Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | polycystic ovary syndrome | | ISO | HOOK3 (Homo sapiens) | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:21411543 | |
|
Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | polycystic ovary syndrome | | ISO | HOOK3 (Homo sapiens) | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:21411543 | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
# | Reference Title | Reference Citation |
1. | Mouse brain organization revealed through direct genome-scale TF expression analysis. | Gray PA, etal., Science 2004 Dec 24;306(5705):2255-7. |
2. | MGDs mouse GO annotations | MGD data from the GO Consortium |
3. | Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. | Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73. |
4. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
PMID:8889548 | PMID:10349636 | PMID:11042159 | PMID:11076861 | PMID:11217851 | PMID:12477932 | PMID:12904583 | PMID:12950921 | PMID:14610273 | PMID:15075236 | PMID:15782199 | PMID:16141072 |
PMID:16141073 | PMID:16512683 | PMID:17237231 | PMID:17967808 | PMID:18287559 | PMID:18799693 | PMID:20152126 | PMID:21267068 | PMID:21873635 | PMID:22988430 | PMID:27365401 | PMID:28671696 |
PMID:33378226 | PMID:35449600 |
Hook3 (Mus musculus - house mouse) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
HOOK3 (Homo sapiens - human) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Hook3 (Rattus norvegicus - Norway rat) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Hook3 (Chinchilla lanigera - long-tailed chinchilla) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
HOOK3 (Pan paniscus - bonobo/pygmy chimpanzee) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
HOOK3 (Canis lupus familiaris - dog) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Hook3 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
HOOK3 (Sus scrofa - pig) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
HOOK3 (Chlorocebus sabaeus - green monkey) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Hook3 (Heterocephalus glaber - naked mole-rat) |
|
.
Variants in Hook3
3229 total Variants |
The detailed report is available here: | Full Report | CSV | TAB | Printer | ||||
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
The following QTLs overlap with this region. | Full Report | CSV | TAB | Printer | Gviewer |
AW743351 |
|
|||||||||||||||||||||||||||||||||||
RH136156 |
|
|||||||||||||||||||||||||||||||||||
Hook3 |
|
RefSeq Transcripts | NM_207659 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
XM_006509148 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006509149 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006509150 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XR_004934842 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | AC093366 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
AK042180 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK054263 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK077784 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK080377 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK082491 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK084594 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK087737 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK137723 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK145149 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK162815 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK170858 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK195082 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AY223806 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BC090960 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CH466580 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
RefSeq Acc Id: | ENSMUST00000037182 ⟹ ENSMUSP00000046788 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
|
RefSeq Acc Id: | ENSMUST00000147613 ⟹ ENSMUSP00000115008 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
|
RefSeq Acc Id: | ENSMUST00000152144 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
|
RefSeq Acc Id: | ENSMUST00000209542 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
|
RefSeq Acc Id: | ENSMUST00000209996 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
|
RefSeq Acc Id: | ENSMUST00000210172 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
|
RefSeq Acc Id: | ENSMUST00000210860 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
|
RefSeq Acc Id: | ENSMUST00000211292 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
|
RefSeq Acc Id: | ENSMUST00000211683 ⟹ ENSMUSP00000147595 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
|
RefSeq Acc Id: | ENSMUST00000211777 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
|
RefSeq Acc Id: | NM_207659 ⟹ NP_997542 | ||||||||||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||
Position: |
|
||||||||||||||||||||||||
Sequence: |
RefSeq Acc Id: | XM_006509148 ⟹ XP_006509211 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
|
||||||||||||
Sequence: |
RefSeq Acc Id: | XM_006509149 ⟹ XP_006509212 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
|
||||||||||||
Sequence: |
RefSeq Acc Id: | XM_006509150 ⟹ XP_006509213 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
|
||||||||||||
Sequence: |
RefSeq Acc Id: | XR_004934842 | ||||||||
Type: | NON-CODING | ||||||||
Position: |
|
||||||||
Sequence: |
Protein RefSeqs | NP_997542 | (Get FASTA) | NCBI Sequence Viewer |
XP_006509211 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006509212 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006509213 | (Get FASTA) | NCBI Sequence Viewer | |
GenBank Protein | AAH90960 | (Get FASTA) | NCBI Sequence Viewer |
AAO43109 | (Get FASTA) | NCBI Sequence Viewer | |
BAC31191 | (Get FASTA) | NCBI Sequence Viewer | |
BAC35709 | (Get FASTA) | NCBI Sequence Viewer | |
BAC37897 | (Get FASTA) | NCBI Sequence Viewer | |
BAC39222 | (Get FASTA) | NCBI Sequence Viewer | |
BAE23477 | (Get FASTA) | NCBI Sequence Viewer | |
BAE26261 | (Get FASTA) | NCBI Sequence Viewer | |
EDL32811 | (Get FASTA) | NCBI Sequence Viewer | |
Ensembl Protein | ENSMUSP00000046788 | ||
ENSMUSP00000046788.8 | |||
ENSMUSP00000115008.3 | |||
ENSMUSP00000147595.2 | |||
GenBank Protein | Q8BUK6 | (Get FASTA) | NCBI Sequence Viewer |
RefSeq Acc Id: | NP_997542 ⟸ NM_207659 |
- UniProtKB: | Q8BW57 (UniProtKB/Swiss-Prot), Q8BV48 (UniProtKB/Swiss-Prot), Q540A0 (UniProtKB/Swiss-Prot), Q8BY41 (UniProtKB/Swiss-Prot), Q8BUK6 (UniProtKB/Swiss-Prot), Q5BKS5 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_006509213 ⟸ XM_006509150 |
- Peptide Label: | isoform X3 |
- UniProtKB: | Q5BKS5 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_006509211 ⟸ XM_006509148 |
- Peptide Label: | isoform X1 |
- UniProtKB: | Q5BKS5 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_006509212 ⟸ XM_006509149 |
- Peptide Label: | isoform X2 |
- UniProtKB: | Q5BKS5 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | ENSMUSP00000147595 ⟸ ENSMUST00000211683 |
RefSeq Acc Id: | ENSMUSP00000115008 ⟸ ENSMUST00000147613 |
RefSeq Acc Id: | ENSMUSP00000046788 ⟸ ENSMUST00000037182 |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-Q8BUK6-F1-model_v2 | AlphaFold | Q8BUK6 | 1-718 | view protein structure |
RGD ID: | 8666797 | ||||||||
Promoter ID: | EPDNEW_M11428 | ||||||||
Type: | initiation region | ||||||||
Name: | Hook3_1 | ||||||||
Description: | Mus musculus hook microtubule tethering protein 3 , mRNA. | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
|
RGD ID: | 6843685 | ||||||||
Promoter ID: | MM_KWN:54042 | ||||||||
Type: | CpG-Island | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | MPROMDB | ||||||||
Tissues & Cell Lines: | 3T3L1_Day0, 3T3L1_Day1, 3T3L1_Day2, 3T3L1_Day3, 3T3L1_Day4, 3T3L1_Day6, BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, ES_Cell, Kidney, Liver, Lung, MEF_B4, MEF_B6, Spleen | ||||||||
Transcripts: | ENSMUST00000110577, ENSMUST00000110579, ENSMUST00000110580, NM_207659, OTTMUST00000058582, OTTMUST00000058589, OTTMUST00000058590, UC009LHL.1, UC009LHN.1, UC009LHO.1, UC009LHP.1 | ||||||||
Position: |
|
Database | Acc Id | Source(s) |
AGR Gene | MGI:2443554 | AgrOrtholog |
Ensembl Genes | ENSMUSG00000037234 | Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Ensembl Transcript | ENSMUST00000037182 | ENTREZGENE |
ENSMUST00000037182.14 | UniProtKB/Swiss-Prot | |
ENSMUST00000147613.3 | UniProtKB/TrEMBL | |
ENSMUST00000211683.2 | UniProtKB/TrEMBL | |
Gene3D-CATH | 1.10.418.10 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
InterPro | CH-domain | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
CH_dom_sf | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Hook-like_fam | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
HOOK_N | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
KEGG Report | mmu:320191 | UniProtKB/Swiss-Prot |
MGD | MGI:2443554 | ENTREZGENE |
NCBI Gene | 320191 | ENTREZGENE |
PANTHER | HOOK PROTEINS | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
PROTEIN HOOK HOMOLOG 3 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Pfam | HOOK | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
HOOK_N | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
PhenoGen | Hook3 | PhenoGen |
PROSITE | PS50021 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Superfamily-SCOP | Hook domain | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
UniProt | A0A1B0GRN5_MOUSE | UniProtKB/TrEMBL |
F6W1A2_MOUSE | UniProtKB/TrEMBL | |
HOOK3_MOUSE | UniProtKB/Swiss-Prot | |
Q3UUZ6_MOUSE | UniProtKB/TrEMBL | |
Q540A0 | ENTREZGENE | |
Q5BKS5 | ENTREZGENE, UniProtKB/TrEMBL | |
Q8BUK6 | ENTREZGENE | |
Q8BV48 | ENTREZGENE | |
Q8BW57 | ENTREZGENE | |
Q8BY41 | ENTREZGENE | |
UniProt Secondary | Q540A0 | UniProtKB/Swiss-Prot |
Q8BV48 | UniProtKB/Swiss-Prot | |
Q8BW57 | UniProtKB/Swiss-Prot | |
Q8BY41 | UniProtKB/Swiss-Prot |
Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
---|---|---|---|---|---|---|---|
2016-04-05 | Hook3 | hook microtubule tethering protein 3 | AI317159 | expressed sequence AI317159 | Data merged from RGD:1610561 | 737654 | PROVISIONAL |
2016-04-05 | Hook3 | hook microtubule tethering protein 3 | 5830454D03Rik | RIKEN cDNA 5830454D03 gene | Data merged from RGD:1607783 | 737654 | PROVISIONAL |
2015-12-29 | Hook3 | hook microtubule tethering protein 3 | hook homolog 3 (Drosophila) | Symbol and/or name change | 5135510 | APPROVED |