Dnajb1 (DnaJ heat shock protein family (Hsp40) member B1) - Rat Genome Database

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Gene: Dnajb1 (DnaJ heat shock protein family (Hsp40) member B1) Mus musculus
Analyze
Symbol: Dnajb1
Name: DnaJ heat shock protein family (Hsp40) member B1
RGD ID: 1312337
MGI Page MGI
Description: Enables protein folding chaperone. Involved in protein folding. Acts upstream of or within chaperone cofactor-dependent protein refolding. Predicted to be located in several cellular components, including dendritic spine; neuronal cell body; and sperm head. Predicted to be active in cytosol; glutamatergic synapse; and postsynaptic density. Is expressed in several structures, including central nervous system and retina. Orthologous to human DNAJB1 (DnaJ heat shock protein family (Hsp40) member B1).
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: 0610007I11Rik; DjB1; DnaJ (Hsp40) homolog, subfamily B, member 1; dnaJ homolog subfamily B member 1; Hdj1; heat shock 40 kDa protein 1; heat shock protein 40; Hsp; Hsp40; HSPF1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39884,334,804 - 84,339,282 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl884,334,822 - 84,339,282 (+)EnsemblGRCm39 Ensembl
GRCm38883,608,175 - 83,612,653 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl883,608,193 - 83,612,653 (+)EnsemblGRCm38mm10GRCm38
MGSCv37886,132,074 - 86,135,802 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36886,498,298 - 86,502,008 (+)NCBIMGSCv36mm8
Celera887,895,947 - 87,899,699 (+)NCBICelera
Cytogenetic Map8C2NCBI
cM Map840.22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dimethylhydrazine  (EXP)
1-naphthyl isothiocyanate  (ISO)
17alpha-ethynylestradiol  (EXP,ISO)
17beta-estradiol  (ISO)
1H-pyrazole  (EXP)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4,6-tribromophenol  (ISO)
2,4-dinitrotoluene  (ISO)
2-hydroxypropanoic acid  (ISO)
2-methylcholine  (ISO)
3-chloropropane-1,2-diol  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-amino-2,6-dinitrotoluene  (ISO)
acetamide  (ISO)
acrolein  (ISO)
acrylamide  (ISO)
aflatoxin B1  (ISO)
albendazole  (ISO)
all-trans-retinoic acid  (EXP,ISO)
alpha-pinene  (ISO)
antimonite  (ISO)
arotinoid acid  (ISO)
arsenite(3-)  (EXP,ISO)
arsenous acid  (ISO)
azoxystrobin  (ISO)
Bardoxolone methyl  (ISO)
bathocuproine disulfonic acid  (ISO)
belinostat  (ISO)
benzene  (ISO)
benzene-1,2,4-triol  (ISO)
benzo[a]pyrene  (EXP,ISO)
Benzo[k]fluoranthene  (EXP)
bilirubin IXalpha  (ISO)
bis(2-ethylhexyl) phthalate  (EXP,ISO)
bisphenol A  (EXP,ISO)
bortezomib  (ISO)
buspirone  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
cadmium sulfate  (ISO)
cannabidiol  (ISO)
carbamazepine  (ISO)
carbon nanotube  (EXP)
chenodeoxycholic acid  (ISO)
CHIR 99021  (ISO)
chloropicrin  (ISO)
chloroprene  (EXP)
chlorpyrifos  (EXP,ISO)
chromium(6+)  (EXP)
ciguatoxin CTX1B  (EXP)
cisplatin  (ISO)
clofibrate  (EXP)
cobalt dichloride  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) chloride  (ISO)
copper(II) sulfate  (ISO)
cortisol  (ISO)
crocidolite asbestos  (ISO)
crotonaldehyde  (ISO)
