Atf2 (activating transcription factor 2) - Rat Genome Database

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Gene: Atf2 (activating transcription factor 2) Mus musculus
Analyze
Symbol: Atf2
Name: activating transcription factor 2
RGD ID: 736761
MGI Page MGI
Description: Enables several functions, including DNA-binding transcription activator activity, RNA polymerase II-specific; cAMP response element binding activity; and protein dimerization activity. Involved in several processes, including growth plate cartilage development; hindbrain development; and intracellular signal transduction. Acts upstream of or within with a positive effect on cellular response to leucine starvation and regulation of transcription by RNA polymerase II. Acts upstream of or within several processes, including adipose tissue development; brown fat cell proliferation; and positive regulation of transforming growth factor beta2 production. Located in membrane; nucleus; and site of double-strand break. Is expressed in several structures, including alimentary system; brain; eye; genitourinary system; and limb. Used to study meconium aspiration syndrome and osteochondrodysplasia. Orthologous to human ATF2 (activating transcription factor 2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: ATF-; Atf-2; cAMP response element-binding protein CRE-BP1; cAMP-dependent transcription factor ATF-2; CRE-; CRE-BP; Creb; Creb2; cyclic AMP-dependent transcription factor ATF-2; D130078H02Rik; D18875; MGC105211; MGC105222; mXB; mXBP; Tg(Gzma-Klra1)7Wum
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39273,646,853 - 73,723,094 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl273,646,853 - 73,722,983 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm38273,816,509 - 73,892,677 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl273,816,509 - 73,892,639 (-)Ensemblmm10GRCm38
MGSCv37273,654,578 - 73,730,685 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36273,617,360 - 73,693,467 (-)NCBIMGSCv36mm8
Celera275,503,543 - 75,579,494 (-)NCBICelera
Cytogenetic Map2C3NCBI
cM Map243.86NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-catechin  (EXP)
(+)-pilocarpine  (ISO)
(+)-Pimaric acid  (ISO)
(-)-anisomycin  (EXP,ISO)
(R,R,R)-alpha-tocopherol  (ISO)
(S)-amphetamine  (ISO)
1,2-dimethylhydrazine  (EXP)
17alpha-ethynylestradiol  (EXP,ISO)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-aminobiphenyl  (ISO)
2-ethoxyethanol  (ISO)
2-hydroxypropanoic acid  (ISO)
2-methoxyethanol  (ISO)
3,4-methylenedioxymethamphetamine  (EXP)
4-(ethoxymethylene)-2-phenyloxazol-5-one  (ISO)
5-Nitro-2-(3-phenylpropylamino)benzoic acid  (EXP)
6-propyl-2-thiouracil  (ISO)
acetamide  (ISO)
acrolein  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (EXP)
alpha-pinene  (ISO)
ammonium chloride  (ISO)
andrographolide  (ISO)
anthra[1,9-cd]pyrazol-6(2H)-one  (EXP,ISO)
apocynin  (ISO)
arachidonic acid  (ISO)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenous acid  (ISO)
atrazine  (ISO)
baicalin  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
bis(2-chloroethyl) sulfide  (EXP)
bisphenol A  (ISO)
bisphenol F  (EXP)
bortezomib  (ISO)
bucladesine  (ISO)
cadmium dichloride  (EXP)
cadmium sulfate  (EXP)
capsaicin  (EXP)
carbamazepine  (ISO)
carbon nanotube  (EXP)
chlorpyrifos  (EXP)
choline  (EXP)
chromium trioxide  (ISO)
chromium(6+)  (EXP)
cisplatin  (EXP,ISO)
cobalt dichloride  (ISO)
copper atom  (EXP,ISO)
copper(0)  (EXP,ISO)
copper(II) chloride  (EXP)
copper(II) sulfate  (ISO)
coumestrol  (ISO)
crocidolite asbestos  (EXP,ISO)
curcumin  (ISO)
cyclophosphamide  (ISO)
cyclosporin A  (ISO)
deoxynivalenol  (EXP,ISO)
diarsenic trioxide  (ISO)
dibenziodolium  (EXP)
dibromoacetic acid  (EXP)
dichlorine  (ISO)
diclofenac  (ISO)
dicrotophos  (ISO)
diethylstilbestrol  (ISO)
disulfiram  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
doxycycline  (EXP)
enalapril  (ISO)
ethanol  (EXP)
etoposide  (ISO)
folic acid  (EXP)
FR900359  (ISO)
fulvestrant  (ISO)
genistein  (ISO)
gingerol  (EXP)
Goe 6976  (ISO)
GSK-J4  (ISO)
hexadecanoic acid  (ISO)
hydrogen peroxide  (ISO)
hydrogen sulfide  (EXP)
hydroquinone  (ISO)
indometacin  (ISO)
isoprenaline  (EXP)
isotretinoin  (EXP)
KT 5720  (ISO)
L-methionine  (EXP)
L-serine  (EXP)
lead(0)  (ISO)
linalool  (ISO)
lipopolysaccharide  (EXP,ISO)
lithium atom  (ISO)
lithium hydride  (ISO)
manganese(II) chloride  (ISO)
melatonin  (ISO)
methimazole  (ISO)
methotrexate  (ISO)
methyl beta-cyclodextrin  (ISO)
methyl methanesulfonate  (ISO)
methylmercury chloride  (EXP)
methylseleninic acid  (ISO)
mevinphos  (ISO)
microcystin-LR  (ISO)
mono(2-ethylhexyl) phthalate  (EXP)
N(4)-hydroxycytidine  (EXP)
N-acetyl-L-cysteine  (EXP,ISO)
N-nitrosodiethylamine  (EXP)
nickel dichloride  (EXP)
oxaliplatin  (ISO)
oxybenzone  (ISO)
ozone  (ISO)
perfluorodecanoic acid  (EXP)
perfluorooctane-1-sulfonic acid  (EXP,ISO)
phenylarsine oxide  (ISO)
piperine  (ISO)
piperonyl butoxide  (EXP)
pterostilbene  (ISO)
quercetin  (ISO)
rac-lactic acid  (ISO)
resveratrol  (ISO)
SB 203580  (EXP,ISO)
SB 431542  (ISO)
selenomethionine  (ISO)
sertraline  (ISO)
sevoflurane  (ISO)
simvastatin  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (EXP,ISO)
sodium benzoate  (EXP)
streptozocin  (ISO)
succimer  (EXP)
sulfadimethoxine  (ISO)
tamoxifen  (EXP,ISO)
testosterone  (EXP)
tetrachloromethane  (EXP,ISO)
thioacetamide  (ISO)
titanium dioxide  (EXP)
tributylstannane  (ISO)
trichostatin A  (ISO)
triphenyl phosphate  (ISO)
triptonide  (EXP)
trovafloxacin  (EXP)
valproic acid  (ISO)
vanadyl sulfate  (ISO)
vinclozolin  (ISO)
vitamin E  (ISO)
wortmannin  (ISO)
zinc atom  (EXP)
zinc dichloride  (EXP)
zinc sulfate  (ISO)
zinc(0)  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
abducens nucleus development  (IMP)
adipose tissue development  (IGI)
amelogenesis  (ISO)
apoptotic process  (IMP)
BMP signaling pathway  (IMP)
brainstem development  (IMP)
cellular response to anisomycin  (IDA,IMP)
cellular response to leucine starvation  (IEA,IMP)
cellular response to oxidative stress  (IMP)
cellular response to virus  (IDA)
detection of cell density  (IMP)
DNA damage response  (IEA,IMP,ISO,ISS)
facial nucleus development  (IMP)
fat cell differentiation  (IGI)
gene expression  (IMP)
growth plate cartilage chondrocyte differentiation  (IMP)
growth plate cartilage chondrocyte proliferation  (IMP)
heart development  (IGI)
hematopoietic progenitor cell differentiation  (IGI)
hepatocyte apoptotic process  (IGI)
hypoglossal nucleus development  (IMP)
in utero embryonic development  (IGI,IMP)
intrinsic apoptotic signaling pathway in response to hypoxia  (IMP)
JNK cascade  (IMP)
lipid metabolic process  (IMP)
liver development  (IGI)
MAPK cascade  (IMP)
mitotic intra-S DNA damage checkpoint signaling  (IEA,ISO,ISS)
motor neuron apoptotic process  (IMP)
mRNA transcription by RNA polymerase II  (IMP)
negative regulation of angiogenesis  (IEA,ISO)
negative regulation of epithelial cell proliferation  (ISO)
negative regulation of transcription by RNA polymerase II  (ISO)
neurofilament cytoskeleton organization  (IMP)
NK T cell differentiation  (IMP)
outflow tract morphogenesis  (IMP)
p38MAPK cascade  (IGI,IMP)
peptidyl-threonine phosphorylation  (ISO)
positive regulation of cardiac muscle myoblast proliferation  (IEA,ISO)
positive regulation of DNA-binding transcription factor activity  (ISO,ISS)
positive regulation of gene expression  (IEA,ISO)
positive regulation of mitochondrial membrane permeability involved in apoptotic process  (IEA,ISO,ISS)
positive regulation of neuron apoptotic process  (ISO)
positive regulation of protein phosphorylation  (IMP)
positive regulation of transcription by RNA polymerase II  (IDA,IEA,IGI,IMP,ISO)
positive regulation of transforming growth factor beta2 production  (IMP)
protein import into nucleus  (IDA)
regulation of DNA-templated transcription  (IEA,ISO,ISS)
regulation of transcription by RNA polymerase II  (IBA,IDA,IEA,ISO)
response to osmotic stress  (IEA,ISO,ISS)
transcription initiation-coupled chromatin remodeling  (IEA,ISO)
vacuole organization  (IMP)
white fat cell differentiation  (IGI,IMP)

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal artery development  (IAGP)
abnormal cell differentiation  (IAGP)
abnormal chondrocyte morphology  (IAGP)
abnormal common myeloid progenitor cell morphology  (IAGP)
abnormal cytokine secretion  (IAGP)
abnormal heart morphology  (IEA)
abnormal kidney morphology  (IEA)
abnormal liver morphology  (IAGP)
abnormal long bone epiphyseal plate morphology  (IAGP)
abnormal lung morphology  (IAGP)
abnormal NK cell physiology  (IAGP)
abnormal placenta labyrinth morphology  (IAGP)
abnormal placenta vasculature  (IAGP)
abnormal skin morphology  (IEA)
abnormal spleen morphology  (IEA)
abnormal testis morphology  (IEA)
abnormal urinary bladder morphology  (IEA)
abnormal utricular macula morphology  (IAGP)
abnormal vestibular ganglion morphology  (IAGP)
abnormal vestibular saccular macula morphology  (IAGP)
anemia  (IAGP)
ataxia  (IAGP)
chondrodystrophy  (IAGP)
cyanosis  (IAGP)
decreased body weight  (IAGP)
decreased brain size  (IAGP)
decreased cell proliferation  (IAGP)
decreased circulating chloride level  (IEA)
decreased circulating interferon-gamma level  (IAGP)
decreased long bone epiphyseal plate size  (IAGP)
decreased mean platelet volume  (IEA)
decreased NK cell number  (IAGP)
decreased NK T cell number  (IAGP)
decreased otolith number  (IAGP)
decreased Purkinje cell number  (IAGP)
decreased subcutaneous adipose tissue amount  (IAGP)
decreased vestibular hair cell number  (IAGP)
decreased vestibular hair cell stereocilia number  (IAGP)
decreased white adipose tissue amount  (IAGP)
decreased white fat cell size  (IAGP)
disorganized long bone epiphyseal plate  (IAGP)
ectopic Purkinje cell  (IAGP)
embryonic growth arrest  (IAGP)
embryonic growth retardation  (IAGP)
embryonic lethality during organogenesis, complete penetrance  (IAGP)
enlarged brain ventricles  (IAGP)
enlarged heart  (IEA)
epidermal hyperplasia  (IAGP)
eye inflammation  (IAGP)
head shaking  (IAGP)
head tossing  (IAGP)
heart hypoplasia  (IAGP)
hemopericardium  (IAGP)
hyperactivity  (IAGP)
hypoxia  (IAGP)
impaired hearing  (IAGP)
impaired limb coordination  (IAGP)
improved glucose tolerance  (IAGP)
increased apoptosis  (IAGP)
increased blood urea nitrogen level  (IEA)
increased circulating potassium level  (IEA)
increased fasting circulating glucose level  (IEA)
increased hepatocyte apoptosis  (IAGP)
increased insulin sensitivity  (IAGP)
increased metastatic potential  (IAGP)
increased oxygen consumption  (IAGP)
increased skin papilloma incidence  (IAGP)
increased susceptibility to bacterial infection  (IAGP)
increased susceptibility to endotoxin shock  (IAGP)
increased susceptibility to Herpesvirales infection  (IAGP)
increased susceptibility to Picornaviridae infection  (IAGP)
liver hypoplasia  (IAGP)
neonatal lethality, complete penetrance  (IAGP)
no abnormal phenotype detected  (IAGP)
postnatal lethality  (IAGP)
postnatal lethality, incomplete penetrance  (IAGP)
proportional dwarf  (IAGP)
respiratory failure  (IAGP)
rhizomelic limb  (IAGP)
small testis  (IEA)
thick epidermis  (IAGP)
tremors  (IAGP)
References

References - curated
# Reference Title Reference Citation
1. Inhibitory effect of baicalin on iNOS and NO expression in intestinal mucosa of rats with acute endotoxemia. Feng A, etal., PLoS One. 2013 Dec 2;8(12):e80997. doi: 10.1371/journal.pone.0080997. eCollection 2013.
2. Berberine hydrochloride attenuates cyclooxygenase-2 expression in rat small intestinal mucosa during acute endotoxemia. Feng AW, etal., Fitoterapia. 2011 May 27.
3. Activation of cardiac c-Jun NH(2)-terminal kinases and p38-mitogen-activated protein kinases with abrupt changes in hemodynamic load. Fischer TA, etal., Hypertension. 2001 May;37(5):1222-8.
4. Mouse brain organization revealed through direct genome-scale TF expression analysis. Gray PA, etal., Science 2004 Dec 24;306(5705):2255-7.
5. Persistent phosphorylation of cyclic AMP responsive element-binding protein and activating transcription factor-2 transcription factors following transient cerebral ischemia in rat brain. Hu BR, etal., Neuroscience. 1999 Mar;89(2):437-52.
6. Co-expression of c-Jun and ATF-2 characterizes the surviving retinal ganglion cells which maintain axonal connections after partial optic nerve injury. Kreutz MR, etal., Brain Res Mol Brain Res. 1999 Jun 8;69(2):232-41.
7. Increased levels of transcription factors Elk-1, cyclic adenosine monophosphate response element-binding protein, and activating transcription factor 2 in the cerebellar vermis of schizophrenic patients. Kyosseva SV, etal., Arch Gen Psychiatry. 2000 Jul;57(7):685-91.
8. Regulation of cell death and survival pathways in experimental glaucoma. Levkovitch-Verbin H, etal., Exp Eye Res. 2007 Aug;85(2):250-8. Epub 2007 May 13.
9. Rapid and long-lasting suppression of the ATF-2 transcription factor is a common response to neuronal injury. Martin-Villalba A, etal., Brain Res Mol Brain Res. 1998 Nov 20;62(2):158-66.
10. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
11. MGDs mouse GO annotations MGD data from the GO Consortium
12. MGD IEA MGD IEA
13. Expression of transcription factors c-Fos, c-Jun, CREB-1 and ATF-2, and caspase-3 in relation with abnormal tau deposits in Pick's disease. Nieto-Bodelon M, etal., Acta Neuropathol. 2006 Apr;111(4):341-50. Epub 2006 Feb 23.
14. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
15. Activating transcription factor 2 expression in the adult human brain: association with both neurodegeneration and neurogenesis. Pearson AG, etal., Neuroscience. 2005;133(2):437-51.
16. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
17. PID Annotation Import Pipeline Pipeline to import Pathway Interaction Database annotations from NCI into RGD
18. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
19. Mouse MP Annotation Import Pipeline RGD automated import pipeline
20. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
21. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
22. Expression of activating transcription factor-2 (ATF-2), one of the cyclic AMP response element (CRE) binding proteins, in Alzheimer disease and non-neurological brain tissues. Yamada T, etal., Brain Res. 1997 Feb 28;749(2):329-34.
Additional References at PubMed
PMID:1531087   PMID:1531847   PMID:2138707   PMID:2516827   PMID:7774816   PMID:7972056   PMID:8538792   PMID:8703044   PMID:8798441   PMID:9058782   PMID:9488727   PMID:9524124  
PMID:9748258   PMID:9858769   PMID:10327051   PMID:10349636   PMID:10364225   PMID:10694580   PMID:10781615   PMID:10885750   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11157857  
PMID:11217851   PMID:11231009   PMID:11471062   PMID:11544199   PMID:12052888   PMID:12125072   PMID:12149242   PMID:12208865   PMID:12215258   PMID:12220541   PMID:12477932   PMID:12520002  
PMID:12904583   PMID:14607778   PMID:14610273   PMID:14630918   PMID:15030387   PMID:15192015   PMID:15226823   PMID:15304344   PMID:15350216   PMID:15371457   PMID:15479644   PMID:15574764  
PMID:15665819   PMID:15735648   PMID:15735649   PMID:15735738   PMID:15767678   PMID:15782199   PMID:15916964   PMID:15964791   PMID:16049073   PMID:16141072   PMID:16141073   PMID:16223777  
PMID:16405968   PMID:16565492   PMID:16751104   PMID:17177285   PMID:17189429   PMID:17219413   PMID:17267404   PMID:17371949   PMID:17500068   PMID:17604094   PMID:17699753   PMID:17700520  
PMID:17717295   PMID:17767158   PMID:17875933   PMID:17896792   PMID:18023262   PMID:18083014   PMID:18227516   PMID:18228000   PMID:18287559   PMID:18322234   PMID:18387947   PMID:18638549  
PMID:18664585   PMID:18719024   PMID:18799693   PMID:18802055   PMID:19176525   PMID:19258505   PMID:19422799   PMID:19584270   PMID:19647037   PMID:19712269   PMID:19793891   PMID:19822663  
PMID:19948881   PMID:20018859   PMID:20059953   PMID:20211142   PMID:20362542   PMID:20412781   PMID:20507983   PMID:21203491   PMID:21267068   PMID:21278380   PMID:21367821   PMID:21533046  
PMID:21873635   PMID:22058413   PMID:22118467   PMID:22439931   PMID:22542937   PMID:22628303   PMID:22688338   PMID:22988430   PMID:23134724   PMID:23475960   PMID:23656735   PMID:23689131  
PMID:23712976   PMID:23776508   PMID:24013026   PMID:24194600   PMID:24338393   PMID:24352701   PMID:24952961   PMID:25063677   PMID:25456131   PMID:25600960   PMID:25963442   PMID:26173459  
PMID:26515688   PMID:26645581   PMID:27210757   PMID:27882945   PMID:28358847   PMID:28641113   PMID:29298863   PMID:30418981   PMID:30497386   PMID:30578393   PMID:30763583   PMID:31958521  
PMID:32385399   PMID:34107020   PMID:34798593   PMID:35303432   PMID:35855866   PMID:36809837   PMID:37973625   PMID:38355793  


Genomics

Comparative Map Data
Atf2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39273,646,853 - 73,723,094 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl273,646,853 - 73,722,983 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm38273,816,509 - 73,892,677 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl273,816,509 - 73,892,639 (-)Ensemblmm10GRCm38
MGSCv37273,654,578 - 73,730,685 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36273,617,360 - 73,693,467 (-)NCBIMGSCv36mm8
Celera275,503,543 - 75,579,494 (-)NCBICelera
Cytogenetic Map2C3NCBI
cM Map243.86NCBI
ATF2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382175,072,259 - 175,168,203 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2175,072,250 - 175,168,382 (-)Ensemblhg38GRCh38
GRCh372175,936,987 - 176,032,931 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362175,647,252 - 175,741,143 (-)NCBIBuild 36Build 36hg18NCBI36
Build 342175,764,514 - 175,858,404NCBI
Celera2169,552,560 - 169,646,448 (-)NCBICelera
Cytogenetic Map2q31.1NCBI
HuRef2167,817,672 - 167,913,976 (-)NCBIHuRef
CHM1_12175,942,954 - 176,038,909 (-)NCBICHM1_1
T2T-CHM13v2.02175,561,049 - 175,656,993 (-)NCBIT2T-CHM13v2.0
Atf2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8379,125,814 - 79,202,896 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl379,126,705 - 79,202,745 (-)EnsemblGRCr8
mRatBN7.2358,718,323 - 58,795,280 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl358,718,332 - 58,795,236 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx362,114,861 - 62,189,669 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0370,698,518 - 70,773,330 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0368,463,548 - 68,538,382 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0360,721,137 - 60,795,951 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl360,721,135 - 60,795,951 (-)Ensemblrn6Rnor6.0
Rnor_5.0367,199,880 - 67,274,694 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4356,403,676 - 56,496,473 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera358,247,269 - 58,321,865 (-)NCBICelera
RGSC_v3.1356,323,607 - 56,392,845 (-)NCBI
RH 3.4 Map5689.89RGD
Cytogenetic Map3q23NCBI
Atf2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955449338,193 - 411,218 (+)Ensembl
ChiLan1.0NW_004955449332,563 - 411,218 (+)NCBIChiLan1.0ChiLan1.0
ATF2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21377,735,869 - 77,832,175 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B77,750,835 - 77,847,150 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B62,348,245 - 62,444,428 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B179,799,362 - 179,895,007 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B179,799,365 - 179,895,007 (-)EnsemblpanPan2panpan1.1
ATF2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13619,032,376 - 19,103,382 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3619,010,717 - 19,103,292 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha3619,041,505 - 19,126,647 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.03619,170,174 - 19,255,411 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3619,149,065 - 19,255,418 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13619,246,271 - 19,331,371 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03619,244,588 - 19,329,566 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03619,355,712 - 19,440,684 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Atf2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303136,176,081 - 136,272,458 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365094,732,930 - 4,826,443 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365094,729,984 - 4,826,367 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ATF2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1580,985,126 - 81,081,014 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11580,984,969 - 81,076,573 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21590,260,285 - 90,303,424 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ATF2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11060,644,623 - 60,734,465 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1060,644,635 - 60,734,475 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_023666040138,879,027 - 138,969,502 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Atf2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462478712,241,838 - 12,338,089 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Atf2
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1551,170,000 - 51,246,336 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Atf2
2592 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:6522
Count of miRNA genes:819
Interacting mature miRNAs:1093
Transcripts:ENSMUST00000055833, ENSMUST00000090802, ENSMUST00000100009, ENSMUST00000112007, ENSMUST00000112010, ENSMUST00000112016, ENSMUST00000112017, ENSMUST00000124737, ENSMUST00000125159, ENSMUST00000128531, ENSMUST00000129555, ENSMUST00000136958, ENSMUST00000138098, ENSMUST00000141050, ENSMUST00000143714, ENSMUST00000154456, ENSMUST00000154965, ENSMUST00000156455, ENSMUST00000173010
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13464141Hbbcq3_mhemoglobin concentration QTL 3 (mouse)25244801986448136Mouse
13824983Vclq1_mcurvilinear velocity QTL 1 (mouse)261830344136841920Mouse
1301402Ap2q_malcohol preference 2 QTL (mouse)Not determined24352061277520756Mouse
1300761Lgth1_mbody length 1 (mouse)Not determined25170327685703425Mouse
4141236Hbnr5_mHeligmosomoides bakeri nematode resistance 5 (mouse)Not determined31214567105143570Mouse
1302174Dssc2_mdextran sodium sulfate induced colitis QTL2 (mouse)Not determined224224632148700377Mouse
1301405Etohr_methanol response acute (mouse)Not determined26300595497006113Mouse
1301660Iba1_minduction of brown adipocytes 1 (mouse)Not determined267647887101648142Mouse
1558915W3q1_mweight 3 weeks QTL 1 (mouse)Not determined220897778118894840Mouse
1300875Taste1_mtaste-saccharin preference 1 (mouse)Not determined25092317584923278Mouse
1301769Orgwq2_morgan weight QTL 2 (mouse)Not determined2388712693421651Mouse
1357454Kidq1_mkidney weight QTL 1 (mouse)Not determined220897778118894840Mouse
1357577Trmq3_mT cell ratio modifier QTL 3 (mouse)Not determined260520612119355518Mouse
1558966W10q9_mweight 10 weeks QTL 9 (mouse)Not determined220897778118894840Mouse
4141854T2dm2sa_mtype 2 diabetes mellitus 2 in SMXA RI mice (mouse)Not determined229307947148374934Mouse
1300662Etohila_methanol induced locomotor activity (mouse)Not determined26300595497006113Mouse
1300788Cia2_mcollagen induced arthritis QTL 2 (mouse)Not determined24352061277520756Mouse
10053681Lith24_mlithogenic gene 24 (mouse)Not determined26300595497006113Mouse
1301048Actre2_mactivity response to ethanol 2 (mouse)Not determined26300595497006113Mouse
1300671Cia4_mcollagen induced arthritis QTL 4 (mouse)Not determined24352061277520756Mouse
1357881Estoq1_membryo survival total QTL 1 (mouse)Not determined220897778118894840Mouse
5491197Mobq5_mmultigenic obesity QTL 5 (mouse)Not determined265269746162518926Mouse
1301948Elsgp3_melevated serum gp70 3 (mouse)Not determined268724269102724407Mouse
1301411Pitm1_mprion incubation time 1 (mouse)Not determined24352061277520756Mouse
4141069Pbwg1.5_mpostnatal body weight growth 1.5 (mouse)Not determined4352061277520756Mouse
1558820Moo1_mmodifier of Odc1 (mouse)Not determined174826974682269934Mouse
13432178Actres2_mactivity response to ethanol/saline 2 (mouse)26069228774092287Mouse
12738429Lfibq18_mliver fibrosis QTL 18 (mouse)25791999191919991Mouse
39128209Lwq14_mliver weight QTL 14 (mouse)220897778118894840Mouse
1558738W6q1_mweight 6 weeks QTL 1 (mouse)Not determined220897778118894840Mouse
11038703Ltpr1_mLeishmania tropica response 1 (mouse)23997166573971811Mouse
1300568Hdl1_mhigh density lipoprotein (HDL) level 1 (mouse)Not determined24826974682269934Mouse
1301059Hrtfm1_mheart failure modifier 1 (mouse)Not determined26759194074964933Mouse
1301703Bomd3_mbone mineral density 3 (mouse)Not determined26300595497006113Mouse
1301747Eae21_mexperimental allergic encephalomyelitis 21 (mouse)Not determined24826974682269934Mouse
1301235Alcw4_malcohol withdrawal 4 (mouse)Not determined24826974682269934Mouse
4141406Alpq2_malcohol preference QTL 2 (mouse)Not determined25752411791524288Mouse
10755526Lymph1_mlymphocyte differential 1 (mouse)25081931484819314Mouse
13463471Hctq6_mhematocrit QTL 6 (mouse)25244801986448136Mouse
1301873Hsl1_mhyperoxia susceptibility locus 1 (mouse)Not determined26357015497570301Mouse
1558899Egq1_mearly growth QTL 1 (mouse)Not determined220897778118894840Mouse
1357681Hrtq1_mheart weight QTL 1 (mouse)Not determined220897778118894840Mouse
1301109Dntcs2_mdental caries susceptibility 2 (mouse)Not determined240885493114910165Mouse
1357436Splq1_mspleen weight QTL 1 (mouse)Not determined220897778118894840Mouse
10755532Lymph5_mlymphocyte differential 5 (mouse)24419901778199017Mouse
1301882Etohc2_methanol consumption 2 (mouse)Not determined268724269102724407Mouse
11532740Pbwg1.10_mpostnatal body weight growth 1.10 (mouse)24813241282132495Mouse
1300577Capsq1_mcapsaicin sensitivity related QTL 1 (mouse)Not determined22760206084013384Mouse
1301344Lith1_mlithogenic gene 1 (mouse)Not determined245347635145312647Mouse
13463482Mchq17_mmean corpuscular hemoglobin QTL 17 (mouse)267647887101648142Mouse
1301480Pbwg1_mpostnatal body weight growth 1 (mouse)Not determined24182071975820843Mouse
10044002Hdl7_mHDL level 7 (mouse)Not determined26300595497006113Mouse

Markers in Region
SHGC-33561  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Celera4104,599,103 - 104,599,232UniSTS
Cytogenetic Map2C3UniSTS
D18875  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38273,816,629 - 73,816,775UniSTSGRCm38
MGSCv37273,654,686 - 73,654,832UniSTSGRCm37
Celera275,503,651 - 75,503,797UniSTS
Cytogenetic Map2C3UniSTS
Whitehead/MRC_RH21153.03UniSTS
RH142313  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38273,828,557 - 73,829,854UniSTSGRCm38
MGSCv37273,666,614 - 73,667,911UniSTSGRCm37
Celera4104,599,049 - 104,599,233UniSTS
Celera275,515,580 - 75,516,877UniSTS
Cytogenetic Map2C3UniSTS
Atf2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38273,817,603 - 73,817,666UniSTSGRCm38
MGSCv37273,655,660 - 73,655,723UniSTSGRCm37
Celera275,504,625 - 75,504,688UniSTS
Cytogenetic Map2C3UniSTS
cM Map2 UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001025093 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001284369 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001284370 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001284371 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001284372 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001284373 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001284374 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001284376 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_009715 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030246840 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030246841 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030246843 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030246844 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030246846 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030246847 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030246850 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030246853 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030246855 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030246858 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030246867 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030246872 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030246873 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036157691 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036157694 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036157700 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036157707 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036157708 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036157709 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036157711 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036157712 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036157713 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004937562 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AF483482 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF483483 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK035438 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK041145 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK046184 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK047405 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK051591 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK087424 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK139515 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK139844 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK140855 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK144977 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK145887 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK146839 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK218615 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL844581 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL845523 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY902311 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC042210 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC079883 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC082596 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC085137 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY474294 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466519 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M31629 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M77167 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  S76657 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  S76659 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U46026 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000055833   ⟹   ENSMUSP00000058521
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl273,646,853 - 73,722,958 (-)Ensembl
GRCm38.p6 Ensembl273,816,509 - 73,892,614 (-)Ensembl
Ensembl Acc Id: ENSMUST00000090802   ⟹   ENSMUSP00000088311
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl273,646,853 - 73,722,956 (-)Ensembl
GRCm38.p6 Ensembl273,816,509 - 73,892,612 (-)Ensembl
Ensembl Acc Id: ENSMUST00000100009   ⟹   ENSMUSP00000097588
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl273,646,868 - 73,693,634 (-)Ensembl
GRCm38.p6 Ensembl273,816,524 - 73,863,290 (-)Ensembl
Ensembl Acc Id: ENSMUST00000112007   ⟹   ENSMUSP00000107638
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl273,646,853 - 73,722,975 (-)Ensembl
GRCm38.p6 Ensembl273,816,509 - 73,892,631 (-)Ensembl
Ensembl Acc Id: ENSMUST00000112010   ⟹   ENSMUSP00000107641
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl273,646,853 - 73,722,880 (-)Ensembl
GRCm38.p6 Ensembl273,816,509 - 73,892,536 (-)Ensembl
Ensembl Acc Id: ENSMUST00000112016   ⟹   ENSMUSP00000107647
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl273,646,853 - 73,722,983 (-)Ensembl
GRCm38.p6 Ensembl273,816,509 - 73,892,639 (-)Ensembl
Ensembl Acc Id: ENSMUST00000112017   ⟹   ENSMUSP00000107648
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl273,648,610 - 73,722,899 (-)Ensembl
GRCm38.p6 Ensembl273,818,266 - 73,892,555 (-)Ensembl
Ensembl Acc Id: ENSMUST00000124737   ⟹   ENSMUSP00000114828
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl273,646,853 - 73,675,849 (-)Ensembl
GRCm38.p6 Ensembl273,816,509 - 73,845,505 (-)Ensembl
Ensembl Acc Id: ENSMUST00000125159
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl273,693,313 - 73,722,972 (-)Ensembl
GRCm38.p6 Ensembl273,862,969 - 73,892,628 (-)Ensembl
Ensembl Acc Id: ENSMUST00000128531   ⟹   ENSMUSP00000118560
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl273,675,784 - 73,722,897 (-)Ensembl
GRCm38.p6 Ensembl273,845,440 - 73,892,553 (-)Ensembl
Ensembl Acc Id: ENSMUST00000129555
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl273,676,078 - 73,680,948 (-)Ensembl
GRCm38.p6 Ensembl273,845,734 - 73,850,604 (-)Ensembl
Ensembl Acc Id: ENSMUST00000136958   ⟹   ENSMUSP00000118357
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl273,660,145 - 73,722,874 (-)Ensembl
GRCm38.p6 Ensembl273,829,801 - 73,892,530 (-)Ensembl
Ensembl Acc Id: ENSMUST00000138098
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl273,693,220 - 73,722,938 (-)Ensembl
GRCm38.p6 Ensembl273,862,876 - 73,892,594 (-)Ensembl
Ensembl Acc Id: ENSMUST00000141050
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl273,675,213 - 73,722,972 (-)Ensembl
GRCm38.p6 Ensembl273,844,869 - 73,892,628 (-)Ensembl
Ensembl Acc Id: ENSMUST00000143714
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl273,656,703 - 73,722,957 (-)Ensembl
GRCm38.p6 Ensembl273,826,359 - 73,892,613 (-)Ensembl
Ensembl Acc Id: ENSMUST00000154456   ⟹   ENSMUSP00000118719
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl273,675,783 - 73,722,937 (-)Ensembl
GRCm38.p6 Ensembl273,845,439 - 73,892,593 (-)Ensembl
Ensembl Acc Id: ENSMUST00000154965
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl273,703,618 - 73,722,894 (-)Ensembl
GRCm38.p6 Ensembl273,873,274 - 73,892,550 (-)Ensembl
Ensembl Acc Id: ENSMUST00000156455
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl273,646,864 - 73,722,972 (-)Ensembl
GRCm38.p6 Ensembl273,816,520 - 73,892,628 (-)Ensembl
Ensembl Acc Id: ENSMUST00000173010   ⟹   ENSMUSP00000133632
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl273,649,166 - 73,693,582 (-)Ensembl
GRCm38.p6 Ensembl273,818,822 - 73,863,238 (-)Ensembl
RefSeq Acc Id: NM_001025093   ⟹   NP_001020264
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39273,646,853 - 73,722,983 (-)NCBI
GRCm38273,816,509 - 73,892,639 (-)NCBI
MGSCv37273,654,578 - 73,730,685 (-)RGD
Celera275,503,531 - 75,579,505 (-)NCBI
cM Map2 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001284369   ⟹   NP_001271298
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39273,646,853 - 73,722,983 (-)NCBI
GRCm38273,816,509 - 73,892,639 (-)NCBI
Celera275,503,531 - 75,579,505 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001284370   ⟹   NP_001271299
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39273,656,691 - 73,722,983 (-)NCBI
GRCm38273,826,347 - 73,892,639 (-)NCBI
Celera275,503,531 - 75,579,505 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001284371   ⟹   NP_001271300
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39273,656,691 - 73,722,983 (-)NCBI
GRCm38273,826,347 - 73,892,639 (-)NCBI
Celera275,503,531 - 75,579,505 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001284372   ⟹   NP_001271301
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39273,646,853 - 73,722,983 (-)NCBI
GRCm38273,816,509 - 73,892,639 (-)NCBI
Celera275,503,531 - 75,579,505 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001284373   ⟹   NP_001271302
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39273,646,853 - 73,722,983 (-)NCBI
GRCm38273,816,509 - 73,892,639 (-)NCBI
Celera275,503,531 - 75,579,505 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001284374   ⟹   NP_001271303
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39273,646,853 - 73,722,983 (-)NCBI
GRCm38273,816,509 - 73,892,639 (-)NCBI
Celera275,503,531 - 75,579,505 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001284376   ⟹   NP_001271305
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39273,646,853 - 73,722,983 (-)NCBI
GRCm38273,816,509 - 73,892,639 (-)NCBI
Celera275,503,531 - 75,579,505 (-)NCBI
Sequence:
RefSeq Acc Id: NM_009715   ⟹   NP_033845
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39273,646,853 - 73,722,983 (-)NCBI
GRCm38273,816,509 - 73,892,639 (-)NCBI
MGSCv37273,654,578 - 73,730,685 (-)RGD
Celera275,503,531 - 75,579,505 (-)NCBI
cM Map2 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_030246840   ⟹   XP_030102700
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39273,646,856 - 73,723,021 (-)NCBI
GRCm38273,816,513 - 73,892,677 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030246841   ⟹   XP_030102701
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39273,646,862 - 73,722,681 (-)NCBI
GRCm38273,816,518 - 73,892,328 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030246843   ⟹   XP_030102703
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39273,646,862 - 73,722,946 (-)NCBI
GRCm38273,816,518 - 73,892,593 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030246844   ⟹   XP_030102704
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39273,646,862 - 73,722,708 (-)NCBI
GRCm38273,816,518 - 73,892,359 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030246846   ⟹   XP_030102706
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39273,646,862 - 73,722,990 (-)NCBI
GRCm38273,816,518 - 73,892,641 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030246847   ⟹   XP_030102707
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39273,646,856 - 73,723,021 (-)NCBI
GRCm38273,816,518 - 73,892,639 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030246850   ⟹   XP_030102710
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39273,646,856 - 73,723,094 (-)NCBI
GRCm38273,816,518 - 73,892,639 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030246853   ⟹   XP_030102713
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39273,646,862 - 73,722,681 (-)NCBI
GRCm38273,816,513 - 73,892,254 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030246855   ⟹   XP_030102715
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39273,646,862 - 73,722,969 (-)NCBI
GRCm38273,816,518 - 73,892,625 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030246858   ⟹   XP_030102718
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39273,646,862 - 73,722,952 (-)NCBI
GRCm38273,816,518 - 73,892,608 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030246867   ⟹   XP_030102727
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39273,646,862 - 73,722,672 (-)NCBI
GRCm38273,816,518 - 73,892,328 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030246872   ⟹   XP_030102732
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39273,646,862 - 73,722,969 (-)NCBI
GRCm38273,816,518 - 73,892,625 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030246873   ⟹   XP_030102733
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39273,646,862 - 73,722,908 (-)NCBI
GRCm38273,816,518 - 73,892,564 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036157691   ⟹   XP_036013584
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39273,646,862 - 73,722,708 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036157694   ⟹   XP_036013587
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39273,646,862 - 73,722,984 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036157700   ⟹   XP_036013593
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39273,646,862 - 73,722,672 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036157707   ⟹   XP_036013600
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39273,646,862 - 73,722,908 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036157708   ⟹   XP_036013601
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39273,646,862 - 73,722,946 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036157709   ⟹   XP_036013602
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39273,646,862 - 73,722,708 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036157711   ⟹   XP_036013604
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39273,646,862 - 73,722,908 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036157712   ⟹   XP_036013605
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39273,646,862 - 73,722,908 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036157713   ⟹   XP_036013606
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39273,660,897 - 73,722,972 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004937562
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39273,646,856 - 73,723,021 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001020264 (Get FASTA)   NCBI Sequence Viewer  
  NP_001271298 (Get FASTA)   NCBI Sequence Viewer  
  NP_001271299 (Get FASTA)   NCBI Sequence Viewer  
  NP_001271300 (Get FASTA)   NCBI Sequence Viewer  
  NP_001271301 (Get FASTA)   NCBI Sequence Viewer  
  NP_001271302 (Get FASTA)   NCBI Sequence Viewer  
  NP_001271303 (Get FASTA)   NCBI Sequence Viewer  
  NP_001271305 (Get FASTA)   NCBI Sequence Viewer  
  NP_033845 (Get FASTA)   NCBI Sequence Viewer  
  XP_030102700 (Get FASTA)   NCBI Sequence Viewer  
  XP_030102701 (Get FASTA)   NCBI Sequence Viewer  
  XP_030102703 (Get FASTA)   NCBI Sequence Viewer  
  XP_030102704 (Get FASTA)   NCBI Sequence Viewer  
  XP_030102706 (Get FASTA)   NCBI Sequence Viewer  
  XP_030102707 (Get FASTA)   NCBI Sequence Viewer  
  XP_030102710 (Get FASTA)   NCBI Sequence Viewer  
  XP_030102713 (Get FASTA)   NCBI Sequence Viewer  
  XP_030102715 (Get FASTA)   NCBI Sequence Viewer  
  XP_030102718 (Get FASTA)   NCBI Sequence Viewer  
  XP_030102727 (Get FASTA)   NCBI Sequence Viewer  
  XP_030102732 (Get FASTA)   NCBI Sequence Viewer  
  XP_030102733 (Get FASTA)   NCBI Sequence Viewer  
  XP_036013584 (Get FASTA)   NCBI Sequence Viewer  
  XP_036013587 (Get FASTA)   NCBI Sequence Viewer  
  XP_036013593 (Get FASTA)   NCBI Sequence Viewer  
  XP_036013600 (Get FASTA)   NCBI Sequence Viewer  
  XP_036013601 (Get FASTA)   NCBI Sequence Viewer  
  XP_036013602 (Get FASTA)   NCBI Sequence Viewer  
  XP_036013604 (Get FASTA)   NCBI Sequence Viewer  
  XP_036013605 (Get FASTA)   NCBI Sequence Viewer  
  XP_036013606 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAA39780 (Get FASTA)   NCBI Sequence Viewer  
  AAA40394 (Get FASTA)   NCBI Sequence Viewer  
  AAB21128 (Get FASTA)   NCBI Sequence Viewer  
  AAB21129 (Get FASTA)   NCBI Sequence Viewer  
  AAB64016 (Get FASTA)   NCBI Sequence Viewer  
  AAH42210 (Get FASTA)   NCBI Sequence Viewer  
  AAH79883 (Get FASTA)   NCBI Sequence Viewer  
  AAH82596 (Get FASTA)   NCBI Sequence Viewer  
  AAL90756 (Get FASTA)   NCBI Sequence Viewer  
  AAL90757 (Get FASTA)   NCBI Sequence Viewer  
  AAX83926 (Get FASTA)   NCBI Sequence Viewer  
  BAC29065 (Get FASTA)   NCBI Sequence Viewer  
  BAC32623 (Get FASTA)   NCBI Sequence Viewer  
  BAC34684 (Get FASTA)   NCBI Sequence Viewer  
  BAC39869 (Get FASTA)   NCBI Sequence Viewer  
  BAE24156 (Get FASTA)   NCBI Sequence Viewer  
  BAE24498 (Get FASTA)   NCBI Sequence Viewer  
  BAE26726 (Get FASTA)   NCBI Sequence Viewer  
  EDL27148 (Get FASTA)   NCBI Sequence Viewer  
  EDL27149 (Get FASTA)   NCBI Sequence Viewer  
  EDL27150 (Get FASTA)   NCBI Sequence Viewer  
  EDL27151 (Get FASTA)   NCBI Sequence Viewer  
  EDL27152 (Get FASTA)   NCBI Sequence Viewer  
  EDL27153 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000058521.6
  ENSMUSP00000088311
  ENSMUSP00000088311.5
  ENSMUSP00000097588
  ENSMUSP00000097588.5
  ENSMUSP00000107638
  ENSMUSP00000107638.2
  ENSMUSP00000107641
  ENSMUSP00000107641.3
  ENSMUSP00000107647
  ENSMUSP00000107647.3
  ENSMUSP00000107648
  ENSMUSP00000107648.2
  ENSMUSP00000118560
  ENSMUSP00000133632
GenBank Protein P16951 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_033845   ⟸   NM_009715
- Peptide Label: isoform 2
- UniProtKB: Q543G2 (UniProtKB/TrEMBL),   Q68FE3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001020264   ⟸   NM_001025093
- Peptide Label: isoform 1
- UniProtKB: Q64090 (UniProtKB/Swiss-Prot),   Q64089 (UniProtKB/Swiss-Prot),   Q64091 (UniProtKB/Swiss-Prot),   P16951 (UniProtKB/Swiss-Prot),   Q8CGB4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001271303   ⟸   NM_001284374
- Peptide Label: isoform 6
- UniProtKB: P70299 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001271298   ⟸   NM_001284369
- Peptide Label: isoform 2
- UniProtKB: Q543G2 (UniProtKB/TrEMBL),   Q68FE3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001271302   ⟸   NM_001284373
- Peptide Label: isoform 5
- UniProtKB: Q640L6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001271305   ⟸   NM_001284376
- Peptide Label: isoform 3
- UniProtKB: Q68FE3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001271301   ⟸   NM_001284372
- Peptide Label: isoform 5
- UniProtKB: Q640L6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001271300   ⟸   NM_001284371
- Peptide Label: isoform 4
- UniProtKB: Q8CBR9 (UniProtKB/TrEMBL),   G3UXC3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001271299   ⟸   NM_001284370
- Peptide Label: isoform 4
- UniProtKB: Q8CBR9 (UniProtKB/TrEMBL),   G3UXC3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030102700   ⟸   XM_030246840
- Peptide Label: isoform X1
- UniProtKB: Q64090 (UniProtKB/Swiss-Prot),   Q64089 (UniProtKB/Swiss-Prot),   P16951 (UniProtKB/Swiss-Prot),   Q64091 (UniProtKB/Swiss-Prot),   Q8CGB4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030102713   ⟸   XM_030246853
- Peptide Label: isoform X4
- UniProtKB: Q640L6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030102706   ⟸   XM_030246846
- Peptide Label: isoform X2
- UniProtKB: Q543G2 (UniProtKB/TrEMBL),   Q68FE3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030102707   ⟸   XM_030246847
- Peptide Label: isoform X3
- UniProtKB: G3UXC3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030102710   ⟸   XM_030246850
- Peptide Label: isoform X3
- UniProtKB: G3UXC3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030102732   ⟸   XM_030246872
- Peptide Label: isoform X6
RefSeq Acc Id: XP_030102715   ⟸   XM_030246855
- Peptide Label: isoform X4
- UniProtKB: Q640L6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030102718   ⟸   XM_030246858
- Peptide Label: isoform X4
- UniProtKB: Q640L6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030102703   ⟸   XM_030246843
- Peptide Label: isoform X1
- UniProtKB: Q64090 (UniProtKB/Swiss-Prot),   Q64089 (UniProtKB/Swiss-Prot),   P16951 (UniProtKB/Swiss-Prot),   Q64091 (UniProtKB/Swiss-Prot),   Q8CGB4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030102733   ⟸   XM_030246873
- Peptide Label: isoform X7
RefSeq Acc Id: XP_030102704   ⟸   XM_030246844
- Peptide Label: isoform X1
- UniProtKB: Q64090 (UniProtKB/Swiss-Prot),   Q64089 (UniProtKB/Swiss-Prot),   P16951 (UniProtKB/Swiss-Prot),   Q64091 (UniProtKB/Swiss-Prot),   Q8CGB4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030102701   ⟸   XM_030246841
- Peptide Label: isoform X1
- UniProtKB: Q64090 (UniProtKB/Swiss-Prot),   Q64089 (UniProtKB/Swiss-Prot),   P16951 (UniProtKB/Swiss-Prot),   Q64091 (UniProtKB/Swiss-Prot),   Q8CGB4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030102727   ⟸   XM_030246867
- Peptide Label: isoform X4
- UniProtKB: Q640L6 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSMUSP00000114828   ⟸   ENSMUST00000124737
Ensembl Acc Id: ENSMUSP00000088311   ⟸   ENSMUST00000090802
Ensembl Acc Id: ENSMUSP00000107638   ⟸   ENSMUST00000112007
Ensembl Acc Id: ENSMUSP00000107641   ⟸   ENSMUST00000112010
Ensembl Acc Id: ENSMUSP00000107648   ⟸   ENSMUST00000112017
Ensembl Acc Id: ENSMUSP00000107647   ⟸   ENSMUST00000112016
Ensembl Acc Id: ENSMUSP00000118719   ⟸   ENSMUST00000154456
Ensembl Acc Id: ENSMUSP00000097588   ⟸   ENSMUST00000100009
Ensembl Acc Id: ENSMUSP00000058521   ⟸   ENSMUST00000055833
Ensembl Acc Id: ENSMUSP00000133632   ⟸   ENSMUST00000173010
Ensembl Acc Id: ENSMUSP00000118560   ⟸   ENSMUST00000128531
Ensembl Acc Id: ENSMUSP00000118357   ⟸   ENSMUST00000136958
RefSeq Acc Id: XP_036013587   ⟸   XM_036157694
- Peptide Label: isoform X1
- UniProtKB: Q64090 (UniProtKB/Swiss-Prot),   Q64089 (UniProtKB/Swiss-Prot),   P16951 (UniProtKB/Swiss-Prot),   Q64091 (UniProtKB/Swiss-Prot),   Q8CGB4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036013601   ⟸   XM_036157708
- Peptide Label: isoform X2
- UniProtKB: Q543G2 (UniProtKB/TrEMBL),   Q68FE3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036013604   ⟸   XM_036157711
- Peptide Label: isoform X5
RefSeq Acc Id: XP_036013600   ⟸   XM_036157707
- Peptide Label: isoform X2
- UniProtKB: Q543G2 (UniProtKB/TrEMBL),   Q68FE3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036013605   ⟸   XM_036157712
- Peptide Label: isoform X6
RefSeq Acc Id: XP_036013602   ⟸   XM_036157709
- Peptide Label: isoform X4
- UniProtKB: Q640L6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036013584   ⟸   XM_036157691
- Peptide Label: isoform X1
- UniProtKB: Q64090 (UniProtKB/Swiss-Prot),   Q64089 (UniProtKB/Swiss-Prot),   P16951 (UniProtKB/Swiss-Prot),   Q64091 (UniProtKB/Swiss-Prot),   Q8CGB4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036013593   ⟸   XM_036157700
- Peptide Label: isoform X1
- UniProtKB: Q64090 (UniProtKB/Swiss-Prot),   Q64089 (UniProtKB/Swiss-Prot),   P16951 (UniProtKB/Swiss-Prot),   Q64091 (UniProtKB/Swiss-Prot),   Q8CGB4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036013606   ⟸   XM_036157713
- Peptide Label: isoform X8
- UniProtKB: A2AQF0 (UniProtKB/TrEMBL)
Protein Domains
bZIP   C2H2-type

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P16951-F1-model_v2 AlphaFold P16951 1-487 view protein structure

Promoters
RGD ID:6830777
Promoter ID:MM_KWN:29730
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000055833,   ENSMUST00000090802,   ENSMUST00000100005,   ENSMUST00000100007,   ENSMUST00000100009,   ENSMUST00000112002,   ENSMUST00000112005,   ENSMUST00000112007,   ENSMUST00000112017,   NM_001025093,   OTTMUST00000031831,   OTTMUST00000031833,   OTTMUST00000031837,   OTTMUST00000031909,   OTTMUST00000031910,   OTTMUST00000031977,   OTTMUST00000031978,   OTTMUST00000031979,   OTTMUST00000031982,   UC008KDG.1,   UC008KDH.1,   UC008KDJ.1,   UC008KDK.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36273,730,476 - 73,731,147 (+)MPROMDB
RGD ID:6877638
Promoter ID:EPDNEW_M2269
Type:initiation region
Name:Atf2_1
Description:Mus musculus activating transcription factor 2 , transcript variant6, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38273,892,628 - 73,892,688EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:109349 AgrOrtholog
Ensembl Genes ENSMUSG00000027104 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000055833.12 UniProtKB/Swiss-Prot
  ENSMUST00000090802 ENTREZGENE
  ENSMUST00000090802.11 UniProtKB/Swiss-Prot
  ENSMUST00000100009 ENTREZGENE
  ENSMUST00000100009.11 UniProtKB/Swiss-Prot
  ENSMUST00000112007 ENTREZGENE
  ENSMUST00000112007.8 UniProtKB/Swiss-Prot
  ENSMUST00000112010 ENTREZGENE
  ENSMUST00000112010.9 UniProtKB/Swiss-Prot
  ENSMUST00000112016 ENTREZGENE
  ENSMUST00000112016.9 UniProtKB/Swiss-Prot
  ENSMUST00000112017 ENTREZGENE
  ENSMUST00000112017.8 UniProtKB/Swiss-Prot
  ENSMUST00000128531 ENTREZGENE
  ENSMUST00000143714 ENTREZGENE
  ENSMUST00000156455 ENTREZGENE
  ENSMUST00000173010 ENTREZGENE
Gene3D-CATH 1.20.5.170 UniProtKB/Swiss-Prot
  Classic Zinc Finger UniProtKB/Swiss-Prot
InterPro bZIP UniProtKB/Swiss-Prot
  bZIP_sf UniProtKB/Swiss-Prot
  bZIP_transcription_factors UniProtKB/Swiss-Prot
  TF_CRE-BP1-typ UniProtKB/Swiss-Prot
  Znf_C2H2_sf UniProtKB/Swiss-Prot
  Znf_C2H2_type UniProtKB/Swiss-Prot
KEGG Report mmu:11909 UniProtKB/Swiss-Prot
MGD MGI:109349 ENTREZGENE
NCBI Gene 11909 ENTREZGENE
PANTHER CYCLIC-AMP RESPONSE ELEMENT BINDING PROTEIN UniProtKB/Swiss-Prot
Pfam bZIP_1 UniProtKB/Swiss-Prot
PhenoGen Atf2 PhenoGen
PIRSF ATF2_CRE-BP1 UniProtKB/Swiss-Prot
PROSITE BZIP UniProtKB/Swiss-Prot
  BZIP_BASIC UniProtKB/Swiss-Prot
  ZINC_FINGER_C2H2_1 UniProtKB/Swiss-Prot
  ZINC_FINGER_C2H2_2 UniProtKB/Swiss-Prot
SMART BRLZ UniProtKB/Swiss-Prot
Superfamily-SCOP SSF57667 UniProtKB/Swiss-Prot
  SSF57959 UniProtKB/Swiss-Prot
UniProt A2AQE9_MOUSE UniProtKB/TrEMBL
  A2AQF0 ENTREZGENE, UniProtKB/TrEMBL
  A2AQF1_MOUSE UniProtKB/TrEMBL
  ATF2_MOUSE UniProtKB/Swiss-Prot
  F6Z2B2_MOUSE UniProtKB/TrEMBL
  G3UXC3 ENTREZGENE, UniProtKB/TrEMBL
  P16951 ENTREZGENE
  P70299 ENTREZGENE, UniProtKB/TrEMBL
  Q3UKS5_MOUSE UniProtKB/TrEMBL
  Q3US39_MOUSE UniProtKB/TrEMBL
  Q3UT24_MOUSE UniProtKB/TrEMBL
  Q543G2 ENTREZGENE, UniProtKB/TrEMBL
  Q64089 ENTREZGENE
  Q64090 ENTREZGENE
  Q64091 ENTREZGENE
  Q640L6 ENTREZGENE, UniProtKB/TrEMBL
  Q68FE3 ENTREZGENE, UniProtKB/TrEMBL
  Q8BQY2_MOUSE UniProtKB/TrEMBL
  Q8CBR9 ENTREZGENE, UniProtKB/TrEMBL
  Q8CGB4 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary Q64089 UniProtKB/Swiss-Prot
  Q64090 UniProtKB/Swiss-Prot
  Q64091 UniProtKB/Swiss-Prot