Mef2c (myocyte enhancer factor 2C) - Rat Genome Database

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Gene: Mef2c (myocyte enhancer factor 2C) Mus musculus
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Symbol: Mef2c
Name: myocyte enhancer factor 2C
RGD ID: 1621607
MGI Page MGI
Description: Enables several functions, including DNA-binding transcription activator activity, RNA polymerase II-specific; HMG box domain binding activity; and histone deacetylase binding activity. Involved in several processes, including cell morphogenesis involved in differentiation; heart development; and modulation of chemical synaptic transmission. Acts upstream of or within several processes, including cardiac muscle hypertrophy in response to stress; circulatory system development; and skeletal system development. Located in nucleus. Is expressed in several structures, including alimentary system; central nervous system; heart; limb; and urinary system. Human ortholog(s) of this gene implicated in neurodevelopmental disorder with hypotonia, stereotypic hand movements, and impaired language. Orthologous to human MEF2C (myocyte enhancer factor 2C).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 5430401D19Rik; 9930028G15Rik; AV011172; Mef2; myocyte-specific enhancer factor 2C
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391383,652,136 - 83,815,198 (+)NCBIGRCm39mm39
GRCm39 Ensembl1383,652,153 - 83,815,199 (+)Ensembl
GRCm381383,504,017 - 83,667,079 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1383,504,034 - 83,667,080 (+)EnsemblGRCm38mm10GRCm38
MGSCv371383,643,033 - 83,806,684 (+)NCBIGRCm37mm9NCBIm37
MGSCv361383,981,532 - 84,141,286 (+)NCBImm8
Celera1385,760,645 - 85,921,930 (+)NCBICelera
Cytogenetic Map13C3NCBI
cM Map1343.68NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-pilocarpine  (ISO)
(S)-nicotine  (ISO)
1,2-dimethylhydrazine  (EXP)
1-naphthyl isothiocyanate  (ISO)
17beta-estradiol  (ISO)
17beta-hydroxy-5alpha-androstan-3-one  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (ISO)
2-butoxyethanol  (EXP)
3,3',5,5'-tetrabromobisphenol A  (EXP)
3,4-methylenedioxymethamphetamine  (EXP)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-diaminodiphenylmethane  (EXP)
4,4'-sulfonyldiphenol  (EXP)
5-aza-2'-deoxycytidine  (ISO)
acadesine  (ISO)
acrylamide  (ISO)
aflatoxin B1  (EXP,ISO)
Aflatoxin B2 alpha  (ISO)
all-trans-retinoic acid  (ISO)
amiodarone  (ISO)
amphetamine  (ISO)
aristolochic acid  (ISO)
Aroclor 1254  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (EXP)
benzo[a]pyrene  (EXP,ISO)
bis(2-chloroethyl) sulfide  (EXP)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP)
buta-1,3-diene  (EXP)
caffeine  (ISO)
cannabidiol  (EXP)
CGP 52608  (ISO)
chloroprene  (EXP)
chlorpyrifos  (EXP)
chrysene  (EXP)
crocidolite asbestos  (EXP)
curcumin  (EXP)
cyclosporin A  (ISO)
dantrolene  (ISO)
dexamethasone  (ISO)
dibutyl phthalate  (EXP)
dimethyl sulfoxide  (ISO)
dimethylarsinic acid  (EXP)
dioxygen  (EXP)
dorsomorphin  (ISO)
doxorubicin  (ISO)
ethanol  (EXP)
ethyl methanesulfonate  (ISO)
fenvalerate  (ISO)
ferric oxide  (EXP)
formaldehyde  (ISO)
gentamycin  (ISO)
Goe 6976  (EXP)
hydrogen cyanide  (EXP)
hydrogen peroxide  (EXP,ISO)
icariin  (EXP)
indometacin  (ISO)
isoprenaline  (EXP,ISO)
isotretinoin  (ISO)
isoxazoles  (ISO)
lead(0)  (ISO)
lead(2+)  (ISO)
maneb  (ISO)
manganese(II) chloride  (ISO)
metformin  (ISO)
methotrexate  (EXP)
methyl methanesulfonate  (ISO)
methylarsonic acid  (EXP)
methylmercury chloride  (ISO)
methylseleninic acid  (ISO)
mifepristone  (ISO)
N-methyl-4-phenylpyridinium  (ISO)
nickel atom  (EXP)
nickel sulfate  (EXP)
nicotine  (ISO)
nitrofen  (ISO)
oxaliplatin  (ISO)
panobinostat  (ISO)
paracetamol  (ISO)
paraquat  (ISO)
perfluorooctane-1-sulfonic acid  (EXP)
phenylephrine  (EXP,ISO)
phenylmercury acetate  (ISO)
phosgene  (EXP)
pioglitazone  (EXP)
pirinixic acid  (EXP)
poly(I:C)  (ISO)
resveratrol  (EXP,ISO)
rofecoxib  (ISO)
SB 203580  (EXP)
SB 431542  (ISO)
silicon dioxide  (EXP)
silver atom  (EXP)
silver(0)  (EXP)
sodium arsenate  (EXP)
sodium arsenite  (EXP)
spermine  (EXP)
streptozocin  (EXP,ISO)
succimer  (EXP)
temozolomide  (ISO)
tetrachloromethane  (EXP)
titanium dioxide  (EXP)
topotecan  (ISO)
trichloroethene  (ISO)
trichostatin A  (ISO)
triclosan  (ISO)
trimellitic anhydride  (EXP)
valproic acid  (EXP,ISO)
vinclozolin  (ISO)
vorinostat  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
apoptotic process  (IEA)
B cell homeostasis  (IMP)
B cell proliferation  (IMP)
B cell receptor signaling pathway  (IMP)
