Cacna1a (calcium channel, voltage-dependent, P/Q type, alpha 1A subunit) - Rat Genome Database

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Gene: Cacna1a (calcium channel, voltage-dependent, P/Q type, alpha 1A subunit) Mus musculus
Analyze
Symbol: Cacna1a
Name: calcium channel, voltage-dependent, P/Q type, alpha 1A subunit
RGD ID: 10265
MGI Page MGI
Description: Enables high voltage-gated calcium channel activity and voltage-gated calcium channel activity involved in regulation of presynaptic cytosolic calcium levels. Acts upstream of or within several processes, including cellular ion homeostasis; chemical synaptic transmission; and nervous system development. Located in dendrite and neuronal cell body. Part of voltage-gated calcium channel complex. Is active in glutamatergic synapse. Is expressed in several structures, including central nervous system; dorsal root ganglion; heart; and trigeminal nerve. Used to study Lambert-Eaton myasthenic syndrome; brain disease (multiple); and episodic ataxia type 2. Human ortholog(s) of this gene implicated in developmental and epileptic encephalopathy 42; hereditary ataxia (multiple); and migraine (multiple). Orthologous to human CACNA1A (calcium voltage-gated channel subunit alpha1 A); PARTICIPATES IN alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; buprenorphine pharmacodynamics pathway; INTERACTS WITH (+)-pilocarpine; 1,2-dimethylhydrazine; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: al; alpha1A; APCA; BI; brain calcium channel I; Caca1a; Cacn; Cacnl1a4; calcium channel, L type, alpha-1 polypeptide; calcium channel, P/Q type, alpha 1A; Cav2.1; Ccha; Ccha1a; EA2; FHM; HPCA; la; leaner; MHP; MHP1; nmf35; nmf352; P/Q-type calcium channel alpha1A subunit; rkr; rocker; s; SC; SCA6; smrl; tg; tottering; voltage-dependent P/Q-type calcium channel subunit alpha-1A; voltage-gated calcium channel subunit alpha Cav2.1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39885,065,257 - 85,366,880 (+)NCBIGRCm39mm39
GRCm39 Ensembl885,065,268 - 85,366,875 (+)Ensembl
GRCm38884,338,631 - 84,640,251 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl884,338,639 - 84,640,246 (+)EnsemblGRCm38mm10GRCm38
MGSCv37886,939,263 - 87,164,148 (+)NCBIGRCm37mm9NCBIm37
MGSCv36887,305,469 - 87,530,351 (+)NCBImm8
Celera888,715,985 - 88,942,662 (+)NCBICelera
Cytogenetic Map8C2- C3NCBI
cM Map840.95NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-pilocarpine  (EXP)
1,2-dimethylhydrazine  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP)
3,3',5,5'-tetrabromobisphenol A  (EXP)
4-hydroxynon-2-enal  (EXP)
6-propyl-2-thiouracil  (ISO)
acrylamide  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (EXP,ISO)
allethrin  (ISO)
ammonium chloride  (ISO)
antirheumatic drug  (ISO)
arsenous acid  (EXP)
aspartame  (EXP)
barium(0)  (ISO)
benzo[a]pyrene  (EXP,ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (ISO)
bisphenol F  (ISO)
Butylparaben  (ISO)
calcium atom  (ISO)
calcium(0)  (ISO)
cannabidiol  (ISO)
carbamazepine  (ISO)
choline  (EXP)
cisplatin  (EXP)
clofibrate  (EXP)
clozapine  (EXP,ISO)
copper atom  (ISO)
copper(0)  (ISO)
DDE  (ISO)
diarsenic trioxide  (EXP)
dibutyl phthalate  (EXP,ISO)
dichlorine  (ISO)
dorsomorphin  (ISO)
entinostat  (ISO)
enzacamene  (ISO)
epoxiconazole  (ISO)
ethanol  (EXP)
fenvalerate  (ISO)
folic acid  (EXP)
gabapentin  (EXP,ISO)
gamma-aminobutyric acid  (ISO)
haloperidol  (EXP,ISO)
L-methionine  (EXP)
linuron  (ISO)
methotrexate  (ISO)
methoxychlor  (ISO)
monosodium L-glutamate  (EXP)
N,N-diethyl-m-toluamide  (ISO)
N-ethyl-N-nitrosourea  (EXP)
N-nitrosodiethylamine  (ISO)
nitric oxide  (ISO)
Nor-9-carboxy-delta9-THC  (ISO)
ozone  (ISO)
perfluorooctane-1-sulfonic acid  (EXP)
permethrin  (ISO)
phenethyl caffeate  (ISO)
phenylmercury acetate  (ISO)
pirinixic acid  (EXP)
potassium chloride  (EXP,ISO)
prochloraz  (ISO)
procymidone  (ISO)
rotenone  (ISO)
SB 431542  (ISO)
silver atom  (ISO)
silver(0)  (ISO)
sodium arsenite  (ISO)
succimer  (ISO)
temozolomide  (ISO)
Testosterone propionate  (EXP)
tetrachloromethane  (ISO)
thapsigargin  (ISO)
trichostatin A  (ISO)
triclosan  (ISO)
triptonide  (EXP)
valproic acid  (ISO)
vinclozolin  (ISO)
vorinostat  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
adult walking behavior  (IGI,IMP)
behavioral response to pain  (IMP)
calcium ion import  (IBA,ISO)
calcium ion transmembrane transport  (IBA,ISO)
calcium ion transport  (IBA,IMP,ISO)
calcium ion-regulated exocytosis of neurotransmitter  (IMP)
calcium-ion regulated exocytosis  (IMP)
cell death  (ISO)
cellular chloride ion homeostasis  (IMP)
cellular response to amyloid-beta  (ISO)
central nervous system neuron differentiation  (IMP)
cerebellar molecular layer development  (IMP)
