Ephb1 (Eph receptor B1) - Rat Genome Database
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Gene: Ephb1 (Eph receptor B1) Mus musculus
Analyze
Symbol: Ephb1
Name: Eph receptor B1
RGD ID: 1551682
MGI Page MGI
Description: Is expressed in several structures, including 1st branchial arch; brain; lower urinary tract; sensory organ; and vascular system. Orthologous to human EPHB1 (EPH receptor B1); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; INTERACTS WITH 2,3',4,4',5-Pentachlorobiphenyl; 4,4'-diaminodiphenylmethane; 5-aza-2'-deoxycytidine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 9330129L11; AW488255; C130099E04Rik; Cek6; El; Elk; Elkh; ENSMUSG00000074119; ephrin type-B receptor 1; Hek6; Ne; Net
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399101,799,327 - 102,231,892 (-)NCBIGRCm39mm39
GRCm39 Ensembl9101,799,327 - 102,231,892 (-)Ensembl
GRCm389101,922,128 - 102,354,693 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9101,922,128 - 102,354,693 (-)EnsemblGRCm38mm10GRCm38
MGSCv379101,824,458 - 102,257,023 (-)NCBIGRCm37mm9NCBIm37
MGSCv369101,778,391 - 102,210,896 (-)NCBImm8
Celera9101,458,328 - 101,902,746 (-)NCBICelera
Cytogenetic Map9F1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View
References

Additional References at PubMed
PMID:7609620   PMID:8798570   PMID:8889548   PMID:8954633   PMID:9267020   PMID:10207129   PMID:10349636   PMID:10495276   PMID:10625551   PMID:10683176   PMID:10704386   PMID:10705993  
PMID:10729342   PMID:10839360   PMID:11042159   PMID:11076861   PMID:11114734   PMID:11165475   PMID:11217851   PMID:11403717   PMID:11493560   PMID:11532925   PMID:12093895   PMID:12217323  
PMID:12477932   PMID:12684176   PMID:12684184   PMID:12925710   PMID:12971893   PMID:14681479   PMID:14691139   PMID:14988728   PMID:15014111   PMID:15107421   PMID:15147765   PMID:15489334  
PMID:15502157   PMID:15509764   PMID:15509772   PMID:15537545   PMID:15663472   PMID:15858069   PMID:15917450   PMID:15932593   PMID:15965473   PMID:16141072   PMID:16141073   PMID:16354917  
PMID:16421308   PMID:16446123   PMID:16476740   PMID:16602821   PMID:16701205   PMID:16786562   PMID:16854408   PMID:17310244   PMID:17561836   PMID:17638910   PMID:17668899   PMID:17785183  
PMID:17884558   PMID:18034775   PMID:18057206   PMID:18287559   PMID:18417618   PMID:18524895   PMID:18614029   PMID:18651661   PMID:18706764   PMID:18713744   PMID:19004857   PMID:19025592  
PMID:19036983   PMID:19109910   PMID:19182796   PMID:19295152   PMID:19303107   PMID:19403835   PMID:19515977   PMID:19523204   PMID:19542359   PMID:19571816   PMID:19769959   PMID:19859539  
PMID:19940181   PMID:20053908   PMID:20112066   PMID:20616004   PMID:20816794   PMID:21267068   PMID:21465626   PMID:21490208   PMID:21559471   PMID:21658587   PMID:21677750   PMID:21847105  
PMID:21873635   PMID:21964490   PMID:22021100   PMID:22103419   PMID:22171039   PMID:22365545   PMID:22434763   PMID:22475621   PMID:22492037   PMID:22579729   PMID:22622783   PMID:22689450  
PMID:22833130   PMID:22879882   PMID:22923088   PMID:23129351   PMID:23143520   PMID:23147113   PMID:23318582   PMID:23341972   PMID:23558405   PMID:23578932   PMID:23649798   PMID:23884953  
PMID:23973554   PMID:24038449   PMID:24305805   PMID:24360543   PMID:24453220   PMID:24771490   PMID:24952961   PMID:24997765   PMID:25051176   PMID:25673830   PMID:25879388   PMID:25923646  
PMID:26027930   PMID:26063906   PMID:26138486   PMID:26148571   PMID:26269635   PMID:26549443   PMID:26620267   PMID:26633881   PMID:26764128   PMID:26830346   PMID:26839344   PMID:26941654  
PMID:27035151   PMID:27446912   PMID:27683910   PMID:28558017   PMID:28595615   PMID:29079839   PMID:29229772   PMID:29236320   PMID:29322522   PMID:29550816   PMID:29901151   PMID:29938386  
PMID:30185604   PMID:30820459   PMID:31073041   PMID:31633063   PMID:32092051   PMID:32404061   PMID:32561725   PMID:32994168  


Genomics

Comparative Map Data
Ephb1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399101,799,327 - 102,231,892 (-)NCBIGRCm39mm39
GRCm39 Ensembl9101,799,327 - 102,231,892 (-)Ensembl
GRCm389101,922,128 - 102,354,693 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9101,922,128 - 102,354,693 (-)EnsemblGRCm38mm10GRCm38
MGSCv379101,824,458 - 102,257,023 (-)NCBIGRCm37mm9NCBIm37
MGSCv369101,778,391 - 102,210,896 (-)NCBImm8
Celera9101,458,328 - 101,902,746 (-)NCBICelera
Cytogenetic Map9F1NCBI
EPHB1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl3134,597,801 - 135,260,467 (+)EnsemblGRCh38hg38GRCh38
GRCh383134,595,264 - 135,260,467 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh373134,514,102 - 134,979,309 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 363135,996,950 - 136,461,999 (+)NCBINCBI36hg18NCBI36
Build 343135,996,957 - 136,462,003NCBI
Celera3132,940,535 - 133,405,242 (+)NCBI
Cytogenetic Map3q22.2NCBI
HuRef3131,890,822 - 132,356,715 (+)NCBIHuRef
CHM1_13134,478,274 - 134,942,745 (+)NCBICHM1_1
Ephb1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.28102,507,549 - 102,944,839 (-)NCBI
Rnor_6.0 Ensembl8110,376,954 - 110,813,000 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.08110,376,954 - 110,813,193 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.08109,782,848 - 110,218,328 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48106,871,856 - 107,328,156 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.18106,892,184 - 107,347,611 (-)NCBI
Celera8101,892,152 - 102,327,473 (-)NCBICelera
Cytogenetic Map8q32NCBI
Ephb1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555013,423,977 - 3,821,890 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555013,424,112 - 3,821,727 (-)NCBIChiLan1.0ChiLan1.0
EPHB1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.13139,312,933 - 139,778,166 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3139,313,387 - 139,776,802 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v03131,841,459 - 132,309,082 (+)NCBIMhudiblu_PPA_v0panPan3
EPHB1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl2331,485,534 - 31,917,393 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.12331,485,701 - 31,918,754 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Ephb1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049365298,006,780 - 8,261,923 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
EPHB1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1375,905,610 - 76,345,564 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11375,904,678 - 76,351,540 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21383,511,907 - 83,816,698 (+)NCBISscrofa10.2Sscrofa10.2susScr3
EPHB1
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11555,144,178 - 55,592,252 (-)NCBI
ChlSab1.1 Ensembl1555,143,630 - 55,589,862 (-)Ensembl
Ephb1
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473011,120,018 - 11,564,972 (+)NCBI

Position Markers
AW488255  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389101,922,571 - 101,922,711UniSTSGRCm38
MGSCv379101,824,901 - 101,825,041UniSTSGRCm37
Celera9101,458,771 - 101,458,911UniSTS
Cytogenetic Map9F1UniSTS
Whitehead/MRC_RH91037.33UniSTS
Ephb1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389101,922,503 - 101,923,030UniSTSGRCm38
MGSCv379101,824,833 - 101,825,360UniSTSGRCm37
Celera9101,458,703 - 101,459,231UniSTS
Cytogenetic Map9F1UniSTS
cM Map9 UniSTS
D9Mit358  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389102,138,467 - 102,138,583UniSTSGRCm38
MGSCv379102,040,797 - 102,040,913UniSTSGRCm37
Celera9101,686,822 - 101,686,942UniSTS
Cytogenetic Map9F1UniSTS
cM Map956.0UniSTS
Whitehead Genetic956.8UniSTS
Whitehead_YAC9 UniSTS
D9Mgc10  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389102,264,836 - 102,264,949UniSTSGRCm38
MGSCv379102,167,166 - 102,167,279UniSTSGRCm37
Celera9101,813,112 - 101,813,225UniSTS
Cytogenetic Map9F1UniSTS
cM Map956.0UniSTS
D9Mgc11  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389102,264,816 - 102,264,972UniSTSGRCm38
MGSCv379102,167,146 - 102,167,302UniSTSGRCm37
Celera9101,813,092 - 101,813,248UniSTS
Cytogenetic Map9F1UniSTS