blood vessel development  (IMP)
blood vessel remodeling  (IMP)
cardiac muscle cell differentiation  (IGI,NAS)
cardiac muscle hypertrophy in response to stress  (IMP)
cardiac ventricle formation  (IGI,IMP)
cartilage morphogenesis  (IMP)
cell differentiation  (IBA)
cell fate commitment  (IMP)
cell morphogenesis involved in neuron differentiation  (IMP)
cell proliferation in bone marrow  (IGI)
cellular response to calcium ion  (IDA)
cellular response to fluid shear stress  (IDA)
cellular response to glucose stimulus  (ISO)
cellular response to growth factor stimulus  (ISO)
cellular response to lipopolysaccharide  (IDA)
cellular response to organic cyclic compound  (ISO)
cellular response to parathyroid hormone stimulus  (ISO)
cellular response to retinoic acid  (ISO)
cellular response to transforming growth factor beta stimulus  (ISO)
cellular response to trichostatin A  (IDA)
cellular response to xenobiotic stimulus  (IDA)
chondrocyte differentiation  (IGI)
dentate gyrus development  (ISO)
embryonic heart tube development  (IGI,IMP)
embryonic skeletal system morphogenesis  (IMP)
embryonic viscerocranium morphogenesis  (IMP)
endochondral ossification  (IGI,IMP)
epithelial cell proliferation involved in renal tubule morphogenesis  (IMP)
excitatory postsynaptic potential  (IMP)
gene expression  (IMP)
germinal center formation  (IMP)
glomerulus morphogenesis  (IMP)
heart development  (IBA,IMP)
heart looping  (IMP)
humoral immune response  (IMP)
learning or memory  (IMP)
MAPK cascade  (IDA,IMP,ISO)
melanocyte differentiation  (IMP)
monocyte differentiation  (IMP)
muscle cell fate determination  (IMP)
myotube differentiation  (ISO)
negative regulation of blood vessel endothelial cell migration  (ISO)
negative regulation of epithelial cell proliferation  (IMP)
negative regulation of gene expression  (IMP)
negative regulation of neuron apoptotic process  (IDA,ISO)
negative regulation of ossification  (ISO)
negative regulation of transcription by RNA polymerase II  (IGI,ISO)
negative regulation of vascular associated smooth muscle cell migration  (ISO)
negative regulation of vascular associated smooth muscle cell proliferation  (ISO)
negative regulation of vascular endothelial cell proliferation  (ISO)
nephron tubule epithelial cell differentiation  (IMP)
nervous system development  (IEA)
neural crest cell differentiation  (IMP)
neuron development  (IMP)
neuron differentiation  (IMP)
neuron migration  (IMP)
osteoblast differentiation  (IEP,IGI)
outflow tract morphogenesis  (IGI)
platelet formation  (IMP)
positive regulation of alkaline phosphatase activity  (IMP)
positive regulation of B cell proliferation  (IMP)
positive regulation of behavioral fear response  (IMP)
positive regulation of bone mineralization  (IMP)
positive regulation of cardiac muscle cell differentiation  (IMP,ISO)
positive regulation of cardiac muscle cell proliferation  (IMP)
positive regulation of cardiac muscle hypertrophy  (ISO)
positive regulation of cell proliferation in bone marrow  (IGI)
positive regulation of DNA-templated transcription  (IDA,IMP,ISO)
positive regulation of gene expression  (IDA,IMP,ISO)
positive regulation of macrophage apoptotic process  (IMP)
positive regulation of MAP kinase activity  (ISO)
positive regulation of myoblast differentiation  (ISO)
positive regulation of neuron differentiation  (IDA)
positive regulation of osteoblast differentiation  (IMP)
positive regulation of skeletal muscle cell differentiation  (ISO)
positive regulation of skeletal muscle tissue development  (ISO)
positive regulation of transcription by RNA polymerase II  (IBA,IDA,IGI,IMP,ISO)
primary heart field specification  (IMP)
regulation of AMPA receptor activity  (IMP)
regulation of dendritic spine development  (IMP)
regulation of DNA-templated transcription  (IDA,ISO)
regulation of germinal center formation  (IMP)
regulation of megakaryocyte differentiation  (IMP)
regulation of neuron apoptotic process  (IMP)
regulation of neurotransmitter secretion  (IMP)
regulation of NMDA receptor activity  (IMP)
regulation of sarcomere organization  (IMP)
regulation of synapse assembly  (IMP)
regulation of synaptic activity  (IMP)
regulation of synaptic plasticity  (IMP)
regulation of synaptic transmission, glutamatergic  (IMP)
regulation of transcription by RNA polymerase II  (IBA)
renal tubule morphogenesis  (IMP)
response to ischemia  (ISO)
response to nutrient levels  (ISO)
response to vitamin E  (ISO)
roof of mouth development  (IGI)
secondary heart field specification  (IMP)
semaphorin-plexin signaling pathway involved in axon guidance  (IMP)
sinoatrial valve morphogenesis  (IMP)
skeletal muscle cell differentiation  (IMP,NAS)
skeletal muscle tissue development  (IMP)
smooth muscle cell differentiation  (IMP)
sympathetic neuron axon guidance  (IMP)
transdifferentiation  (ISO)
ventricular cardiac muscle cell differentiation  (IMP)

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal blood vessel morphology  (IAGP)
abnormal cardiovascular system morphology  (IAGP)
abnormal craniofacial development  (IAGP)
abnormal definitive hematopoiesis  (IAGP)
abnormal dermal melanocyte morphology  (IAGP)
abnormal dorsal aorta morphology  (IAGP)
abnormal endocardium morphology  (IAGP)
abnormal endochondral bone ossification  (IAGP)
abnormal epidermal melanocyte morphology  (IAGP)
abnormal gait  (IAGP)
abnormal head morphology  (IAGP)
abnormal heart development  (IAGP)
abnormal long term potentiation  (IAGP)
abnormal mandibular angle morphology  (IAGP)
abnormal melanocyte differentiation  (IAGP)
abnormal melanosome morphology  (IAGP)
abnormal neutrophil differentiation  (IAGP)
abnormal neutrophil physiology  (IAGP)
abnormal palate development  (IAGP)
abnormal pharyngeal arch artery morphology  (IAGP)
abnormal pharyngeal arch morphology  (IAGP)
abnormal respiratory system morphology  (IAGP)
abnormal sinoatrial node morphology  (IAGP)
abnormal sinus venosus morphology  (IAGP)
abnormal skeletal muscle fiber type ratio  (IAGP)
abnormal tongue morphology  (IAGP)
abnormal trabecular bone morphology  (IAGP)
abnormal vascular development  (IAGP)
abnormal vascular endothelial cell development  (IAGP)
abnormal vitelline vasculature morphology  (IAGP)
absent tympanic ring  (IAGP)
cleft palate  (IAGP)
cyanosis  (IAGP)
decreased body weight  (IAGP)
decreased brain size  (IAGP)
decreased cardiac muscle contractility  (IAGP)
decreased germinal center B cell number  (IAGP)
decreased length of long bones  (IAGP)
decreased melanocyte number  (IAGP)
decreased skin pigmentation  (IAGP)
decreased ventricle muscle contractility  (IAGP)
delayed bone ossification  (IAGP)
dilated distal convoluted tubule  (IAGP)
dilated dorsal aorta  (IAGP)
dilated proximal convoluted tubule  (IAGP)
dilated renal tubule  (IAGP)
embryonic growth retardation  (IAGP)
embryonic lethality during organogenesis, complete penetrance  (IAGP)
enhanced paired-pulse facilitation  (IAGP)
failure of endochondral bone ossification  (IAGP)
failure of heart looping  (IAGP)
failure of sternum ossification  (IAGP)
incomplete somite formation  (IAGP)
increased kidney cell proliferation  (IAGP)
increased neuron apoptosis  (IAGP)
increased neutrophil cell number  (IAGP)
kidney cortex cyst  (IAGP)
mandible hypoplasia  (IAGP)
mandibular condyloid process hypoplasia  (IAGP)
mandibular coronoid process hypoplasia  (IAGP)
Meckel's cartilage hypoplasia  (IAGP)
neonatal lethality, complete penetrance  (IAGP)
no abnormal phenotype detected  (IAGP)
perinatal lethality  (IEA)
postnatal lethality, complete penetrance  (IAGP)
premature death  (IAGP)
prenatal lethality  (IEA)
respiratory distress  (IAGP)
short fibula  (IAGP)
short limbs  (IAGP)
short mandible  (IAGP)
short tibia  (IAGP)
temporal bone hypoplasia  (IAGP)
thin ventricular wall  (IAGP)
trabecula carnea hypoplasia  (IAGP)
ventricular hypoplasia  (IAGP)
zygomatic arch hypoplasia  (IAGP)
References

References - curated
# Reference Title Reference Citation
1. Regulation of cardiomyocyte hypertrophy in diabetes at the transcriptional level. Feng B, etal., Am J Physiol Endocrinol Metab. 2008 Jun;294(6):E1119-26. Epub 2008 Apr 15.
2. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
3. MEF2C silencing attenuates load-induced left ventricular hypertrophy by modulating mTOR/S6K pathway in mice. Pereira AH, etal., PLoS One. 2009 Dec 29;4(12):e8472.
4. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
5. Mouse MP Annotation Import Pipeline RGD automated import pipeline
6. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
8. Myocyte-specific enhancer binding factor 2C (MEF2C) expression in the dentate gyrus during development and after pilocarpine-induced status epilepticus: a preliminary report. Scorza CA, etal., Arq Neuropsiquiatr. 2008 Sep;66(3B):731-5.
9. Myocyte enhancer factors 2A and 2C induce dilated cardiomyopathy in transgenic mice. Xu J, etal., J Biol Chem. 2006 Apr 7;281(14):9152-62. Epub 2006 Feb 9.
10. Phenanthrene exposure causes cardiac arrhythmia in embryonic zebrafish via perturbing calcium handling. Zhang Y, etal., Aquat Toxicol. 2013 Jul 29;142-143C:26-32. doi: 10.1016/j.aquatox.2013.07.014.
Additional References at PubMed
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PMID:29513653   PMID:29920846   PMID:29981832   PMID:30106596   PMID:30151366   PMID:30166330   PMID:30205047   PMID:30276662   PMID:30305329   PMID:30428088   PMID:30511745   PMID:30521808  
PMID:30735130   PMID:30951706   PMID:30995482   PMID:31201155   PMID:31202927   PMID:31346235   PMID:31420455   PMID:31442442   PMID:31614133   PMID:31628386   PMID:31666685   PMID:31915320  
PMID:31930767   PMID:31979018   PMID:32132110   PMID:32212902   PMID:32418612   PMID:32655758   PMID:32736694   PMID:32757160   PMID:32778568   PMID:32851972   PMID:32975584   PMID:33249116  
PMID:33305180   PMID:33315889   PMID:33321106   PMID:33359123   PMID:33452355   PMID:33570093   PMID:33723434   PMID:33804107   PMID:34029137   PMID:34091985   PMID:34124052   PMID:34183865  
PMID:34255829   PMID:34290714   PMID:34553752   PMID:34779502   PMID:34988124   PMID:35130621   PMID:35194174   PMID:35512705   PMID:35536646   PMID:35729843  


Genomics

Comparative Map Data
Mef2c
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391383,652,136 - 83,815,198 (+)NCBIGRCm39mm39
GRCm39 Ensembl1383,652,153 - 83,815,199 (+)Ensembl
GRCm381383,504,017 - 83,667,079 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1383,504,034 - 83,667,080 (+)EnsemblGRCm38mm10GRCm38
MGSCv371383,643,033 - 83,806,684 (+)NCBIGRCm37mm9NCBIm37
MGSCv361383,981,532 - 84,141,286 (+)NCBImm8
Celera1385,760,645 - 85,921,930 (+)NCBICelera
Cytogenetic Map13C3NCBI
cM Map1343.68NCBI
MEF2C
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38588,717,117 - 88,904,105 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl588,717,117 - 88,904,257 (-)EnsemblGRCh38hg38GRCh38
GRCh37588,012,934 - 88,199,922 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36588,051,922 - 88,214,780 (-)NCBINCBI36hg18NCBI36
Build 34588,051,921 - 88,214,780NCBI
Celera583,907,023 - 84,092,551 (-)NCBI
Cytogenetic Map5q14.3NCBI
HuRef583,218,989 - 83,404,187 (-)NCBIHuRef
CHM1_1587,447,103 - 87,632,656 (-)NCBICHM1_1
T2T-CHM13v2.0589,198,250 - 89,385,215 (-)NCBI
Mef2c
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2213,973,299 - 14,136,065 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl213,993,438 - 14,132,880 (+)Ensembl
Rnor_6.0211,658,534 - 11,822,788 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl211,658,568 - 11,822,787 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0211,521,053 - 11,684,949 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4212,331,078 - 12,346,520 (-)NCBIRGSC3.4rn4RGSC3.4
Celera210,288,159 - 10,449,731 (+)NCBICelera
Cytogenetic Map2q11NCBI
Mef2c
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541822,537,285 - 22,701,434 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541822,537,388 - 22,701,434 (+)NCBIChiLan1.0ChiLan1.0
MEF2C
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1526,620,837 - 26,786,426 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl526,681,700 - 26,786,426 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0526,480,489 - 26,650,813 (+)NCBIMhudiblu_PPA_v0panPan3
MEF2C
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1319,778,997 - 19,948,203 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl319,779,007 - 19,943,852 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha321,145,574 - 21,314,826 (+)NCBI
ROS_Cfam_1.0319,687,661 - 19,856,893 (+)NCBI
ROS_Cfam_1.0 Ensembl319,687,680 - 19,856,891 (+)Ensembl
UMICH_Zoey_3.1319,665,907 - 19,834,881 (+)NCBI
UNSW_CanFamBas_1.0319,629,618 - 19,798,838 (+)NCBI
UU_Cfam_GSD_1.0319,916,077 - 20,085,117 (+)NCBI
Mef2c
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213175,400,303 - 175,565,279 (+)NCBI
SpeTri2.0NW_0049364697,060,480 - 7,225,497 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MEF2C
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl296,124,168 - 96,296,810 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1296,122,407 - 96,296,927 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2298,794,388 - 98,885,272 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MEF2C
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1482,702,378 - 82,887,491 (-)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl482,706,738 - 82,788,152 (-)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604931,746,488 - 31,916,073 (-)NCBIVero_WHO_p1.0
Mef2c
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247438,072,673 - 8,235,252 (-)EnsemblHetGla_female_1.0hetGla2
HetGla 1.0NW_0046247438,072,871 - 8,235,174 (-)NCBIHetGla_female_1.0hetGla2

Position Markers
BB372133  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381383,633,775 - 83,633,857UniSTSGRCm38
MGSCv371383,773,378 - 83,773,460UniSTSGRCm37
Celera1385,888,665 - 85,888,747UniSTS
Cytogenetic Map13C3UniSTS
cM Map1345.0UniSTS
Whitehead/MRC_RH13726.31UniSTS
RH133929  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381383,664,246 - 83,664,455UniSTSGRCm38
MGSCv371383,803,851 - 83,804,060UniSTSGRCm37
Celera1385,919,099 - 85,919,308UniSTS
Cytogenetic Map13C3UniSTS
cM Map1345.0UniSTS
Mef2c  
Mouse AssemblyChrPosition (strand)SourceJBrowse
MGSCv371383,764,775 - 83,764,840UniSTSGRCm37
Celera1385,880,256 - 85,880,321UniSTS
Cytogenetic Map13C3UniSTS
cM Map1345.0UniSTS
cM Map1345.0UniSTS
cM Map1345.0UniSTS
cM Map1345.0UniSTS
D13Mit233  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381383,596,482 - 83,596,627UniSTSGRCm38
MGSCv371383,735,743 - 83,735,888UniSTSGRCm37
Celera1385,851,387 - 85,851,527UniSTS
Cytogenetic Map13C3UniSTS
cM Map1345.0UniSTS
Whitehead Genetic1329.5UniSTS
Whitehead/MRC_RH13726.21UniSTS
Whitehead_YAC13 UniSTS
AV011172  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381383,664,246 - 83,664,384UniSTSGRCm38
MGSCv371383,803,851 - 83,803,989UniSTSGRCm37
Celera1385,919,099 - 85,919,237UniSTS
Cytogenetic Map13C3UniSTS
cM Map1345.0UniSTS
Whitehead/MRC_RH13723.35UniSTS
UniSTS:224809  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381383,659,877 - 83,660,029UniSTSGRCm38
MGSCv371383,799,482 - 83,799,634UniSTSGRCm37
Celera1385,914,728 - 85,914,880UniSTS
Cytogenetic Map13C3UniSTS
cM Map1345.0UniSTS
PMC165676P1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381383,662,425 - 83,662,620UniSTSGRCm38
MGSCv371383,802,030 - 83,802,225UniSTSGRCm37
Celera1385,917,276 - 85,917,471UniSTS
Cytogenetic Map13C3UniSTS
cM Map1345.0UniSTS
G10647  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381383,663,149 - 83,663,410UniSTSGRCm38
MGSCv371383,802,754 - 83,803,015UniSTSGRCm37
Celera1385,918,000 - 85,918,261UniSTS
Cytogenetic Map13C3UniSTS
cM Map1345.0UniSTS
STS-Z40067  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381383,666,964 - 83,667,026UniSTSGRCm38
MGSCv371383,806,569 - 83,806,631UniSTSGRCm37
Celera1385,921,815 - 85,921,877UniSTS
Cytogenetic Map13C3UniSTS
cM Map1345.0UniSTS
SGC30495  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381383,664,819 - 83,664,943UniSTSGRCm38
MGSCv371383,804,424 - 83,804,548UniSTSGRCm37
Celera1385,919,671 - 85,919,795UniSTS
Cytogenetic Map13C3UniSTS
cM Map1345.0UniSTS
Mef2c  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map13C3UniSTS
cM Map1345.0UniSTS
Mef2c  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map13C3UniSTS
cM Map1345.0UniSTS
Mef2c  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map13C3UniSTS
cM Map1345.0UniSTS
Mef2c  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map13C3UniSTS
Mef2c  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map13C3UniSTS
Mef2c  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381383,625,280 - 83,625,345UniSTSGRCm38
MGSCv371383,764,775 - 83,764,840UniSTSGRCm37
Celera1385,880,256 - 85,880,321UniSTS
Cytogenetic Map13C3UniSTS
Mef2c  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map13C3UniSTS
Mef2c  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map13C3UniSTS
Mef2c  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map13C3UniSTS


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142147Mvwf4_mmodifier of von Willebrand factor 4 (mouse)Not determined20477612112898424Mouse
10412235Scgq5_mspontaneous crescentic glomerulonephritis QTL 5 (mouse)Not determined133606090896239162Mouse
4142331Bxs6_mBXSB/MpJ autoimmune nephritis 6 (mouse)Not determined4521044283744746Mouse
10412109Bxs7_mBXSB/MpJ autoimmune nephritis 7 (mouse)Not determined134521044283744746Mouse
4142372Moo2_mmodifier of Odc2 (mouse)Not determinedX5031841184318559Mouse
1301666Eae13_msusceptibility to experimental allergic encephalomyelitis 13 (mouse)Not determined135031841184318559Mouse
1300573Elsgp2_melevated serum gp70 2 (mouse)Not determined135061682884617027Mouse
14746975Manh74_mmandible shape 74 (mouse)135247726986477269Mouse
1302073Pgct1_mprimordial germ cell tumor locus 1 (mouse)Not determined135382078387820897Mouse
1357563Bmch6_mbone mechanical trait 6 (mouse)Not determined135538498089385140Mouse
4142314Tailaq3_mtail length adjusted QTL 3 (mouse)Not determined55720354112431103Mouse
4140959W10q17_mweight 10 weeks QTL 17 (mouse)Not determined55720354112431103Mouse
4141992W6q16_mweight 6 weeks QTL 16 (mouse)Not determined55720354112431103Mouse
4142241Tailq3_mtail length QTL 3 (mouse)Not determined55720354112431103Mouse
10402414Sgp5_mserum gp70 production 5 (mouse)Not determined1356470456105422186Mouse
1357553Cia28_mcollagen induced arthritis 28 (mouse)Not determined135662924996239162Mouse
10412163Wra1_mwheel running activity 1 (mouse)Not determined135913260093132738Mouse
1300941Skl6_mskeletal size (tail length) 6 (mouse)Not determined136425082198250945Mouse
1301949Skull20_mskull morphology 20 (mouse)Not determined136425082198250945Mouse
1301445Listr2_mlisteriosis resistance 2 (mouse)Not determined1366744601100744746Mouse
1301593Heal8_mwound healing/regeneration 8 (mouse)Not determined1368053999102054119Mouse
14696726Kidrq3_mkidney weight, right QTL 3 (mouse)1368217066102217066Mouse
14747007Mancz11_mmandible centroid size 11 (mouse)1370111284104111284Mouse
4141266Mol3_mmodifier of LPS-response 3 (mouse)Not determined76132600112431103Mouse
1301610Dps1_mdelta power in slow-wave sleep 1 (mouse)Not determined137719586295730894Mouse
12880414V125Dq10_mvitamin D active form serum level QTL 10 (mouse)1378036508112036508Mouse
12880402Emlq1_memotional learning QTL 1 (mouse)137810885896866553Mouse
12879495Fexq1_mfear expression QTL 1 (mouse)137826885895836553Mouse
10043997Bw40_mbody weight QTL 40 (mouse)Not determined1479239045113239162Mouse
10045623Heal18_mwound healing regeneration 18 (mouse)Not determined1379239045113239162Mouse
1558741Ses10_msalmonella enteritidis susceptibility 10 (mouse)Not determined1382739968116740106Mouse

miRNA Target Status

Confirmed Target Of
miRNA GeneMature miRNAMethod NameResult TypeData TypeSupport TypePMID
Mir223mmu-miR-223-3pMirtarbaseexternal_infoReporter assay;Western blot;qRT-PCRFunctional MTI21213211
Mir223mmu-miR-223-3pMirtarbaseexternal_infoReporter assay;Other//Reporter assayFunctional MTI18278031
Mir223mmu-miR-223-3pTarbaseexternal_infoReporter GenePOSITIVE
Mir223mmu-miR-223-3pTarbaseexternal_infoqPCRPOSITIVE
Mir223mmu-miR-223-3pMirecordsexternal_info{changed}NA18278031
Mir27bmmu-miR-27b-3pMirtarbaseexternal_infoIn situ hybridization//Luciferase reporter assay//Functional MTI20736237

Predicted Target Of
Summary Value
Count of predictions:3098
Count of miRNA genes:600
Interacting mature miRNAs:784
Transcripts:ENSMUST00000005722, ENSMUST00000163888, ENSMUST00000185052