cerebellar Purkinje cell differentiation  (IMP)
cerebellar Purkinje cell layer development  (IMP)
cerebellum maturation  (IMP)
chemical synaptic transmission  (IBA,IMP,ISO)
dendrite morphogenesis  (IMP)
gamma-aminobutyric acid secretion  (IMP)
gamma-aminobutyric acid signaling pathway  (IMP)
glucose homeostasis  (IMP)
ion transport  (IEA)
membrane depolarization  (IMP)
modulation of chemical synaptic transmission  (ISO)
musculoskeletal movement, spinal reflex action  (IMP)
negative regulation of hormone biosynthetic process  (IMP)
negative regulation of neuron apoptotic process  (IMP)
nervous system process  (IMP)
neuromuscular process  (IGI,IMP)
neuromuscular process controlling balance  (IMP)
neuromuscular synaptic transmission  (IMP)
neuron-neuron synaptic transmission  (IMP)
positive regulation of cytosolic calcium ion concentration  (IDA,ISO)
receptor clustering  (IMP)
regulation of acetylcholine secretion, neurotransmission  (IMP)
regulation of axonogenesis  (IMP)
regulation of calcium ion-dependent exocytosis  (IDA)
regulation of hormone levels  (IMP)
regulation of ion transmembrane transport  (IEA)
regulation of membrane potential  (IMP)
regulation of neurotransmitter levels  (IMP)
regulation of sulfur amino acid metabolic process  (IMP)
regulation of voltage-gated calcium channel activity  (ISO)
response to amyloid-beta  (ISO)
response to pain  (IMP)
rhythmic synaptic transmission  (IMP)
sensory perception of pain  (ISO)
spinal cord motor neuron differentiation  (IMP)
synapse assembly  (IMP)
synaptic transmission, GABAergic  (IMP)
synaptic transmission, glutamatergic  (IMP)
transmembrane transport  (IEA)
transmission of nerve impulse  (IMP)
vestibular nucleus development  (IMP)

Molecular Pathway Annotations     Click to see Annotation Detail View
alfentanil pharmacodynamics pathway  (ISO)
bupivacaine pharmacodynamics pathway  (ISO)
buprenorphine pharmacodynamics pathway  (ISO)
calcium transport pathway  (ISO)
calcium/calcium-mediated signaling pathway  (ISO)
chloroprocaine pharmacodynamics pathway  (ISO)
citalopram pharmacodynamics pathway  (ISO)
cocaine pharmacodynamics pathway  (ISO)
codeine and morphine pharmacodynamics pathway  (ISO)
desipramine pharmacodynamics pathway  (ISO)
diphenoxylate pharmacodynamics pathway  (ISO)
escitalopram pharmacodynamics pathway  (ISO)
ethylmorphine pharmacodynamics pathway  (ISO)
fentanyl pharmacodynamics pathway  (ISO)
fluoxetine pharmacodynamics pathway  (ISO)
gliclazide pharmacodynamics pathway  (ISO)
glutamate signaling pathway  (IEA)
glyburide pharmacodynamics pathway  (ISO)
heroin pharmacodynamics pathway  (ISO)
hydrocodone pharmacodynamics pathway  (ISO)
hydromorphone pharmacodynamics pathway  (ISO)
imipramine pharmacodynamics pathway  (ISO)
insulin secretion pathway  (TAS)
levacetylmethadol pharmacodynamics pathway  (ISO)
levobupivacaine phgarmacodynamics pathway  (ISO)
levorphanol pharmacodynamics pathway  (ISO)
lidocaine pharmacodynamics pathway  (ISO)
long term depression  (IEA)
mepivacaine pharmacodynamics pathway  (ISO)
methadone pharmacodynamics pathway  (ISO)
mitogen activated protein kinase signaling pathway  (IEA)
nalbuphine pharmacodynamics pathway  (ISO)
naloxone pharmacodynamics pathway  (ISO)
naltrexone pharmacodynamics pathway  (ISO)
nicotine pharmacodynamics pathway  (ISO)
oxybuprocaine pharmacodynamics pathway  (ISO)
oxycodone pharmacodynamics pathway  (ISO)
oxymorphone pharmacodynamics pathway  (ISO)
pentazocine pharmacodynamics pathway  (ISO)
potassium channel inhibitors pharmacodynamics pathway  (ISO)
prilocaine pharmacodynamics pathway  (ISO)
procaine pharmacodynamics pathway  (ISO)
remifentanil pharmacodynamics pathway  (ISO)
ropivacaine pharmacodynamics pathway  (ISO)
tramadol pharmacodynamics pathway  (ISO)
type 2 diabetes mellitus pathway  (IEA)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal action potential  (IAGP)
abnormal axon morphology  (IAGP)
abnormal brain interneuron morphology  (IAGP)
abnormal brain morphology  (IAGP)
abnormal brain wave pattern  (IAGP)
abnormal brainstem morphology  (IAGP)
abnormal cerebellar granule cell morphology  (IAGP)
abnormal cerebellar molecular layer  (IAGP)
abnormal cerebellum external granule cell layer morphology  (IAGP)
abnormal cerebellum morphology  (IAGP)
abnormal channel response  (IAGP)
abnormal CNS synaptic transmission  (IAGP)
abnormal excitatory postsynaptic current amplitude  (IAGP)
abnormal excitatory postsynaptic currents  (IAGP)
abnormal excitatory postsynaptic potential  (IAGP)
abnormal gait  (IAGP)
abnormal glucose homeostasis  (IAGP)
abnormal inhibitory postsynaptic currents  (IAGP)
abnormal locomotor behavior  (IEA)
abnormal locomotor coordination  (IAGP)
