Foxp3 (forkhead box P3) - Rat Genome Database

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Gene: Foxp3 (forkhead box P3) Mus musculus
Analyze
Symbol: Foxp3
Name: forkhead box P3
RGD ID: 1557838
MGI Page MGI
Description: Exhibits several functions, including DNA-binding transcription factor activity, RNA polymerase II-specific; identical protein binding activity; and transcription corepressor activity. Involved in several processes, including positive regulation of T cell tolerance induction; regulation of T cell activation; and regulation of gene expression. Localizes to cytoplasm and nucleus. Is expressed in central nervous system; genitourinary system; hemolymphoid system; and retina. Used to study Wiskott-Aldrich syndrome and immune dysregulation-polyendocrinopathy-enteropathy-X-linked syndrome. Human ortholog(s) of this gene implicated in Human papillomavirus infectious disease; colorectal cancer; immune dysregulation-polyendocrinopathy-enteropathy-X-linked syndrome; pulmonary tuberculosis; and type 1 diabetes mellitus. Orthologous to human FOXP3 (forkhead box P3).
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: forkhead box protein P3; JM2; scu; scurfin; scurfy; sf
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X7,445,915 - 7,461,482 (+)NCBIGRCm39mm39
GRCm39 EnsemblX7,439,883 - 7,461,484 (+)Ensembl
GRCm38X7,579,676 - 7,595,243 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX7,573,644 - 7,595,245 (+)EnsemblGRCm38mm10GRCm38
MGSCv37X7,156,819 - 7,172,360 (+)NCBIGRCm37mm9NCBIm37
MGSCv36X6,736,652 - 6,752,193 (+)NCBImm8
CeleraX3,876,537 - 3,892,077 (-)NCBICelera
Cytogenetic MapXA1.1NCBI
cM MapX3.41NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View
Acute-On-Chronic Liver Failure  (ISO)
adult T-cell leukemia  (ISO)
Airway Remodeling  (IDA)
allergic disease  (ISO)
anemia  (ISO)
Animal Toxoplasmosis  (IEP)
anogenital venereal wart  (ISO)
asthma  (IDA,ISO)
autistic disorder  (ISO)
bacterial pneumonia  (IEP)
Breast Neoplasms  (ISO)
bronchiolitis obliterans  (ISO)
cervical squamous cell carcinoma  (ISO)
chlamydia  (ISO)
Chronic Hepatitis B  (ISO)
Chronic Hepatitis C  (ISO)
colorectal cancer  (ISO)
congenital disorder of glycosylation type IIm  (ISO)
cutaneous leishmaniasis  (ISO)
dermatitis  (IMP)
diabetes mellitus  (ISO)
Dysbiosis  (ISO)
endometriosis  (ISO)
Endotoxemia  (ISO)
Epstein-Barr Virus Infections  (ISO)
Experimental Arthritis  (ISO)
Experimental Autoimmune Myocarditis  (ISO)
Experimental Autoimmune Neuritis  (ISO)
Experimental Colitis  (IEP,ISO)
Experimental Diabetes Mellitus  (ISO)
genetic disease  (ISO)
Graft vs Host Disease  (ISO)
hepatitis B  (ISO)
hepatitis C  (ISO)
hepatocellular carcinoma  (ISO)
Hydranencephaly with Renal Aplasia-Dysplasia  (ISO)
Hydrops Fetalis  (ISO)
hypertension  (ISO)
hypothyroidism  (ISO)
immune dysregulation-polyendocrinopathy-enteropathy-X-linked syndrome  (IEA,ISO)
infectious mononucleosis  (ISO)
intrahepatic cholangiocarcinoma  (ISO)
Korean hemorrhagic fever  (ISO)
Lung Injury  (ISO)
malaria  (ISO)
multidrug-resistant tuberculosis  (ISO)
Neuralgia  (IDA,ISO)
neurodegeneration with brain iron accumulation 5  (ISO)
occupational dermatitis  (ISO)
papillomavirus infectious disease  (ISO)
pleural tuberculosis  (ISO)
polycystic ovary syndrome  (ISO)
primary biliary cholangitis  (ISO)
pulmonary tuberculosis  (ISO)
Recurrent Respiratory Papillomatosis  (ISO)
rheumatoid arthritis  (ISO)
Sepsis  (ISO)
spermatogenic failure 3  (ISO)
Spinal Cord Injuries  (ISO)
Squamous Intraepithelial Lesions of the Cervix  (ISO)
syndromic X-linked intellectual disability Lubs type  (ISO)
syphilis  (ISO)
Transplant Rejection  (IEP,ISO)
tropical spastic paraparesis  (ISO)
type 1 diabetes mellitus  (ISO)
vaccinia  (IMP)
Wiskott-Aldrich syndrome  (IEA)
Wound Infection  (ISO)

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-catechin  (ISO)
(+)-Tetrandrine  (EXP)
(R)-mevalonic acid  (EXP)
(S)-nicotine  (EXP)
1-Hydroxypyrene  (ISO)
1-naphthyl isothiocyanate  (EXP,ISO)
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (EXP,ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
5-aza-2'-deoxycytidine  (EXP,ISO)
5-azacytidine  (EXP)
aflatoxin B1  (ISO)
alloxan  (EXP)
alpha-naphthoflavone  (EXP)
amiodarone  (ISO)
amphetamine  (ISO)
arsane  (EXP,ISO)
arsenic atom  (EXP,ISO)
arsenous acid  (EXP,ISO)
benzalkonium chloride  (EXP)
benzo[a]pyrene  (EXP,ISO)
bisphenol A  (EXP,ISO)
bleomycin A2  (EXP)
calcitriol  (ISO)
carbon monoxide  (ISO)
carbon nanotube  (EXP)
chlorpyrifos  (EXP)
cyclophosphamide  (EXP)
deoxynivalenol  (ISO)
dextran sulfate  (EXP,ISO)
diallyl trisulfide  (EXP)
diarsenic trioxide  (EXP,ISO)
fingolimod hydrochloride  (ISO)
fragrance  (ISO)
fulvestrant  (ISO)
fumonisin B1  (ISO)
hydralazine  (EXP)
lead diacetate  (EXP,ISO)
lead(0)  (ISO)
lead(2+)  (ISO)
leflunomide  (EXP)
levamisole  (EXP)
lipopolysaccharide  (EXP)
methimazole  (ISO)
nickel atom  (ISO)
nicotine  (EXP)
nitrogen dioxide  (ISO)
obeticholic acid  (ISO)
ozone  (ISO)
phenanthrene  (ISO)