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001170537 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001347564 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001347566 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001347567 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001347568 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001347569 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001347571 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001347572 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001347573 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001347574 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001347575 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001347576 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001347577 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001347578 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001347579 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001347580 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001347581 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_025282 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006517123 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006517124 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006517126 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006517127 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006517128 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006517130 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006517132 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011244492 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011244495 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017315405 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030247172 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030247175 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030247176 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030247177 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036157886 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036157887 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036157888 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036157889 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036157890 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036157891 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036157892 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036157893 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036157894 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036157895 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC107750 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI645159 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK009139 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK036940 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK043267 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK044589 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK044643 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK047994 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK077371 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK077603 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK132573 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK156916 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK172512 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK172537 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY321453 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY613436 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB642670 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC026841 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC037731 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC057650 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CAAA01009931 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466563 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ155464 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CK781244 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT025631 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CU074400 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L13171 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000005722   ⟹   ENSMUSP00000005722
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1383,652,359 - 83,815,197 (+)Ensembl
GRCm38.p6 Ensembl1383,504,240 - 83,667,078 (+)Ensembl
RefSeq Acc Id: ENSMUST00000163888   ⟹   ENSMUSP00000132547
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1383,652,359 - 83,815,197 (+)Ensembl
GRCm38.p6 Ensembl1383,504,240 - 83,667,078 (+)Ensembl
RefSeq Acc Id: ENSMUST00000185052   ⟹   ENSMUSP00000138826
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1383,721,741 - 83,812,592 (+)Ensembl
GRCm38.p6 Ensembl1383,573,622 - 83,664,473 (+)Ensembl
RefSeq Acc Id: ENSMUST00000195904   ⟹   ENSMUSP00000143339
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1383,723,329 - 83,781,280 (+)Ensembl
GRCm38.p6 Ensembl1383,575,210 - 83,633,161 (+)Ensembl
RefSeq Acc Id: ENSMUST00000195984   ⟹   ENSMUSP00000143611
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1383,721,744 - 83,781,355 (+)Ensembl
GRCm38.p6 Ensembl1383,573,625 - 83,633,236 (+)Ensembl
RefSeq Acc Id: ENSMUST00000196207   ⟹   ENSMUSP00000143221
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1383,720,500 - 83,773,691 (+)Ensembl
GRCm38.p6 Ensembl1383,572,381 - 83,625,572 (+)Ensembl
RefSeq Acc Id: ENSMUST00000196493   ⟹   ENSMUSP00000142897
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1383,671,592 - 83,773,512 (+)Ensembl
GRCm38.p6 Ensembl1383,523,473 - 83,625,393 (+)Ensembl
RefSeq Acc Id: ENSMUST00000196730   ⟹   ENSMUSP00000143338
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1383,720,467 - 83,783,572 (+)Ensembl
GRCm38.p6 Ensembl1383,572,348 - 83,635,453 (+)Ensembl
RefSeq Acc Id: ENSMUST00000196832
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1383,672,916 - 83,677,468 (+)Ensembl
GRCm38.p6 Ensembl1383,524,797 - 83,529,349 (+)Ensembl
RefSeq Acc Id: ENSMUST00000197022
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1383,721,737 - 83,726,528 (+)Ensembl
