Selenop (selenoprotein P) - Rat Genome Database

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Gene: Selenop (selenoprotein P) Mus musculus
Analyze
Symbol: Selenop
Name: selenoprotein P
RGD ID: 737592
MGI Page MGI
Description: Enables selenium binding activity. Acts upstream of or within several processes, including brain development; locomotory behavior; and selenium compound metabolic process. Located in extracellular space. Is expressed in several structures, including central nervous system; embryo mesenchyme; extraembryonic component; genitourinary system; and integumental system. Orthologous to human SELENOP (selenoprotein P).
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: AU018766; D15Ucl; D15Ucla1; DNA segment, Chr 15, University of California at Los Angeles 1; plasma selenoprotein P; s; Se; Se-P; selenoprotein P, plasma, 1; selp; seP; Sepp1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39153,300,249 - 3,309,992 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl153,298,029 - 3,309,990 (+)EnsemblGRCm39 Ensembl
GRCm38153,270,767 - 3,280,510 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl153,268,547 - 3,280,508 (+)EnsemblGRCm38mm10GRCm38
MGSCv37153,220,767 - 3,230,508 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36153,220,996 - 3,230,508 (+)NCBIMGSCv36mm8
Celera153,135,278 - 3,145,023 (+)NCBICelera
Cytogenetic Map15A1NCBI
cM Map151.84NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-catechin  (ISO)
(2,4,5-trichlorophenoxy)acetic acid  (EXP)
1,2-dimethylhydrazine  (EXP)
1-naphthyl isothiocyanate  (ISO)
17alpha-ethynylestradiol  (EXP,ISO)
17beta-estradiol  (EXP,ISO)
17beta-estradiol 3-benzoate  (ISO)
17beta-hydroxy-17-methylestra-4,9,11-trien-3-one  (ISO)
17beta-hydroxy-5alpha-androstan-3-one  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (EXP,ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dinitrotoluene  (ISO)
2,6-dinitrotoluene  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
3H-1,2-dithiole-3-thione  (ISO)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (EXP)
5-aza-2'-deoxycytidine  (ISO)
5-fluorouracil  (ISO)
6-propyl-2-thiouracil  (ISO)
7,12-dimethyltetraphene  (ISO)
acetamide  (ISO)
acrylamide  (ISO)
aflatoxin B1  (ISO)
aldehydo-D-glucose  (ISO)
ammonium chloride  (ISO)
Aroclor 1254  (EXP)
arsenous acid  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
beta-lapachone  (ISO)
bis(2-ethylhexyl) phthalate  (EXP)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP,ISO)
bromobenzene  (ISO)
cadmium atom  (EXP,ISO)
cadmium dichloride  (EXP,ISO)
calcitriol  (ISO)
carbon nanotube  (EXP)
cefaloridine  (ISO)
cerium trichloride  (ISO)
chlorpyrifos  (EXP)
clofibrate  (EXP)
clorgyline  (ISO)
colforsin daropate hydrochloride  (ISO)
copper atom  (EXP,ISO)
copper(0)  (EXP,ISO)
copper(II) chloride  (ISO)
copper(II) sulfate  (ISO)
corticosterone  (ISO)
coumestrol  (ISO)
crocidolite asbestos  (ISO)
CU-O LINKAGE  (ISO)
cyclosporin A  (ISO)
D-glucose  (ISO)
DDT  (ISO)
dexamethasone  (EXP,ISO)
diarsenic trioxide  (ISO)
dibutyl phthalate  (EXP,ISO)
dicrotophos  (ISO)
diethyl maleate  (ISO)
dioxygen  (ISO)
disodium selenite  (EXP,ISO)
diuron  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
elemental selenium  (EXP,ISO)
Enterolactone  (ISO)
entinostat  (ISO)
enzalutamide  (ISO)
ethanol  (EXP)
flutamide  (ISO)
furan  (ISO)
glucose  (ISO)
hydrogen peroxide  (ISO)
hydroquinone  (ISO)
indometacin  (ISO)
isoprenaline  (EXP)
lanthanum trichloride  (ISO)
lead diacetate  (ISO)
lead(0)  (ISO)
lipopolysaccharide  (EXP,ISO)
lycopene  (ISO)
medroxyprogesterone acetate  (ISO)
menadione  (ISO)
mercury atom  (ISO)
mercury dibromide  (ISO)
mercury(0)  (ISO)
metformin  (ISO)
methamphetamine  (ISO)
methidathion  (EXP)
methotrexate  (ISO)
methylmercury chloride  (ISO)
Muraglitazar  (ISO)
N,N-diethyl-m-toluamide  (ISO)
N-methyl-N'-nitro-N-nitrosoguanidine  (EXP)
N-nitrosodimethylamine  (ISO)
nickel atom  (ISO)
nitrofen  (ISO)
ochratoxin A  (ISO)
okadaic acid  (EXP)
ozone  (EXP,ISO)
panobinostat  (ISO)
paracetamol  (EXP,ISO)
perfluorohexanesulfonic acid  (EXP)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (EXP,ISO)
permethrin  (ISO)
phenobarbital  (ISO)
phenylmercury acetate  (ISO)
PhIP  (ISO)
phorbol 13-acetate 12-myristate  (EXP)
pirinixic acid  (EXP,ISO)
progesterone  (ISO)
propanal  (ISO)
Pyridostigmine bromide  (ISO)
resveratrol  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
SB 431542  (ISO)
Se-methyl-L-selenocysteine  (ISO)
Se-methylselenocysteine  (ISO)
selenium atom  (EXP,ISO)
silicon dioxide  (ISO)
silver atom  (EXP,ISO)
silver(0)  (EXP,ISO)
sodium arsenite  (EXP,ISO)
sodium dichromate  (ISO)
streptozocin  (EXP)
sulforaphane  (ISO)
tamoxifen  (EXP,ISO)
tert-butyl hydroperoxide  (ISO)
Tesaglitazar  (ISO)
testosterone  (ISO)
tetrachloromethane  (ISO)
thiram  (ISO)
titanium dioxide  (EXP)
tremolite asbestos  (EXP)
trichostatin A  (ISO)
triclosan  (ISO)
triphenyl phosphate  (ISO)
triptonide  (EXP)
valproic acid  (ISO)
vinclozolin  (ISO)
vorinostat  (ISO)
wortmannin  (ISO)
zinc atom  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Neurological dysfunction occurs in mice with targeted deletion of the selenoprotein P gene. Hill KE, etal., J Nutr 2004 Jan;134(1):157-61.
2. Expression of Selenoprotein Genes and Association with Selenium Status in Colorectal Adenoma and Colorectal Cancer. Hughes DJ, etal., Nutrients. 2018 Nov 21;10(11). pii: nu10111812. doi: 10.3390/nu10111812.
3. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
4. Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Ko MS, etal., Development 2000 Apr;127(8):1737-49.
5. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
6. MGDs mouse GO annotations MGD data from the GO Consortium
7. MGD IEA MGD IEA
8. Large-scale screen for genes controlling mammalian embryogenesis, using high-throughput gene expression analysis in mouse embryos. Neidhardt L, etal., Mech Dev 2000 Nov;98(1-2):77-94.
9. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
10. A subtractive gene expression screen suggests a role of transcription factor AP-2 alpha in control of proliferation and differentiation. Pfisterer P, etal., J Biol Chem 2002 Feb 22;277(8):6637-44. Epub 2001 Dec 10.
11. Mouse MP Annotation Import Pipeline RGD automated import pipeline
12. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
13. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
14. Selenium and Copper as Biomarkers for Pulmonary Arterial Hypertension in Systemic Sclerosis. Sun Q, etal., Nutrients. 2020 Jun 25;12(6):1894. doi: 10.3390/nu12061894.
15. Linkage mapping of 40 randomly isolated liver cDNA clones in the mouse. Warden CH, etal., Genomics 1993 Nov;18(2):295-307.
Additional References at PubMed
PMID:7716129   PMID:9288402   PMID:9687017   PMID:10333732   PMID:10349636   PMID:10775431   PMID:10922068   PMID:11042159   PMID:11076861   PMID:12477932   PMID:12521380   PMID:12574155  
PMID:14610273   PMID:14664694   PMID:15744015   PMID:15782199   PMID:15831471   PMID:16105800   PMID:16141072   PMID:16141073   PMID:16602821   PMID:16618389   PMID:17014962   PMID:17311913  
PMID:17311961   PMID:17314095   PMID:17553992   PMID:17937617   PMID:17961124   PMID:18172410   PMID:18174160   PMID:18287559   PMID:18424738   PMID:18956332   PMID:19136613   PMID:20370716  
PMID:20959537   PMID:21035759   PMID:21636077   PMID:21677750   PMID:21873635   PMID:22008794   PMID:22487427   PMID:22640876   PMID:22761431   PMID:23038251   PMID:23064117   PMID:23125459  
PMID:23651543   PMID:24257750   PMID:24274065   PMID:24434121   PMID:24519931   PMID:24532792   PMID:24599700   PMID:24626785   PMID:24760755   PMID:24952961   PMID:24989996   PMID:25068390  
PMID:26053663   PMID:26586820   PMID:27334433   PMID:27645994   PMID:27881738   PMID:28263310   PMID:29069514   PMID:29547524   PMID:29636330   PMID:32325033   PMID:33388316   PMID:33927588  
PMID:35120590   PMID:35140209   PMID:35318102   PMID:35354056   PMID:36947851   PMID:37166989   PMID:37857700   PMID:37984217  


Genomics

Comparative Map Data
Selenop
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39153,300,249 - 3,309,992 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl153,298,029 - 3,309,990 (+)EnsemblGRCm39 Ensembl
GRCm38153,270,767 - 3,280,510 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl153,268,547 - 3,280,508 (+)EnsemblGRCm38mm10GRCm38
MGSCv37153,220,767 - 3,230,508 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36153,220,996 - 3,230,508 (+)NCBIMGSCv36mm8
Celera153,135,278 - 3,145,023 (+)NCBICelera
Cytogenetic Map15A1NCBI
cM Map151.84NCBI
SELENOP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38542,799,880 - 42,811,892 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl542,799,880 - 42,887,392 (-)EnsemblGRCh38hg38GRCh38
GRCh37542,799,982 - 42,811,994 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36542,835,739 - 42,847,781 (-)NCBINCBI36Build 36hg18NCBI36
Build 34542,835,746 - 42,847,717NCBI
Celera542,689,516 - 42,701,558 (-)NCBICelera
Cytogenetic Map5p12NCBI
HuRef542,751,403 - 42,763,445 (-)NCBIHuRef
CHM1_1542,801,878 - 42,813,920 (-)NCBICHM1_1
T2T-CHM13v2.0543,052,823 - 43,064,836 (-)NCBIT2T-CHM13v2.0
Selenop
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8254,225,736 - 54,236,022 (+)NCBIGRCr8
mRatBN7.2252,498,123 - 52,508,409 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl252,498,339 - 52,508,852 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx259,598,067 - 59,608,378 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0257,656,824 - 57,667,108 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0252,686,704 - 52,697,013 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0253,105,912 - 53,116,198 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl253,109,684 - 53,114,858 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0272,138,104 - 72,148,390 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4252,451,883 - 52,462,263 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1252,380,331 - 52,390,794 (+)NCBI
Celera248,212,876 - 48,223,163 (+)NCBICelera
Cytogenetic Map2q16NCBI
Selenop
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495542626,951,003 - 26,961,839 (-)NCBIChiLan1.0ChiLan1.0
SELENOP
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2467,522,907 - 67,535,008 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1565,676,533 - 65,688,634 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0567,570,087 - 67,582,192 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1572,615,983 - 72,628,069 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl572,619,607 - 72,627,213 (+)Ensemblpanpan1.1panPan2
SELENOP
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1466,953,060 - 66,964,162 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl466,956,405 - 66,959,043 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha466,635,228 - 66,646,329 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0467,462,747 - 67,473,870 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl467,466,077 - 67,468,723 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1467,206,571 - 67,217,687 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0467,337,043 - 67,348,110 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0467,872,590 - 67,883,663 (+)NCBIUU_Cfam_GSD_1.0
Selenop
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213231,204,901 - 231,215,935 (-)NCBIHiC_Itri_2
SpeTri2.0NW_004936518155,905 - 166,932 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SELENOP
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1627,537,885 - 27,631,130 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11627,537,885 - 27,547,863 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21629,021,931 - 29,031,923 (-)NCBISscrofa10.2Sscrofa10.2susScr3
SELENOP
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1441,544,098 - 41,556,152 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366607131,987,207 - 31,999,405 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Selenop
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462475912,207,251 - 12,218,857 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Selenop
279 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:953
Count of miRNA genes:436
Interacting mature miRNAs:494
Transcripts:ENSMUST00000082424, ENSMUST00000159158, ENSMUST00000159216, ENSMUST00000159247, ENSMUST00000160311, ENSMUST00000160787, ENSMUST00000160930
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300594Eae2_msusceptibility to experimental allergic encephalomyelitis 2 (mouse)Not determined15131218736Mouse
1301136Pgia8_mproteoglycan induced arthritis 8 (mouse)Not determined15324016724388176Mouse
1357459Nhdlq7_mnon-HDL QTL 7 (mouse)Not determined15120489829Mouse
4141446Ffaq4_mfree fatty acid QTL 4 (mouse)Not determined127101390Mouse
1302121Cliff_mcliff drop aversion (mouse)Not determined15120489829Mouse
1300953Bdt5_mbone density traits 5 (mouse)Not determined15120489829Mouse
5491193Mobq4_mmultigenic obesity QTL 4 (mouse)Not determined15120489829Mouse
4141541Tglq3_mtriglyceride QTL 3 (mouse)Not determined15120489829Mouse
1301023Sluc24_msusceptibility to lung cancer 24 (mouse)Not determined15120489829Mouse
1301662Faq8_mfluctuating asymmetry QTL 8 (mouse)Not determined15120489829Mouse
11062069Bpq31_mblood pressure QTL 31 (mouse)15126273195Mouse

Markers in Region
RH136269  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38153,280,229 - 3,280,424UniSTSGRCm38
MGSCv37153,230,229 - 3,230,424UniSTSGRCm37
Celera153,144,744 - 3,144,939UniSTS
Cytogenetic Map15A1UniSTS
cM Map155.9UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001042613 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001042614 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_009155 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AA153204 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC166491 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF021345 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI892015 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK002450 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK077265 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK146774 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK148623 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK159269 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK159524 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK159894 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK159911 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK159935 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167611 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168463 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168583 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168631 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168747 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168926 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK169011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK169158 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK169362 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK183252 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK188386 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK190256 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK190911 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK192055 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK192611 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK193239 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK193304 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK193589 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK195443 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK196001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK199458 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK199796 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK200678 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK201439 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK201752 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK202422 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK203751 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC001991 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CB231357 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466581 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CK627189 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571944 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571945 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571946 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571947 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571948 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571949 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571950 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571951 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571952 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571953 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571954 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571955 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571956 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571957 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571958 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571959 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571960 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571961 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571962 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571963 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571964 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571965 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571966 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571967 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571968 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571969 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571970 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571971 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571972 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571973 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571974 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571975 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X99807 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000082424   ⟹   ENSMUSP00000081004
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl153,300,249 - 3,309,990 (+)Ensembl
GRCm38.p6 Ensembl153,270,767 - 3,280,508 (+)Ensembl
Ensembl Acc Id: ENSMUST00000159158   ⟹   ENSMUSP00000125632
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl153,300,293 - 3,305,217 (+)Ensembl
GRCm38.p6 Ensembl153,270,811 - 3,275,735 (+)Ensembl
Ensembl Acc Id: ENSMUST00000159216   ⟹   ENSMUSP00000124305
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl153,300,403 - 3,309,989 (+)Ensembl
GRCm38.p6 Ensembl153,270,921 - 3,280,507 (+)Ensembl
Ensembl Acc Id: ENSMUST00000159247
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl153,300,481 - 3,304,604 (+)Ensembl
GRCm38.p6 Ensembl153,270,999 - 3,275,122 (+)Ensembl
Ensembl Acc Id: ENSMUST00000160311   ⟹   ENSMUSP00000124580
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl153,300,480 - 3,305,146 (+)Ensembl
GRCm38.p6 Ensembl153,270,998 - 3,275,664 (+)Ensembl
Ensembl Acc Id: ENSMUST00000160787   ⟹   ENSMUSP00000124852
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl153,298,029 - 3,306,755 (+)Ensembl
GRCm38.p6 Ensembl153,268,547 - 3,277,273 (+)Ensembl
Ensembl Acc Id: ENSMUST00000160930   ⟹   ENSMUSP00000125505
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl153,301,567 - 3,306,753 (+)Ensembl
GRCm38.p6 Ensembl153,272,085 - 3,277,271 (+)Ensembl
RefSeq Acc Id: NM_001042613   ⟹   NP_001036078
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39153,300,249 - 3,309,992 (+)NCBI
GRCm38153,270,767 - 3,280,510 (+)NCBI
MGSCv37153,220,767 - 3,230,508 (+)RGD
Celera153,135,278 - 3,145,023 (+)RGD
cM Map15 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001042614   ⟹   NP_001036079
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39153,300,293 - 3,309,992 (+)NCBI
GRCm38153,270,811 - 3,280,510 (+)NCBI
MGSCv37153,220,767 - 3,230,508 (+)RGD
Celera153,135,278 - 3,145,023 (+)RGD
cM Map15 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_009155   ⟹   NP_033181
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39153,300,459 - 3,309,992 (+)NCBI
GRCm38153,270,977 - 3,280,510 (+)NCBI
MGSCv37153,220,767 - 3,230,508 (+)RGD
Celera153,135,278 - 3,145,023 (+)RGD
cM Map15 ENTREZGENE
Sequence:
Protein Sequences
Protein RefSeqs NP_001036078 (Get FASTA)   NCBI Sequence Viewer  
  NP_001036079 (Get FASTA)   NCBI Sequence Viewer  
  NP_033181 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAD01684 (Get FASTA)   NCBI Sequence Viewer  
  AAH01991 (Get FASTA)   NCBI Sequence Viewer  
  BAC55246 (Get FASTA)   NCBI Sequence Viewer  
  BAC55264 (Get FASTA)   NCBI Sequence Viewer  
  BAE27423 (Get FASTA)   NCBI Sequence Viewer  
  BAE28626 (Get FASTA)   NCBI Sequence Viewer  
  BAE34948 (Get FASTA)   NCBI Sequence Viewer  
  BAE35153 (Get FASTA)   NCBI Sequence Viewer  
  BAE35460 (Get FASTA)   NCBI Sequence Viewer  
  BAE35474 (Get FASTA)   NCBI Sequence Viewer  
  BAE35495 (Get FASTA)   NCBI Sequence Viewer  
  BAE39664 (Get FASTA)   NCBI Sequence Viewer  
  BAE40359 (Get FASTA)   NCBI Sequence Viewer  
  BAE40452 (Get FASTA)   NCBI Sequence Viewer  
  BAE40491 (Get FASTA)   NCBI Sequence Viewer  
  BAE40587 (Get FASTA)   NCBI Sequence Viewer  
  BAE40739 (Get FASTA)   NCBI Sequence Viewer  
  BAE40808 (Get FASTA)   NCBI Sequence Viewer  
  BAE40937 (Get FASTA)   NCBI Sequence Viewer  
  BAE41111 (Get FASTA)   NCBI Sequence Viewer  
  CAA68140 (Get FASTA)   NCBI Sequence Viewer  
  EDL03405 (Get FASTA)   NCBI Sequence Viewer  
  EDL03406 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000081004
  ENSMUSP00000081004.6
  ENSMUSP00000124305
  ENSMUSP00000124305.3
  ENSMUSP00000124580.3
  ENSMUSP00000124852.4
  ENSMUSP00000125505.3
  ENSMUSP00000125632.3
GenBank Protein P70274 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_001036078   ⟸   NM_001042613
- Peptide Label: precursor
- UniProtKB: Q9Z2T7 (UniProtKB/Swiss-Prot),   Q80UF3 (UniProtKB/Swiss-Prot),   Q80T08 (UniProtKB/Swiss-Prot),   Q6PKE7 (UniProtKB/Swiss-Prot),   Q3TXG8 (UniProtKB/Swiss-Prot),   Q3TJ31 (UniProtKB/Swiss-Prot),   P70274 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001036079   ⟸   NM_001042614
- Peptide Label: precursor
- UniProtKB: Q9Z2T7 (UniProtKB/Swiss-Prot),   Q80UF3 (UniProtKB/Swiss-Prot),   Q80T08 (UniProtKB/Swiss-Prot),   Q6PKE7 (UniProtKB/Swiss-Prot),   Q3TXG8 (UniProtKB/Swiss-Prot),   Q3TJ31 (UniProtKB/Swiss-Prot),   P70274 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_033181   ⟸   NM_009155
- Peptide Label: precursor
- UniProtKB: Q9Z2T7 (UniProtKB/Swiss-Prot),   Q80UF3 (UniProtKB/Swiss-Prot),   Q80T08 (UniProtKB/Swiss-Prot),   Q6PKE7 (UniProtKB/Swiss-Prot),   Q3TXG8 (UniProtKB/Swiss-Prot),   Q3TJ31 (UniProtKB/Swiss-Prot),   P70274 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSMUSP00000124305   ⟸   ENSMUST00000159216
Ensembl Acc Id: ENSMUSP00000125632   ⟸   ENSMUST00000159158
Ensembl Acc Id: ENSMUSP00000124580   ⟸   ENSMUST00000160311
Ensembl Acc Id: ENSMUSP00000125505   ⟸   ENSMUST00000160930
Ensembl Acc Id: ENSMUSP00000124852   ⟸   ENSMUST00000160787
Ensembl Acc Id: ENSMUSP00000081004   ⟸   ENSMUST00000082424
Protein Domains
Selenoprotein P N-terminal

Promoters
RGD ID:6826461
Promoter ID:MM_KWN:17904
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_001042613,   NM_001042614,   NM_009155
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36153,219,976 - 3,221,057 (+)MPROMDB
RGD ID:6847258
Promoter ID:MM_ACW:17258
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_4Hour
Transcripts:SEPP1.FSEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36153,221,281 - 3,221,781 (+)MPROMDB
RGD ID:6849048
Promoter ID:MM_XEF:2403
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Liver
Transcripts:NM_001031609,   NM_001085486,   NM_001093726,   NM_001115115,   NM_001115118,   NM_001133990,   NM_001134823,   NM_001135605,   NM_001159490,   NM_005410,   NM_019192,   NM_174459
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36153,224,711 - 3,225,211 (+)MPROMDB
RGD ID:6847286
Promoter ID:MM_ACW:17259
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney,   Liver,   Lung
Transcripts:RUNUMA.ASEP07-UNSPLICED,   SEPP1.ESEP07,   SEPP1.GSEP07-UNSPLICED
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36153,229,281 - 3,230,387 (+)MPROMDB
RGD ID:8683300
Promoter ID:EPDNEW_M19680
Type:initiation region
Name:Selenop_1
Description:Mus musculus selenoprotein P , transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38153,270,996 - 3,271,056EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:894288 AgrOrtholog
Ensembl Genes ENSMUSG00000064373 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000082424 ENTREZGENE
  ENSMUST00000082424.12 UniProtKB/Swiss-Prot
  ENSMUST00000159158.9 UniProtKB/TrEMBL
  ENSMUST00000159216 ENTREZGENE
  ENSMUST00000159216.10 UniProtKB/Swiss-Prot
  ENSMUST00000160311.3 UniProtKB/TrEMBL
  ENSMUST00000160787.10 UniProtKB/TrEMBL
  ENSMUST00000160930.3 UniProtKB/TrEMBL
InterPro Selenoprotein-P_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SelP_C UniProtKB/Swiss-Prot
  SeP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:20363 UniProtKB/Swiss-Prot
MGD MGI:894288 ENTREZGENE
NCBI Gene Selenop ENTREZGENE
PANTHER PTHR10105 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SELENOPROTEIN P UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam SelP_C UniProtKB/Swiss-Prot
  SelP_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Selenop PhenoGen
UniProt E0CX80_MOUSE UniProtKB/TrEMBL
  E0CY03_MOUSE UniProtKB/TrEMBL
  E0CZ76_MOUSE UniProtKB/TrEMBL
  P70274 ENTREZGENE
  Q3TJ31 ENTREZGENE
  Q3TXG8 ENTREZGENE
  Q6PKE7 ENTREZGENE
  Q80T08 ENTREZGENE
  Q80UF3 ENTREZGENE
  Q9Z2T7 ENTREZGENE
  SEPP1_MOUSE UniProtKB/Swiss-Prot
UniProt Secondary E0CZC5 UniProtKB/TrEMBL
  Q3TJ31 UniProtKB/Swiss-Prot
  Q3TXG8 UniProtKB/Swiss-Prot
  Q6PKE7 UniProtKB/Swiss-Prot
  Q80T08 UniProtKB/Swiss-Prot
  Q80UF3 UniProtKB/Swiss-Prot
  Q9Z2T7 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2024-08-21 Selenop  selenoprotein P  D15Ucla1  DNA segment, Chr 15, University of California at Los Angeles 1  Symbol and/or name change 5135510 APPROVED
2024-08-21 D15Ucla1  DNA segment, Chr 15, University of California at Los Angeles 1  Selenop  selenoprotein P  Symbol and/or name change 5135510 APPROVED
2016-10-25 Selenop  selenoprotein P  Sepp1  selenoprotein P, plasma, 1  Symbol and/or name change 5135510 APPROVED