Wnt7a (wingless-type MMTV integration site family, member 7A) - Rat Genome Database

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Gene: Wnt7a (wingless-type MMTV integration site family, member 7A) Mus musculus
Analyze
Symbol: Wnt7a
Name: wingless-type MMTV integration site family, member 7A
RGD ID: 69160
MGI Page MGI
Description: Exhibits frizzled binding activity. Involved in several processes, including animal organ development; blood vessel morphogenesis; and embryonic limb morphogenesis. Localizes to several cellular components, including Schaffer collateral - CA1 synapse; cell surface; and glutamatergic synapse. Is expressed in several structures, including brain; embryo ectoderm; reproductive system; sensory organ; and urinary system. Used to study Fuhrmann syndrome. Human ortholog(s) of this gene implicated in Fuhrmann syndrome and Schinzel type phocomelia. Orthologous to human WNT7A (Wnt family member 7A); PARTICIPATES IN Wnt signaling, canonical pathway; Wnt signaling, non-canonical pathway; basal cell carcinoma pathway; INTERACTS WITH 4,4'-sulfonyldiphenol; 5-aza-2'-deoxycytidine; all-trans-retinoic acid.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: AI849442; postaxial hemimelia; px; tw; wingless-related MMTV integration site 7A; Wnt-; Wnt-7a
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39691,340,963 - 91,388,335 (-)NCBIGRCm39mm39
GRCm39 Ensembl691,340,963 - 91,388,345 (-)Ensembl
GRCm38691,363,981 - 91,411,353 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl691,363,981 - 91,411,363 (-)EnsemblGRCm38mm10GRCm38
MGSCv37691,313,977 - 91,361,363 (-)NCBIGRCm37mm9NCBIm37
MGSCv36691,329,487 - 91,376,873 (-)NCBImm8
Celera693,257,779 - 93,305,821 (-)NCBICelera
Cytogenetic Map6D1NCBI
cM Map640.45NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
angiogenesis  (IGI)
animal organ morphogenesis  (TAS)
asymmetric protein localization involved in cell fate determination  (IDA)
canonical Wnt signaling pathway  (IBA,IDA,IGI,ISO)
cartilage condensation  (ISO)
cartilage development  (IDA)
cell fate commitment  (IBA)
cell proliferation in forebrain  (ISO)
cell-cell signaling  (TAS)
cellular response to transforming growth factor beta stimulus  (ISO)
central nervous system vasculogenesis  (IGI)
cerebellar granule cell differentiation  (IDA)
chondrocyte differentiation  (ISO)
dendritic spine morphogenesis  (IGI,ISO)
dorsal/ventral pattern formation  (IMP)
embryonic axis specification  (ISO)
embryonic digit morphogenesis  (ISO)
embryonic forelimb morphogenesis  (IGI,IMP,ISO)
embryonic hindlimb morphogenesis  (IGI,ISO)
embryonic limb morphogenesis  (IGI)
establishment of cell polarity  (IDA)
forelimb morphogenesis  (IMP)
hindlimb morphogenesis  (IMP)
limb development  (IDA)
multicellular organism development  (IEA)
negative regulation of apoptotic process  (IMP)
negative regulation of neurogenesis  (ISO)
neuron differentiation  (IBA)
neurotransmitter secretion  (IGI)
non-canonical Wnt signaling pathway  (IGI)
oviduct development  (IMP)
positive regulation of cell population proliferation  (ISO)
positive regulation of cellular protein metabolic process  (ISO)
positive regulation of endothelial cell migration  (IDA)
positive regulation of epithelial cell proliferation involved in wound healing  (ISO)
positive regulation of excitatory postsynaptic potential  (IGI,ISO)
positive regulation of excitatory synapse assembly  (ISO)
positive regulation of gene expression  (IDA)
positive regulation of JNK cascade  (IBA,ISO)