cM Map956.0UniSTS
D9Mgc32  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389102,340,681 - 102,340,847UniSTSGRCm38
MGSCv379102,243,011 - 102,243,177UniSTSGRCm37
Celera9101,888,642 - 101,888,808UniSTS
Cytogenetic Map9F1UniSTS
cM Map956.0UniSTS
D9Mgc4  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389101,924,870 - 101,925,178UniSTSGRCm38
MGSCv379101,827,200 - 101,827,508UniSTSGRCm37
Celera9101,461,073 - 101,461,381UniSTS
Cytogenetic Map9F1UniSTS
cM Map956.0UniSTS
D9Mgc5  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389101,939,585 - 101,939,845UniSTSGRCm38
MGSCv379101,841,915 - 101,842,175UniSTSGRCm37
Celera9101,475,782 - 101,476,042UniSTS
Cytogenetic Map9F1UniSTS
cM Map956.0UniSTS
D9Mgc7  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389102,104,203 - 102,104,351UniSTSGRCm38
MGSCv379102,006,533 - 102,006,681UniSTSGRCm37
Celera9101,652,448 - 101,652,596UniSTS
Cytogenetic Map9F1UniSTS
cM Map956.0UniSTS
D9Mgc6  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389102,096,717 - 102,096,986UniSTSGRCm38
MGSCv379101,999,047 - 101,999,316UniSTSGRCm37
Celera9101,644,963 - 101,645,232UniSTS
Cytogenetic Map9F1UniSTS
cM Map956.0UniSTS
D9Mgc8  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389102,130,303 - 102,130,471UniSTSGRCm38
MGSCv379102,032,633 - 102,032,801UniSTSGRCm37
Celera9101,678,644 - 101,678,812UniSTS
Cytogenetic Map9F1UniSTS
cM Map956.0UniSTS
D9Mgc9  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389102,265,299 - 102,265,421UniSTSGRCm38
MGSCv379102,167,629 - 102,167,751UniSTSGRCm37
Celera9101,813,575 - 101,813,697UniSTS
Cytogenetic Map9F1UniSTS
cM Map956.0UniSTS
Ephb1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map9F1UniSTS
Ephb1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389101,923,182 - 101,923,411UniSTSGRCm38
MGSCv379101,825,512 - 101,825,741UniSTSGRCm37
Celera9101,459,383 - 101,459,612UniSTS
Cytogenetic Map9F1UniSTS
cM Map9 UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13207569Tcq13_mtotal cholesterol QTL 13 (mouse)959990000109260000Mouse
4141833W10q13_mweight 10 weeks QTL 13 (mouse)Not determined63332429120362868Mouse
4141545Tailaq2_mtail length adjusted QTL 2 (mouse)Not determined63332429120362868Mouse
1357635Splq4_mspleen weight QTL 4 (mouse)Not determined963332429120362868Mouse
1357610Vtbt8_mvertebral trabecular bone trait 8 (mouse)Not determined968897510102897652Mouse
1301924Bmd10_mbone mineral density 10 (mouse)Not determined968897510102897652Mouse
1301302Pas4_mpulmonary adenoma susceptibility 4 (mouse)Not determined969239845103239920Mouse
1301621Hpic1_mhaloperidol-induced catalepsy 1 (mouse)Not determined969546513103546645Mouse
1301573Etohcta8_methanol conditioned taste aversion 8 (mouse)Not determined972977005106977152Mouse
10054068El8_mepilepsy 8 (mouse)Not determined972977005106977152Mouse
1301725Lifespan1_mlife span 1 (mouse)Not determined974368177108368325Mouse
1302065El1_mepilepsy 1 (mouse)Not determined975775364114474379Mouse
10054492El7_mepilepsy 7 (mouse)Not determined975775364114474379Mouse
1301407Rapop2_mradiation-induced apoptosis 2 (mouse)Not determined976535936110536130Mouse
1301192Skts6_mskin tumor susceptibility 6 (mouse)Not determined978640645112640755Mouse
10401247Bglu14_mblood glucose level 14 (mouse)Not determined979397810113397888Mouse
1301732Char1_mP. chabaudi malaria resistance QTL 1 (mouse)Not determined981798268115798392Mouse
1300884Sluc11_msusceptibility to lung cancer 11 (mouse)Not determined982910333116910428Mouse
1357461Idd2_minsulin dependent diabetes susceptibility 2 (mouse)Not determined982910333116910428Mouse
10766454Char10_mP. chabaudi malaria resistance QTL 10 (mouse)982910333116910428Mouse
1301487Nociq1_mnociceptive sensitivity inflammatory QTL 1 (mouse)Not determined984528818118528921Mouse
10412180Msam3_mmuscle, skeletal, activity measure 3 (mouse)Not determined985897510108641186Mouse
1300549Bbaa17_mB. burgdorferi-associated arthritis 17 (mouse)Not determined986230401120230530Mouse
1302103Dob2_mdietary obesity 2 (mouse)Not determined986239845120289624Mouse