CU-O LINKAGE  (ISO)
Cuprizon  (ISO)
cyclophosphamide  (ISO)
cyclosporin A  (ISO)
decabromodiphenyl ether  (ISO)
deguelin  (ISO)
deoxycholic acid  (ISO)
dexamethasone  (ISO)
diarsenic trioxide  (ISO)
diazinon  (ISO)
dibenz[a,h]anthracene  (EXP)
dibutyl phthalate  (ISO)
diclofenac  (ISO)
dieldrin  (ISO)
diethyl maleate  (ISO)
dipotassium bis[mu-tartrato(4-)]diantimonate(2-) trihydrate  (ISO)
disulfiram  (ISO)
diuron  (ISO)
dorsomorphin  (ISO)
doxorubicin  (EXP,ISO)
elesclomol  (ISO)
emodin  (ISO)
endosulfan  (ISO)
epoxiconazole  (EXP,ISO)
ethanol  (EXP)
fenofibrate  (ISO)
flutamide  (ISO)
FR900359  (ISO)
gefitinib  (ISO)
gentamycin  (ISO)
gliotoxin  (ISO)
glycochenodeoxycholic acid  (ISO)
glycocholic acid  (ISO)
glycodeoxycholic acid  (ISO)
glyphosate  (ISO)
haloperidol  (ISO)
hydrogen peroxide  (ISO)
hydroquinone  (ISO)
imidacloprid  (ISO)
indometacin  (ISO)
iron dichloride  (ISO)
iron(2+) sulfate (anhydrous)  (ISO)
ivermectin  (ISO)
L-ascorbic acid  (ISO)
L-ascorbic acid 2-phosphate  (ISO)
lead diacetate  (EXP)
leflunomide  (ISO)
Licochalcone B  (ISO)
linalool  (ISO)
lipopolysaccharide  (EXP,ISO)
menadione  (ISO)
mercury dibromide  (ISO)
metacetamol  (EXP)
methamphetamine  (ISO)
methotrexate  (EXP)
methyl methanesulfonate  (ISO)
methylisothiazolinone  (ISO)
methylmercury chloride  (ISO)
mono(2-ethylhexyl) phthalate  (ISO)
motexafin gadolinium  (ISO)
N-acetyl-L-cysteine  (ISO)
N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal  (EXP)
N-methyl-4-phenylpyridinium  (ISO)
N-nitrosodiethylamine  (EXP,ISO)
nefazodone  (ISO)
nickel atom  (ISO)
nimesulide  (ISO)
organoselenium compound  (ISO)
ozone  (ISO)
p-chloromercuribenzoic acid  (ISO)
paracetamol  (EXP,ISO)
paraquat  (ISO)
perfluorooctanoic acid  (ISO)
phenobarbital  (EXP,ISO)
phlorizin  (EXP)
pirinixic acid  (EXP,ISO)
piroxicam  (ISO)
progesterone  (ISO)
propanil  (ISO)
propiconazole  (EXP)
Propiverine  (ISO)
pyrrolidine dithiocarbamate  (ISO)
rac-lactic acid  (ISO)
raloxifene  (ISO)
resorcinol  (ISO)
resveratrol  (EXP)
SB 431542  (ISO)
SCH 23390  (ISO)
silicon dioxide  (EXP,ISO)
silver atom  (ISO)
silver(0)  (ISO)
silver(1+) nitrate  (ISO)
sodium arsenite  (EXP,ISO)
sodium dichromate  (ISO)
Soman  (ISO)
sulforaphane  (EXP)
sunitinib  (ISO)
tamoxifen  (EXP)
tebufenpyrad  (ISO)
temozolomide  (ISO)
tert-butyl hydroperoxide  (ISO)
tetrachloromethane  (EXP,ISO)
tetraphene  (EXP)
thalidomide  (ISO)
thiabendazole  (ISO)
thimerosal  (ISO)
thioacetamide  (ISO)
titanium dioxide  (EXP,ISO)
toluene  (ISO)
trichostatin A  (ISO)
triptonide  (EXP)
troglitazone  (EXP)
tunicamycin  (ISO)
urethane  (ISO)
valproic acid  (ISO)
vinclozolin  (ISO)
vincristine  (ISO)
XAV939  (ISO)
zinc acetate  (ISO)
zinc atom  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
5. Mouse MP Annotation Import Pipeline RGD automated import pipeline
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
7. Chaperone mediated autophagy to the rescue: A new-fangled target for the treatment of neurodegenerative diseases. Xilouri M and Stefanis L, Mol Cell Neurosci. 2015 May;66(Pt A):29-36. doi: 10.1016/j.mcn.2015.01.003. Epub 2015 Feb 25.
Additional References at PubMed
PMID:10349636   PMID:10570961   PMID:10922068   PMID:10942430   PMID:11042159   PMID:11076861   PMID:11092732   PMID:11754079   PMID:12477932   PMID:12748967   PMID:12904583   PMID:14610273  
PMID:14644449   PMID:15379887   PMID:15483628   PMID:15489334   PMID:15782199   PMID:16141072   PMID:16141073   PMID:16602821   PMID:16955402   PMID:17050614   PMID:17427954   PMID:17661394  
PMID:18663603   PMID:19242542   PMID:19718689   PMID:20117194   PMID:21267068   PMID:21677750   PMID:21832061   PMID:21873635   PMID:22666389   PMID:23226463   PMID:23375831   PMID:23592311  
PMID:23603448   PMID:23967293   PMID:25018089   PMID:25131634   PMID:25352652   PMID:25772468   PMID:27218149   PMID:27496612   PMID:28531192   PMID:28923495   PMID:29162699   PMID:30196744  
PMID:31138677   PMID:32325033   PMID:35449600   PMID:37859693  


Genomics

Comparative Map Data
Dnajb1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39884,334,804 - 84,339,282 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl884,334,822 - 84,339,282 (+)EnsemblGRCm39 Ensembl
GRCm38883,608,175 - 83,612,653 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl883,608,193 - 83,612,653 (+)EnsemblGRCm38mm10GRCm38
MGSCv37886,132,074 - 86,135,802 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36886,498,298 - 86,502,008 (+)NCBIMGSCv36mm8
Celera887,895,947 - 87,899,699 (+)NCBICelera
Cytogenetic Map8C2NCBI
cM Map840.22NCBI
DNAJB1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381914,514,769 - 14,560,391 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1914,514,769 - 14,560,391 (-)EnsemblGRCh38hg38GRCh38
GRCh371914,625,581 - 14,640,083 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361914,486,582 - 14,490,201 (-)NCBINCBI36Build 36hg18NCBI36
Build 341914,486,581 - 14,490,201NCBI
Celera1914,519,709 - 14,523,328 (-)NCBICelera
Cytogenetic Map19p13.12NCBI
HuRef1914,195,571 - 14,199,191 (-)NCBIHuRef
CHM1_11914,625,542 - 14,629,161 (-)NCBICHM1_1
T2T-CHM13v2.01914,641,477 - 14,655,999 (-)NCBIT2T-CHM13v2.0
Dnajb1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81941,427,453 - 41,431,141 (-)NCBIGRCr8
mRatBN7.21924,522,731 - 24,526,419 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1924,522,717 - 24,526,458 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1931,344,056 - 31,347,744 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01931,998,467 - 32,002,155 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01934,221,242 - 34,224,930 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01924,747,178 - 24,750,919 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1924,747,178 - 24,750,919 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01935,726,334 - 35,730,075 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41926,213,739 - 26,217,480 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11926,218,578 - 26,222,306 (-)NCBI
Celera1924,065,512 - 24,069,253 (-)NCBICelera
Cytogenetic Map19q11NCBI
Dnajb1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541533,098,210 - 33,103,143 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541533,098,503 - 33,102,125 (-)NCBIChiLan1.0ChiLan1.0
DNAJB1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22019,444,576 - 19,448,373 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11918,446,832 - 18,450,618 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01914,078,201 - 14,081,884 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11914,921,219 - 14,926,473 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1914,922,389 - 14,926,268 (-)Ensemblpanpan1.1panPan2
DNAJB1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12048,120,604 - 48,131,091 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2048,121,379 - 48,130,060 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2047,997,072 - 48,007,556 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02048,637,524 - 48,648,012 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2048,644,175 - 48,648,009 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12047,851,456 - 47,861,943 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02048,277,833 - 48,288,317 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02048,520,662 - 48,531,368 (+)NCBIUU_Cfam_GSD_1.0
Dnajb1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118207,303,265 - 207,315,402 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366593,039,277 - 3,042,972 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366593,039,304 - 3,051,373 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DNAJB1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl264,758,957 - 64,765,485 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1264,761,672 - 64,764,482 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2265,176,572 - 65,180,388 (-)NCBISscrofa10.2Sscrofa10.2susScr3
DNAJB1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1613,173,197 - 13,176,826 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl613,173,157 - 13,176,877 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660746,478,080 - 6,481,855 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dnajb1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046249011,631,275 - 1,652,488 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046249011,631,789 - 1,643,026 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Dnajb1
116 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:388
Count of miRNA genes:283
Interacting mature miRNAs:326
Transcripts:ENSMUST00000005620
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4140967Bmd39_mbone mineral density 39 (mouse)Not determined832506572117965439Mouse
1558875Eae31_mexperimental allergic encephalomyelitis susceptibility 31 (mouse)Not determined835109930115563747Mouse
1301013Capsq4_mcapsaicin sensitivity related QTL 4 (mouse)Not determined83663015493455280Mouse
27226754Femd6_mfemur midshaft diameter 6, 10 week (mouse)837867154110326632Mouse
12904744Carcdq1_mcardiac collagen deposition QTL 1 (mouse)84016229795416226Mouse
14746987Manh64_mmandible shape 64 (mouse)85050595884505958Mouse
14747005Mancz7_mmandible centroid size 7 (mouse)85050595884505958Mouse
14700686Civq3_mcerebral infarct volume QTL 3 (mouse)85233484386334843Mouse
1301506Aevm1_mautoimmune extremity vasculitis in MRL mice 1 (mouse)Not determined85474046188740637Mouse
1301952Im3_mimmunoregulatory 3 (mouse)Not determined85515925889159407Mouse
10412287Carg3_mCandida albicans resistance gene 3 (mouse)Not determined85629887290298872Mouse
11353828Gf7_mgonadal fat pad weight 7 (mouse)85892810792928107Mouse
10043975Obq31_mobesity QTL 31 (mouse)Not determined85913640493136404Mouse
1301688Orch6_mautoimmune orchitis resistance 6 (mouse)Not determined86151347995513605Mouse
4141285Tgq18_mtriglyceride QTL 18 (mouse)Not determined6418673698186736Mouse
4141797Skmw16_mskeletal muscle weight 16 (mouse)Not determined86466617698666325Mouse
1357787Vtbt5_mvertebral trabecular bone trait 5 (mouse)Not determined866084397100084549Mouse
10043992Hbnr11_mHeligmosomoides bakeri nematode resistance 11 (mouse)Not determined866326836100326976Mouse
4142283Imraq2_mimmune response to AAV2 QTL 2 (mouse)Not determined871032003105032123Mouse
1301767Fcsa2_mfemoral cross-sectional area 2 (mouse)Not determined871032003105032123Mouse
4141395Char2a_mP. chabaudi malaria resistance QTL 2a (mouse)Not determined7158942790929226Mouse
1357708Orq1_movulation rate QTL 1 (mouse)Not determined871740461124622354Mouse
4142023W3q5_mweight 3 weeks QTL 5 (mouse)Not determined71740461124622354Mouse
1558780Idd22_minsulin dependent diabetes susceptibility 22 (mouse)Not determined871829531105829637Mouse
1301872Cd4ts3_mCD4 T cell subset 3 (mouse)Not determined872122809106123021Mouse
1300920Pitm3_mprion incubation time 3 (mouse)Not determined873929123107929226Mouse
27095912Pglq14_mpelvic girdle length QTL 14, 16 week (mouse)874126628126826739Mouse
1558890Lith18_mlithogenic gene 18 (mouse)Not determined876402145110402251Mouse
1357470Obq16_mobesity QTL 16 (mouse)Not determined876411976110412125Mouse
10412234Nhdlq14_mnon-HDL QTL 14 (mouse)Not determined876411976110412125Mouse
1301874Hdlq16_mHDL QTL 16 (mouse)Not determined876411976110412125Mouse
1301099Cbm2_mcerebellum weight 2 (mouse)Not determined879245241113245331Mouse
1301581Char2_mP. chabaudi malaria resistance QTL 2 (mouse)Not determined879808806113809031Mouse
12904012Cfq10_mconditioned fear QTL 10 (mouse)88079340489740987Mouse
10755530Wbc2_mwhite blood cell count 2 (mouse)881819296115819296Mouse
10755519Wbc1_mwhite blood cell count 1 (mouse)882345783116345783Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001308227 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_018808 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AA266407 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AA794374 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB028272 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB028273 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB034827 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC151992 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK002290 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK135947 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK146657 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK158530 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK160924 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK164392 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167718 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168220 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168291 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK185089 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK186924 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK187532 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK198033 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK200247 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK208488 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK217546 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK218225 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC012962 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY251864 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY476619 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY658568 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466525 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000005620   ⟹   ENSMUSP00000005620
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl884,334,822 - 84,339,282 (+)Ensembl
GRCm38.p6 Ensembl883,608,193 - 83,612,653 (+)Ensembl
RefSeq Acc Id: ENSMUST00000212300   ⟹   ENSMUSP00000148685
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl884,335,182 - 84,339,282 (+)Ensembl
GRCm38.p6 Ensembl883,608,553 - 83,612,653 (+)Ensembl
RefSeq Acc Id: NM_001308227   ⟹   NP_001295156
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39884,335,177 - 84,339,282 (+)NCBI
GRCm38883,608,548 - 83,612,653 (+)NCBI
Sequence:
RefSeq Acc Id: NM_018808   ⟹   NP_061278
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39884,334,804 - 84,339,282 (+)NCBI
GRCm38883,608,175 - 83,612,653 (+)NCBI
MGSCv37886,132,074 - 86,135,802 (+)RGD
Celera887,895,947 - 87,899,699 (+)RGD
cM Map8 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_061278   ⟸   NM_018808
- Peptide Label: isoform 1
- UniProtKB: Q9QYJ3 (UniProtKB/Swiss-Prot),   Q3TU79 (UniProtKB/TrEMBL),   Q3TIT6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001295156   ⟸   NM_001308227
- Peptide Label: isoform 2
- UniProtKB: Q3TYL7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000148685   ⟸   ENSMUST00000212300
RefSeq Acc Id: ENSMUSP00000005620   ⟸   ENSMUST00000005620
Protein Domains
Chaperone DnaJ C-terminal   J

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9QYJ3-F1-model_v2 AlphaFold Q9QYJ3 1-340 view protein structure

Promoters
RGD ID:8667609
Promoter ID:EPDNEW_M11836
Type:initiation region
Name:Dnajb1_1
Description:Mus musculus DnaJ heat shock protein family member B1 , transcriptvariant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38883,608,273 - 83,608,333EPDNEW
RGD ID:6843038
Promoter ID:MM_KWN:55010
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_018808,   UC009MKQ.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36886,131,711 - 86,132,297 (+)MPROMDB
RGD ID:6848884
Promoter ID:MM_TRO:9593
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   MEF_B6
Transcripts:MTR005771.8.1486.3
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36886,132,561 - 86,133,061 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1931874 AgrOrtholog
Ensembl Genes ENSMUSG00000005483 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000005620 ENTREZGENE
  ENSMUST00000005620.10 UniProtKB/Swiss-Prot
  ENSMUST00000212300 ENTREZGENE
  ENSMUST00000212300.2 UniProtKB/TrEMBL
Gene3D-CATH 1.10.287.110 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Urease metallochaperone UreE, N-terminal domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro DnaJ_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DnaJ_domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DnaJ_domain_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HSP40/DnaJ_pept-bd UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  J_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:81489 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1931874 ENTREZGENE
NCBI Gene 81489 ENTREZGENE
PANTHER DNAJ HOMOLOG SUBFAMILY B MEMBER 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DNAJ HOMOLOG SUBFAMILY C MEMBER UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam DnaJ UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DnaJ_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Dnajb1 PhenoGen
PRINTS JDOMAIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE DNAJ_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DNAJ_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART DnaJ UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF46565 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF49493 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt DNJB1_MOUSE UniProtKB/Swiss-Prot
  Q3TIT6 ENTREZGENE, UniProtKB/TrEMBL
  Q3TU79 ENTREZGENE, UniProtKB/TrEMBL
  Q3TYL7 ENTREZGENE, UniProtKB/TrEMBL
  Q9QYJ3 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-12-22 Dnajb1  DnaJ heat shock protein family (Hsp40) member B1    DnaJ (Hsp40) homolog, subfamily B, member 1  Symbol and/or name change 5135510 APPROVED