phenytoin  (EXP)
platycodin D  (EXP)
procainamide  (EXP)
progesterone  (EXP,ISO)
quinacrine  (ISO)
resveratrol  (EXP)
rotenone  (ISO)
S-butyl-DL-homocysteine (S,R)-sulfoximine  (EXP,ISO)
silicon dioxide  (ISO)
simvastatin  (EXP,ISO)
sirolimus  (EXP,ISO)
sodium arsenite  (EXP)
tamibarotene  (EXP)
tamoxifen  (ISO)
testosterone  (EXP)
toluene  (EXP)
trichloroethene  (ISO)
trichostatin A  (EXP)
Triptolide  (EXP)
triptonide  (EXP)
valproic acid  (ISO)
zidovudine  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
B cell homeostasis  (IMP)
CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation  (ISO)
CD4-positive, CD25-positive, alpha-beta regulatory T cell lineage commitment  (TAS)
establishment of endothelial blood-brain barrier  (ISO)
gene expression  (IMP)
myeloid cell homeostasis  (IMP)
negative regulation of cell population proliferation  (ISO)
negative regulation of chronic inflammatory response  (IDA,IMP)
negative regulation of CREB transcription factor activity  (ISO)
negative regulation of cytokine production  (ISO)
negative regulation of defense response to virus  (ISO)
negative regulation of DNA-binding transcription factor activity  (ISO)
negative regulation of gene expression  (IDA)
negative regulation of histone acetylation  (IDA)
negative regulation of histone deacetylation  (ISO)
negative regulation of immune response  (ISO)
negative regulation of inflammatory response  (IMP)
negative regulation of interferon-gamma production  (IDA,IMP,ISO)
negative regulation of interleukin-10 production  (IMP,ISO)
negative regulation of interleukin-17 production  (IMP,ISO)
negative regulation of interleukin-2 production  (IDA,IMP,ISO)
negative regulation of interleukin-4 production  (IDA,IMP,ISO)
negative regulation of interleukin-5 production  (IDA,IMP)
negative regulation of interleukin-6 production  (IMP)
negative regulation of isotype switching to IgE isotypes  (IMP)
negative regulation of lymphocyte proliferation  (IMP)
negative regulation of NF-kappaB transcription factor activity  (ISO)
negative regulation of T cell cytokine production  (ISO)
negative regulation of T cell proliferation  (IDA,IMP,ISO)
negative regulation of T-helper 17 cell differentiation  (ISO)
negative regulation of transcription by RNA polymerase II  (IBA,IDA,IMP)
negative regulation of transcription, DNA-templated  (IDA,ISO)
negative regulation of tumor necrosis factor production  (IMP)
positive regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation  (IMP,TAS)
positive regulation of gene expression  (IDA)
positive regulation of histone acetylation  (IDA,ISO)
positive regulation of immature T cell proliferation in thymus  (IMP)
positive regulation of interleukin-4 production  (IMP)
positive regulation of peripheral T cell tolerance induction  (IMP)
positive regulation of regulatory T cell differentiation  (IDA,IMP)
positive regulation of T cell anergy  (IMP)
positive regulation of T cell tolerance induction  (IMP)
positive regulation of transcription by RNA polymerase II  (IDA,IMP,ISO)
positive regulation of transcription, DNA-templated  (IDA,IMP,ISO)
positive regulation of transforming growth factor beta1 production  (IDA)
regulation of immunoglobulin production  (IMP)
regulation of isotype switching to IgG isotypes  (IMP)
regulation of T cell anergy  (IMP)
regulation of transcription by RNA polymerase II  (IBA,IGI)
regulation of transcription, DNA-templated  (IEA)
response to lipopolysaccharide  (ISO)
response to radiation  (ISO)
response to rapamycin  (ISO)
response to virus  (ISO)
T cell activation  (IMP,ISO)
T cell mediated immunity  (IMP)
T cell receptor signaling pathway  (IMP)
tolerance induction  (IDA)
tolerance induction to self antigen  (IMP)

Cellular Component
cytoplasm  (IDA,ISO)
nucleoplasm  (ISO)
nucleus  (IBA,IDA,ISO)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal atrial thrombosis  (IAGP)
abnormal B cell physiology  (IAGP)
abnormal breathing pattern  (IAGP)
abnormal CD4-positive T cell differentiation  (IAGP)
abnormal CD4-positive, alpha beta T cell morphology  (IAGP)
abnormal CD4-positive, alpha-beta T cell physiology  (IAGP)
abnormal CD4-positive, CD25-positive, alpha-beta regulatory T cell morphology  (IAGP)
abnormal CD8-positive, alpha beta T cell morphology  (IAGP)
abnormal CD8-positive, alpha-beta T cell physiology  (IAGP)
abnormal chemokine level  (IAGP)
abnormal cytokine secretion  (IAGP)
abnormal dendritic cell physiology  (IAGP)
abnormal double-positive T cell morphology  (IAGP)
abnormal effector T cell morphology  (IAGP)
abnormal epidermal layer morphology  (IAGP)
abnormal erythrocyte morphology  (IAGP)
abnormal eyelid morphology  (IAGP)
abnormal gut-associated lymphoid tissue morphology  (IAGP)
abnormal hepatic cord morphology  (IAGP)
abnormal homeostasis  (IAGP)
abnormal immune system organ morphology  (IAGP)
abnormal immune system physiology  (IAGP)
abnormal immunoglobulin level  (IAGP)
abnormal inflammatory response  (IAGP)
abnormal interferon-gamma secretion  (IAGP)
abnormal interleukin level  (IAGP)
abnormal interleukin secretion  (IAGP)
abnormal interleukin-4 secretion  (IAGP)
abnormal intraepithelial T cell morphology  (IAGP)
abnormal liver morphology  (IAGP)
abnormal lymph node B cell domain morphology  (IAGP)
abnormal lymph node medullary cord morphology  (IAGP)
abnormal lymph node morphology  (IAGP)
abnormal lymph node T cell domain morphology  (IAGP)
abnormal lymph organ size  (IAGP)
abnormal lymphocyte morphology  (IAGP)
abnormal lymphocyte physiology  (IAGP)
abnormal lymphopoiesis  (IAGP)
abnormal macrophage morphology  (IAGP)
abnormal male reproductive system morphology  (IAGP)
abnormal megakaryocyte progenitor cell morphology  (IAGP)
abnormal mesenteric lymph node morphology  (IAGP)
abnormal Peyer's patch morphology  (IAGP)
abnormal regulatory T cell morphology  (IAGP)
abnormal regulatory T cell number  (IAGP)
abnormal regulatory T cell physiology  (IAGP)
abnormal reproductive system development  (IEA)
abnormal respiratory mucosa goblet cell morphology  (IAGP)
abnormal reticulocyte morphology  (IAGP)
abnormal skin appearance  (IAGP)
abnormal small intestine morphology  (IAGP)
abnormal spleen B cell follicle morphology  (IAGP)
abnormal spleen morphology  (IAGP)
abnormal spleen white pulp morphology  (IAGP)
abnormal splenic cell ratio  (IAGP)
abnormal T cell activation  (IAGP)
abnormal T cell differentiation  (IAGP)
abnormal T cell subpopulation ratio  (IAGP)
abnormal T-helper 2 cell differentiation  (IAGP)
abnormal T-helper 2 physiology  (IAGP)
abnormal tail morphology  (IAGP)
abnormal tail ring morphology  (IAGP)
abnormal thymus cortex morphology  (IAGP)
abnormal thymus morphology  (IAGP)
abnormal tumor necrosis factor level  (IAGP)
abnormal type IV hypersensitivity reaction  (IAGP)
absent prostate gland anterior lobe  (IEA)
absent regulatory T cells  (IAGP)
absent scrotum  (IAGP)
absent seminal vesicle  (IEA)
absent spleen marginal zone  (IAGP)
alopecia  (IEA)
anemia  (IAGP)
anisocytosis  (IAGP)
autoimmune response  (IAGP)
azoospermia  (IEA)
blepharitis  (IAGP)
blood vessel inflammation  (IAGP)
bradykinesia  (IAGP)
cachexia  (IAGP)
chronic inflammation  (IAGP)
colitis  (IAGP)
conjunctivitis  (IAGP)
cryptorchism  (IAGP)
crypts of Lieberkuhn abscesses  (IAGP)
decreased blood oxygen saturation level  (IAGP)
decreased body size  (IAGP)
decreased body surface temperature  (IAGP)
decreased body weight  (IAGP)
decreased CD4-positive, alpha beta T cell number  (IAGP)
decreased CD4-positive, CD25-positive, alpha-beta regulatory T cell number  (IAGP)
decreased CD8-positive, alpha-beta T cell number  (IAGP)
decreased circulating interleukin-6 level  (IAGP)
decreased circulating lipase level  (IAGP)
decreased double-positive T cell number  (IAGP)
decreased erythrocyte cell number  (IAGP)
decreased hematocrit  (IAGP)
decreased hemoglobin content  (IAGP)
decreased interferon-gamma secretion  (IAGP)
decreased interleukin-10 secretion  (IAGP)
decreased interleukin-17 secretion  (IAGP)
decreased megakaryocyte cell number  (IAGP)
decreased regulatory T cell number  (IAGP)
decreased small intestinal microvillus size  (IAGP)
decreased susceptibility to experimental autoimmune encephalomyelitis  (IAGP)
decreased T cell number  (IAGP)
decreased T cell proliferation  (IAGP)
decreased thymocyte number  (IAGP)
delayed eyelid opening  (IAGP)
dermatitis  (IAGP)
diarrhea  (IAGP)
dilated liver sinusoidal spaces  (IAGP)
distended abdomen  (IAGP)
dry skin  (IEA)
enlarged heart  (IAGP)
enlarged liver  (IAGP)
enlarged lymph nodes  (IAGP)
enlarged spleen  (IAGP)
epidermal hyperplasia  (IAGP)
extramedullary hematopoiesis  (IAGP)
focal hair loss  (IAGP)
gastrointestinal hemorrhage  (IAGP)
glomerulonephritis  (IAGP)
granulomatous inflammation  (IAGP)
hemosiderosis  (IAGP)
hunched posture  (IAGP)
hypoactivity  (IAGP)
increased activated T cell number  (IAGP)
increased autoantibody level  (IAGP)
increased B cell number  (IAGP)
increased CD4-positive, alpha beta T cell number  (IAGP)
increased CD8-positive, alpha-beta T cell number  (IAGP)
increased circulating interferon-gamma level  (IAGP)
increased circulating interleukin-10 level  (IAGP)
increased circulating interleukin-4 level  (IAGP)
increased circulating interleukin-5 level  (IAGP)
increased circulating interleukin-6 level  (IAGP)
increased circulating tumor necrosis factor level  (IAGP)
increased dendritic cell number  (IAGP)
increased effector memory T-helper cell number  (IAGP)
increased eosinophil cell number  (IAGP)
increased germinal center B cell number  (IAGP)
increased IgA level  (IAGP)
increased IgE level  (IAGP)
increased IgG level  (IAGP)
increased IgG1 level  (IAGP)
increased IgM level  (IAGP)
increased immunoglobulin level  (IAGP)
increased inflammatory response  (IAGP)
increased interferon-gamma secretion  (IAGP)
increased interleukin-10 secretion  (IAGP)
increased interleukin-13 secretion  (IAGP)
increased interleukin-17 secretion  (IAGP)
increased interleukin-2 secretion  (IAGP)
increased interleukin-4 secretion  (IAGP)
increased interleukin-5 secretion  (IAGP)
increased interleukin-6 secretion  (IAGP)
increased leukocyte cell number  (IAGP)
increased lymphocyte cell number  (IAGP)
increased mean corpuscular volume  (IAGP)
increased mean platelet volume  (IAGP)
increased monocyte cell number  (IAGP)
increased plasma cell number  (IAGP)
increased regulatory T cell apoptosis  (IAGP)
increased regulatory T cell number  (IAGP)
increased sensitivity to induced morbidity/mortality  (IAGP)
increased spleen germinal center number  (IAGP)
increased spleen red pulp amount  (IAGP)
increased spleen weight  (IAGP)
increased spleen white pulp amount  (IAGP)
increased susceptibility to autoimmune disorder  (IAGP)
increased susceptibility to experimental autoimmune encephalomyelitis  (IAGP)
increased susceptibility to Orthomyxoviridae infection  (IAGP)
increased susceptibility to type IV hypersensitivity reaction  (IAGP)
increased T cell apoptosis  (IAGP)
increased T cell number  (IAGP)
increased T cell proliferation  (IAGP)
increased T follicular helper cell number  (IAGP)
increased tumor necrosis factor secretion  (IAGP)
intermingled spleen red and white pulp  (IAGP)
jaundice  (IAGP)
lethality at weaning, complete penetrance  (IAGP)
lethargy  (IAGP)
liver inflammation  (IAGP)
lung inflammation  (IAGP)
lymph node hyperplasia  (IAGP)
lymph node inflammation  (IAGP)
male infertility  (IAGP)
melena  (IAGP)
multifocal hepatic necrosis  (IAGP)
myocarditis  (IAGP)
narrow eye opening  (IAGP)
no abnormal phenotype detected  (IAGP)
orthokeratosis  (IAGP)
pale kidney  (IAGP)
pale liver  (IAGP)
pancreas atrophy  (IAGP)
pancreas inflammation  (IAGP)
parakeratosis  (IAGP)
paralysis  (IAGP)
pleural effusion  (IAGP)
poikilocytosis  (IAGP)
polychromatophilia  (IAGP)
postnatal growth retardation  (IAGP)
postnatal lethality  (IAGP)
postnatal lethality, complete penetrance  (IAGP)
postnatal lethality, incomplete penetrance  (IAGP)
premature aging  (IAGP)
premature death  (IAGP)
respiratory system inflammation  (IAGP)
ruffled hair  (IAGP)
salivary gland inflammation  (IAGP)
scaly ears  (IAGP)
scaly skin  (IAGP)
short perineum  (IAGP)
skin inflammation  (IAGP)
skin lesions  (IAGP)
small ears  (IAGP)
small gonad  (IAGP)
small intestinal inflammation  (IAGP)
small testis  (IAGP)
small thymus  (IAGP)
spleen hyperplasia  (IAGP)
stomach inflammation  (IAGP)
thick ears  (IAGP)
thrombocytopenia  (IAGP)
thymus hypoplasia  (IAGP)
tight skin  (IAGP)
weight loss  (IAGP)
References

References - curated
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28. MGD data from the GO Consortium
29. MGD IEA
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32. OMIM Disease Annotation Pipeline
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PMID:25065622   PMID:25080578   PMID:25082897   PMID:25102154   PMID:25113973   PMID:25126782   PMID:25126783   PMID:25127859   PMID:25128167   PMID:25139358   PMID:25154413   PMID:25194146  
PMID:25202978   PMID:25218473   PMID:25219397   PMID:25231532   PMID:25243909   PMID:25263123   PMID:25264896   PMID:25275926   PMID:25293774   PMID:25304264   PMID:25305591   PMID:25315497  
PMID:25318356   PMID:25320234   PMID:25330759   PMID:25343479   PMID:25347469   PMID:25348202   PMID:25372844   PMID:25383186   PMID:25393765   PMID:25411202   PMID:25415436   PMID:25416630  
PMID:25464855   PMID:25473049   PMID:25478691   PMID:25482559   PMID:25501630   PMID:25533288   PMID:25548231   PMID:25559257   PMID:25559258   PMID:25581706   PMID:25588867   PMID:25592296  
PMID:25599561   PMID:25599562   PMID:25607885   PMID:25630940   PMID:25640181   PMID:25642770   PMID:25642823   PMID:25653051   PMID:25658840   PMID:25662996   PMID:25669152   PMID:25680271  
PMID:25681462   PMID:25695215   PMID:25712341   PMID:25712342   PMID:25712878   PMID:25727069   PMID:25751061   PMID:25764512   PMID:25769611   PMID:25770130   PMID:25778793   PMID:25786177  
PMID:25791085   PMID:25795920   PMID:25818301   PMID:25850927   PMID:25856405   PMID:25863247   PMID:25910642   PMID:25924064   PMID:25939024   PMID:25939026   PMID:25944401   PMID:25973010  
PMID:25978037   PMID:25979421   PMID:25987564   PMID:25998054   PMID:26013006   PMID:26019294   PMID:26056255   PMID:26059660   PMID:26060310   PMID:26062998   PMID:26070317   PMID:26070485  
PMID:26077720   PMID:26084024   PMID:26084026   PMID:26092469   PMID:26107960   PMID:26114424   PMID:26147684   PMID:26149776   PMID:26153417   PMID:26160380   PMID:26165721   PMID:26198700  
PMID:26201900   PMID:26208901   PMID:26213383   PMID:26223651   PMID:26224007   PMID:26231118   PMID:26234742   PMID:26268655   PMID:26272906   PMID:26275994   PMID:26280119   PMID:26284939  
PMID:26302753   PMID:26304965   PMID:26307665   PMID:26317471   PMID:26320657   PMID:26324768   PMID:26332258   PMID:26341400   PMID:26365427   PMID:26368307   PMID:26413872   PMID:26420876  
PMID:26420908   PMID:26438362   PMID:26458493   PMID:26472910   PMID:26474535   PMID:26483205   PMID:26495986   PMID:26510014   PMID:26511769   PMID:26523865   PMID:26524592   PMID:26524661  
PMID:26529256   PMID:26529512   PMID:26538561   PMID:26572061   PMID:26582951   PMID:26583087   PMID:26590316   PMID:26601142   PMID:26613896   PMID:26627244   PMID:26634899   PMID:26644347  
PMID:26726812   PMID:26731275   PMID:26745371   PMID:26752376   PMID:26768846   PMID:26783747   PMID:26789248   PMID:26808230   PMID:26815406   PMID:26818423   PMID:26829766   PMID:26832402  
PMID:26872695   PMID:26872699   PMID:26887860   PMID:26892542   PMID:26895644   PMID:26903243   PMID:26903244   PMID:26910010   PMID:26927553   PMID:26931177   PMID:26965320   PMID:26968425  
PMID:26974206   PMID:26975663   PMID:27009467   PMID:27021296   PMID:27036736   PMID:27037189   PMID:27043409   PMID:27044095   PMID:27049955   PMID:27077371   PMID:27100298   PMID:27130185  
PMID:27130899   PMID:27139493   PMID:27148746   PMID:27151919   PMID:27166946   PMID:27178223   PMID:27217485   PMID:27226371   PMID:27256565   PMID:27256884   PMID:27261277   PMID:27261457  
PMID:27267497   PMID:27317259   PMID:27323847   PMID:27332731   PMID:27348411   PMID:27396532   PMID:27410049   PMID:27425617   PMID:27438767   PMID:27478940   PMID:27479084   PMID:27482882  
PMID:27487182   PMID:27488350   PMID:27496732   PMID:27500496   PMID:27503925   PMID:27533281   PMID:27548066   PMID:27581189   PMID:27595233   PMID:27635087   PMID:27643438   PMID:27659419  
PMID:27663893   PMID:27680685   PMID:27681432   PMID:27695002   PMID:27695003   PMID:27697523   PMID:27731341   PMID:27760760   PMID:27769803   PMID:27793593   PMID:27851915   PMID:27855783  
PMID:27857073   PMID:27861999   PMID:27879269   PMID:27893700   PMID:27895423   PMID:27909059   PMID:27936218   PMID:27974197   PMID:27992401   PMID:27994068   PMID:28003377   PMID:28033400  
PMID:28039301   PMID:28052242   PMID:28059703   PMID:28067667   PMID:28077598   PMID:28085151   PMID:28092372   PMID:28094802   PMID:28099866   PMID:28108611   PMID:28114290   PMID:28115586  
PMID:28115587   PMID:28115588   PMID:28122327   PMID:28130403   PMID:28194435   PMID:28219891   PMID:28228257   PMID:28250159   PMID:28267764   PMID:28288125   PMID:28290453   PMID:28295248  
PMID:28300338   PMID:28303891   PMID:28320131   PMID:28330901   PMID:28355562   PMID:28362433   PMID:28377411   PMID:28384713   PMID:28386044   PMID:28396406   PMID:28416194   PMID:28429709  
PMID:28452361   PMID:28468969   PMID:28473623   PMID:28497863   PMID:28503202   PMID:28507037   PMID:28507062   PMID:28515282   PMID:28533380   PMID:28539382   PMID:28539427   PMID:28539431  
PMID:28540653   PMID:28542128   PMID:28542613   PMID:28550203   PMID:28552348   PMID:28556921   PMID:28580955   PMID:28600288   PMID:28600891   PMID:28607488   PMID:28611041   PMID:28621313  
PMID:28635957   PMID:28646041   PMID:28646042   PMID:28652396   PMID:28652399   PMID:28670688   PMID:28676689   PMID:28685820   PMID:28714991   PMID:28723561   PMID:28733471   PMID:28738016  
PMID:28742882   PMID:28747348   PMID:28750075   PMID:28754678   PMID:28759003   PMID:28768723   PMID:28778586   PMID:28783152   PMID:28783695   PMID:28819166   PMID:28827353   PMID:28835458  
PMID:28839093   PMID:28844693   PMID:28847007   PMID:28850267   PMID:28855737   PMID:28874534   PMID:28877454   PMID:28886380   PMID:28886898   PMID:28887367   PMID:28889947   PMID:28889989  
PMID:28892065   PMID:28892470   PMID:28892471   PMID:28894001   PMID:28917953   PMID:28930662   PMID:28935958   PMID:28939758   PMID:28942366   PMID:28978473   PMID:28978474   PMID:29018225  
PMID:29021375   PMID:29038367   PMID:29045828   PMID:29045902   PMID:29048538   PMID:29050936   PMID:29050947   PMID:29066577   PMID:29069606   PMID:29091929   PMID:29093061   PMID:29109123  
PMID:29109251   PMID:29124314   PMID:29127150   PMID:29141216   PMID:29141218   PMID:29158374   PMID:29166588   PMID:29166616   PMID:29171836   PMID:29180394   PMID:29196657   PMID:29213081  
PMID:29221730   PMID:29239722   PMID:29246441   PMID:29263148   PMID:29269391   PMID:29282307   PMID:29321275   PMID:29339447   PMID:29343435   PMID:29346764   PMID:29364878   PMID:29366602  
PMID:29371232   PMID:29378778   PMID:29414937   PMID:29420746   PMID:29425339   PMID:29434354   PMID:29436411   PMID:29440353   PMID:29440380   PMID:29453398   PMID:29456534   PMID:29459403  
PMID:29476012   PMID:29500225   PMID:29507226   PMID:29523590   PMID:29531164   PMID:29545616   PMID:29588316   PMID:29602773   PMID:29604048   PMID:29611641   PMID:29614127   PMID:29661826  
PMID:29662170   PMID:29669285   PMID:29686684   PMID:29703862   PMID:29743314   PMID:29752065   PMID:29773643   PMID:29773655   PMID:29844370   PMID:29858010   PMID:29866800   PMID:29884702  
PMID:29887374   PMID:29894689   PMID:29894690   PMID:29898397   PMID:29898965   PMID:29930104   PMID:29941474   PMID:29980582   PMID:29982622   PMID:29991500   PMID:29991564   PMID:29992549  
PMID:29997123   PMID:30003817   PMID:30007439   PMID:30021159   PMID:30022086   PMID:30038387   PMID:30089271   PMID:30115741   PMID:30190287   PMID:30209190   PMID:30282028   PMID:30291029  
PMID:30323813   PMID:30348891   PMID:30355617   PMID:30359308   PMID:30364052   PMID:30367168   PMID:30374130   PMID:30380412   PMID:30392957   PMID:30413360   PMID:30413362   PMID:30446386  
PMID:30446566   PMID:30485807   PMID:30498033   PMID:30510991   PMID:30523076   PMID:30550561   PMID:30559442   PMID:30560927   PMID:30590032   PMID:30626970   PMID:30639036   PMID:30642977  
PMID:30643147   PMID:30643266   PMID:30664665   PMID:30674536   PMID:30696763   PMID:30705058   PMID:30709738   PMID:30712258   PMID:30726915   PMID:30733194   PMID:30753170   PMID:30759395  
PMID:30765734   PMID:30770822   PMID:30779711   PMID:30800128   PMID:30824323   PMID:30833563   PMID:30837262   PMID:30842776   PMID:30843874   PMID:30850474   PMID:30856173   PMID:30862784  
PMID:30886050   PMID:30893588   PMID:30910863   PMID:30913039   PMID:30917315   PMID:30927737   PMID:30929511   PMID:30936873   PMID:30938680   PMID:30941146   PMID:30943404   PMID:30962454  
PMID:30992496   PMID:31000202   PMID:31010850   PMID:31013255   PMID:31017652   PMID:31018134   PMID:31027998   PMID:31043609   PMID:31053654   PMID:31068947   PMID:31070504   PMID:31085588  
PMID:31120919   PMID:31121182   PMID:31125332   PMID:31127789   PMID:31132747   PMID:31138793   PMID:31149632   PMID:31165767   PMID:31167140   PMID:31167776   PMID:31182480   PMID:31189717  
PMID:31201238   PMID:31209730   PMID:31216480   PMID:31235962   PMID:31249570   PMID:31269437   PMID:31269441   PMID:31296356   PMID:31311828   PMID:31311918   PMID:31350177   PMID:31362003  
PMID:31371561   PMID:31387873   PMID:31399516   PMID:31434685   PMID:31457080   PMID:31457081   PMID:31515281   PMID:31545427   PMID:31553906   PMID:31563695   PMID:31572375   PMID:31580477  
PMID:31616418   PMID:31647813   PMID:31649036   PMID:31652947   PMID:31664129   PMID:31713233   PMID:31722202   PMID:31729760   PMID:31776512   PMID:31792183   PMID:31801068   PMID:31844326  
PMID:31852848   PMID:31857584   PMID:31875848   PMID:31880771   PMID:31909202   PMID:31911451   PMID:31911938   PMID:31924652   PMID:31937752   PMID:31968240   PMID:31995749   PMID:32015231  
PMID:32024640   PMID:32049019   PMID:32066953   PMID:32152316   PMID:32184325   PMID:32198145   PMID:32294406   PMID:32389178   PMID:32414808   PMID:32414925   PMID:32451418   PMID:32461639  
PMID:32471185   PMID:32493841   PMID:32499641   PMID:32615085   PMID:32620760   PMID:32640256   PMID:32644293   PMID:32667911   PMID:32707034   PMID:32729205   PMID:32738205   PMID:32790649  
PMID:32820125   PMID:32839608   PMID:32948683   PMID:33020214   PMID:33087934   PMID:33139491   PMID:33168576   PMID:33238123   PMID:33296659   PMID:33472908   PMID:33523441   PMID:33838102  


Genomics

Comparative Map Data
Foxp3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X7,445,915 - 7,461,482 (+)NCBIGRCm39mm39
GRCm39 EnsemblX7,439,883 - 7,461,484 (+)Ensembl
GRCm38X7,579,676 - 7,595,243 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX7,573,644 - 7,595,245 (+)EnsemblGRCm38mm10GRCm38
MGSCv37X7,156,819 - 7,172,360 (+)NCBIGRCm37mm9NCBIm37
MGSCv36X6,736,652 - 6,752,193 (+)NCBImm8
CeleraX3,876,537 - 3,892,077 (-)NCBICelera
Cytogenetic MapXA1.1NCBI
cM MapX3.41NCBI
FOXP3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 EnsemblX49,250,438 - 49,270,477 (-)EnsemblGRCh38hg38GRCh38
GRCh38X49,250,436 - 49,264,932 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37X49,106,899 - 49,121,172 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36X48,994,354 - 49,008,232 (-)NCBINCBI36hg18NCBI36
Build 34X48,863,780 - 48,877,659NCBI
CeleraX52,543,105 - 52,557,472 (+)NCBI
Cytogenetic MapXp11.23NCBI
HuRefX46,763,332 - 46,777,541 (-)NCBIHuRef
CHM1_1X49,139,199 - 49,153,588 (-)NCBICHM1_1
Foxp3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2X14,908,494 - 14,924,994 (-)NCBI
Rnor_6.0 EnsemblX15,753,175 - 15,768,522 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0X15,753,175 - 15,768,648 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0X16,544,710 - 16,565,562 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X26,950,006 - 26,965,329 (-)NCBIRGSC3.4rn4RGSC3.4
CeleraX14,991,861 - 15,007,179 (-)NCBICelera
Cytogenetic MapXq12NCBI
Foxp3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955543731,707 - 742,606 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955543731,707 - 742,606 (-)NCBIChiLan1.0ChiLan1.0
FOXP3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1X49,402,652 - 49,417,029 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX49,402,652 - 49,417,029 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0X41,550,462 - 41,567,492 (-)NCBIMhudiblu_PPA_v0panPan3
FOXP3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X42,331,229 - 42,362,841 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX42,344,108 - 42,350,758 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX16,722,772 - 16,729,421 (-)NCBI
ROS_Cfam_1.0X42,484,818 - 42,504,672 (-)NCBI
UMICH_Zoey_3.1X42,469,693 - 42,476,343 (-)NCBI
UNSW_CanFamBas_1.0X42,457,152 - 42,463,801 (-)NCBI
UU_Cfam_GSD_1.0X42,552,106 - 42,558,755 (-)NCBI
Foxp3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X34,877,987 - 34,897,169 (-)NCBI
SpeTri2.0NW_0049367211,118,376 - 1,125,282 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FOXP3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX43,303,782 - 43,328,735 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X43,303,777 - 43,328,164 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X48,151,901 - 48,175,580 (-)NCBISscrofa10.2Sscrofa10.2susScr3
FOXP3
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X46,349,890 - 46,365,133 (-)NCBI
Vero_WHO_p1.0NW_02366607611,912,136 - 11,927,083 (-)NCBI
Foxp3
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624893995,145 - 1,008,492 (-)NCBI

Position Markers
AI481216  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38X7,593,876 - 7,593,997UniSTSGRCm38
MGSCv37X7,171,002 - 7,171,123UniSTSGRCm37
CeleraX3,877,774 - 3,877,895UniSTS
Cytogenetic MapXA1.1UniSTS
Whitehead/MRC_RHX31.14UniSTS
RH136802  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38X7,593,919 - 7,594,061UniSTSGRCm38
MGSCv37X7,171,045 - 7,171,187UniSTSGRCm37
CeleraX3,877,710 - 3,877,852UniSTS
Cytogenetic MapXA1.1UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1302195Pbwg10_mpostnatal body weight growth 10 (mouse)Not determinedX126335934Mouse
1357433Dbts2_mdiabetes 2 (mouse)Not determinedX7360056151324042Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:5116
Count of miRNA genes:723
Interacting mature miRNAs:911
Transcripts:ENSMUST00000045566, ENSMUST00000115738, ENSMUST00000115739, ENSMUST00000115740
Prediction methods:Miranda, Pita, Pita,Targetscan, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001199347 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001199348 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_054039 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB673115 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF277991 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF277992 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF277994 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK157447 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK210240 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK212556 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK216372 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL672231 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL731793 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY357712 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY357713 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC132333 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC132335 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466638 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ387959 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KF471319 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000045566   ⟹   ENSMUSP00000041953
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 EnsemblX7,586,273 - 7,595,243 (+)Ensembl
RefSeq Acc Id: ENSMUST00000115738   ⟹   ENSMUSP00000111403
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 EnsemblX7,580,483 - 7,595,234 (+)Ensembl
RefSeq Acc Id: ENSMUST00000115739   ⟹   ENSMUSP00000111404
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 EnsemblX7,579,669 - 7,595,234 (+)Ensembl
RefSeq Acc Id: ENSMUST00000115740   ⟹   ENSMUSP00000111405
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 EnsemblX7,579,676 - 7,595,245 (+)Ensembl
RefSeq Acc Id: ENSMUST00000234015   ⟹   ENSMUSP00000157266
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 EnsemblX7,586,355 - 7,593,048 (+)Ensembl
RefSeq Acc Id: ENSMUST00000234363   ⟹   ENSMUSP00000157093
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 EnsemblX7,579,567 - 7,593,799 (+)Ensembl
RefSeq Acc Id: ENSMUST00000234479   ⟹   ENSMUSP00000157242
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 EnsemblX7,579,669 - 7,593,105 (+)Ensembl
RefSeq Acc Id: ENSMUST00000234574   ⟹   ENSMUSP00000157007
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 EnsemblX7,579,676 - 7,593,264 (+)Ensembl
RefSeq Acc Id: ENSMUST00000234896   ⟹   ENSMUSP00000157243
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 EnsemblX7,573,644 - 7,586,518 (+)Ensembl
RefSeq Acc Id: ENSMUST00000235116   ⟹   ENSMUSP00000157059
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 EnsemblX7,579,669 - 7,593,105 (+)Ensembl
RefSeq Acc Id: NM_001199347   ⟹   NP_001186276
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X7,445,915 - 7,461,482 (+)NCBI
GRCm38X7,579,676 - 7,595,243 (+)ENTREZGENE
CeleraX3,876,528 - 3,892,094 (-)ENTREZGENE
cM MapX ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001199348   ⟹   NP_001186277
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X7,446,722 - 7,461,482 (+)NCBI
GRCm38X7,580,483 - 7,595,243 (+)NCBI
CeleraX3,876,528 - 3,892,094 (-)ENTREZGENE
cM MapX ENTREZGENE
Sequence:
RefSeq Acc Id: NM_054039   ⟹   NP_473380
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X7,445,915 - 7,461,482 (+)NCBI
GRCm38X7,579,676 - 7,595,243 (+)ENTREZGENE
MGSCv37X7,156,819 - 7,172,360 (+)RGD
CeleraX3,876,528 - 3,892,094 (-)ENTREZGENE
cM MapX ENTREZGENE
Sequence:
Reference Sequences
RefSeq Acc Id: NP_473380   ⟸   NM_054039
- UniProtKB: Q99JB6 (UniProtKB/Swiss-Prot),   Q53Z59 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001186276   ⟸   NM_001199347
- UniProtKB: Q99JB6 (UniProtKB/Swiss-Prot),   Q53Z59 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001186277   ⟸   NM_001199348
- UniProtKB: Q99JB6 (UniProtKB/Swiss-Prot),   Q53Z59 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000041953   ⟸   ENSMUST00000045566
RefSeq Acc Id: ENSMUSP00000111403   ⟸   ENSMUST00000115738
RefSeq Acc Id: ENSMUSP00000111404   ⟸   ENSMUST00000115739
RefSeq Acc Id: ENSMUSP00000111405   ⟸   ENSMUST00000115740
RefSeq Acc Id: ENSMUSP00000157059   ⟸   ENSMUST00000235116
RefSeq Acc Id: ENSMUSP00000157243   ⟸   ENSMUST00000234896
RefSeq Acc Id: ENSMUSP00000157242   ⟸   ENSMUST00000234479
RefSeq Acc Id: ENSMUSP00000157093   ⟸   ENSMUST00000234363
RefSeq Acc Id: ENSMUSP00000157007   ⟸   ENSMUST00000234574
RefSeq Acc Id: ENSMUSP00000157266   ⟸   ENSMUST00000234015
Protein Domains
C2H2-type   Fork-head

Promoters
RGD ID:6845725
Promoter ID:MM_KWN:59404
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:ENSMUST00000115740,   NM_054039
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36X7,155,781 - 7,156,281 (+)MPROMDB
RGD ID:6845722
Promoter ID:MM_KWN:59405
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   Brain,   MEF_B6
Transcripts:ENSMUST00000115738
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36X7,157,076 - 7,157,627 (+)MPROMDB
RGD ID:6845719
Promoter ID:MM_KWN:59406
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   Lung
Transcripts:ENSMUST00000045566
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36X7,162,676 - 7,163,877 (+)MPROMDB
RGD ID:13679966
Promoter ID:EPDNEW_M24132
Type:multiple initiation site
Name:Foxp3_1
Description:Mus musculus forkhead box P3 , transcript variant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M24133  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38X7,579,676 - 7,579,736EPDNEW
RGD ID:13679968
Promoter ID:EPDNEW_M24133
Type:initiation region
Name:Foxp3_2
Description:Mus musculus forkhead box P3 , transcript variant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M24132  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38X7,580,511 - 7,580,571EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1891436 AgrOrtholog
Ensembl Genes ENSMUSG00000039521 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000041953 UniProtKB/Swiss-Prot
  ENSMUSP00000111403 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000111404 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000111405 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000157007 UniProtKB/TrEMBL
  ENSMUSP00000157059 UniProtKB/Swiss-Prot
  ENSMUSP00000157093 UniProtKB/Swiss-Prot
  ENSMUSP00000157242 UniProtKB/TrEMBL
  ENSMUSP00000157243 UniProtKB/TrEMBL
  ENSMUSP00000157266 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000045566 UniProtKB/Swiss-Prot
  ENSMUST00000115738 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000115739 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000115740 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000234015 UniProtKB/TrEMBL
  ENSMUST00000234363 UniProtKB/Swiss-Prot
  ENSMUST00000234479 UniProtKB/TrEMBL
  ENSMUST00000234574 UniProtKB/TrEMBL
  ENSMUST00000234896 UniProtKB/TrEMBL
  ENSMUST00000235116 UniProtKB/Swiss-Prot
Gene3D-CATH 1.10.10.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Fork_head_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FOXP-CC UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TF_fork_head_CS_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WH-like_DNA-bd_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WH_DNA-bd_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_C2H2_type UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:20371 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1891436 ENTREZGENE
NCBI Gene 20371 ENTREZGENE
Pfam Forkhead UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FOXP-CC UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Foxp3 PhenoGen
PRINTS FORKHEAD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE FORK_HEAD_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FORK_HEAD_3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART SM00339 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF46785 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A3Q4EC35_MOUSE UniProtKB/TrEMBL
  A0A3Q4EC46_MOUSE UniProtKB/TrEMBL
  A0A3Q4EI60_MOUSE UniProtKB/TrEMBL
  A0A3Q4L2R0_MOUSE UniProtKB/TrEMBL
  FOXP3_MOUSE UniProtKB/Swiss-Prot
  Q53Z59 ENTREZGENE, UniProtKB/TrEMBL
  Q99JB6 ENTREZGENE
  V5LWQ0_MOUSE UniProtKB/TrEMBL