Wdr37 (WD repeat domain 37) - Rat Genome Database

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Gene: Wdr37 (WD repeat domain 37) Mus musculus
Analyze
Symbol: Wdr37
Name: WD repeat domain 37
RGD ID: 1314667
MGI Page MGI
Description: Involved in lymphocyte homeostasis. Acts upstream of or within corpus callosum development. Predicted to be located in cytoplasm and nucleus. Is expressed in nervous system and neural retina. Human ortholog(s) of this gene implicated in neurooculocardiogenitourinary syndrome. Orthologous to human WDR37 (WD repeat domain 37).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 4933417A01Rik; 6430603N07; AI481191; mKIAA0982; WD repeat-containing protein 37
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39138,853,002 - 8,922,136 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl138,853,004 - 8,921,945 (-)EnsemblGRCm39 Ensembl
GRCm38138,802,966 - 8,872,100 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl138,802,968 - 8,871,909 (-)EnsemblGRCm38mm10GRCm38
MGSCv37138,802,214 - 8,870,976 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36138,802,214 - 8,870,976 (-)NCBIMGSCv36mm8
Celera138,747,168 - 8,815,705 (-)NCBICelera
Cytogenetic Map13A1NCBI
cM Map133.6NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


1 to 11 of 11 rows
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Wdr37Mouseamenorrhea  ISOWDR37 (Homo sapiens)8554872ClinVar Annotator: match by term: Primary amenorrheaClinVarPMID:21681106
Wdr37Mousecerebellar hypoplasia  ISOWDR37 (Homo sapiens)8554872ClinVar Annotator: match by term: Congenital cerebellar hypoplasiaClinVarPMID:25741868 more ...
Wdr37Mousecoloboma  ISOWDR37 (Homo sapiens)8554872ClinVar Annotator: match by term: ColobomaClinVarPMID:25741868 more ...
Wdr37MouseDevelopmental Disabilities  ISOWDR37 (Homo sapiens)8554872ClinVar Annotator: match by term: Global developmental delayClinVarPMID:25741868 more ...
Wdr37MouseDevelopmental Disabilities  ISOWDR37 (Homo sapiens)8554872ClinVar Annotator: match by term: Developmental delayClinVarPMID:25741868 more ...
Wdr37Mouseepilepsy  ISOWDR37 (Homo sapiens)8554872ClinVar Annotator: match by term: EpilepsyClinVarPMID:25741868 more ...
Wdr37Mousegenetic disease  ISOWDR37 (Homo sapiens)8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:25741868 more ...
Wdr37Mousehydrocephalus  ISOWDR37 (Homo sapiens)8554872ClinVar Annotator: match by term: VentriculomegalyClinVarPMID:25741868 more ...
Wdr37Mouseintellectual disability  ISOWDR37 (Homo sapiens)8554872ClinVar Annotator: match by term: intellectual disabilitiesClinVarPMID:25741868 more ...
Wdr37Mouseneurooculocardiogenitourinary syndrome  ISOWDR37 (Homo sapiens)8554872ClinVar more ...ClinVarPMID:25741868 more ...
Wdr37MouseVentriculomegaly  ISOWDR37 (Homo sapiens)8554872ClinVar Annotator: match by term: VentriculomegalyClinVarPMID:25741868 more ...
1 to 11 of 11 rows
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Wdr37Mouseneurooculocardiogenitourinary syndrome  ISOWDR37 (Homo sapiens)7240710 OMIM 