11251716Siim2_mstress induced immobility 2 (mouse)986748483120748483Mouse
12880422V25Dq6_mvitamin D inactive form serum level QTL 6 (mouse)987800000121800000Mouse
10412242Alpq8_malcohol preference QTL 8 (mouse)Not determined989284925123284925Mouse
1301649Psl1_mpromotion susceptibility QTL 1 (mouse)Not determined989412277123412396Mouse
18182932Metl3_mmetabolite locus 3, N-acetylglutamate (mouse)989563342123563342Mouse
1357657Pymr_mPlasmodium yoelli malaria resistance (mouse)Not determined989977005118938021Mouse
12910770Splic1_mspleen iron content 1 (mouse)991413879124595110Mouse
12910772Lvic6_mliver iron content 6 (mouse)991413879124595110Mouse
12910773Splic3_mspleen iron content 3 (mouse)991413879124595110Mouse
1558767Skmw11_mskeletal muscle weight 11 (mouse)Not determined991641084124595110Mouse
13463474Hbbcq5_mhemoglobin concentration QTL 5 (mouse)991641084124595110Mouse
13463475Hctq7_mhematocrit QTL 7 (mouse)991641084124595110Mouse
13463477Rbc9_mred blood cell count 9 (mouse)991641084124595110Mouse
13463478Mchq18_mmean corpuscular hemoglobin QTL 18 (mouse)991641084124595110Mouse
13463480Mchcq2_mmean corpuscular hemoglobin concentration QTL 2 (mouse)991641084124595110Mouse
12904937Edlmmq9_mextensor digitorum longus muscle mass QTL 9 (mouse)991683173124595110Mouse
12904947Tammq7_mtibialis anterior muscle mass QTL 7 (mouse)991683173124595110Mouse
12904961Gmmq7_mgastrocnemius muscle mass QTL 7 (mouse)991683173124595110Mouse
1302001Bdln5_mbody length 5 (mouse)Not determined993762590124595110Mouse
1301484Bwq6_mbody weight (mouse)Not determined993762590124595110Mouse
14746992Manh67_mmandible shape 67 (mouse)994036768124595110Mouse
11081166Psl5_mpromotion susceptibility QTL 5 (mouse)994981301112872929Mouse
11537364Cnes5_mC. neoformans susceptibility locus 5 (mouse)996917590124595110Mouse
1301297Lcho1_mliver cholesterol 1 (mouse)Not determined9101060861124595110Mouse
1357627Tgq2_mtriglyceride QTL 2 (mouse)Not determined9102000187124595110Mouse
1357648Obq18_mobesity QTL 18 (mouse)Not determined9102000187124595110Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1170
Count of miRNA genes:461
Interacting mature miRNAs:550
Transcripts:ENSMUST00000035129, ENSMUST00000085169, ENSMUST00000149800
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000035129   ⟹   ENSMUSP00000035129
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9101,922,128 - 102,354,693 (-)Ensembl
RefSeq Acc Id: ENSMUST00000085169   ⟹   ENSMUSP00000082261
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9101,922,571 - 102,354,693 (-)Ensembl
RefSeq Acc Id: ENSMUST00000149800   ⟹   ENSMUSP00000139470
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9102,039,192 - 102,354,693 (-)Ensembl
RefSeq Acc Id: ENSMUST00000215514
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9101,922,961 - 101,940,567 (-)Ensembl
RefSeq Acc Id: ENSMUST00000217014
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9101,922,959 - 101,940,899 (-)Ensembl
RefSeq Acc Id: ENSMUST00000217184
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9101,922,959 - 101,940,899 (-)Ensembl
RefSeq Acc Id: NM_001168296   ⟹   NP_001161768
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399101,799,327 - 102,231,892 (-)NCBI
GRCm389101,922,128 - 102,354,693 (-)ENTREZGENE
MGSCv379101,824,458 - 102,257,023 (-)RGD
Celera9101,458,328 - 101,902,746 (-)RGD
cM Map9 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_173447   ⟹   NP_775623
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399101,799,327 - 102,231,892 (-)NCBI
GRCm389101,922,128 - 102,354,693 (-)ENTREZGENE
MGSCv379101,824,458 - 102,257,023 (-)RGD
Celera9101,458,328 - 101,902,746 (-)RGD
cM Map9 ENTREZGENE
Sequence:
Reference Sequences
RefSeq Acc Id: NP_775623   ⟸   NM_173447
- Peptide Label: isoform 1 precursor
- UniProtKB: Q8CBF3 (UniProtKB/Swiss-Prot),   Q8CA63 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001161768   ⟸   NM_001168296
- Peptide Label: isoform 2 precursor
- UniProtKB: Q8CBF3 (UniProtKB/Swiss-Prot),   Q8CA63 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000082261   ⟸   ENSMUST00000085169
