Aldh3a2 (aldehyde dehydrogenase family 3, subfamily A2) - Rat Genome Database

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Gene: Aldh3a2 (aldehyde dehydrogenase family 3, subfamily A2) Mus musculus
Analyze
Symbol: Aldh3a2
Name: aldehyde dehydrogenase family 3, subfamily A2
RGD ID: 62158
MGI Page MGI
Description: Enables aldehyde dehydrogenase (NAD+) activity. Predicted to be involved in several processes, including hexadecanal metabolic process; nervous system development; and terpenoid metabolic process. Predicted to act upstream of or within fatty acid metabolic process. Located in endoplasmic reticulum and membrane. Is expressed in several structures, including alimentary system; decidua; early conceptus; nervous system; and sensory organ. Human ortholog(s) of this gene implicated in Sjogren-Larsson syndrome. Orthologous to human ALDH3A2 (aldehyde dehydrogenase 3 family member A2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: Ahd; Ahd-; Ahd-3; Ahd-3r; Ahd3; Ahd3-r; AI194803; alcohol dehydrogenase family 3, subfamily A2; Ald; aldehyde dehydrogenase 3; aldehyde dehydrogenase 4, liver microsomal (class 3) regulator; aldehyde dehydrogenase family 3 member A2; Aldh; Aldh4; Aldh4-r; FAL; FALDH; fatty aldehyde dehydrogenase; fatty aldehyde dehydrogenase variant form
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391161,114,240 - 61,158,267 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1161,114,243 - 61,158,290 (-)EnsemblGRCm39 Ensembl
GRCm381161,223,417 - 61,267,528 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1161,223,417 - 61,267,464 (-)EnsemblGRCm38mm10GRCm38
MGSCv371161,058,257 - 61,080,629 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361161,060,950 - 61,083,322 (-)NCBIMGSCv36mm8
MGSCv361161,674,448 - 61,696,820 (-)NCBIMGSCv36mm8
Cytogenetic Map11B2NCBI
cM Map1137.96NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-catechin  (ISO)
(+)-schisandrin B  (ISO)
(-)-epigallocatechin 3-gallate  (ISO)
(1->4)-beta-D-glucan  (EXP)
1,2,4-trimethylbenzene  (ISO)
1,2-dimethylhydrazine  (EXP)
17alpha-ethynylestradiol  (EXP,ISO)
17beta-estradiol  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (EXP)
2,2',4,4'-Tetrabromodiphenyl ether  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-hydroxyethyl methacrylate  (ISO)
2-methylcholine  (ISO)
3,3',4,4'-tetrachlorobiphenyl  (EXP)
3,3',5-triiodo-L-thyronine  (ISO)
3-chloropropane-1,2-diol  (ISO)
5-fluorouracil  (ISO)
acetaldehyde  (EXP)
acetamide  (ISO)
aconitine  (ISO)
acrolein  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (EXP)
alpha-pinene  (ISO)
amiodarone  (EXP)
ammonium chloride  (ISO)
antimonite  (ISO)
antirheumatic drug  (ISO)
aristolochic acid A  (ISO)
arsenite(3-)  (ISO)
arsenous acid  (ISO)
atrazine  (ISO)
benzo[a]pyrene  (EXP,ISO)
bexarotene  (ISO)
bezafibrate  (ISO)
bicalutamide  (ISO)
bis(2-ethylhexyl) phthalate  (EXP)
bisphenol A  (EXP,ISO)
Bisphenol B  (ISO)
bisphenol F  (ISO)
Brodifacoum  (ISO)
butan-1-ol  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
caffeine  (ISO)
captan  (EXP)
carbon nanotube  (EXP)
chloroform  (ISO)
ciprofibrate  (EXP)
cisplatin  (ISO)
clofibrate  (EXP)
clofibric acid  (EXP)
cobalt dichloride  (ISO)
copper(II) sulfate  (ISO)
crotonaldehyde  (ISO)
cycloheximide  (ISO)
cyclosporin A  (EXP,ISO)
dextran sulfate  (EXP)
diarsenic trioxide  (ISO)
dibenzofuran  (ISO)
dibutyl phthalate  (EXP)
dichloroacetic acid  (EXP)
diclofenac  (EXP)
dicrotophos  (ISO)
dipotassium bis[mu-tartrato(4-)]diantimonate(2-) trihydrate  (ISO)
diuron  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
endosulfan  (ISO)
epoxiconazole  (EXP)
erythromycin estolate  (ISO)
finasteride  (ISO)
folic acid  (EXP)
folpet  (EXP)
fumonisin B1  (EXP)
genistein  (ISO)
gentamycin  (ISO)
glafenine  (ISO)
indometacin  (ISO)
inulin  (EXP)
isoprenaline  (EXP)
ivermectin  (ISO)
lead(0)  (ISO)
lipopolysaccharide  (ISO)
methapyrilene  (ISO)
N-nitrosodiethylamine  (EXP)
nefazodone  (ISO)
nickel sulfate  (ISO)
ochratoxin A  (ISO)
ozone  (ISO)
paracetamol  (EXP,ISO)
perfluorohexanesulfonic acid  (EXP)
perfluorononanoic acid  (EXP)
perfluorooctane-1-sulfonic acid  (EXP)
perfluorooctanoic acid  (EXP,ISO)
permethrin  (EXP)
phenobarbital  (EXP,ISO)
PhIP  (ISO)
phlorizin  (EXP)
phytol  (EXP)
picoxystrobin  (ISO)
pirinixic acid  (EXP,ISO)
potassium chromate  (ISO)
pregnenolone 16alpha-carbonitrile  (EXP)
quercetin  (ISO)
resveratrol  (EXP,ISO)
rotenone  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
SB 431542  (ISO)
sodium arsenite  (ISO)
sodium dichromate  (EXP)
sodium fluoride  (EXP)
sulforaphane  (ISO)
sulindac  (ISO)
sunitinib  (ISO)
tamoxifen  (EXP)
Tanshinone I  (ISO)
temozolomide  (ISO)
tert-butyl hydroperoxide  (ISO)
Tesaglitazar  (ISO)
tetrachloroethene  (EXP)
tetrachloromethane  (EXP,ISO)
tetracycline  (ISO)
thapsigargin  (ISO)
thimerosal  (ISO)
thioacetamide  (ISO)
titanium dioxide  (EXP)
tolcapone  (ISO)
trichloroethene  (EXP)
trichostatin A  (ISO)
triptonide  (EXP)
troglitazone  (EXP)
valproic acid  (EXP,ISO)
vinclozolin  (ISO)
Yessotoxin  (ISO)
zoledronic acid  (ISO)

References

References - curated
# Reference Title Reference Citation
1. Genes associated with immunoglobulin V(D)J recombination are linked on mouse chromosome 2 and human chromosome 11. Huppi K, etal., Immunogenetics 1993;37(4):288-91.
2. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
6. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
7. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
8. Mouse MP Annotation Import Pipeline RGD automated import pipeline
9. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
10. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:1520328   PMID:1935685   PMID:2044153   PMID:7274657   PMID:7337695   PMID:7606739   PMID:7713516   PMID:8634152   PMID:9027499   PMID:9192162   PMID:9457670   PMID:9529344  
PMID:10049592   PMID:10349636   PMID:10464095   PMID:10922068   PMID:11042159   PMID:11073717   PMID:11076861   PMID:11160382   PMID:11217851   PMID:12128098   PMID:12477932   PMID:12865426  
PMID:14610273   PMID:14638678   PMID:14681479   PMID:15782199   PMID:16141072   PMID:16141073   PMID:17273973   PMID:17510064   PMID:18614015   PMID:18971422   PMID:21124890   PMID:21267068  
PMID:21677750   PMID:21873635   PMID:23260145   PMID:25286108   PMID:26124079   PMID:27053112   PMID:27113764   PMID:28245920   PMID:28378742   PMID:29518331   PMID:30085884   PMID:30550785  
PMID:32458004   PMID:32554809   PMID:34370553  


Genomics

Comparative Map Data
Aldh3a2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391161,114,240 - 61,158,267 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1161,114,243 - 61,158,290 (-)EnsemblGRCm39 Ensembl
GRCm381161,223,417 - 61,267,528 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1161,223,417 - 61,267,464 (-)EnsemblGRCm38mm10GRCm38
MGSCv371161,058,257 - 61,080,629 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361161,060,950 - 61,083,322 (-)NCBIMGSCv36mm8
MGSCv361161,674,448 - 61,696,820 (-)NCBIMGSCv36mm8
Cytogenetic Map11B2NCBI
cM Map1137.96NCBI
ALDH3A2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381719,648,136 - 19,677,596 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1719,648,136 - 19,685,760 (+)EnsemblGRCh38hg38GRCh38
GRCh371719,551,449 - 19,580,909 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361719,492,656 - 19,521,500 (+)NCBINCBI36Build 36hg18NCBI36
Build 341719,492,682 - 19,521,495NCBI
Celera1716,965,422 - 16,994,253 (+)NCBICelera
Cytogenetic Map17p11.2NCBI
HuRef1718,931,182 - 18,960,005 (+)NCBIHuRef
CHM1_11719,560,917 - 19,589,757 (+)NCBICHM1_1
T2T-CHM13v2.01719,596,758 - 19,626,215 (+)NCBIT2T-CHM13v2.0
Aldh3a2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81046,427,789 - 46,448,449 (-)NCBIGRCr8
mRatBN7.21045,928,313 - 45,949,366 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1045,908,524 - 45,949,281 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1050,630,818 - 50,651,382 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01050,121,209 - 50,141,773 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01045,624,781 - 45,645,345 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01047,525,486 - 47,546,535 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1047,525,493 - 47,546,345 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01047,300,324 - 47,321,002 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41047,400,518 - 47,421,064 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11047,414,148 - 47,434,687 (-)NCBI
Celera1045,182,182 - 45,202,711 (-)NCBICelera
Cytogenetic Map10q22NCBI
Aldh3a2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955467140,760 - 162,742 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955467141,592 - 162,376 (-)NCBIChiLan1.0ChiLan1.0
ALDH3A2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21954,640,441 - 54,683,013 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11759,452,286 - 59,494,725 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01731,455,386 - 31,482,985 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11736,599,830 - 36,628,102 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1736,599,835 - 36,628,102 (-)Ensemblpanpan1.1panPan2
ALDH3A2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1540,515,768 - 40,641,377 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl540,515,030 - 40,641,463 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha540,657,648 - 40,782,777 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0540,621,779 - 40,644,870 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0540,676,970 - 40,739,907 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1540,593,134 - 40,717,947 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0540,538,776 - 40,664,129 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0540,731,446 - 40,856,529 (-)NCBIUU_Cfam_GSD_1.0
Aldh3a2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560260,436,975 - 60,460,173 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936881127,023 - 150,292 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936881127,090 - 150,269 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ALDH3A2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1259,936,848 - 59,954,358 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11259,936,838 - 59,953,677 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21262,591,931 - 62,608,903 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ALDH3A2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11618,213,284 - 18,241,261 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1618,213,487 - 18,239,271 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660592,605,746 - 2,633,744 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Aldh3a2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248495,912,273 - 5,938,007 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248495,911,711 - 5,941,706 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Aldh3a2
1542 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1604
Count of miRNA genes:722
Interacting mature miRNAs:935
Transcripts:ENSMUST00000066277, ENSMUST00000074127, ENSMUST00000108715, ENSMUST00000128991, ENSMUST00000141368, ENSMUST00000147291, ENSMUST00000149298
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4141582Lgaq1_mlate growth adjusted QTL 1 (mouse)Not determined1226863768500330Mouse
1301896Tria1_mT-cell receptor induced activation 1 (mouse)Not determined113661356570613855Mouse
1301830Ssta4_msusceptibility to Salmonella typhimurium antigens 4 (mouse)Not determined115007819184078411Mouse
1300905Scc6_mcolon tumor susceptibility 6 (mouse)Not determined11688027789019734Mouse
1559002Lmrq4_mLeishmania major resistance QTL 4 (mouse)Not determined111226863769684947Mouse
1302186Blmpf2_mbleomycin-induced pulmonary fibrosis 2 (mouse)Not determined115406567067078411Mouse
1300664Etohcta9_methanol conditioned taste aversion 9 (mouse)Not determined115775466091754758Mouse
4141966Tailq1_mtail length QTL 1 (mouse)Not determined1226863768500330Mouse
1357878Mastr_mmodifier of astrocytoma (mouse)Not determined114570858189818733Mouse
4141830Pregq1_mpregnancy QTL 1 (mouse)Not determined115412675283733652Mouse
4141982Skts-fp2_mskin tumor susceptibility in FVB and PWK 2 (mouse)Not determined5871926685066529Mouse
4142109W10q2_mweight 10 weeks QTL 2 (mouse)Not determined1226863768500330Mouse
1357851Scfq3_msubcutaneous fat pad weight QTL 3 (mouse)Not determined111226863768500330Mouse
1301328Mol4_mmodifier of LPS-response 4 (mouse)Not determined113628257783481356Mouse
1301426Desp2_mdespair 2 (mouse)Not determined112870858162708700Mouse
13208569Bmiq10_mbody mass index QTL 10 (mouse)113589082784890826Mouse
1301788Lbw8_mlupus NZB x NZW 8 (mouse)Not determined113650328770509492Mouse
1357844Si5lq5_mserum IGFBP-5 level QTL 5 (mouse)Not determined112816587362165976Mouse
1301988Bmd11_mbone mineral density 11 (mouse)Not determined114631940780319522Mouse
26884446Sklq10_mskull length QTL 10, 10 week (mouse)11325000062890826Mouse
26884453Sklq16_mskull length QTL 16, 16 week (mouse)11325000072690826Mouse
26884401Huml4_mhumerus length 4, 10 week (mouse)111155000068490826Mouse
27226762Feml21_mfemur length 21, 16 week (mouse)111175000065990826Mouse
13524848Ppiq7_mprepulse inhibition QTL 7 (mouse)112856914762569147Mouse
10766457Nwa3_mNew Zealand White autoimmunity 3 (mouse)113801611572016209Mouse
1300774Pgia7_mproteoglycan induced arthritis 7 (mouse)Not determined115339058887390737Mouse
4141875Etax9_methanol induced ataxia 9 (mouse)Not determined5528498572209927Mouse
4142121Tmc1m2_mTmc1 modifier 2 (mouse)Not determined1156864027114157957Mouse
4141853Skmw17_mskeletal muscle weight 17 (mouse)Not determined113708094171081064Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44630038113058009Mouse
1302021Nidd1n_mnon-insulin-dependent diabetes mellitus 1 in NSY (mouse)Not determined114516587379978324Mouse
27226738Metcl11_mmetatarsal-calcaneal length 11, 10 week (mouse)11885000061390826Mouse
1357437Epfq4_mepididymal fat pad weight QTL 4 (mouse)Not determined111226863768500330Mouse
13208559Wght10_mweight 10 (mouse)11395000088890826Mouse
4142216Lgq1_mlate growth QTL 1 (mouse)Not determined1226863768500330Mouse
1357720Kidpq1_mkidney weight percentage QTL 1 (mouse)Not determined111226863768500330Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112268637118022724Mouse
10412246Dfs2_mdental fluorosis suseptibility 2 (mouse)Not determined112180736495881231Mouse
1300765Bbaa4_mB.burgdorferi-associated arthritis 4 (mouse)Not determined114618516780185262Mouse
4142148Ckdbp2_mchronic kidney disease blood pressure locus 2 (mouse)Not determined115408094165103841Mouse
10053687Eae6_msusceptibility to experimental allergic encephalomyelitis 6 (mouse)Not determined111778196668500330Mouse
4141127W3q4_mweight 3 weeks QTL 4 (mouse)Not determined1226863768500330Mouse
4142308W6q3_mweight 6 weeks QTL 3 (mouse)Not determined111226863768500330Mouse
4141894Nidd6k_mNidd6 on KK-A (mouse)Not determined1912420496897826Mouse
4141084Spqq1_msperm quality QTL 1 (mouse)Not determined5406567063319522Mouse
13208558Lgth12_mbody length 12 (mouse)11395000094890826Mouse
11532698Sluc36a_msusceptibility to lung cancer 36a (mouse)114225661776256730Mouse
4142300Ctrq3_mC. trachomatis resistance QTL 3 (mouse)Not determined114463003876854757Mouse
13524840Ppiq9a_mprepulse inhibition QTL 9a (mouse)115249438586494385Mouse
10053682Eae45_mexperimental allergic encephalomyelitis susceptibility 45 (mouse)Not determined115849055574754758Mouse
1357640Orq2_movulation rate QTL 2 (mouse)Not determined111226863768500330Mouse
1558945Orgwq8_morgan weight QTL 8 (mouse)Not determined111705617567078411Mouse
11522752Cocia18_mcocaine-induced activity, QTL 18 (mouse)113100820965008209Mouse
11059563Lmr31_mleishmaniasis resistance 31 (mouse)113210057766100694Mouse
11532697Sluc36_msusceptibility to lung cancer 36 (mouse)115925661769482699Mouse
4141470Egq4_mearly growth QTL 4 (mouse)Not determined1226863768500330Mouse
11532699Sluc36b_msusceptibility to lung cancer 36b (mouse)114225661776256730Mouse
1357782Char8_mP. chabaudi malaria resistance QTL 8 (mouse)Not determined113557861669684987Mouse
1300924Ity2_mimmunity to S. typhimurium 2 (mouse)Not determined15850803087695238Mouse

Markers in Region
U14390  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381161,245,981 - 61,246,073UniSTSGRCm38
MGSCv371161,059,483 - 61,059,575UniSTSGRCm37
Cytogenetic Map11B2UniSTS
cM Map1134.3UniSTS
Whitehead/MRC_RH11804.56UniSTS
AI194803  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381161,245,017 - 61,245,103UniSTSGRCm38
MGSCv371161,058,519 - 61,058,605UniSTSGRCm37
Cytogenetic Map11B2UniSTS
cM Map1134.3UniSTS
Whitehead/MRC_RH11823.39UniSTS
Aldh3a2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381161,245,018 - 61,245,897UniSTSGRCm38
MGSCv371161,058,520 - 61,059,399UniSTSGRCm37
Cytogenetic Map11B2UniSTS
cM Map1134.3UniSTS
cM Map1134.3UniSTS
RH140634  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381161,264,299 - 61,265,229UniSTSGRCm38
MGSCv371161,077,801 - 61,078,731UniSTSGRCm37
Cytogenetic Map11B2UniSTS
cM Map1134.3UniSTS
Aldh3a2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map11B2UniSTS
cM Map1134.3UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001331114 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001331115 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001417306 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_007437 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_138545 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006532030 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006532031 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_388331 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_388332 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AH010316 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK051219 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK078243 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK079571 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK079639 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK086262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK140932 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK148462 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK152156 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK152735 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK152800 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK159246 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK163040 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK169157 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK170195 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK170251 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK186928 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK188042 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK192800 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK198241 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK198407 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK209787 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL646093 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL672172 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AV373678 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC003797 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U14390 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000066277   ⟹   ENSMUSP00000067767
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1161,114,243 - 61,158,011 (-)Ensembl
GRCm38.p6 Ensembl1161,223,417 - 61,267,185 (-)Ensembl
RefSeq Acc Id: ENSMUST00000074127   ⟹   ENSMUSP00000073764
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1161,135,679 - 61,158,011 (-)Ensembl
GRCm38.p6 Ensembl1161,244,853 - 61,267,185 (-)Ensembl
RefSeq Acc Id: ENSMUST00000108715   ⟹   ENSMUSP00000104355
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1161,138,353 - 61,158,011 (-)Ensembl
GRCm38.p6 Ensembl1161,247,527 - 61,267,185 (-)Ensembl
RefSeq Acc Id: ENSMUST00000128991
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1161,154,996 - 61,157,953 (-)Ensembl
GRCm38.p6 Ensembl1161,264,170 - 61,267,127 (-)Ensembl
RefSeq Acc Id: ENSMUST00000141368
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1161,139,898 - 61,153,161 (-)Ensembl
GRCm38.p6 Ensembl1161,249,072 - 61,262,335 (-)Ensembl
RefSeq Acc Id: ENSMUST00000147291
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1161,147,661 - 61,158,290 (-)Ensembl
GRCm38.p6 Ensembl1161,256,835 - 61,267,464 (-)Ensembl
RefSeq Acc Id: ENSMUST00000149298
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1161,156,050 - 61,158,267 (-)Ensembl
GRCm38.p6 Ensembl1161,265,224 - 61,267,441 (-)Ensembl
RefSeq Acc Id: ENSMUST00000208086   ⟹   ENSMUSP00000147199
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1161,135,679 - 61,141,836 (-)Ensembl
GRCm38.p6 Ensembl1161,244,853 - 61,251,010 (-)Ensembl
RefSeq Acc Id: NM_001331114   ⟹   NP_001318043
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391161,135,579 - 61,157,953 (-)NCBI
GRCm381161,244,752 - 61,267,186 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001331115   ⟹   NP_001318044
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391161,135,579 - 61,158,267 (-)NCBI
GRCm381161,244,752 - 61,267,528 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001417306   ⟹   NP_001404235
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391161,135,579 - 61,158,267 (-)NCBI
RefSeq Acc Id: NM_007437   ⟹   NP_031463
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391161,135,579 - 61,157,953 (-)NCBI
GRCm381161,244,752 - 61,267,186 (-)NCBI
MGSCv371161,058,257 - 61,080,629 (-)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_138545
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391161,114,240 - 61,158,267 (-)NCBI
GRCm381161,223,417 - 61,267,528 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006532030   ⟹   XP_006532093
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391161,138,755 - 61,158,032 (-)NCBI
GRCm381161,247,929 - 61,267,187 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006532031   ⟹   XP_006532094
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391161,115,312 - 61,158,032 (-)NCBI
GRCm381161,224,486 - 61,267,187 (-)NCBI
Sequence:
RefSeq Acc Id: XR_388331
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391161,115,312 - 61,158,032 (-)NCBI
GRCm381161,224,486 - 61,267,187 (-)NCBI
Sequence:
RefSeq Acc Id: XR_388332
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391161,115,312 - 61,158,032 (-)NCBI
GRCm381161,224,486 - 61,267,187 (-)NCBI
Sequence:
RefSeq Acc Id: NP_031463   ⟸   NM_007437
- Peptide Label: isoform 2
- UniProtKB: Q99L64 (UniProtKB/Swiss-Prot),   P47740 (UniProtKB/Swiss-Prot),   Q3U7B5 (UniProtKB/TrEMBL),   Q8C3C9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006532094   ⟸   XM_006532031
- Peptide Label: isoform X2
- UniProtKB: Q3U7B5 (UniProtKB/TrEMBL),   Q8C3C9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006532093   ⟸   XM_006532030
- Peptide Label: isoform X1
- UniProtKB: B1AV77 (UniProtKB/TrEMBL),   Q8BQ93 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001318044   ⟸   NM_001331115
- Peptide Label: isoform 3
- UniProtKB: Q99PH4 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001318043   ⟸   NM_001331114
- Peptide Label: isoform 1
- UniProtKB: Q99PH4 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSMUSP00000067767   ⟸   ENSMUST00000066277
RefSeq Acc Id: ENSMUSP00000073764   ⟸   ENSMUST00000074127
RefSeq Acc Id: ENSMUSP00000147199   ⟸   ENSMUST00000208086
RefSeq Acc Id: ENSMUSP00000104355   ⟸   ENSMUST00000108715
RefSeq Acc Id: NP_001404235   ⟸   NM_001417306
- Peptide Label: isoform 4
- UniProtKB: Q3U7B5 (UniProtKB/TrEMBL),   Q8C3C9 (UniProtKB/TrEMBL)
Protein Domains
Aldehyde dehydrogenase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P47740-F1-model_v2 AlphaFold P47740 1-484 view protein structure

Promoters
RGD ID:6820366
Promoter ID:MM_KWN:7766
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Liver
Transcripts:OTTMUST00000012938
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361161,075,526 - 61,076,427 (-)MPROMDB
RGD ID:6820365
Promoter ID:MM_KWN:7767
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000071413,   ENSMUST00000074127,   ENSMUST00000102664,   OTTMUST00000012932,   OTTMUST00000012934,   OTTMUST00000012935,   OTTMUST00000012936,   OTTMUST00000012937
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361161,080,546 - 61,081,172 (-)MPROMDB
RGD ID:8674926
Promoter ID:EPDNEW_M15493
Type:initiation region
Name:Aldh3a2_1
Description:Mus musculus aldehyde dehydrogenase family 3, subfamily A2 ,transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381161,267,127 - 61,267,187EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1353452 AgrOrtholog
Ensembl Genes ENSMUSG00000010025 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000066277.10 UniProtKB/TrEMBL
  ENSMUST00000074127 ENTREZGENE
  ENSMUST00000074127.14 UniProtKB/Swiss-Prot
  ENSMUST00000108715 ENTREZGENE
  ENSMUST00000108715.3 UniProtKB/TrEMBL
  ENSMUST00000208086.2 UniProtKB/TrEMBL
InterPro Ald_DH/histidinol_DH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ald_DH_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ald_DH_CS_CYS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ald_DH_CS_GLU UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ald_DH_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Aldehyde_DH_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Aldehyde_DH_NAD(P) UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:11671 UniProtKB/Swiss-Prot
MGD MGI:1353452 ENTREZGENE
NCBI Gene 11671 ENTREZGENE
PANTHER ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER A2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR43570 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Aldedh UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Aldh3a2 PhenoGen
PIRSF ALDH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE ALDEHYDE_DEHYDR_CYS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ALDEHYDE_DEHYDR_GLU UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF53720 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A140LJF9_MOUSE UniProtKB/TrEMBL
  AL3A2_MOUSE UniProtKB/Swiss-Prot
  B1ATI0_MOUSE UniProtKB/TrEMBL
  B1AV77 ENTREZGENE, UniProtKB/TrEMBL
  P47740 ENTREZGENE
  Q3U7B5 ENTREZGENE, UniProtKB/TrEMBL
  Q8BQ93 ENTREZGENE, UniProtKB/TrEMBL
  Q8C3C9 ENTREZGENE, UniProtKB/TrEMBL
  Q99L64 ENTREZGENE
  Q99PH3_MOUSE UniProtKB/TrEMBL
  Q99PH4 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary Q99L64 UniProtKB/Swiss-Prot