abnormal maternal nurturing  (IAGP)
abnormal metabolism  (IAGP)
abnormal miniature endplate potential  (IAGP)
abnormal miniature excitatory postsynaptic currents  (IAGP)
abnormal motor capabilities/coordination/movement  (IAGP)
abnormal motor coordination/balance  (IAGP)
abnormal muscle electrophysiology  (IAGP)
abnormal nerve fiber response  (IAGP)
abnormal nervous system electrophysiology  (IAGP)
abnormal nervous system morphology  (IEA)
abnormal nervous system physiology  (IAGP)
abnormal neuron morphology  (IAGP)
abnormal nursing  (IAGP)
abnormal paired-pulse inhibition  (IAGP)
abnormal physiological response to xenobiotic  (IAGP)
abnormal PNS synaptic transmission  (IAGP)
abnormal postnatal growth/weight/body size  (IAGP)
abnormal posture  (IAGP)
abnormal Purkinje cell dendrite morphology  (IAGP)
abnormal Purkinje cell innervation  (IAGP)
abnormal Purkinje cell morphology  (IAGP)
abnormal response/metabolism to endogenous compounds  (IAGP)
abnormal seizure response to inducing agent  (IAGP)
abnormal somatosensory cortex physiology  (IAGP)
abnormal spike wave discharge  (IAGP)
abnormal spleen red pulp morphology  (IEA)
abnormal survival  (IEA)
abnormal synapse morphology  (IAGP)
abnormal synaptic acetylcholine release  (IAGP)
abnormal synaptic transmission  (IAGP)
absence seizures  (IAGP)
ataxia  (IAGP)
cerebellum atrophy  (IAGP)
cerebellum hypoplasia  (IEA)
circling  (IAGP)
clonic seizures  (IAGP)
decreased body size  (IAGP)
decreased body weight  (IAGP)
decreased bone marrow cell number  (IEA)
decreased choline O-acetyltransferase activity  (IAGP)
decreased excitatory postsynaptic current amplitude  (IAGP)
decreased glutamic acid level  (IAGP)
decreased grip strength  (IAGP)
decreased litter size  (IEA)
decreased nerve fiber response intensity  (IAGP)
decreased neurotransmitter release  (IAGP)
decreased Purkinje cell number  (IAGP)
decreased survivor rate  (IEA)
decreased thermal nociceptive threshold  (IAGP)
decreased vertical activity  (IAGP)
disheveled coat  (IAGP)
dystonia  (IAGP)
enhanced behavioral response to xenobiotic  (IAGP)
enhanced paired-pulse facilitation  (IAGP)
environmentally induced seizures  (IAGP)
hemiplegia  (IAGP)
hypoactivity  (IAGP)
hyporesponsive to tactile stimuli  (IAGP)
impaired balance  (IAGP)
impaired coordination  (IAGP)
impaired limb coordination  (IAGP)
impaired righting response  (IAGP)
impaired swimming  (IAGP)
increased apoptosis  (IAGP)
increased brain tyrosine 3-monooxygenase activity  (IAGP)
increased cerebellar granule cell number  (IAGP)
increased cerebral infarct size  (IAGP)
increased excitatory postsynaptic current amplitude  (IAGP)
increased glycine level  (IAGP)
increased neurotransmitter release  (IAGP)
increased noradrenaline level  (IAGP)
increased sensitivity to induced morbidity/mortality  (IAGP)
increased sensitivity to xenobiotic induced morbidity/mortality  (IAGP)
increased susceptibility to ischemic brain injury  (IAGP)
increased susceptibility to pharmacologically induced seizures  (IAGP)
increased taurine level  (IAGP)
infertility  (IAGP)
lethality at weaning, complete penetrance  (IAGP)
limb grasping  (IEA)
muscle spasm  (IAGP)
muscle weakness  (IAGP)
neonatal lethality, incomplete penetrance  (IEA)
no abnormal phenotype detected  (IAGP)
perinatal lethality, incomplete penetrance  (IEA)
postnatal lethality, complete penetrance  (IAGP)
premature death  (IAGP)
preweaning lethality, complete penetrance  (IAGP)
preweaning lethality, incomplete penetrance  (IAGP)
Purkinje cell degeneration  (IAGP)
reduced female fertility  (IAGP)
reduced fertility  (IAGP)
reduced male fertility  (IAGP)
respiratory failure  (IAGP)
seizures  (IAGP)
short stride length  (IAGP)
small cerebellum  (IAGP)
sporadic seizures  (IAGP)
thin cerebellar granule layer  (IAGP)
thin cerebellar molecular layer  (IAGP)
thymus atrophy  (IEA)
tremors  (IAGP)
weakness  (IAGP)
References

Additional References at PubMed
PMID:572084   PMID:1279353   PMID:1306163   PMID:1355109   PMID:1469420   PMID:1485534   PMID:1486501   PMID:1512593   PMID:1572065   PMID:1670919   PMID:1686215   PMID:2271967  
PMID:2897649   PMID:2901364   PMID:3699253   PMID:4799944   PMID:4933322   PMID:4941467   PMID:5365621   PMID:5799428   PMID:6123371   PMID:6167317   PMID:6462226   PMID:6811784  
PMID:6945603   PMID:7145091   PMID:7581164   PMID:7697385   PMID:7834360   PMID:7845610   PMID:8077211   PMID:8100981   PMID:8158221   PMID:8220421   PMID:8229069   PMID:8331216  
PMID:8380766   PMID:8500431   PMID:8551348   PMID:8565963   PMID:8632762   PMID:8666294   PMID:8719615   PMID:8719807   PMID:8738138   PMID:8861630   PMID:8889548   PMID:8910533  
PMID:8929530   PMID:8957685   PMID:9013814   PMID:9191109   PMID:9345107   PMID:9433681   PMID:9514513   PMID:9562526   PMID:9614225   PMID:9639271   PMID:9680377   PMID:9723790  
PMID:9729301   PMID:9735950   PMID:9742139   PMID:9857013   PMID:9882694   PMID:10218773   PMID:10322048   PMID:10328888   PMID:10336181   PMID:10349636   PMID:10350535   PMID:10381343  
PMID:10395577   PMID:10446746   PMID:10469844   PMID:10515158   PMID:10515159   PMID:10611370   PMID:10627593   PMID:10630211   PMID:10670432   PMID:10686170   PMID:10860780   PMID:10899223  
PMID:10908603   PMID:10958785   PMID:11042159   PMID:11076861   PMID:11160387   PMID:11166370   PMID:11182254   PMID:11217851   PMID:11296258   PMID:11344116   PMID:11700294   PMID:11718712  
PMID:11742722   PMID:11756409   PMID:11860502   PMID:12023053   PMID:12040045   PMID:12065603   PMID:12150506   PMID:12151514   PMID:12372549   PMID:12401561   PMID:12466851   PMID:12562906  
PMID:12624181   PMID:12666195   PMID:12710975   PMID:12827191   PMID:12834873   PMID:13950100   PMID:14559153   PMID:14572439   PMID:14592860   PMID:14610273   PMID:14667443   PMID:14724264  
PMID:14767162   PMID:14973254   PMID:14990796   PMID:15003170   PMID:15050706   PMID:15090043   PMID:15175394   PMID:15175395   PMID:15370195   PMID:15451373   PMID:15514988   PMID:15548652  
PMID:15577901   PMID:15743764   PMID:15797555   PMID:15827027   PMID:15843617   PMID:15917267   PMID:16111830   PMID:16141072   PMID:16141073   PMID:16144305   PMID:16242631   PMID:16256961  
PMID:16327158   PMID:16359645   PMID:16364258   PMID:16381801   PMID:16386251   PMID:16472880   PMID:16474392   PMID:16540584   PMID:16602821   PMID:16787652   PMID:16890369   PMID:16914686  
PMID:16928863   PMID:16985003   PMID:16987237   PMID:17005620   PMID:17114649   PMID:17146767   PMID:17156092   PMID:17156361   PMID:17161543   PMID:17188510   PMID:17291689   PMID:17376154  
PMID:17439489   PMID:17478533   PMID:17513018   PMID:17823210   PMID:17927665   PMID:17968008   PMID:17982453   PMID:18001290   PMID:18023294   PMID:18093175   PMID:18293354   PMID:18313230  
PMID:18367436   PMID:18597946   PMID:18653245   PMID:18669535   PMID:18687887   PMID:18799693   PMID:18825664   PMID:18982062   PMID:19005038   PMID:19073246   PMID:19104150   PMID:19248821  
PMID:19285472   PMID:19345443   PMID:19351589   PMID:19422811   PMID:19446536   PMID:19467269   PMID:19484318   PMID:19609731   PMID:19850086   PMID:19854154   PMID:19966779   PMID:20092572  
PMID:20186955   PMID:20188150   PMID:20194127   PMID:20204399   PMID:20420856   PMID:20462503   PMID:20547676   PMID:20562017   PMID:20570694   PMID:20670620   PMID:20735819   PMID:20845003  
PMID:20937883   PMID:21150292   PMID:21228161   PMID:21267068   PMID:21411672   PMID:21440913   PMID:21490217   PMID:21628556   PMID:21718757   PMID:21870131   PMID:21873635   PMID:21884752  
PMID:22005682   PMID:22107844   PMID:22144569   PMID:22279211   PMID:22279216   PMID:22534482   PMID:22575052   PMID:22850483   PMID:22952933   PMID:22956801   PMID:23054835   PMID:23115190  
PMID:23326332   PMID:23338940   PMID:23382986   PMID:23426690   PMID:23426693   PMID:23451282   PMID:23516282   PMID:23545255   PMID:23577145   PMID:23583179   PMID:23595603   PMID:23673147  
PMID:23827678   PMID:23904597   PMID:23948231   PMID:23985897   PMID:24041537   PMID:24177210   PMID:24205277   PMID:24225482   PMID:24355314   PMID:24394417   PMID:24411734   PMID:24453333  
PMID:24523520   PMID:24583041   PMID:24758835   PMID:24768804   PMID:24843004   PMID:24849341   PMID:24849348   PMID:24882000   PMID:24907493   PMID:24947601   PMID:24952961   PMID:25109669  
PMID:25143538   PMID:25150573   PMID:25447936   PMID:25481823   PMID:25716839   PMID:25741235   PMID:25791619   PMID:25798587   PMID:25811491   PMID:25843032   PMID:25855180   PMID:25892515  
PMID:25907855   PMID:25917818   PMID:25979088   PMID:26002462   PMID:26032020   PMID:26034136   PMID:26063920   PMID:26208839   PMID:26283199   PMID:26616403   PMID:26730403   PMID:26755585  
PMID:26755594   PMID:26758833   PMID:26796036   PMID:26887908   PMID:27346147   PMID:27381005   PMID:27586650   PMID:27799552   PMID:27805050   PMID:27840189   PMID:27857685   PMID:28363781  
PMID:28377503   PMID:28386022   PMID:28430869   PMID:28510727   PMID:28671696   PMID:28688851   PMID:28786379   PMID:29166599   PMID:29466725   PMID:29654190   PMID:29659809   PMID:29996090  
PMID:30279196   PMID:30545599   PMID:30649209   PMID:30786075   PMID:30811980   PMID:30922876   PMID:31040226   PMID:31253182   PMID:31299346   PMID:31337678   PMID:31477143   PMID:31628185  
PMID:31645463   PMID:31800012   PMID:32027825   PMID:32325033   PMID:32616470   PMID:33255506  


Genomics

Comparative Map Data
Cacna1a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39885,065,257 - 85,366,880 (+)NCBIGRCm39mm39
GRCm39 Ensembl885,065,268 - 85,366,875 (+)Ensembl
GRCm38884,338,631 - 84,640,251 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl884,338,639 - 84,640,246 (+)EnsemblGRCm38mm10GRCm38
MGSCv37886,939,263 - 87,164,148 (+)NCBIGRCm37mm9NCBIm37
MGSCv36887,305,469 - 87,530,351 (+)NCBImm8
Celera888,715,985 - 88,942,662 (+)NCBICelera
Cytogenetic Map8C2- C3NCBI
cM Map840.95NCBI
CACNA1A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1913,206,442 - 13,633,025 (-)EnsemblGRCh38hg38GRCh38
GRCh381913,206,442 - 13,506,479 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371913,317,256 - 13,617,293 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361913,178,256 - 13,478,274 (-)NCBINCBI36hg18NCBI36
Build 341913,179,114 - 13,478,317NCBI
Celera1913,207,639 - 13,507,772 (-)NCBI
Cytogenetic Map19p13.13NCBI
HuRef1912,889,634 - 13,189,171 (-)NCBIHuRef
CHM1_11913,318,256 - 13,618,198 (-)NCBICHM1_1
Cacna1a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21923,520,741 - 23,819,971 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl1923,520,741 - 23,823,225 (-)Ensembl
Rnor_6.01925,453,236 - 25,749,550 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1925,526,751 - 25,749,550 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01936,502,533 - 36,727,039 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41925,188,170 - 25,424,495 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11925,194,294 - 25,429,321 (-)NCBI
Celera1923,074,249 - 23,295,970 (-)NCBICelera
Cytogenetic Map19q11NCBI
Cacna1a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541532,183,442 - 32,400,595 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541532,182,536 - 32,457,511 (-)NCBIChiLan1.0ChiLan1.0
CACNA1A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11913,506,232 - 13,804,815 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1913,507,102 - 13,804,729 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01912,769,586 - 13,189,022 (-)NCBIMhudiblu_PPA_v0panPan3
CACNA1A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12048,747,087 - 49,036,627 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2048,821,025 - 49,036,032 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2048,694,916 - 48,910,172 (+)NCBI
ROS_Cfam_1.02049,339,396 - 49,554,755 (+)NCBI
UMICH_Zoey_3.12048,549,923 - 48,765,101 (+)NCBI
UNSW_CanFamBas_1.02048,976,279 - 49,191,383 (+)NCBI
UU_Cfam_GSD_1.02049,219,720 - 49,435,029 (+)NCBI
LOC101960999
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118208,078,478 - 208,143,320 (+)NCBI
SpeTri2.0NW_0049366592,201,606 - 2,269,625 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CACNA1A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1265,491,784 - 65,871,068 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2265,921,411 - 66,176,189 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CACNA1A
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1611,883,353 - 12,307,023 (-)NCBI
Vero_WHO_p1.0NW_0236660747,403,914 - 7,900,327 (+)NCBI
Cacna1a
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624901707,322 - 932,658 (-)NCBI

Position Markers
RH143033  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38884,414,921 - 84,415,063UniSTSGRCm38
MGSCv37886,938,820 - 86,938,962UniSTSGRCm37
Celera888,715,542 - 88,715,684UniSTS
Cytogenetic Map8C3UniSTS
cM Map838.5UniSTS
UniSTS:224230  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38884,415,038 - 84,415,112UniSTSGRCm38
MGSCv37886,938,937 - 86,939,011UniSTSGRCm37
Celera888,715,659 - 88,715,733UniSTS
Cytogenetic Map8C3UniSTS
cM Map838.5UniSTS
Cacna1a  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38884,633,282 - 84,633,663UniSTSGRCm38
MGSCv37887,157,181 - 87,157,562UniSTSGRCm37
Celera888,935,547 - 88,935,921UniSTS
Cytogenetic Map8C3UniSTS
cM Map838.5UniSTS
Cacna1a  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38884,550,297 - 84,550,524UniSTSGRCm38
MGSCv37887,074,196 - 87,074,423UniSTSGRCm37
Celera888,852,636 - 88,852,863UniSTS
Cytogenetic Map8C3UniSTS
cM Map838.5UniSTS
Cacna1a  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38884,633,421 - 84,633,715UniSTSGRCm38
MGSCv37887,157,320 - 87,157,614UniSTSGRCm37
Celera888,935,679 - 88,935,973UniSTS
Cytogenetic Map8C3UniSTS
cM Map838.5UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4140967Bmd39_mbone mineral density 39 (mouse)Not determined832016544117238700Mouse
1558875Eae31_mexperimental allergic encephalomyelitis susceptibility 31 (mouse)Not determined834642776114837007Mouse
1301013Capsq4_mcapsaicin sensitivity related QTL 4 (mouse)Not determined83616300092728652Mouse
27226754Femd6_mfemur midshaft diameter 6, 10 week (mouse)837400000109600000Mouse
12904744Carcdq1_mcardiac collagen deposition QTL 1 (mouse)83970925694689598Mouse
14700686Civq3_mcerebral infarct volume QTL 3 (mouse)85188219185882191Mouse
1301506Aevm1_mautoimmune extremity vasculitis in MRL mice 1 (mouse)Not determined85428781788287993Mouse
1301952Im3_mimmunoregulatory 3 (mouse)Not determined85470661488706763Mouse
10412287Carg3_mCandida albicans resistance gene 3 (mouse)Not determined85554502889545028Mouse
11353828Gf7_mgonadal fat pad weight 7 (mouse)85820147992201479Mouse
10043975Obq31_mobesity QTL 31 (mouse)Not determined85840977692409776Mouse
1301688Orch6_mautoimmune orchitis resistance 6 (mouse)Not determined86078685094786976Mouse
4141285Tgq18_mtriglyceride QTL 18 (mouse)Not determined6346010797460107Mouse
4141797Skmw16_mskeletal muscle weight 16 (mouse)Not determined86393954797939696Mouse
1357787Vtbt5_mvertebral trabecular bone trait 5 (mouse)Not determined86535776899357920Mouse
10043992Hbnr11_mHeligmosomoides bakeri nematode resistance 11 (mouse)Not determined86560020799600347Mouse
1301767Fcsa2_mfemoral cross-sectional area 2 (mouse)Not determined870305375104305495Mouse
4142283Imraq2_mimmune response to AAV2 QTL 2 (mouse)Not determined870305375104305495Mouse
1558780Idd22_minsulin dependent diabetes susceptibility 22 (mouse)Not determined871102903105103009Mouse
4141395Char2a_mP. chabaudi malaria resistance QTL 2a (mouse)Not determined7113678390202598Mouse
4142023W3q5_mweight 3 weeks QTL 5 (mouse)Not determined71287817123895615Mouse
1357708Orq1_movulation rate QTL 1 (mouse)Not determined871287817123895615Mouse
1301872Cd4ts3_mCD4 T cell subset 3 (mouse)Not determined871396181105396393Mouse
1300920Pitm3_mprion incubation time 3 (mouse)Not determined873202495107202598Mouse
27095912Pglq14_mpelvic girdle length QTL 14, 16 week (mouse)873400000126100000Mouse
1558890Lith18_mlithogenic gene 18 (mouse)Not determined875675517109675623Mouse
1357470Obq16_mobesity QTL 16 (mouse)Not determined875685348109685497Mouse
1301808Nhdlq1_mnon-HDL QTL 1 (mouse)Not determined875685348109685497Mouse
1301874Hdlq16_mHDL QTL 16 (mouse)Not determined875685348109685497Mouse
10412234Nhdlq14_mnon-HDL QTL 14 (mouse)Not determined875685348109685497Mouse
1301099Cbm2_mcerebellum weight 2 (mouse)Not determined878518613112518703Mouse
1301581Char2_mP. chabaudi malaria resistance QTL 2 (mouse)Not determined879082178113082403Mouse
12904012Cfq10_mconditioned fear QTL 10 (mouse)88006677589014359Mouse
10755530Wbc2_mwhite blood cell count 2 (mouse)881092664115092664Mouse
10755519Wbc1_mwhite blood cell count 1 (mouse)881619151115619151Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1418
Count of miRNA genes:644
Interacting mature miRNAs:810
Transcripts:ENSMUST00000121390, ENSMUST00000122053, ENSMUST00000126302, ENSMUST00000129620, ENSMUST00000130507, ENSMUST00000135382, ENSMUST00000141981, ENSMUST00000143215, ENSMUST00000144879, ENSMUST00000153691
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001252059 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001252060 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001252061 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_007578 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530587 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530588 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530589 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530590 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530591 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530592 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530593 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530594 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530595 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530596 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530597 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530598 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530599 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530600 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530601 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530602 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530603 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530605 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530609 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011248285 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243260 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243261 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036153732 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036153733 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003947221 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003947222 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003947223 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003947224 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003947226 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003947227 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004934753 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB011275 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB011276 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB025352 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB066608 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB066609 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC131189 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC145556 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC146603 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC164557 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK017088 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK052625 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK132071 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK147277 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK147288 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK147498 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK147697 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK161752 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AU254963 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AV375776 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY714490 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466525 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U76716 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000121390   ⟹   ENSMUSP00000112436
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl885,141,993 - 85,366,875 (+)Ensembl
GRCm38.p6 Ensembl884,415,364 - 84,640,246 (+)Ensembl
RefSeq Acc Id: ENSMUST00000122053   ⟹   ENSMUSP00000114055
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl885,142,006 - 85,366,692 (+)Ensembl
GRCm38.p6 Ensembl884,415,377 - 84,640,063 (+)Ensembl
RefSeq Acc Id: ENSMUST00000126302
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl885,298,426 - 85,307,091 (+)Ensembl
GRCm38.p6 Ensembl884,571,797 - 84,580,462 (+)Ensembl
RefSeq Acc Id: ENSMUST00000129620
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl885,273,723 - 85,280,713 (+)Ensembl
GRCm38.p6 Ensembl884,547,094 - 84,554,084 (+)Ensembl
RefSeq Acc Id: ENSMUST00000130507
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl885,365,620 - 85,366,063 (+)Ensembl
GRCm38.p6 Ensembl884,638,991 - 84,639,434 (+)Ensembl
RefSeq Acc Id: ENSMUST00000135382
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl885,115,069 - 85,245,668 (+)Ensembl
GRCm38.p6 Ensembl884,388,440 - 84,519,039 (+)Ensembl
RefSeq Acc Id: ENSMUST00000141981
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl885,328,073 - 85,339,671 (+)Ensembl
GRCm38.p6 Ensembl884,601,444 - 84,613,042 (+)Ensembl
RefSeq Acc Id: ENSMUST00000143215
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl885,328,060 - 85,338,709 (+)Ensembl
GRCm38.p6 Ensembl884,601,431 - 84,612,080 (+)Ensembl
RefSeq Acc Id: ENSMUST00000144879
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl885,328,099 - 85,361,153 (+)Ensembl
GRCm38.p6 Ensembl884,601,470 - 84,634,524 (+)Ensembl
RefSeq Acc Id: ENSMUST00000153691   ⟹   ENSMUSP00000158603
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl885,328,602 - 85,344,526 (+)Ensembl
GRCm38.p6 Ensembl884,601,973 - 84,617,897 (+)Ensembl
RefSeq Acc Id: ENSMUST00000215756   ⟹   ENSMUSP00000149242
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl885,142,413 - 85,366,875 (+)Ensembl
GRCm38.p6 Ensembl884,415,784 - 84,640,246 (+)Ensembl
RefSeq Acc Id: ENSMUST00000238337   ⟹   ENSMUSP00000158675
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl885,327,123 - 85,366,875 (+)Ensembl
GRCm38.p6 Ensembl884,600,494 - 84,640,246 (+)Ensembl
RefSeq Acc Id: ENSMUST00000238701   ⟹   ENSMUSP00000158803
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl885,065,268 - 85,366,875 (+)Ensembl
GRCm38.p6 Ensembl884,338,639 - 84,640,246 (+)Ensembl
RefSeq Acc Id: NM_001252059   ⟹   NP_001238988
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39885,141,993 - 85,366,878 (+)NCBI
GRCm38884,415,364 - 84,640,249 (+)NCBI
Celera888,715,985 - 88,942,662 (+)ENTREZGENE
cM Map8 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001252060   ⟹   NP_001238989
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39885,141,993 - 85,366,878 (+)NCBI
GRCm38884,415,364 - 84,640,249 (+)NCBI
Celera888,715,985 - 88,942,662 (+)ENTREZGENE
cM Map8 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001252061   ⟹   NP_001238990