GRCm38.p6 Ensembl1383,573,618 - 83,578,409 (+)Ensembl
RefSeq Acc Id: ENSMUST00000197145   ⟹   ENSMUSP00000142619
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1383,801,007 - 83,810,858 (+)Ensembl
GRCm38.p6 Ensembl1383,652,888 - 83,662,739 (+)Ensembl
RefSeq Acc Id: ENSMUST00000197146   ⟹   ENSMUSP00000143227
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1383,721,726 - 83,815,199 (+)Ensembl
GRCm38.p6 Ensembl1383,573,607 - 83,667,080 (+)Ensembl
RefSeq Acc Id: ENSMUST00000197681   ⟹   ENSMUSP00000143420
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1383,672,980 - 83,811,812 (+)Ensembl
GRCm38.p6 Ensembl1383,524,861 - 83,663,693 (+)Ensembl
RefSeq Acc Id: ENSMUST00000197722   ⟹   ENSMUSP00000142456
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1383,672,985 - 83,812,558 (+)Ensembl
GRCm38.p6 Ensembl1383,524,866 - 83,664,439 (+)Ensembl
RefSeq Acc Id: ENSMUST00000197938   ⟹   ENSMUSP00000143187
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1383,673,010 - 83,801,029 (+)Ensembl
GRCm38.p6 Ensembl1383,524,891 - 83,652,910 (+)Ensembl
RefSeq Acc Id: ENSMUST00000198064   ⟹   ENSMUSP00000142399
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1383,678,257 - 83,773,503 (+)Ensembl
GRCm38.p6 Ensembl1383,530,138 - 83,625,384 (+)Ensembl
RefSeq Acc Id: ENSMUST00000198069   ⟹   ENSMUSP00000143286
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1383,672,974 - 83,773,654 (+)Ensembl
GRCm38.p6 Ensembl1383,524,855 - 83,625,535 (+)Ensembl
RefSeq Acc Id: ENSMUST00000198199   ⟹   ENSMUSP00000143742
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1383,652,153 - 83,811,462 (+)Ensembl
GRCm38.p6 Ensembl1383,504,034 - 83,663,343 (+)Ensembl
RefSeq Acc Id: ENSMUST00000198217   ⟹   ENSMUSP00000142487
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1383,723,796 - 83,810,750 (+)Ensembl
GRCm38.p6 Ensembl1383,575,677 - 83,662,631 (+)Ensembl
RefSeq Acc Id: ENSMUST00000198360   ⟹   ENSMUSP00000143058
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1383,781,180 - 83,803,666 (+)Ensembl
GRCm38.p6 Ensembl1383,633,061 - 83,655,547 (+)Ensembl
RefSeq Acc Id: ENSMUST00000198916   ⟹   ENSMUSP00000143235
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1383,652,359 - 83,740,929 (+)Ensembl
GRCm38.p6 Ensembl1383,504,240 - 83,592,810 (+)Ensembl
RefSeq Acc Id: ENSMUST00000199019   ⟹   ENSMUSP00000143401
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1383,672,654 - 83,813,081 (+)Ensembl
GRCm38.p6 Ensembl1383,524,535 - 83,664,962 (+)Ensembl
RefSeq Acc Id: ENSMUST00000199105   ⟹   ENSMUSP00000143212
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1383,672,732 - 83,813,076 (+)Ensembl
GRCm38.p6 Ensembl1383,524,613 - 83,664,957 (+)Ensembl
RefSeq Acc Id: ENSMUST00000199167   ⟹   ENSMUSP00000142884
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1383,723,264 - 83,800,982 (+)Ensembl
GRCm38.p6 Ensembl1383,575,145 - 83,652,863 (+)Ensembl
RefSeq Acc Id: ENSMUST00000199210   ⟹   ENSMUSP00000142595
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1383,723,796 - 83,810,750 (+)Ensembl
GRCm38.p6 Ensembl1383,575,677 - 83,662,631 (+)Ensembl
RefSeq Acc Id: ENSMUST00000199262
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1383,673,039 - 83,782,006 (+)Ensembl
GRCm38.p6 Ensembl1383,524,920 - 83,633,887 (+)Ensembl
RefSeq Acc Id: ENSMUST00000199432   ⟹   ENSMUSP00000142714
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1383,672,973 - 83,812,577 (+)Ensembl
GRCm38.p6 Ensembl1383,524,854 - 83,664,458 (+)Ensembl
RefSeq Acc Id: ENSMUST00000199450   ⟹   ENSMUSP00000143315
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1383,652,325 - 83,811,805 (+)Ensembl
GRCm38.p6 Ensembl1383,504,206 - 83,663,686 (+)Ensembl
RefSeq Acc Id: ENSMUST00000200123   ⟹   ENSMUSP00000142833
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1383,652,359 - 83,740,995 (+)Ensembl
GRCm38.p6 Ensembl1383,504,240 - 83,592,876 (+)Ensembl
RefSeq Acc Id: ENSMUST00000200138   ⟹   ENSMUSP00000142715
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1383,773,722 - 83,810,855 (+)Ensembl
GRCm38.p6 Ensembl1383,625,603 - 83,662,736 (+)Ensembl
RefSeq Acc Id: ENSMUST00000200394   ⟹   ENSMUSP00000143598
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1383,672,410 - 83,781,254 (+)Ensembl
GRCm38.p6 Ensembl1383,524,291 - 83,633,135 (+)Ensembl
RefSeq Acc Id: NM_001170537   ⟹   NP_001164008
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391383,652,153 - 83,815,198 (+)NCBI
GRCm381383,504,034 - 83,667,079 (+)ENTREZGENE
MGSCv371383,643,033 - 83,806,684 (+)RGD
Celera1385,760,645 - 85,921,930 (+)RGD
cM Map13 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001347564   ⟹   NP_001334493
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391383,652,153 - 83,815,198 (+)NCBI
GRCm381383,504,034 - 83,667,079 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001347566   ⟹   NP_001334495
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391383,672,862 - 83,815,198 (+)NCBI
GRCm381383,524,743 - 83,667,079 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001347567   ⟹   NP_001334496
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391383,672,862 - 83,815,198 (+)NCBI
GRCm381383,524,743 - 83,667,079 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001347568   ⟹   NP_001334497
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391383,672,862 - 83,815,198 (+)NCBI
GRCm381383,524,743 - 83,667,079 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001347569   ⟹   NP_001334498
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391383,721,726 - 83,815,198 (+)NCBI
GRCm381383,573,607 - 83,667,079 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001347571   ⟹   NP_001334500
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391383,652,153 - 83,815,198 (+)NCBI
GRCm381383,504,034 - 83,667,079 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001347572   ⟹   NP_001334501