1 to 20 of 59 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Wdr37Mouse(1->4)-beta-D-glucan multiple interactionsEXP 6480464[perfluorooctane sulfonic acid co-treated with Cellulose] results in decreased expression of WDR37 mRNACTDPMID:36331819
Wdr37Mouse1,2-dichloroethane decreases expressionEXP 6480464ethylene dichloride results in decreased expression of WDR37 mRNACTDPMID:28960355
Wdr37Mouse1,2-dimethylhydrazine decreases expressionEXP 64804641 and 2-Dimethylhydrazine results in decreased expression of WDR37 mRNACTDPMID:22206623
Wdr37Mouse17alpha-ethynylestradiol multiple interactionsEXP 6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of WDR37 mRNACTDPMID:17942748
Wdr37Mouse17beta-estradiol increases expressionEXP 6480464Estradiol results in increased expression of WDR37 mRNACTDPMID:39298647
Wdr37Mouse2,3,7,8-tetrachlorodibenzodioxine multiple interactionsEXP 6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of WDR37 mRNA and Tetrachlorodibenzodioxin promotes the reaction [AHR protein binds to WDR37 promoter]CTDPMID:17942748 and PMID:19654925
Wdr37Mouse2,3,7,8-tetrachlorodibenzodioxine decreases expressionISOWdr37 (Rattus norvegicus)6480464Tetrachlorodibenzodioxin results in decreased expression of WDR37 mRNACTDPMID:33387578
Wdr37Mouse2,3,7,8-tetrachlorodibenzodioxine affects expressionISOWDR37 (Homo sapiens)6480464Tetrachlorodibenzodioxin affects the expression of WDR37 mRNACTDPMID:22574217
Wdr37Mouse2,3,7,8-tetrachlorodibenzodioxine affects expressionEXP 6480464Tetrachlorodibenzodioxin affects the expression of WDR37 mRNACTDPMID:21570461
Wdr37Mouse4,4'-sulfonyldiphenol increases expressionEXP 6480464bisphenol S results in increased expression of WDR37 mRNACTDPMID:39298647
Wdr37Mouseaconitine increases expressionISOWdr37 (Rattus norvegicus)6480464Aconitine results in increased expression of WDR37 proteinCTDPMID:33236894
Wdr37Mouseacrolein multiple interactionsISOWDR37 (Homo sapiens)6480464[Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone] affects the expression of WDR37 mRNA more ...CTDPMID:32699268 and PMID:32845096
Wdr37Mouseacrylamide decreases expressionISOWdr37 (Rattus norvegicus)6480464Acrylamide results in decreased expression of WDR37 mRNACTDPMID:28959563
Wdr37Mouseaflatoxin B1 increases expressionEXP 6480464Aflatoxin B1 results in increased expression of WDR37 mRNACTDPMID:19770486
Wdr37Mouseaflatoxin B1 affects methylationISOWDR37 (Homo sapiens)6480464Aflatoxin B1 affects the methylation of WDR37 intronCTDPMID:30157460
Wdr37Mouseaflatoxin B1 decreases methylationISOWDR37 (Homo sapiens)6480464Aflatoxin B1 results in decreased methylation of WDR37 exon and Aflatoxin B1 results in decreased methylation of WDR37 geneCTDPMID:27153756 and PMID:30157460
Wdr37MouseAflatoxin B2 alpha affects methylationISOWDR37 (Homo sapiens)6480464aflatoxin B2 affects the methylation of WDR37 intronCTDPMID:30157460
Wdr37Mouseall-trans-retinoic acid increases expressionISOWDR37 (Homo sapiens)6480464Tretinoin results in increased expression of WDR37 mRNACTDPMID:33167477
Wdr37Mousealpha-pinene multiple interactionsISOWDR37 (Homo sapiens)6480464[Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone] affects the expression of WDR37 mRNA and [Air Pollutants results in increased abundance of [Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone]] which affects the expression of WDR37 mRNACTDPMID:32699268
Wdr37Mouseamitrole decreases expressionISOWdr37 (Rattus norvegicus)6480464Amitrole results in decreased expression of WDR37 mRNACTDPMID:38685447

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Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Wdr37Mousecorpus callosum development acts_upstream_of_or_withinIMPMGI:44526512290270 PMID:29078390MGIPMID:29078390
Wdr37Mouselymphocyte homeostasis involved_inIMP 2290270 PMID:33630350UniProtPMID:33630350

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Wdr37Mousecytoplasm located_inISSUniProtKB:Q9Y2I82290270 UniProtGO_REF:0000024
Wdr37Mousecytoplasm located_inISOUniProtKB:Q9Y2I82290270 GO_CentralGO_REF:0000119
Wdr37Mousenucleus located_inISOUniProtKB:Q9Y2I82290270 GO_CentralGO_REF:0000119
Wdr37Mousenucleus located_inISSUniProtKB:Q9Y2I82290270 UniProtGO_REF:0000024

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Wdr37Mousemolecular_function enablesND 2290270 MGIGO_REF:0000015
Wdr37Mouseprotein binding enablesIPIUniProtKB:Q8K2122290270 PMID:33630350UniProtPMID:33630350

1 to 11 of 11 rows
1 to 11 of 11 rows

#
Reference Title
Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
3. Prediction of the coding sequences of mouse homologues of KIAA gene: III. the complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries. Okazaki N, etal., DNA Res 2003 Aug 31;10(4):167-80.
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. Mouse MP Annotation Import Pipeline RGD automated import pipeline
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
7. Database resources of the National Center for Biotechnology Information. Wheeler DL, etal., Nucleic Acids Res 2001 Jan 1;29(1):11-6.
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:12477932   PMID:12904583   PMID:14610273   PMID:15489334   PMID:16107646   PMID:16141072   PMID:16141073   PMID:16512683  
PMID:16602821   PMID:16944949   PMID:16959763   PMID:18799693   PMID:21267068   PMID:21677750   PMID:21873635   PMID:24721909   PMID:26073538   PMID:27746211   PMID:29078390   PMID:30068389  
PMID:30196744   PMID:30562941   PMID:30973865   PMID:33601422   PMID:33630350   PMID:37142655   PMID:38355793  



Wdr37
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39138,853,002 - 8,922,136 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl138,853,004 - 8,921,945 (-)EnsemblGRCm39 Ensembl
GRCm38138,802,966 - 8,872,100 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl138,802,968 - 8,871,909 (-)EnsemblGRCm38mm10GRCm38
MGSCv37138,802,214 - 8,870,976 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36138,802,214 - 8,870,976 (-)NCBIMGSCv36mm8
Celera138,747,168 - 8,815,705 (-)NCBICelera
Cytogenetic Map13A1NCBI
cM Map133.6NCBI
WDR37
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38101,056,385 - 1,132,372 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl101,049,538 - 1,160,991 (+)EnsemblGRCh38hg38GRCh38
GRCh37101,102,325 - 1,178,312 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36101,092,776 - 1,168,237 (+)NCBINCBI36Build 36hg18NCBI36
Build 34101,092,797 - 1,168,106NCBI
Celera101,052,188 - 1,127,352 (+)NCBICelera
Cytogenetic Map10p15.3NCBI
HuRef101,041,318 - 1,116,635 (+)NCBIHuRef
CHM1_1101,100,893 - 1,178,215 (+)NCBICHM1_1
T2T-CHM13v2.0101,053,000 - 1,128,899 (+)NCBIT2T-CHM13v2.0
Wdr37
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81766,547,425 - 66,613,841 (+)NCBIGRCr8
mRatBN7.21761,637,258 - 61,703,677 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1761,637,258 - 61,703,677 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1765,158,099 - 65,224,530 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01768,986,907 - 69,053,338 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01763,008,499 - 63,074,885 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01757,983,937 - 58,051,011 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1757,983,937 - 58,050,992 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01759,789,206 - 59,855,683 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41772,563,069 - 72,628,890 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11772,587,300 - 72,641,807 (+)NCBI
Celera1754,421,462 - 54,487,842 (+)NCBICelera
Cytogenetic Map17q12.1NCBI
Wdr37
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542130,068,306 - 30,161,762 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542130,097,046 - 30,161,762 (-)NCBIChiLan1.0ChiLan1.0
WDR37
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2813,582,276 - 13,665,002 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11013,587,145 - 13,670,319 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0101,093,957 - 1,172,209 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1101,140,167 - 1,217,263 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl101,140,562 - 1,217,263 (+)Ensemblpanpan1.1panPan2
WDR37
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1233,865,534 - 33,912,119 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl233,682,418 - 33,923,843 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha230,901,963 - 30,959,758 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0234,251,049 - 34,308,914 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl234,229,563 - 34,308,978 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1231,334,373 - 31,392,159 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0232,174,113 - 32,232,212 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0232,921,419 - 32,979,607 (-)NCBIUU_Cfam_GSD_1.0
Wdr37
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934436,783,577 - 36,853,643 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648412,948,358 - 13,018,631 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648412,948,803 - 13,020,555 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
WDR37
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1068,427,192 - 68,535,143 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11068,416,058 - 68,529,662 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21075,322,822 - 75,361,681 (-)NCBISscrofa10.2Sscrofa10.2susScr3
WDR37
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.191,011,478 - 1,085,569 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl91,011,726 - 1,082,773 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660516,065,581 - 6,142,557 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Wdr37
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247759,768,397 - 9,857,837 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247759,768,568 - 9,858,085 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in Wdr37
1776 total Variants

Predicted Target Of
Summary Value
Count of predictions:3705
Count of miRNA genes:931
Interacting mature miRNAs:1287
Transcripts:ENSMUST00000021572, ENSMUST00000054251, ENSMUST00000164183, ENSMUST00000175687, ENSMUST00000175958, ENSMUST00000176098, ENSMUST00000176329, ENSMUST00000176429, ENSMUST00000176587, ENSMUST00000176715, ENSMUST00000176813, ENSMUST00000176922, ENSMUST00000177112, ENSMUST00000177404, ENSMUST00000177409, ENSMUST00000177537
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 13 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
10045625Heal23_mwound healing/regeneration 23 (mouse)Not determined13347761237477820Mouse
10045624Heal24_mwound healing/regeneration (mouse)Not determined13347761237477820Mouse
1301367Twq1_mtestis weight QTL 1 (mouse)Not determined13361551237615672Mouse
1558898Hpi1_mhapatic PMN infiltration 1 (mouse)Not determined13441402553101640Mouse
10449140Eosn2_meosinophil differential 2 (mouse)1322131134221311Mouse
1301661Tshp13_mtooth shape 13 (mouse)Not determined13123454672Mouse
15039338Nmrs34_mNAFLD-associated magnetic resonance shift 34 (mouse)1322131134221311Mouse
1301890Adip7_madiposity 7 (mouse)Not determined13123454672Mouse
26884393Humsd7_mhumerus midshaft diameter 7, 16 week (mouse)13395000076048119Mouse
1301255Cd4ts6_mCD4 T cell subset 6 (mouse)Not determined1316854534168684Mouse

1 to 10 of 13 rows
AU017194  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38138,832,029 - 8,832,168UniSTSGRCm38
MGSCv37138,831,275 - 8,831,414UniSTSGRCm37
Celera138,776,112 - 8,776,251UniSTS
Cytogenetic Map13A1UniSTS
Whitehead/MRC_RH13131.87UniSTS
BE200136  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38138,850,517 - 8,850,599UniSTSGRCm38
MGSCv37138,849,763 - 8,849,845UniSTSGRCm37
Celera138,794,599 - 8,794,681UniSTS
Cytogenetic Map13A1UniSTS
Whitehead/MRC_RH13138.92UniSTS
RH132961  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38138,803,024 - 8,803,198UniSTSGRCm38
MGSCv37138,802,270 - 8,802,444UniSTSGRCm37
Celera138,747,224 - 8,747,398UniSTS
Cytogenetic Map13A1UniSTS
AI481191  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38138,803,236 - 8,803,333UniSTSGRCm38
MGSCv37138,802,482 - 8,802,579UniSTSGRCm37
Celera138,747,436 - 8,747,533UniSTS
Cytogenetic Map13A1UniSTS
Whitehead/MRC_RH13146.1UniSTS






1 to 26 of 26 rows
RefSeq Transcripts NM_001039388 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001039389 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_172445 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006516469 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006516470 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006516471 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036157955 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003950440 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_382013 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC124732 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC126548 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC132433 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK014128 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK016837 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK032582 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK036203 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK044740 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK129254 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK146209 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB611667 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC046236 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC046562 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC048819 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY122174 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466588 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ134699 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 26 of 26 rows

Ensembl Acc Id: ENSMUST00000021572   ⟹   ENSMUSP00000021572
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl138,853,031 - 8,921,080 (-)Ensembl
GRCm38.p6 Ensembl138,802,995 - 8,871,044 (-)Ensembl
Ensembl Acc Id: ENSMUST00000054251   ⟹   ENSMUSP00000062174
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl138,853,004 - 8,921,766 (-)Ensembl
GRCm38.p6 Ensembl138,802,968 - 8,871,730 (-)Ensembl
Ensembl Acc Id: ENSMUST00000164183   ⟹   ENSMUSP00000131469
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl138,902,705 - 8,921,015 (-)Ensembl
GRCm38.p6 Ensembl138,852,669 - 8,870,979 (-)Ensembl
Ensembl Acc Id: ENSMUST00000175687
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl138,903,709 - 8,908,811 (-)Ensembl
GRCm38.p6 Ensembl138,853,673 - 8,858,775 (-)Ensembl
Ensembl Acc Id: ENSMUST00000175958   ⟹   ENSMUSP00000135182
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl138,906,954 - 8,921,945 (-)Ensembl
GRCm38.p6 Ensembl138,856,918 - 8,871,909 (-)Ensembl
Ensembl Acc Id: ENSMUST00000176098   ⟹   ENSMUSP00000135094
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl138,869,899 - 8,899,594 (-)Ensembl
GRCm38.p6 Ensembl138,819,863 - 8,849,558 (-)Ensembl
Ensembl Acc Id: ENSMUST00000176329   ⟹   ENSMUSP00000135101
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl138,892,800 - 8,908,798 (-)Ensembl
GRCm38.p6 Ensembl138,842,764 - 8,858,762 (-)Ensembl
Ensembl Acc Id: ENSMUST00000176429   ⟹   ENSMUSP00000134916
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl138,869,957 - 8,903,743 (-)Ensembl
GRCm38.p6 Ensembl138,819,921 - 8,853,707 (-)Ensembl
Ensembl Acc Id: ENSMUST00000176587   ⟹   ENSMUSP00000135271
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl138,902,708 - 8,911,258 (-)Ensembl
GRCm38.p6 Ensembl138,852,672 - 8,861,222 (-)Ensembl
Ensembl Acc Id: ENSMUST00000176715   ⟹   ENSMUSP00000134987
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl138,899,579 - 8,911,261 (-)Ensembl
GRCm38.p6 Ensembl138,849,543 - 8,861,225 (-)Ensembl
Ensembl Acc Id: ENSMUST00000176813   ⟹   ENSMUSP00000135097
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl138,897,716 - 8,921,772 (-)Ensembl
GRCm38.p6 Ensembl138,847,680 - 8,871,736 (-)Ensembl
Ensembl Acc Id: ENSMUST00000176922   ⟹   ENSMUSP00000135742
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl138,900,516 - 8,921,059 (-)Ensembl
GRCm38.p6 Ensembl138,850,480 - 8,871,023 (-)Ensembl
Ensembl Acc Id: ENSMUST00000177112
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl138,903,361 - 8,921,030 (-)Ensembl
GRCm38.p6 Ensembl138,853,325 - 8,870,994 (-)Ensembl
Ensembl Acc Id: ENSMUST00000177404   ⟹   ENSMUSP00000135785
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl138,911,172 - 8,921,043 (-)Ensembl
GRCm38.p6 Ensembl138,861,136 - 8,871,007 (-)Ensembl
Ensembl Acc Id: ENSMUST00000177409
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl138,885,425 - 8,887,270 (-)Ensembl
GRCm38.p6 Ensembl138,835,389 - 8,837,234 (-)Ensembl
Ensembl Acc Id: ENSMUST00000177537   ⟹   ENSMUSP00000135577
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl138,855,851 - 8,897,673 (-)Ensembl
GRCm38.p6 Ensembl138,805,815 - 8,847,637 (-)Ensembl
Ensembl Acc Id: ENSMUST00000221401
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl138,894,490 - 8,896,741 (-)Ensembl
GRCm38.p6 Ensembl138,844,454 - 8,846,705 (-)Ensembl
RefSeq Acc Id: NM_001039388   ⟹   NP_001034477
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39138,853,002 - 8,921,772 (-)NCBI
GRCm38138,802,966 - 8,871,736 (-)NCBI
MGSCv37138,802,214 - 8,870,976 (-)RGD
Celera138,747,166 - 8,815,711 (-)NCBI
cM Map13 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001039389   ⟹   NP_001034478
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39138,900,515 - 8,921,080 (-)NCBI
GRCm38138,850,479 - 8,871,044 (-)NCBI
MGSCv37138,802,214 - 8,870,976 (-)RGD
Celera138,747,166 - 8,815,711 (-)NCBI
cM Map13 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_172445   ⟹   NP_766033
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39138,853,002 - 8,921,080 (-)NCBI
GRCm38138,802,966 - 8,871,044 (-)NCBI
MGSCv37138,802,214 - 8,870,976 (-)RGD
Celera138,747,166 - 8,815,711 (-)NCBI
cM Map13 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006516469   ⟹   XP_006516532
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39138,853,030 - 8,921,097 (-)NCBI
GRCm38138,802,994 - 8,871,066 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006516470   ⟹   XP_006516533
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39138,853,030 - 8,922,136 (-)NCBI
GRCm38138,802,994 - 8,872,100 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006516471   ⟹   XP_006516534
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39138,853,030 - 8,910,015 (-)NCBI
GRCm38138,802,994 - 8,859,988 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036157955   ⟹   XP_036013848
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39138,853,030 - 8,921,772 (-)NCBI
Sequence:
RefSeq Acc Id: XR_003950440
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39138,853,030 - 8,921,118 (-)NCBI
GRCm38138,802,995 - 8,871,067 (-)NCBI
Sequence:
RefSeq Acc Id: XR_382013
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39138,853,030 - 8,921,118 (-)NCBI
GRCm38138,802,995 - 8,871,066 (-)NCBI
Sequence:
1 to 5 of 20 rows
1 to 5 of 20 rows
RefSeq Acc Id: NP_001034477   ⟸   NM_001039388
- Peptide Label: isoform a
- UniProtKB: Q8CCL2 (UniProtKB/Swiss-Prot),   Q8CBE3 (UniProtKB/Swiss-Prot),   Q80Y96 (UniProtKB/Swiss-Prot),   Q3UK24 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_766033   ⟸   NM_172445
- Peptide Label: isoform a
- UniProtKB: Q8CCL2 (UniProtKB/Swiss-Prot),   Q8CBE3 (UniProtKB/Swiss-Prot),   Q80Y96 (UniProtKB/Swiss-Prot),   Q3UK24 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001034478   ⟸   NM_001039389
- Peptide Label: isoform b
- UniProtKB: Q05BF4 (UniProtKB/TrEMBL),   Q8C8P3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006516533   ⟸   XM_006516470
- Peptide Label: isoform X1
- UniProtKB: Q8CCL2 (UniProtKB/Swiss-Prot),   Q8CBE3 (UniProtKB/Swiss-Prot),   Q80Y96 (UniProtKB/Swiss-Prot),   Q3UK24 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006516532   ⟸   XM_006516469
- Peptide Label: isoform X1
- UniProtKB: Q8CCL2 (UniProtKB/Swiss-Prot),   Q8CBE3 (UniProtKB/Swiss-Prot),   Q80Y96 (UniProtKB/Swiss-Prot),   Q3UK24 (UniProtKB/TrEMBL)
- Sequence:

Name Modeler Protein Id AA Range Protein Structure
AF-Q8CBE3-F1-model_v2 AlphaFold Q8CBE3 1-496 view protein structure

RGD ID:6823645
Promoter ID:MM_KWN:13189
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day2,   3T3L1_Day6,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Lung,   MEF_B6
Transcripts:UC007PKM.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36138,870,191 - 8,871,182 (+)MPROMDB
RGD ID:6824482
Promoter ID:MM_KWN:13190
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   Brain,   ES_Cell,   Kidney,   Liver,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_001039388,   NM_001039389,   NM_172445,   UC007PKK.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36138,870,316 - 8,870,947 (-)MPROMDB
RGD ID:8679546
Promoter ID:EPDNEW_M17804
Type:single initiation site
Name:Wdr37_3
Description:Mus musculus WD repeat domain 37 , transcript variant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M17805  EPDNEW_M17806  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38138,870,729 - 8,870,789EPDNEW
RGD ID:8679548
Promoter ID:EPDNEW_M17805
Type:initiation region
Name:Wdr37_1
Description:Mus musculus WD repeat domain 37 , transcript variant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M17804  EPDNEW_M17806  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38138,871,013 - 8,871,073EPDNEW
RGD ID:8679550
Promoter ID:EPDNEW_M17806
Type:initiation region
Name:Wdr37_2
Description:Mus musculus WD repeat domain 37 , transcript variant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M17804  EPDNEW_M17805  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38138,871,716 - 8,871,776EPDNEW


1 to 40 of 43 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000021147 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000021572 ENTREZGENE
  ENSMUST00000021572.11 UniProtKB/Swiss-Prot
  ENSMUST00000054251 ENTREZGENE
  ENSMUST00000054251.13 UniProtKB/Swiss-Prot
  ENSMUST00000176922 ENTREZGENE
Gene3D-CATH 2.130.10.10 UniProtKB/Swiss-Prot
InterPro G-protein_beta_WD-40_rep UniProtKB/Swiss-Prot
  WD40/YVTN_repeat-like_dom_sf UniProtKB/Swiss-Prot
  WD40_repeat UniProtKB/Swiss-Prot
  WD40_repeat_CS UniProtKB/Swiss-Prot
  WD40_repeat_dom_sf UniProtKB/Swiss-Prot
KEGG Report mmu:207615 UniProtKB/Swiss-Prot
MGD MGI:1920393 ENTREZGENE
NCBI Gene Wdr37 ENTREZGENE
PANTHER WD REPEAT-CONTAINING PROTEIN 37 UniProtKB/Swiss-Prot
  WD40 REPEAT PROTEIN 12, 37 UniProtKB/Swiss-Prot
Pfam WD40 UniProtKB/Swiss-Prot
PhenoGen Wdr37 PhenoGen
PRINTS GPROTEINBRPT UniProtKB/Swiss-Prot
PROSITE WD_REPEATS_1 UniProtKB/Swiss-Prot
  WD_REPEATS_2 UniProtKB/Swiss-Prot
  WD_REPEATS_REGION UniProtKB/Swiss-Prot
SMART WD40 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF50978 UniProtKB/Swiss-Prot
UniProt H3BJB3_MOUSE UniProtKB/TrEMBL
  H3BJH4_MOUSE UniProtKB/TrEMBL
  H3BJR4_MOUSE UniProtKB/TrEMBL
  H3BJR7_MOUSE UniProtKB/TrEMBL
  H3BJS1_MOUSE UniProtKB/TrEMBL
  H3BJZ0_MOUSE UniProtKB/TrEMBL
  H3BK66_MOUSE UniProtKB/TrEMBL
  H3BKY3_MOUSE UniProtKB/TrEMBL
  H3BLH1_MOUSE UniProtKB/TrEMBL
  Q05BF4 ENTREZGENE, UniProtKB/TrEMBL
  Q3UK24 ENTREZGENE, UniProtKB/TrEMBL
  Q80Y96 ENTREZGENE
  Q8C8P3 ENTREZGENE, UniProtKB/TrEMBL
  Q8CBE3 ENTREZGENE
  Q8CCL2 ENTREZGENE
1 to 40 of 43 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2024-08-26 Wdr37  WD repeat domain 37  3110035P10Rik  RIKEN cDNA 3110035P10 gene  Symbol and/or name updated 27372883 PROVISIONAL
2024-08-21 3110035P10Rik  RIKEN cDNA 3110035P10 gene  Wdr37  WD repeat domain 37  Symbol and/or name change 5135510 APPROVED