positive regulation of synapse assembly  (IDA,ISO)
positive regulation of transcription by RNA polymerase II  (ISO)
positive regulation of transcription, DNA-templated  (IDA,ISO)
regulation of axon diameter  (IDA)
regulation of axonogenesis  (IDA)
regulation of cell population proliferation  (IMP)
regulation of postsynapse organization  (IDA,IMP)
regulation of presynapse assembly  (ISO)
regulation of synaptic vesicle exocytosis  (EXP,IDA,IMP,IPI)
reproductive structure development  (IMP)
response to estradiol  (ISO)
response to estrogen  (IMP)
secondary palate development  (ISO)
signal transduction  (IBA,TAS)
skeletal muscle satellite cell activation  (IDA)
skeletal muscle satellite cell maintenance involved in skeletal muscle regeneration  (IDA)
skeletal system morphogenesis  (IMP)
skin morphogenesis  (IMP)
somatic stem cell division  (IDA)
somatic stem cell population maintenance  (IMP)
stem cell development  (ISO)
synapse organization  (IGI,IMP)
uterus development  (IMP)
uterus morphogenesis  (IMP)
Wnt signaling pathway  (IGI)
Wnt signaling pathway, planar cell polarity pathway  (ISO)
wound healing  (ISO)
wound healing, spreading of epidermal cells  (ISO)

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

Additional References at PubMed
PMID:489953   PMID:1373817   PMID:1846319   PMID:2279700   PMID:4557539   PMID:7885472   PMID:7896292   PMID:8058323   PMID:8167409   PMID:8275860   PMID:8661054   PMID:8684466  
PMID:8889548   PMID:8893824   PMID:9161407   PMID:9362463   PMID:9405095   PMID:9435283   PMID:9463360   PMID:9584130   PMID:9651475   PMID:9671592   PMID:9671940   PMID:9733575  
PMID:9753670   PMID:9769174   PMID:9778510   PMID:9790192   PMID:9806537   PMID:9889131   PMID:9891778   PMID:9916808   PMID:9989404   PMID:10227294   PMID:10349636   PMID:10441734  
PMID:10585256   PMID:10595508   PMID:10607827   PMID:10706144   PMID:10721990   PMID:10967130   PMID:11029008   PMID:11042159   PMID:11076861   PMID:11290325   PMID:11336496   PMID:11429295  
PMID:11476582   PMID:11520664   PMID:11714671   PMID:11756505   PMID:11914369   PMID:12117807   PMID:12466851   PMID:12477932   PMID:12588849   PMID:12648495   PMID:12668638   PMID:12702652  
PMID:12812787   PMID:12815618   PMID:12843296   PMID:12923052   PMID:12937339   PMID:14507786   PMID:14628051   PMID:14681479   PMID:14695376   PMID:14758554   PMID:15030763   PMID:15044261  
PMID:15053977   PMID:15070830   PMID:15073149   PMID:15081361   PMID:15082716   PMID:15142975   PMID:15226823   PMID:15242796   PMID:15342465   PMID:15568017   PMID:15581864   PMID:15880404  
PMID:15880584   PMID:16054034   PMID:16141072   PMID:16141073   PMID:16154760   PMID:16207730   PMID:16207751   PMID:16495310   PMID:16602821   PMID:16630606   PMID:16675530   PMID:16678101  
PMID:16700072   PMID:16783635   PMID:16818724   PMID:16826533   PMID:16858399   PMID:17064353   PMID:17119023   PMID:17158062   PMID:17174942   PMID:17507554   PMID:17507982   PMID:17804636  
PMID:17928865   PMID:17932314   PMID:17943183   PMID:17953485   PMID:18067586   PMID:18280296   PMID:18287559   PMID:18351662   PMID:18351675   PMID:18364260   PMID:18395837   PMID:18635608  
PMID:18800919   PMID:18927151   PMID:18986540   PMID:18991257   PMID:19023080   PMID:19129494   PMID:19164599   PMID:19185060   PMID:19210786   PMID:19282366   PMID:19285468   PMID:19298015  
PMID:19363157   PMID:19369396   PMID:19497282   PMID:19515997   PMID:19562671   PMID:19690384   PMID:19806668   PMID:19890917   PMID:19906864   PMID:19913006   PMID:20151419   PMID:20161711  
PMID:20359476   PMID:20436479   PMID:20510229   PMID:20606007   PMID:20805501   PMID:20868729   PMID:20940229   PMID:21041481   PMID:21267068   PMID:21307092   PMID:21421844   PMID:21490063  
PMID:21508348   PMID:21509901   PMID:21670302   PMID:21731673   PMID:21873635   PMID:21896628   PMID:21905163   PMID:21936019   PMID:22110055   PMID:22155565   PMID:22179044   PMID:22377357  
PMID:22627288   PMID:22677559   PMID:22723712   PMID:22956684   PMID:22987443   PMID:22987640   PMID:23185011   PMID:23190887   PMID:23213437   PMID:23290138   PMID:23349620   PMID:23629626  
PMID:23702581   PMID:23827310   PMID:23884445   PMID:24287629   PMID:24394376   PMID:24586192   PMID:24711502   PMID:24727668   PMID:24776795   PMID:24803261   PMID:25053429   PMID:25166858  
PMID:25249463   PMID:25558062   PMID:25687138   PMID:25917818   PMID:26235626   PMID:26248544   PMID:26342861   PMID:26400647   PMID:26512061   PMID:26721931   PMID:26798014   PMID:26939553  
PMID:27141870   PMID:27414999   PMID:27445154   PMID:27633988   PMID:27671872   PMID:27965056   PMID:28049832   PMID:28069946   PMID:28414719   PMID:28803732   PMID:28813421   PMID:28827394  
PMID:28834739   PMID:28872671   PMID:29086765   PMID:29681511   PMID:29864439   PMID:30113308   PMID:30228991   PMID:30352686   PMID:30367944   PMID:30478038   PMID:30926747   PMID:30940800  
PMID:31225798   PMID:31257105   PMID:31291246   PMID:31647919   PMID:31772170   PMID:31776260   PMID:32325033   PMID:32369449   PMID:32571845   PMID:32907846   PMID:33086038   PMID:33141892  
PMID:33153107  


Genomics

Comparative Map Data
Wnt7a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39691,340,963 - 91,388,335 (-)NCBIGRCm39mm39
GRCm39 Ensembl691,340,963 - 91,388,345 (-)Ensembl
GRCm38691,363,981 - 91,411,353 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl691,363,981 - 91,411,363 (-)EnsemblGRCm38mm10GRCm38
MGSCv37691,313,977 - 91,361,363 (-)NCBIGRCm37mm9NCBIm37
MGSCv36691,329,487 - 91,376,873 (-)NCBImm8
Celera693,257,779 - 93,305,821 (-)NCBICelera
Cytogenetic Map6D1NCBI
cM Map640.45NCBI
WNT7A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl313,816,258 - 13,880,071 (-)EnsemblGRCh38hg38GRCh38
GRCh38313,816,258 - 13,880,071 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37313,857,755 - 13,921,568 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36313,835,083 - 13,896,619 (-)NCBINCBI36hg18NCBI36
Build 34313,835,082 - 13,896,619NCBI
Celera313,798,391 - 13,859,925 (-)NCBI
Cytogenetic Map3p25.1NCBI
HuRef313,793,735 - 13,855,835 (-)NCBIHuRef
CHM1_1313,810,090 - 13,871,973 (-)NCBICHM1_1
Wnt7a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.24123,863,108 - 123,908,981 (-)NCBI
Rnor_6.0 Ensembl4122,994,425 - 123,040,609 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.04122,994,425 - 123,040,609 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04187,505,391 - 187,551,604 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44125,541,281 - 125,586,167 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.14125,786,638 - 125,787,010 (-)NCBI
Celera4112,782,267 - 112,828,322 (-)NCBICelera
Cytogenetic Map4q34NCBI
Wnt7a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542912,647,993 - 12,694,895 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542912,647,993 - 12,693,998 (+)NCBIChiLan1.0ChiLan1.0
WNT7A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1314,075,359 - 14,138,386 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl314,077,839 - 14,138,386 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0313,733,487 - 13,797,189 (-)NCBIMhudiblu_PPA_v0panPan3
WNT7A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1204,072,010 - 4,139,521 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl204,073,929 - 4,139,436 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha204,112,838 - 4,179,523 (-)NCBI
ROS_Cfam_1.0204,096,079 - 4,162,950 (-)NCBI
UMICH_Zoey_3.1203,815,330 - 3,882,330 (-)NCBI
UNSW_CanFamBas_1.0204,137,783 - 4,204,657 (-)NCBI
UU_Cfam_GSD_1.0204,102,223 - 4,168,959 (-)NCBI
Wnt7a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494219,620,674 - 19,645,097 (-)NCBI
SpeTri2.0NW_00493689845,903 - 70,313 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
WNT7A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1370,538,894 - 70,602,455 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11370,538,802 - 70,602,464 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21377,997,741 - 78,061,325 (+)NCBISscrofa10.2Sscrofa10.2susScr3
WNT7A
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12249,805,415 - 49,863,115 (-)NCBI
ChlSab1.1 Ensembl2249,805,463 - 49,862,830 (-)Ensembl
Wnt7a
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462479612,431,310 - 12,472,303 (+)NCBI

Position Markers
Wnt7a  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38691,364,833 - 91,365,427UniSTSGRCm38
MGSCv37691,314,827 - 91,315,421UniSTSGRCm37
Celera693,258,629 - 93,259,223UniSTS
Cytogenetic Map6D1UniSTS
cM Map639.5UniSTS
cM Map639.5UniSTS
cM Map639.5UniSTS
BB445750  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38691,365,341 - 91,365,467UniSTSGRCm38
MGSCv37691,315,335 - 91,315,461UniSTSGRCm37
Celera693,259,137 - 93,259,263UniSTS
Cytogenetic Map6D1UniSTS
cM Map639.5UniSTS
Whitehead/MRC_RH6927.86UniSTS
BE106651  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38691,365,551 - 91,365,710UniSTSGRCm38
MGSCv37691,315,545 - 91,315,704UniSTSGRCm37
Celera693,259,347 - 93,259,506UniSTS
Cytogenetic Map6D1UniSTS
cM Map639.5UniSTS
AI849442  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38691,364,154 - 91,364,237UniSTSGRCm38
MGSCv37691,314,148 - 91,314,231UniSTSGRCm37
Celera693,257,950 - 93,258,033UniSTS
Cytogenetic Map6D1UniSTS
cM Map639.5UniSTS
Whitehead/MRC_RH6933.21UniSTS
Wnt7a  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map6D1UniSTS
Wnt7a  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38691,364,280 - 91,364,736UniSTSGRCm38
MGSCv37691,314,274 - 91,314,730UniSTSGRCm37
Celera693,258,076 - 93,258,532UniSTS
Cytogenetic Map6D1UniSTS
Wnt7a  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38691,364,486 - 91,364,669UniSTSGRCm38
MGSCv37691,314,480 - 91,314,663UniSTSGRCm37
Celera693,258,282 - 93,258,465UniSTS
Cytogenetic Map6D1UniSTS
Wnt7a  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map6D1UniSTS
Wnt7a  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map6D1UniSTS
Wnt7a  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map6D1UniSTS
Wnt7a  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38691,366,005 - 91,366,211UniSTSGRCm38
MGSCv37691,315,999 - 91,316,205UniSTSGRCm37
Celera693,259,801 - 93,260,007UniSTS
Cytogenetic Map6D1UniSTS
cM Map639.5UniSTS
Wnt7a  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map6D1UniSTS
cM Map639.5UniSTS
Wnt7a  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38691,364,114 - 91,364,266UniSTSGRCm38
MGSCv37691,314,108 - 91,314,260UniSTSGRCm37
Celera693,257,910 - 93,258,062UniSTS
Cytogenetic Map6D1UniSTS
Wnt7a  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map6D1UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
25440480Moaq2_mmodifier of alien QTL 2 (mouse)61117500000Mouse
26884414Bzwq12_mbi-zygomatic width QTL 12, 16 week (mouse)63400000139100000Mouse
4142126W3q3_mweight 3 weeks QTL 3 (mouse)Not determined450382396656149Mouse
4142361W10q11_mweight 10 weeks QTL 11 (mouse)Not determined450382396656149Mouse
4142271Egq8_mearly growth QTL 8 (mouse)Not determined450382396656149Mouse
4142232W6q4_mweight 6 weeks QTL 4 (mouse)Not determined450382396656149Mouse
1558984Cplaq9_mcircadian period of locomotor activity 9 (mouse)Not determined63866962592607450Mouse
10412157Fl1n_mfatty liver 1 in NSY (mouse)Not determined645314059128835032Mouse
4142259Tabw2_mtally ho associated body weight 2 (mouse)Not determined46935985136423692Mouse
25314319Histh6_mhistamine hypersensitivity 6 (mouse)648720000125360000Mouse
25314320Histh5_mhistamine hypersensitivity 5 (mouse)648720000148450000Mouse
1301962Eila2_methanol induced locomotor activity 2 (mouse)Not determined648726556125356785Mouse
1357683Igf1sl1_mIGF-1 serum levels 1 (mouse)Not determined652161713116155267Mouse
1558977Skmw10_mskeletal muscle weight 10 (mouse)Not determined65844758392447710Mouse
10043972Obq28_mobesity QTL 28 (mouse)Not determined65854043392540433Mouse
1301740Bwq2_mbody weight QTL 2 (mouse)Not determined66005768094057799Mouse
1301369Im4_mimmunoregulatory 4 (mouse)Not determined66348473897484905Mouse
1300650Bw18_mbody weight QTL 18 (mouse)Not determined666713869100714031Mouse
1301876Bits2_mbitterness sensitivity 2 (mouse)Not determined670425898104426034Mouse
1301813Skl3_mskeletal size (tail length) 3 (mouse)Not determined670425898104426034Mouse
1301034Egrm2_mearly growth rate (mouse)Not determined670425898104426034Mouse
1302020Bbaa20_mB.burgdorferi-associated arthritis 20 (mouse)Not determined67132262193464093Mouse
1300869Stheal5_msoft tissue heal 5 (mouse)Not determined671575060105575178Mouse
1300954Fcsa1_mfemoral cross-sectional area 1 (mouse)Not determined671981024105981170Mouse
1301521Pas1c_mpulmonary adenoma susceptibility 1c (mouse)Not determined671981024105981170Mouse
13506930Recrq9_mrecombination rate in male meiosis QTL 9 (mouse)673500000134700000Mouse
1301320Ots1_movarian teratoma susceptibility 1 (mouse)Not determined675447583104503555Mouse
1301571Arrd1_mage-related retinal degeneration 1 (mouse)Not determined67554435692607450Mouse
1300674Nidd3n_mnon-insulin-dependent diabetes mellitus 3 in NSY (mouse)Not determined67554435694225955Mouse
10412195Efw_mepididymal fat weight (mouse)Not determined67554435694225955Mouse
10043901Pfat5_mpredicted fat percentage 5 (mouse)Not determined675607306109607450Mouse
10412208Cypr4_mcytokine production 4 (mouse)Not determined675716503109716697Mouse
1357875Pfat2_mpredicted fat percentage 2 (mouse)Not determined676463949110464093Mouse
13824985Alh1_mamplitude of lateral head displacement 1 (mouse)67800000097000000Mouse
4141376Dbm1_mdiabetes modifier 1 (mouse)Not determined678629504121115387Mouse
14696731Pairq1_mP. aeruginosa infection resistance QTL 1 (mouse)681500000102200000Mouse
10043864T2dm4sa_mtype 2 diabetes mellitus 4 in SMXA RI mice (mouse)Not determined683713869147052561Mouse
11251720Ewc4_methanol withdrawal and consumption 4 (mouse)684122513118122513Mouse
1301687Mnic2_mmacronutrient intake (mouse)Not determined686806805113544602Mouse
1301744Hdlq11_mHDL QTL 11 (mouse)Not determined687503360121503555Mouse
1301262Gasa3_mgastritis type A susceptibility locus 3 (mouse)Not determined689005405123005603Mouse
1301244Ichs_mimmediate cutaneous hypersensitivity QTL (mouse)Not determined690795610124795846Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:929
Count of miRNA genes:516
Interacting mature miRNAs:601
Transcripts:ENSMUST00000032180, ENSMUST00000132936, ENSMUST00000133092
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000032180   ⟹   ENSMUSP00000032180
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl691,363,981 - 91,411,363 (-)Ensembl
RefSeq Acc Id: ENSMUST00000132936
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl691,363,985 - 91,365,071 (-)Ensembl
RefSeq Acc Id: ENSMUST00000133092
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl691,363,983 - 91,365,097 (-)Ensembl
RefSeq Acc Id: NM_001363757   ⟹   NP_001350686
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39691,340,963 - 91,388,335 (-)NCBI
GRCm38691,363,981 - 91,411,353 (-)NCBI
Sequence:
RefSeq Acc Id: NM_009527   ⟹   NP_033553
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39691,340,963 - 91,388,335 (-)NCBI
GRCm38691,363,981 - 91,411,353 (-)NCBI
MGSCv37691,313,977 - 91,361,363 (-)RGD
Celera693,257,779 - 93,305,821 (-)RGD
cM Map6 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_036166027   ⟹   XP_036021920
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39691,340,963 - 91,386,493 (-)NCBI
Reference Sequences
RefSeq Acc Id: NP_033553   ⟸   NM_009527
- Peptide Label: isoform 1 precursor
- UniProtKB: P24383 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001350686   ⟸   NM_001363757
- Peptide Label: isoform 2 precursor
RefSeq Acc Id: ENSMUSP00000032180   ⟸   ENSMUST00000032180
RefSeq Acc Id: XP_036021920   ⟸   XM_036166027
- Peptide Label: isoform X1

Promoters
RGD ID:6840180
Promoter ID:MM_KWN:46918
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:OTTMUST00000053340,   OTTMUST00000053341
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36691,315,796 - 91,316,296 (-)MPROMDB
RGD ID:6840177
Promoter ID:MM_KWN:46919
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:OTTMUST00000052619
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36691,361,416 - 91,361,916 (-)MPROMDB
RGD ID:6890442
Promoter ID:EPDNEW_M8672
Type:multiple initiation site
Name:Wnt7a_1
Description:Mus musculus wingless-type MMTV integration site family, member7A , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38691,411,353 - 91,411,413EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:98961 AgrOrtholog
Ensembl Genes ENSMUSG00000030093 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Protein ENSMUSP00000032180 ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000032180 ENTREZGENE, UniProtKB/Swiss-Prot
Gene3D-CATH 3.30.2460.20 UniProtKB/Swiss-Prot
InterPro Wnt UniProtKB/Swiss-Prot
  Wnt7 UniProtKB/Swiss-Prot
  Wnt_C UniProtKB/Swiss-Prot
  Wnt_CS UniProtKB/Swiss-Prot
KEGG Report mmu:22421 UniProtKB/Swiss-Prot
MGD MGI:98961 ENTREZGENE
NCBI Gene 22421 ENTREZGENE
PANTHER PTHR12027 UniProtKB/Swiss-Prot
Pfam wnt UniProtKB/Swiss-Prot
PhenoGen Wnt7a PhenoGen
PRINTS WNT7PROTEIN UniProtKB/Swiss-Prot
  WNTPROTEIN UniProtKB/Swiss-Prot
PROSITE WNT1 UniProtKB/Swiss-Prot
SMART WNT1 UniProtKB/Swiss-Prot
UniProt P24383 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary Q80VH3 UniProtKB/Swiss-Prot
  Q9DBY3 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2014-07-01 Wnt7a  wingless-type MMTV integration site family, member 7A    wingless-related MMTV integration site 7A  Symbol and/or name change 5135510 APPROVED