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39885,141,993 - 85,366,878 (+)NCBI
GRCm38884,415,364 - 84,640,249 (+)NCBI
Celera888,715,985 - 88,942,662 (+)ENTREZGENE
cM Map8 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_007578   ⟹   NP_031604
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39885,141,993 - 85,366,878 (+)NCBI
GRCm38884,415,364 - 84,640,249 (+)NCBI
MGSCv37886,939,263 - 87,164,148 (+)RGD
Celera888,715,985 - 88,942,662 (+)RGD
cM Map8 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006530587   ⟹   XP_006530650
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39885,065,269 - 85,366,880 (+)NCBI
GRCm38884,338,643 - 84,640,251 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006530588   ⟹   XP_006530651
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39885,065,269 - 85,366,880 (+)NCBI
GRCm38884,338,642 - 84,640,229 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006530589   ⟹   XP_006530652
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39885,065,269 - 85,366,880 (+)NCBI
GRCm38884,338,643 - 84,640,251 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006530590   ⟹   XP_006530653
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39885,065,269 - 85,366,880 (+)NCBI
GRCm38884,338,643 - 84,640,251 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006530591   ⟹   XP_006530654
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39885,065,269 - 85,366,880 (+)NCBI
GRCm38884,338,643 - 84,640,251 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006530592   ⟹   XP_006530655
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39885,065,269 - 85,366,880 (+)NCBI
GRCm38884,338,643 - 84,640,251 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006530593   ⟹   XP_006530656
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39885,065,269 - 85,366,880 (+)NCBI
GRCm38884,338,643 - 84,640,229 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006530594   ⟹   XP_006530657
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39885,065,269 - 85,366,880 (+)NCBI
GRCm38884,338,643 - 84,640,251 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006530595   ⟹   XP_006530658
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39885,065,269 - 85,366,880 (+)NCBI
GRCm38884,338,643 - 84,640,251 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006530596   ⟹   XP_006530659
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39885,065,269 - 85,366,880 (+)NCBI
GRCm38884,338,643 - 84,640,229 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006530597   ⟹   XP_006530660
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39885,065,269 - 85,366,337 (+)NCBI
GRCm38884,338,643 - 84,639,708 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006530598   ⟹   XP_006530661
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39885,065,269 - 85,366,880 (+)NCBI
GRCm38884,338,643 - 84,640,229 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006530599   ⟹   XP_006530662
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39885,065,269 - 85,366,872 (+)NCBI
GRCm38884,338,643 - 84,640,243 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006530600   ⟹   XP_006530663
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39885,065,269 - 85,366,880 (+)NCBI
GRCm38884,338,643 - 84,640,229 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006530601   ⟹   XP_006530664
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39885,065,269 - 85,366,880 (+)NCBI
GRCm38884,338,643 - 84,640,063 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006530602   ⟹   XP_006530665
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39885,065,269 - 85,366,880 (+)NCBI
GRCm38884,338,642 - 84,640,251 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006530603   ⟹   XP_006530666
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39885,065,269 - 85,366,880 (+)NCBI
GRCm38884,338,643 - 84,640,251 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006530605   ⟹   XP_006530668
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39885,065,262 - 85,344,509 (+)NCBI
GRCm38884,338,637 - 84,617,880 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006530609   ⟹   XP_006530672
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39885,065,257 - 85,328,104 (+)NCBI
GRCm38884,338,632 - 84,601,475 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011248285   ⟹   XP_011246587
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39885,065,269 - 85,366,880 (+)NCBI
GRCm38884,338,643 - 84,640,251 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030243260   ⟹   XP_030099120
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39885,065,269 - 85,366,858 (+)NCBI
GRCm38884,338,643 - 84,640,229 (+)NCBI
Sequence: