Anxa3 (annexin A3) - Rat Genome Database

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Advanced Search (OLGA)
Gene: Anxa3 (annexin A3) Mus musculus
Analyze
Symbol: Anxa3
Name: annexin A3
RGD ID: 731665
MGI Page MGI
Description: Predicted to enable calcium-dependent phospholipid binding activity; phosphatidylserine binding activity; and phospholipase A2 inhibitor activity. Predicted to be involved in several processes, including neutrophil degranulation; positive regulation of angiogenesis; and regulation of nucleobase-containing compound metabolic process. Located in collagen-containing extracellular matrix. Is expressed in several structures, including Meckel's cartilage; brain meninges; cardiovascular system; hindlimb interdigital region; and rectum. Orthologous to human ANXA3 (annexin A3).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 35-alpha calcimedin; An; annexin III; annexin-3; Anx3; lipocortin III; PAP-III; placental anticoagulant protein III
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39596,941,257 - 96,993,825 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl596,941,198 - 96,993,825 (+)EnsemblGRCm39 Ensembl
GRCm38596,793,385 - 96,845,968 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl596,793,339 - 96,845,966 (+)EnsemblGRCm38mm10GRCm38
MGSCv37597,222,404 - 97,274,987 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36597,033,717 - 97,086,270 (+)NCBIMGSCv36mm8
Celera594,124,314 - 94,176,695 (+)NCBICelera
Cytogenetic Map5E3NCBI
cM Map547.29NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,1-dichloroethene  (EXP)
1,2-dimethylhydrazine  (EXP,ISO)
1-chloro-2,4-dinitrobenzene  (ISO)
1-naphthyl isothiocyanate  (ISO)
17alpha-ethynylestradiol  (EXP,ISO)
17beta-estradiol  (EXP,ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,2,2-tetramine  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (EXP,ISO)
2,4-dinitrotoluene  (ISO)
2,6-dimethoxyphenol  (ISO)
2-acetamidofluorene  (EXP,ISO)
2-hydroxypropanoic acid  (ISO)
2-methoxyethanol  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (EXP,ISO)
3H-1,2-dithiole-3-thione  (ISO)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (EXP,ISO)
4-hydroxyphenyl retinamide  (EXP)
5-fluorouracil  (ISO)
acetamide  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (EXP,ISO)
alpha-Zearalanol  (ISO)
ammonium chloride  (ISO)
aniline  (ISO)
Aroclor 1254  (EXP)
arsane  (ISO)
arsenic atom  (ISO)
arsenous acid  (ISO)
asbestos  (ISO)
benzene  (EXP)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
Benzo[k]fluoranthene  (EXP)
beta-lapachone  (ISO)
bexarotene  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP)
bleomycin A2  (ISO)
Brodifacoum  (ISO)
buspirone  (ISO)
butanal  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
calcitriol  (ISO)
carbamazepine  (ISO)
carbon nanotube  (EXP)
carbonyl sulfide  (ISO)
CGP 52608  (ISO)
chloropicrin  (ISO)
choline  (EXP)
cisplatin  (ISO)
cobalt dichloride  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
coumestrol  (ISO)
crocidolite asbestos  (EXP)
Cuprizon  (ISO)
cyclosporin A  (ISO)
desferrioxamine B  (ISO)
dexamethasone  (EXP,ISO)
diarsenic trioxide  (ISO)
diazinon  (ISO)
Dibutyl phosphate  (ISO)
dibutyl phthalate  (EXP,ISO)
dichlorine  (ISO)
diethyl maleate  (ISO)
diethylstilbestrol  (EXP)
dioxygen  (EXP)
dopamine  (ISO)
dorsomorphin  (ISO)
endosulfan  (ISO)
Enterolactone  (ISO)
ethanol  (EXP,ISO)
fenamidone  (EXP)
fenofibrate  (ISO)
ferric ammonium citrate  (ISO)
ferric oxide  (EXP)
flurbiprofen  (EXP)
flutamide  (ISO)
folic acid  (EXP)
formaldehyde  (ISO)
furfural  (ISO)
genistein  (EXP,ISO)
gentamycin  (ISO)
graphite  (ISO)
griseofulvin  (EXP)
hyaluronic acid  (ISO)
hydrogen peroxide  (ISO)
hydroquinone  (ISO)
ibuprofen  (ISO)
indometacin  (ISO)
inulin  (EXP)
ivermectin  (ISO)
ketamine  (ISO)
L-methionine  (EXP)
leflunomide  (ISO)
lipopolysaccharide  (ISO)
lithocholic acid  (EXP)
lucanthone  (ISO)
manganese(II) chloride  (ISO)
mercury dibromide  (ISO)
methamphetamine  (ISO)
methylmercury chloride  (ISO)
mifepristone  (ISO)
N-methyl-4-phenylpyridinium  (ISO)
N-nitrosodiethylamine  (EXP,ISO)
N-nitrosodimethylamine  (ISO)
N-nitrosomorpholine  (ISO)
nefazodone  (ISO)
nickel sulfate  (ISO)
nimesulide  (ISO)
Nonylphenol  (ISO)
O-methyleugenol  (ISO)
ochratoxin A  (ISO)
oxaliplatin  (ISO)
oxycodone  (ISO)
ozone  (EXP,ISO)
p-chloromercuribenzoic acid  (ISO)
panobinostat  (ISO)
paracetamol  (EXP,ISO)
paraquat  (ISO)
PCB138  (ISO)
pentanal  (ISO)
perfluorooctane-1-sulfonic acid  (EXP)
perfluorooctanoic acid  (ISO)
phenobarbital  (EXP)
phenol red  (ISO)
phenylmercury acetate  (ISO)
phorbol 13-acetate 12-myristate  (ISO)
pirinixic acid  (EXP,ISO)
potassium chromate  (ISO)
potassium dichromate  (ISO)
pregnenolone 16alpha-carbonitrile  (EXP,ISO)
progesterone  (ISO)
quercetin  (ISO)
rac-lactic acid  (ISO)
resveratrol  (ISO)
rofecoxib  (ISO)
rotenone  (EXP)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
SB 431542  (ISO)
silicon dioxide  (ISO)
simvastatin  (EXP,ISO)
sodium arsenite  (EXP,ISO)
sodium chloride  (ISO)
sodium fluoride  (EXP)
Soman  (ISO)
streptozocin  (ISO)
sunitinib  (ISO)
tamoxifen  (EXP,ISO)
temozolomide  (ISO)
testosterone  (ISO)
tetrachloromethane  (EXP,ISO)
thioacetamide  (ISO)
thiram  (ISO)
titanium dioxide  (EXP,ISO)
triadimefon  (ISO)
trichloroethene  (ISO)
trichostatin A  (ISO)
triphenyl phosphate  (ISO)
tris(2-butoxyethyl) phosphate  (ISO)
troglitazone  (ISO)
tunicamycin  (ISO)
urethane  (EXP,ISO)
valproic acid  (ISO)
vancomycin  (EXP)
vinclozolin  (ISO)
vorinostat  (ISO)
zearalenone  (EXP)
zinc atom  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. Identification of FGF10 targets in the embryonic lung epithelium during bud morphogenesis. Lu J, etal., J Biol Chem 2005 Feb 11;280(6):4834-41. Epub 2004 Nov 19.
3. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
4. MGDs mouse GO annotations MGD data from the GO Consortium
5. Large-scale screen for genes controlling mammalian embryogenesis, using high-throughput gene expression analysis in mouse embryos. Neidhardt L, etal., Mech Dev 2000 Nov;98(1-2):77-94.
6. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
7. Mouse MP Annotation Import Pipeline RGD automated import pipeline
8. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
9. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
10. Changes in gene expression in experimental glaucoma and optic nerve transection: the equilibrium between protective and detrimental mechanisms. Yang Z, etal., Invest Ophthalmol Vis Sci. 2007 Dec;48(12):5539-48.
Additional References at PubMed
PMID:9511742   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:12477932   PMID:15271968   PMID:16141072   PMID:16141073   PMID:18554416   PMID:19423573   PMID:20831894  
PMID:21267068   PMID:21327095   PMID:21862448   PMID:21873635   PMID:22888117   PMID:25267273   PMID:26182056   PMID:27626380   PMID:28071719   PMID:29463648   PMID:30333137   PMID:32020697  
PMID:32380186   PMID:32569086   PMID:34321999   PMID:37030499   PMID:38310670   PMID:38355793  


Genomics

Comparative Map Data
Anxa3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39596,941,257 - 96,993,825 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl596,941,198 - 96,993,825 (+)EnsemblGRCm39 Ensembl
GRCm38596,793,385 - 96,845,968 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl596,793,339 - 96,845,966 (+)EnsemblGRCm38mm10GRCm38
MGSCv37597,222,404 - 97,274,987 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36597,033,717 - 97,086,270 (+)NCBIMGSCv36mm8
Celera594,124,314 - 94,176,695 (+)NCBICelera
Cytogenetic Map5E3NCBI
cM Map547.29NCBI
ANXA3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38478,551,770 - 78,610,447 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl478,551,747 - 78,610,451 (+)EnsemblGRCh38hg38GRCh38
GRCh37479,472,924 - 79,531,601 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36479,691,766 - 79,750,629 (+)NCBINCBI36Build 36hg18NCBI36
Build 34479,832,767 - 79,888,761NCBI
Celera476,768,779 - 76,827,650 (+)NCBICelera
Cytogenetic Map4q21.21NCBI
HuRef475,219,132 - 75,277,891 (+)NCBIHuRef
CHM1_1479,449,236 - 79,508,101 (+)NCBICHM1_1
T2T-CHM13v2.0481,887,335 - 81,946,029 (+)NCBIT2T-CHM13v2.0
Anxa3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81413,031,675 - 13,085,678 (-)NCBIGRCr8
mRatBN7.21412,727,708 - 12,781,717 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1412,719,795 - 12,781,617 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1412,696,058 - 12,750,404 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01413,995,901 - 14,050,256 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01412,712,209 - 12,766,711 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01414,371,921 - 14,426,503 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1414,364,008 - 14,426,437 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01414,313,646 - 14,368,216 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41414,245,112 - 14,297,100 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11414,245,111 - 14,297,100 (-)NCBI
Celera1412,785,419 - 12,839,165 (-)NCBICelera
RH 3.4 Map14155.77RGD
Cytogenetic Map14p22NCBI
Anxa3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554332,977,513 - 3,044,446 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554332,981,113 - 3,043,894 (+)NCBIChiLan1.0ChiLan1.0
ANXA3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2351,453,965 - 51,512,738 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1451,643,125 - 51,701,882 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0445,585,873 - 45,644,783 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1451,432,846 - 51,491,677 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl451,432,846 - 51,491,677 (-)Ensemblpanpan1.1panPan2
ANXA3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1323,006,000 - 3,049,321 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl323,005,788 - 3,049,049 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3238,844,367 - 38,888,056 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0323,031,716 - 3,075,494 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl323,031,892 - 3,075,494 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1323,019,326 - 3,063,070 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0322,967,436 - 3,010,913 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03237,159,977 - 37,203,480 (-)NCBIUU_Cfam_GSD_1.0
Anxa3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244052859,290,753 - 9,353,506 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366762,153,689 - 2,216,627 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366762,153,752 - 2,216,498 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ANXA3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1873,970,314 - 73,993,039 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2878,208,453 - 78,238,185 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ANXA3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1726,999,136 - 27,060,783 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl726,999,012 - 27,061,692 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660375,382,730 - 5,444,583 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Anxa3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475712,442,577 - 12,502,903 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475712,442,577 - 12,505,367 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Anxa3
3379 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:140
Count of miRNA genes:117
Interacting mature miRNAs:130
Transcripts:ENSMUST00000031447
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4140990Lgq6_mlate growth QTL 6 (mouse)Not determined32133234100777931Mouse
1301399Cpfd3_mcerebellum pattern fissures (mouse)Not determined587386871121387065Mouse
12910784Pwgrq15_mpost-weaning growth rate QTL 15 (mouse)57717582397658215Mouse
1301524Lmb2_mlupus in MRL and B6 F2 cross (mouse)Not determined537581488112465722Mouse
25314315Mlh1fc4_mMLH1 foci count 4 (mouse)574460661132528839Mouse
1357725Eae39_mexperimental allergic encephalomyelitis 39 (mouse)Not determined589418876118864028Mouse
10045972Tir5_mtrypanosome infection response 5 (mouse)Not determined563705442104387065Mouse
1300993Hycdc_mhypercapnic duty cycle (mouse)Not determined590561006124561151Mouse
1301126Bwem1_mbody weight day 30 males 1 (mouse)Not determined587386871121387065Mouse
4141219W10q16_mweight 10 weeks QTL 16 (mouse)Not determined32133234100777931Mouse
12910816Ogrq2_moverall growth rate QTL 2 (mouse)57717582397658215Mouse
1301691Cdcs10_mcytokine deficiency colitis susceptibility 10 (mouse)Not determined576280786110280917Mouse
10402486Dipa1_mdrug induced psychomotor activation 1 (mouse)Not determined595465549129465722Mouse
11041665Lmr24_mleishmaniasis resistance 24 (mouse)552694462107321041Mouse
10043958Chldq12_mcholesterol and HDL QTL 12 (mouse)Not determined587386871121387065Mouse
26884395Humsd2_mhumerus midshaft diameter 2, 10 week (mouse)570057343132528839Mouse
1301419Cypr3_mcytokine production 3 (mouse)Not determined581019649115019803Mouse
11341716Rvfs3_mRift Valley fever susceptibility 3 (mouse)526441234138455402Mouse
13506928Recrq8_mrecombination rate in male meiosis QTL 8 (mouse)574460661132528839Mouse
10043993Hbnr10_mHeligmosomoides bakeri nematode resistance 10 (mouse)Not determined572418876106419011Mouse
27226719Tibw6_mtibia width 6, proximal, 16 week (mouse)572857343139985755Mouse
10401246Bglu13_mblood glucose level 13 (mouse)Not determined579539640113539786Mouse
4141438Skmw13_mskeletal muscle weight 13 (mouse)Not determined576190263110190479Mouse
1301713Dbsty2_mdiabesity 2 (mouse)Not determined576445064110445225Mouse
1301457Cfsw2_mcystic fibrosis survival to weaning 2 (mouse)Not determined590561006124561151Mouse
11041899Lmr24a_mleishmaniasis resistance 24a (mouse)552694462107321041Mouse
10401245Bglu18_mblood glucose level 18 (mouse)Not determined582838468116838597Mouse
1301974Chab7_mcholesterol absorption 7 (mouse)Not determined595233214129233330Mouse
4142064Tmc1m4_mTmc1 modifier 4 (mouse)Not determined554500177127001072Mouse
1300931Cocrb6_mcocaine related behavior 6 (mouse)Not determined576445064110445225Mouse
4142317Rgcs1_mretinal ganglion cell susceptible 1 (mouse)Not determined55388334108762627Mouse
1300801Drb2_mdopamine receptor binding 2 (mouse)Not determined587386871121387065Mouse
1301829Thyls2_mthymic lymphoma susceptibility 2 (mouse)Not determined576445064110445225Mouse
9587780Afw16_mabdominal fat weight QTL 16 (mouse)Not determined592830166126830285Mouse
1357644Egrd1_mearly growth rate, direct effect 1 (mouse)Not determined595434580129434786Mouse
1300940Actd3_mactivity-distance traveled 3 (mouse)Not determined596320385130320533Mouse
12904740M1fscn2_mmodifier 1 of Fscn2 (mouse)566529661100529661Mouse
10755524Mono1_mmonocyte differential 1 (mouse)580849259114849259Mouse
1301362Prnr1_mprion resistance 1 (mouse)Not determined589418876146787935Mouse
1558774Lith17_mlithogenic gene 17 (mouse)Not determined595465549129465722Mouse
1357431Cia27_mcollagen induced arthritis 27 (mouse)Not determined575315348120018629Mouse
12904739M2fscn2_mmodifier 2 of FSCN2 (mouse)566529661100529661Mouse
1301243Bmd2_mbone mineral density 2 (mouse)Not determined555388334100455525Mouse
1300986Hdlq2_mHDL QTL 2 (mouse)Not determined576280786110280917Mouse
11049560Lmr24d_mleishmaniasis resistance 24d (mouse)56437487798374996Mouse
11049562Lmr24f_mleishmaniasis resistance 24f (mouse)590320962124321041Mouse
13464249Ahl16_mage related hearing loss, early onset 16 (mouse)576445064110445225Mouse
13464244Ahl19_mage related hearing loss, early onset 19 (mouse)595465549129465722Mouse
4141124Dshv2_mdorsal hippocampal volume 2 (mouse)Not determined57531534898019803Mouse
1300968Skts4_mskin tumor susceptibility 4 (mouse)Not determined589418876124238239Mouse
13464241Ahl18_mage related hearing loss, early onset 18 (mouse)587386871121387065Mouse
4141505Chlq14_mcirculating hormone level QTL 14 (mouse)Not determined576280786110280917Mouse
13464242Ahl17_mage related hearing loss, early onset 17 (mouse)582838468116838597Mouse

Markers in Region
AJ001633  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38596,845,620 - 96,845,714UniSTSGRCm38
MGSCv37597,274,639 - 97,274,733UniSTSGRCm37
Celera594,176,347 - 94,176,441UniSTS
Cytogenetic Map5E3UniSTS
cM Map554.0UniSTS
Whitehead/MRC_RH51173.5UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001420107 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001420108 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001420109 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_013470 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC121829 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC121887 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ001633 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK013850 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK090055 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK150922 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK150951 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK151771 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK152837 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK152863 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK166389 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168396 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168507 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK169113 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK169423 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC090634 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC141167 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466529 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT010280 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000031447   ⟹   ENSMUSP00000031447
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl596,941,244 - 96,993,825 (+)Ensembl
GRCm38.p6 Ensembl596,793,385 - 96,845,966 (+)Ensembl
Ensembl Acc Id: ENSMUST00000196126   ⟹   ENSMUSP00000143103
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl596,989,857 - 96,993,719 (+)Ensembl
GRCm38.p6 Ensembl596,841,998 - 96,845,860 (+)Ensembl
Ensembl Acc Id: ENSMUST00000197196
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl596,975,789 - 96,978,347 (+)Ensembl
GRCm38.p6 Ensembl596,827,930 - 96,830,488 (+)Ensembl
Ensembl Acc Id: ENSMUST00000197339
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl596,964,146 - 96,986,198 (+)Ensembl
GRCm38.p6 Ensembl596,816,287 - 96,838,339 (+)Ensembl
Ensembl Acc Id: ENSMUST00000198631   ⟹   ENSMUSP00000143491
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl596,941,363 - 96,973,767 (+)Ensembl
GRCm38.p6 Ensembl596,793,504 - 96,825,908 (+)Ensembl
Ensembl Acc Id: ENSMUST00000199330   ⟹   ENSMUSP00000143615
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl596,941,198 - 96,964,254 (+)Ensembl
GRCm38.p6 Ensembl596,793,339 - 96,816,395 (+)Ensembl
Ensembl Acc Id: ENSMUST00000199390
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl596,977,942 - 96,993,541 (+)Ensembl
GRCm38.p6 Ensembl596,830,083 - 96,845,682 (+)Ensembl
Ensembl Acc Id: ENSMUST00000199656
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl596,958,925 - 96,982,765 (+)Ensembl
GRCm38.p6 Ensembl596,811,066 - 96,834,906 (+)Ensembl
Ensembl Acc Id: ENSMUST00000200379   ⟹   ENSMUSP00000142527
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl596,941,300 - 96,972,826 (+)Ensembl
GRCm38.p6 Ensembl596,793,441 - 96,824,967 (+)Ensembl
RefSeq Acc Id: NM_001420107   ⟹   NP_001407036
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39596,941,257 - 96,993,825 (+)NCBI
RefSeq Acc Id: NM_001420108   ⟹   NP_001407037
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39596,941,257 - 96,993,825 (+)NCBI
RefSeq Acc Id: NM_001420109   ⟹   NP_001407038
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39596,941,257 - 96,993,825 (+)NCBI
RefSeq Acc Id: NM_013470   ⟹   NP_038498
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39596,941,257 - 96,993,825 (+)NCBI
GRCm38596,793,385 - 96,845,968 (+)ENTREZGENE
MGSCv37597,222,404 - 97,274,987 (+)RGD
Celera594,124,314 - 94,176,695 (+)RGD
cM Map5 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_038498   ⟸   NM_013470
- Peptide Label: isoform 1
- UniProtKB: Q3UBI0 (UniProtKB/Swiss-Prot),   O35639 (UniProtKB/Swiss-Prot),   Q3TFK4 (UniProtKB/TrEMBL),   Q3U737 (UniProtKB/TrEMBL),   Q8C1X9 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSMUSP00000143491   ⟸   ENSMUST00000198631
Ensembl Acc Id: ENSMUSP00000031447   ⟸   ENSMUST00000031447
Ensembl Acc Id: ENSMUSP00000143615   ⟸   ENSMUST00000199330
Ensembl Acc Id: ENSMUSP00000143103   ⟸   ENSMUST00000196126
Ensembl Acc Id: ENSMUSP00000142527   ⟸   ENSMUST00000200379
RefSeq Acc Id: NP_001407036   ⟸   NM_001420107
- Peptide Label: isoform 1
- UniProtKB: Q3UBI0 (UniProtKB/Swiss-Prot),   O35639 (UniProtKB/Swiss-Prot),   Q3TFK4 (UniProtKB/TrEMBL),   Q3U737 (UniProtKB/TrEMBL),   Q8C1X9 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001407038   ⟸   NM_001420109
- Peptide Label: isoform 2
RefSeq Acc Id: NP_001407037   ⟸   NM_001420108
- Peptide Label: isoform 1
- UniProtKB: Q3UBI0 (UniProtKB/Swiss-Prot),   O35639 (UniProtKB/Swiss-Prot),   Q3TFK4 (UniProtKB/TrEMBL),   Q3U737 (UniProtKB/TrEMBL),   Q8C1X9 (UniProtKB/TrEMBL)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-O35639-F1-model_v2 AlphaFold O35639 1-323 view protein structure

Promoters
RGD ID:6887226
Promoter ID:EPDNEW_M7064
Type:initiation region
Name:Anxa3_1
Description:Mus musculus annexin A3 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M7065  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38596,793,398 - 96,793,458EPDNEW
RGD ID:6887228
Promoter ID:EPDNEW_M7065
Type:multiple initiation site
Name:Anxa3_2
Description:Mus musculus annexin A3 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M7064  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38596,796,090 - 96,796,150EPDNEW
RGD ID:6837089
Promoter ID:MM_KWN:43001
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   ES_Cell,   Lung,   MEF_B4,   MEF_B6
Transcripts:NM_013470,   UC008YFL.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36597,221,746 - 97,222,637 (+)MPROMDB
RGD ID:6837088
Promoter ID:MM_KWN:43002
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   MEF_B6
Transcripts:ENSMUST00000031447
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36597,238,156 - 97,238,656 (+)MPROMDB
RGD ID:6837109
Promoter ID:MM_KWN:43003
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_2Hour
Transcripts:UC008YFN.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36597,239,546 - 97,240,046 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1201378 AgrOrtholog
Ensembl Genes ENSMUSG00000029484 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000031447 ENTREZGENE
  ENSMUST00000031447.12 UniProtKB/Swiss-Prot
  ENSMUST00000196126.2 UniProtKB/TrEMBL
  ENSMUST00000198631.2 UniProtKB/TrEMBL
  ENSMUST00000199330.5 UniProtKB/TrEMBL
  ENSMUST00000200379.5 UniProtKB/TrEMBL
Gene3D-CATH 1.10.220.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Annexin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Annexin_repeat UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Annexin_repeat_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Annexin_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ANX3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:11745 UniProtKB/Swiss-Prot
MGD MGI:1201378 ENTREZGENE
NCBI Gene 11745 ENTREZGENE
PANTHER ANNEXIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR10502:SF25 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Annexin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Anxa3 PhenoGen
PRINTS ANNEXIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ANNEXINIII UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE ANNEXIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ANNEXIN_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART ANX UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF47874 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0G2JDV9_MOUSE UniProtKB/TrEMBL
  A0A0G2JFB3_MOUSE UniProtKB/TrEMBL
  A0A0G2JGL7_MOUSE UniProtKB/TrEMBL
  ANXA3_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q3TET3_MOUSE UniProtKB/TrEMBL
  Q3TFK4 ENTREZGENE, UniProtKB/TrEMBL
  Q3TLP4_MOUSE UniProtKB/TrEMBL
  Q3U737 ENTREZGENE, UniProtKB/TrEMBL
  Q3UBI0 ENTREZGENE
  Q8C1X9 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary Q3UBI0 UniProtKB/Swiss-Prot