RefSeq Acc Id: ENSMUSP00000035129   ⟸   ENSMUST00000035129
RefSeq Acc Id: ENSMUSP00000139470   ⟸   ENSMUST00000149800
Protein Domains
Eph LBD   Fibronectin type-III   Protein kinase   SAM

Promoters
RGD ID:6844504
Promoter ID:MM_KWN:58553
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Lung
Transcripts:NM_001168296,   OTTMUST00000049888,   OTTMUST00000049890
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv369102,256,679 - 102,257,179 (-)MPROMDB
RGD ID:8670606
Promoter ID:EPDNEW_M13334
Type:initiation region
Name:Ephb1_1
Description:Mus musculus Eph receptor B1 , transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm389102,354,692 - 102,354,752EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1096337 AgrOrtholog
Ensembl Genes ENSMUSG00000032537 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000035129 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000082261 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000139470 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000035129 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000085169 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000149800 UniProtKB/TrEMBL
Gene3D-CATH 1.10.150.50 UniProtKB/Swiss-Prot
  2.60.120.260 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.60.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Eph_TM UniProtKB/Swiss-Prot
  EphB1_rcpt_lig-bd UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  EphB1_SAM UniProtKB/Swiss-Prot
  Ephrin_rcpt_lig-bd_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FN3_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FN3_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Galactose-bd-like_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Growth_fac_rcpt_cys_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Kinase-like_dom_sf UniProtKB/Swiss-Prot
  Prot_kinase_dom UniProtKB/Swiss-Prot
  Protein_kinase_ATP_BS UniProtKB/Swiss-Prot
  SAM UniProtKB/Swiss-Prot
  SAM/pointed_sf UniProtKB/Swiss-Prot
  Ser-Thr/Tyr_kinase_cat_dom UniProtKB/Swiss-Prot
  Tyr-kin_ephrin_A/B_rcpt-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Tyr_kinase_AS UniProtKB/Swiss-Prot
  Tyr_kinase_cat_dom UniProtKB/Swiss-Prot
  Tyr_kinase_ephrin_rcpt UniProtKB/Swiss-Prot
  Tyr_kinase_rcpt_V_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:270190 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1096337 ENTREZGENE
NCBI Gene 270190 ENTREZGENE
Pfam EphA2_TM UniProtKB/Swiss-Prot
  Ephrin_lbd UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  fn3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Pkinase_Tyr UniProtKB/Swiss-Prot
  SAM_1 UniProtKB/Swiss-Prot
PhenoGen Ephb1 PhenoGen
PIRSF TyrPK_ephrin_receptor UniProtKB/Swiss-Prot
PRINTS TYRKINASE UniProtKB/Swiss-Prot
PROSITE EGF_2 UniProtKB/Swiss-Prot
  EPH_LBD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FN3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN_KINASE_ATP UniProtKB/Swiss-Prot
  PROTEIN_KINASE_DOM UniProtKB/Swiss-Prot
  PROTEIN_KINASE_TYR UniProtKB/Swiss-Prot
  RECEPTOR_TYR_KIN_V_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RECEPTOR_TYR_KIN_V_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SAM_DOMAIN UniProtKB/Swiss-Prot
SMART EPH_lbd UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ephrin_rec_like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FN3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SAM UniProtKB/Swiss-Prot
  TyrKc UniProtKB/Swiss-Prot
Superfamily-SCOP SSF47769 UniProtKB/Swiss-Prot
  SSF49265 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF49785 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF56112 UniProtKB/Swiss-Prot
  SSF57184 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt EPHB1_MOUSE UniProtKB/Swiss-Prot
  Q8C4I9_MOUSE UniProtKB/TrEMBL
  Q8CA63 ENTREZGENE, UniProtKB/TrEMBL
  Q8CBF3 ENTREZGENE
UniProt Secondary B1B1C2 UniProtKB/Swiss-Prot
  Q3UY27 UniProtKB/Swiss-Prot
  Q6PG23 UniProtKB/Swiss-Prot
  Q8CBE2 UniProtKB/Swiss-Prot