined671575060105575178Mouse
1300954Fcsa1_mfemoral cross-sectional area 1 (mouse)Not determined671981024105981170Mouse
1301521Pas1c_mpulmonary adenoma susceptibility 1c (mouse)Not determined671981024105981170Mouse
13506930Recrq9_mrecombination rate in male meiosis QTL 9 (mouse)673500000134700000Mouse
1301320Ots1_movarian teratoma susceptibility 1 (mouse)Not determined675447583104503555Mouse
1301571Arrd1_mage-related retinal degeneration 1 (mouse)Not determined67554435692607450Mouse
1300674Nidd3n_mnon-insulin-dependent diabetes mellitus 3 in NSY (mouse)Not determined67554435694225955Mouse
10412195Efw_mepididymal fat weight (mouse)Not determined67554435694225955Mouse
10043901Pfat5_mpredicted fat percentage 5 (mouse)Not determined675607306109607450Mouse
10412208Cypr4_mcytokine production 4 (mouse)Not determined675716503109716697Mouse
1357875Pfat2_mpredicted fat percentage 2 (mouse)Not determined676463949110464093Mouse
14697704Stsl4_mSalmonella typhimurium susceptibility locus 4 (mouse)67710000090000000Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1774
Count of miRNA genes:678
Interacting mature miRNAs:813
Transcripts:ENSMUST00000075340, ENSMUST00000159626, ENSMUST00000160252, ENSMUST00000160894, ENSMUST00000161846, ENSMUST00000162273, ENSMUST00000162991
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001109764 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001355193 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_009819 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_145732 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011241195 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC116787 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC118610 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC121356 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC130220 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC152957 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC153997 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC154000 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC155840 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK035033 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK158916 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC051995 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC079648 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CD578966 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466523 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  D25281 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  D25282 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  LXEJ02009106 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000075340   ⟹   ENSMUSP00000074809
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl676,882,550 - 77,979,560 (-)Ensembl
RefSeq Acc Id: ENSMUST00000159626   ⟹   ENSMUSP00000124376
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl676,881,640 - 77,979,550 (-)Ensembl
RefSeq Acc Id: ENSMUST00000160252
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl677,926,505 - 77,979,585 (-)Ensembl
RefSeq Acc Id: ENSMUST00000160894   ⟹   ENSMUSP00000124764
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl676,881,637 - 77,979,699 (-)Ensembl
RefSeq Acc Id: ENSMUST00000161846   ⟹   ENSMUSP00000123714
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl676,881,637 - 77,979,699 (-)Ensembl
RefSeq Acc Id: ENSMUST00000162273   ⟹   ENSMUSP00000124689
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl677,598,746 - 77,979,560 (-)Ensembl
RefSeq Acc Id: ENSMUST00000162991
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl676,882,756 - 76,902,888 (-)Ensembl
RefSeq Acc Id: ENSMUST00000204527   ⟹   ENSMUSP00000144890
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl676,915,737 - 77,143,943 (-)Ensembl
RefSeq Acc Id: NM_001109764   ⟹   NP_001103234
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39676,858,620 - 77,956,650 (-)NCBI
GRCm38676,881,637 - 77,979,667 (-)NCBI
MGSCv37676,831,631 - 77,929,661 (-)RGD
Celera678,902,485 - 80,006,681 (-)RGD
cM Map6 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001355193   ⟹   NP_001342122
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39676,858,620 - 77,956,650 (-)NCBI
GRCm38676,881,637 - 77,979,667 (-)NCBI
Sequence:
RefSeq Acc Id: NM_009819   ⟹   NP_033949
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39676,858,620 - 77,956,650 (-)NCBI
GRCm38676,881,637 - 77,979,667 (-)NCBI
MGSCv37676,831,631 - 77,929,661 (-)RGD
Celera678,902,485 - 80,006,681 (-)RGD
cM Map6 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_145732   ⟹   NP_663785
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39676,858,620 - 77,956,650 (-)NCBI
GRCm38676,881,637 - 77,979,667 (-)NCBI
MGSCv37676,831,631 - 77,929,661 (-)RGD
Celera678,902,485 - 80,006,681 (-)RGD
cM Map6 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_011241195   ⟹   XP_011239497
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39676,858,620 - 77,956,798 (-)NCBI
GRCm38676,881,637 - 77,979,815 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_033949   ⟸   NM_009819
- Peptide Label: isoform 2
- UniProtKB: Q61301 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_663785   ⟸   NM_145732
- Peptide Label: isoform 1
- UniProtKB: Q61301 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001103234   ⟸   NM_001109764
- Peptide Label: isoform 2
- UniProtKB: Q61301 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011239497   ⟸   XM_011241195
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: NP_001342122   ⟸   NM_001355193
- Peptide Label: isoform 1
RefSeq Acc Id: ENSMUSP00000124376   ⟸   ENSMUST00000159626
RefSeq Acc Id: ENSMUSP00000144890   ⟸   ENSMUST00000204527
RefSeq Acc Id: ENSMUSP00000124764   ⟸   ENSMUST00000160894
RefSeq Acc Id: ENSMUSP00000074809   ⟸   ENSMUST00000075340
RefSeq Acc Id: ENSMUSP00000124689   ⟸   ENSMUST00000162273
RefSeq Acc Id: ENSMUSP00000123714   ⟸   ENSMUST00000161846

Promoters
RGD ID:6839141
Promoter ID:MM_KWN:46515
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:NM_001109764,   NM_009819,   NM_145732,   UC009CJR.1,   UC009CJS.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36677,929,411 - 77,929,911 (-)MPROMDB
RGD ID:6890056
Promoter ID:EPDNEW_M8479
Type:initiation region
Name:Ctnna2_1
Description:Mus musculus catenin , alpha 2 , transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M8480  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38677,979,488 - 77,979,548EPDNEW
RGD ID:6890060
Promoter ID:EPDNEW_M8480
Type:initiation region
Name:Ctnna2_2
Description:Mus musculus catenin , alpha 2 , transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M8479  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38677,979,685 - 77,979,745EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:88275 AgrOrtholog
Ensembl Genes ENSMUSG00000063063 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000074809 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000123714 UniProtKB/Swiss-Prot
  ENSMUSP00000124376 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000124689 UniProtKB/TrEMBL
  ENSMUSP00000124764 UniProtKB/TrEMBL
  ENSMUSP00000144890 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000075340 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000159626 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000160894 UniProtKB/TrEMBL
  ENSMUST00000161846 UniProtKB/Swiss-Prot
  ENSMUST00000162273 UniProtKB/TrEMBL
  ENSMUST00000204527 UniProtKB/TrEMBL
InterPro Alpha-catenin/vinculin-like_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Alpha_catenin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CTNNA1/CTNNA3 UniProtKB/TrEMBL
  CTNNA2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Vinculin/catenin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Vinculin_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:12386 UniProtKB/Swiss-Prot
MGD MGI:88275 ENTREZGENE
NCBI Gene 12386 ENTREZGENE
PANTHER PTHR18914:SF23 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR18914:SF24 UniProtKB/TrEMBL
Pfam Vinculin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Ctnna2 PhenoGen
PRINTS ALPHACATENIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE VINCULIN_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF47220 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0N4SUZ7_MOUSE UniProtKB/TrEMBL
  CTNA2_MOUSE UniProtKB/Swiss-Prot
  E0CXB9_MOUSE UniProtKB/TrEMBL
  Q61301 ENTREZGENE
  Q8BS72_MOUSE UniProtKB/TrEMBL
UniProt Secondary Q3TY37 UniProtKB/Swiss-Prot
  Q61300 UniProtKB/Swiss-Prot
  Q6AXD1 UniProtKB/Swiss-Prot