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391383,652,153 - 83,815,198 (+)NCBI
GRCm381383,504,034 - 83,667,079 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001347573   ⟹   NP_001334502
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391383,671,775 - 83,815,198 (+)NCBI
GRCm381383,523,656 - 83,667,079 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001347574   ⟹   NP_001334503
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391383,671,775 - 83,815,198 (+)NCBI
GRCm381383,523,656 - 83,667,079 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001347575   ⟹   NP_001334504
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391383,672,862 - 83,815,198 (+)NCBI
GRCm381383,524,743 - 83,667,079 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001347576   ⟹   NP_001334505
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391383,672,862 - 83,815,198 (+)NCBI
GRCm381383,524,743 - 83,667,079 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001347577   ⟹   NP_001334506
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391383,721,726 - 83,815,198 (+)NCBI
GRCm381383,573,607 - 83,667,079 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001347578   ⟹   NP_001334507
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391383,672,862 - 83,815,198 (+)NCBI
GRCm381383,524,743 - 83,667,079 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001347579   ⟹   NP_001334508
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391383,671,775 - 83,815,198 (+)NCBI
GRCm381383,523,656 - 83,667,079 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001347580   ⟹   NP_001334509
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391383,672,862 - 83,815,198 (+)NCBI
GRCm381383,524,743 - 83,667,079 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001347581   ⟹   NP_001334510
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391383,672,862 - 83,815,198 (+)NCBI
GRCm381383,524,743 - 83,667,079 (+)NCBI
Sequence:
RefSeq Acc Id: NM_025282   ⟹   NP_079558
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391383,652,153 - 83,815,198 (+)NCBI
GRCm381383,504,034 - 83,667,079 (+)ENTREZGENE
MGSCv371383,643,033 - 83,806,684 (+)RGD
Celera1385,760,645 - 85,921,930 (+)RGD
cM Map13 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006517123   ⟹   XP_006517186
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391383,652,136 - 83,815,197 (+)NCBI
GRCm381383,504,017 - 83,666,343 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006517124   ⟹   XP_006517187
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391383,672,645 - 83,815,197 (+)NCBI
GRCm381383,524,524 - 83,666,343 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006517126   ⟹   XP_006517189
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391383,672,636 - 83,815,197 (+)NCBI
GRCm381383,524,517 - 83,666,343 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006517127   ⟹   XP_006517190
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391383,672,636 - 83,815,197 (+)NCBI
GRCm381383,524,523 - 83,667,078 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006517128   ⟹   XP_006517191
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391383,672,636 - 83,815,197 (+)NCBI
GRCm381383,524,515 - 83,667,078 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006517130   ⟹   XP_006517193
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391383,672,636 - 83,814,462 (+)NCBI
GRCm381383,524,525 - 83,664,439 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006517132   ⟹   XP_006517195
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391383,672,636 - 83,814,462 (+)NCBI
GRCm381383,524,520 - 83,664,439 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011244492   ⟹   XP_011242794
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391383,672,454 - 83,815,197 (+)NCBI
GRCm381383,524,854 - 83,666,343 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011244495   ⟹   XP_011242797
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391383,672,636 - 83,815,197 (+)NCBI
GRCm381383,524,515 - 83,667,078 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017315405   ⟹   XP_017170894
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391383,671,571 - 83,815,197 (+)NCBI
GRCm381383,523,651 - 83,666,343 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030247172   ⟹   XP_030103032
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391383,671,388 - 83,815,197 (+)NCBI
GRCm381383,523,458 - 83,666,343 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030247175   ⟹   XP_030103035
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391383,672,402 - 83,815,197 (+)NCBI
GRCm381383,524,523 - 83,667,078 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030247176   ⟹   XP_030103036
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391383,672,454 - 83,815,197 (+)NCBI
GRCm381383,524,523 - 83,667,078 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030247177   ⟹   XP_030103037
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391383,672,454 - 83,815,197 (+)NCBI
GRCm381383,524,822 - 83,666,343 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036157886   ⟹   XP_036013779
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391383,673,388 - 83,815,197 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036157887   ⟹   XP_036013780
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391383,671,388 - 83,815,197 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036157888   ⟹   XP_036013781
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391383,652,266 - 83,815,197 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036157889   ⟹   XP_036013782
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391383,672,636 - 83,815,197 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036157890   ⟹   XP_036013783
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391383,672,649 - 83,815,197 (+)NCBI
Sequence: