Slc17a6 (solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6) - Rat Genome Database

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Gene: Slc17a6 (solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6) Mus musculus
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Symbol: Slc17a6
Name: solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6
RGD ID: 730913
MGI Page MGI
Description: Enables L-glutamate uniporter activity; potassium:proton antiporter activity; and sodium:phosphate symporter activity. Involved in several processes, including L-glutamate transmembrane transport; hyaloid vascular plexus regression; and sodium-dependent phosphate transport. Acts upstream of or within neurotransmitter uptake. Located in synaptic vesicle. Is expressed in several structures, including cranial ganglion; nervous system; sensory organ; tail mesenchyme; and testis. Orthologous to human SLC17A6 (solute carrier family 17 member 6).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 2900073D12Rik; differentiation-associated BNPI; differentiation-associated Na(+)-dependent inorganic phosphate cotransporter; DNPI; solute carrier family 17 (vesicular glutamate transporter), member 6; solute carrier family 17 member 6; vesicular glutamate transporter 2; VGLU; VGLUT2
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39751,271,578 - 51,320,874 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl751,271,754 - 51,320,867 (+)EnsemblGRCm39 Ensembl
GRCm38751,621,830 - 51,671,126 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl751,622,006 - 51,671,119 (+)EnsemblGRCm38mm10GRCm38
MGSCv37758,877,200 - 58,926,496 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36751,490,086 - 51,539,138 (+)NCBIMGSCv36mm8
Celera749,002,489 - 49,051,776 (+)NCBICelera
Cytogenetic Map7B4NCBI
cM Map732.78NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal associative learning  (IAGP)
abnormal CNS synaptic transmission  (IAGP)
abnormal conditioned taste aversion behavior  (IAGP)
abnormal dendrite morphology  (IAGP)
abnormal dendritic spine morphology  (IAGP)
abnormal dopaminergic neuron morphology  (IAGP)
abnormal eating behavior  (IAGP)
abnormal excitatory postsynaptic currents  (IAGP)
abnormal glutamate-mediated receptor currents  (IAGP)
abnormal hormone level  (IAGP)
abnormal locomotor activation  (IAGP)
abnormal miniature excitatory postsynaptic currents  (IAGP)
abnormal motor capabilities/coordination/movement  (IAGP)
abnormal nervous system physiology  (IAGP)
abnormal pain threshold  (IAGP)
abnormal postnatal growth/weight/body size  (IAGP)
abnormal pre-Botzinger complex physiology  (IAGP)
abnormal reflex  (IAGP)
abnormal spatial learning  (IAGP)
abnormal spatial reference memory  (IAGP)
abnormal synaptic vesicle morphology  (IAGP)
abnormal synaptic vesicle number  (IAGP)
absence of AMPA-mediated synaptic currents  (IAGP)
cyanosis  (IAGP)
decreased birth body size  (IAGP)
decreased body size  (IAGP)
decreased chemically-elicited antinociception  (IAGP)
decreased circulating adrenaline level  (IAGP)
decreased circulating glucagon level  (IAGP)
decreased dopamine level  (IAGP)
decreased fetal weight  (IAGP)
decreased miniature excitatory postsynaptic current amplitude  (IAGP)
decreased miniature excitatory postsynaptic current frequency  (IAGP)
decreased physiological sensitivity to xenobiotic  (IAGP)
decreased synaptic glutamate release  (IAGP)
enlarged third ventricle  (IAGP)
excessive scratching  (IAGP)
hunched posture  (IAGP)
hypoglycemia  (IAGP)
impaired behavioral response to cocaine  (IAGP)
impaired contextual conditioning behavior  (IAGP)
impaired coordination  (IAGP)
impaired cued conditioning behavior  (IAGP)
increased body fat mass  (IAGP)
increased body length  (IAGP)
increased body weight  (IAGP)
increased excitatory postsynaptic current amplitude  (IAGP)
increased exploration in new environment  (IAGP)
increased food intake  (IAGP)
increased paired-pulse ratio  (IAGP)
increased pruritus  (IAGP)
increased thermal nociceptive threshold  (IAGP)
increased total body fat amount  (IAGP)
mixed cellular infiltration to dermis  (IAGP)
neonatal lethality, complete penetrance  (IAGP)
no abnormal phenotype detected  (IAGP)
obese  (IAGP)
polyphagia  (IAGP)
postnatal lethality, complete penetrance  (IAGP)
preweaning lethality, complete penetrance  (IEA)
reduced long-term depression  (IAGP)
respiratory failure  (IAGP)
skin lesions  (IAGP)
thick epidermis  (IAGP)
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. Age and meloxicam modify the response of the glutamate vesicular transporters (VGLUTs) after transient global cerebral ischemia in the rat brain. Llorente IL, etal., Brain Res Bull. 2013 May;94:90-7. doi: 10.1016/j.brainresbull.2013.02.006. Epub 2013 Feb 28.
3. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
4. MGDs mouse GO annotations MGD data from the GO Consortium
5. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
6. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
7. Mouse MP Annotation Import Pipeline RGD automated import pipeline
8. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
9. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
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PMID:36493974   PMID:36497060   PMID:36517461   PMID:36543829   PMID:36573432   PMID:36574675   PMID:36577371   PMID:36604429   PMID:36606699   PMID:36640317   PMID:36656714   PMID:36670467  
PMID:36690899   PMID:36701202   PMID:36759751   PMID:36774552   PMID:36796706   PMID:36807640   PMID:36893756   PMID:36894577   PMID:36924980   PMID:36959418   PMID:36965483   PMID:36973009  
PMID:37001500   PMID:37076594   PMID:37078546   PMID:37095092   PMID:37171957   PMID:37188723   PMID:37192624   PMID:37295418   PMID:37311832   PMID:37321992   PMID:37364998   PMID:37390208  
PMID:37390830   PMID:37414552   PMID:37449644   PMID:37451329   PMID:37474763   PMID:37490921   PMID:37531957   PMID:37537242   PMID:37549297   PMID:37557174   PMID:37590134   PMID:37594894  
PMID:37624694   PMID:37632750   PMID:37652003   PMID:37674083   PMID:37686246   PMID:37701578   PMID:37751356   PMID:37758766   PMID:37773501   PMID:37794596   PMID:37848937   PMID:37889748  
PMID:37909037   PMID:37914931   PMID:37968120   PMID:37983249   PMID:38014224   PMID:38036057   PMID:38056455   PMID:38086374   PMID:38190982   PMID:38194970   PMID:38195566   PMID:38242086  
PMID:38245542   PMID:38266645   PMID:38278147   PMID:38282977   PMID:38344749   PMID:38345254   PMID:38355793   PMID:38359827   PMID:38360746   PMID:38370359   PMID:38377990   PMID:38383587  
PMID:38417435   PMID:38430912   PMID:38438260   PMID:38448588   PMID:38452069   PMID:38452762   PMID:38484733   PMID:38514178   PMID:38518778   PMID:38538787   PMID:38565684   PMID:38570488  
PMID:38583149   PMID:38669335   PMID:38679281   PMID:38733990   PMID:38736483   PMID:38740778   PMID:38748514   PMID:38762463   PMID:38868198   PMID:38871457   PMID:38941461   PMID:39035036  


Genomics

Comparative Map Data
Slc17a6
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39751,271,578 - 51,320,874 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl751,271,754 - 51,320,867 (+)EnsemblGRCm39 Ensembl
GRCm38751,621,830 - 51,671,126 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl751,622,006 - 51,671,119 (+)EnsemblGRCm38mm10GRCm38
MGSCv37758,877,200 - 58,926,496 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36751,490,086 - 51,539,138 (+)NCBIMGSCv36mm8
Celera749,002,489 - 49,051,776 (+)NCBICelera
Cytogenetic Map7B4NCBI
cM Map732.78NCBI
SLC17A6
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381122,338,381 - 22,379,503 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1122,338,381 - 22,379,503 (+)EnsemblGRCh38hg38GRCh38
GRCh371122,359,927 - 22,401,049 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361122,316,243 - 22,357,619 (+)NCBINCBI36Build 36hg18NCBI36
Build 341122,316,242 - 22,357,619NCBI
Celera1122,492,722 - 22,534,075 (+)NCBICelera
Cytogenetic Map11p14.3NCBI
HuRef1122,042,899 - 22,084,263 (+)NCBIHuRef
CHM1_11122,359,385 - 22,400,763 (+)NCBICHM1_1
T2T-CHM13v2.01122,458,971 - 22,500,075 (+)NCBIT2T-CHM13v2.0
Slc17a6
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81110,348,447 - 110,388,499 (+)NCBIGRCr8
mRatBN7.21101,212,489 - 101,252,543 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1101,212,489 - 101,252,542 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1106,619,563 - 106,659,620 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01115,091,464 - 115,131,521 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01108,395,898 - 108,436,013 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01106,980,463 - 107,038,717 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1106,998,623 - 107,038,704 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01108,040,511 - 108,080,524 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41101,425,975 - 101,466,023 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11101,504,085 - 101,544,133 (+)NCBI
Celera195,386,910 - 95,426,949 (+)NCBICelera
Cytogenetic Map1q22NCBI
Slc17a6
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554762,813,368 - 2,854,514 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554762,813,368 - 2,854,371 (+)NCBIChiLan1.0ChiLan1.0
SLC17A6
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2924,627,830 - 24,669,284 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11124,591,980 - 24,633,414 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01122,350,537 - 22,392,009 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11122,257,983 - 22,299,443 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1122,258,011 - 22,301,944 (+)Ensemblpanpan1.1panPan2
SLC17A6
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12144,015,161 - 44,056,286 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2144,016,133 - 44,054,931 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2143,491,537 - 43,529,754 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02145,131,589 - 45,172,308 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2145,132,360 - 45,172,255 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12144,132,863 - 44,170,882 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02144,305,349 - 44,343,374 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02144,698,060 - 44,736,170 (+)NCBIUU_Cfam_GSD_1.0
Slc17a6
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494740,843,801 - 40,886,442 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366543,040,312 - 3,083,669 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366543,039,825 - 3,082,788 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC17A6
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl237,098,992 - 37,138,475 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1237,098,983 - 37,138,935 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2240,309,860 - 40,349,435 (-)NCBISscrofa10.2Sscrofa10.2susScr3
SLC17A6
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1142,634,754 - 42,677,309 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl142,636,512 - 42,677,165 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666038139,944,822 - 139,988,881 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Slc17a6
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476613,335,130 - 13,376,712 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476613,335,186 - 13,376,634 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Slc17a6
1614 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:468
Count of miRNA genes:326
Interacting mature miRNAs:372
Transcripts:ENSMUST00000032710
Prediction methods:Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
25314307Mlh1fc2_mMLH1 foci count 2 (mouse)76502999133501729Mouse
1301969Lbw5_mlupus NZB x NZW 5 (mouse)Not determined72684761560851775Mouse
25314304Vmm1_mvariable multisystem mineralization 1, muzzle (mouse)74714974856549748Mouse
1357586Mdmsc3_mmodifier of muscularity 3 (mouse)Not determined73444786968448018Mouse
38501068Tip1_mtuberculosis immunophenotype 1, spleen CFU (mouse)7360299972549748Mouse
39128210Lwq19_mliver weight QTL 19 (mouse)73349772758148965Mouse
11252140Fdr1_mfat response to dietary restriction 1 (mouse)74114882075148965Mouse
1357469Kidq5_mkidney weight QTL 5 (mouse)Not determined73349772758148965Mouse
1301082Bbaa16_mB.burgdorferi-associated arthritis 16 (mouse)Not determined736280015116416877Mouse
4142003W3q10_mweight 3 weeks QTL 10 (mouse)Not determined3349772758148965Mouse
12790989Tgl6_mtriglyceride 6 (mouse)72754054961540549Mouse
1559000Ossc1_mosteosarcoma susceptibility 1 (mouse)Not determined73405302568053223Mouse
10043926Bw1n_mbody weight 1 in NSY (mouse)Not determined745161966118693530Mouse
12792978Fbmd3_mfemoral bone mineral density 3, females only (mouse)77050288142367832Mouse
4141805Sle19_msystematic lupus erythematosus susceptibility 19 (mouse)Not determined3003248581135653Mouse
1357634Splq7_mspleen weight QTL 7 (mouse)Not determined73349772758148965Mouse
4141929Chlq18_mcirculating hormone level QTL 18 (mouse)Not determined74114882075148965Mouse
1300996Aorls2_maortic lesion size 2 (mouse)Not determined73239453266394681Mouse
1301514Rigs1_mradiation induced gastroschisis 1 (mouse)Not determined73628001592394346Mouse
1300878Skts1_mskin tumor susceptibility 1 (mouse)Not determined73789138671891582Mouse
1301709Bdt4_mbone density traits 4 (mouse)Not determined72288857256888716Mouse
1300722Sle3_msystemic lupus erythmatosus susceptibility 3 (mouse)Not determined7351172887142720Mouse
12904742Litsq2_mlitter size QTL 2 (mouse)72267388756674033Mouse
1301175Ap7q_malcohol preference 7 QTL (mouse)Not determined73171484565715077Mouse
1300791Abbp3_mA/J and C57BL/6 blood pressure 3 (mouse)Not determined739673887103510010Mouse
1301622Eae12_msusceptibility to experimental allergic encephalomyelitis 12 (mouse)Not determined71928001553280104Mouse
11354952Pdcc1_mplasmacytoid dentritic cell compartment 1 (mouse)72306653157066531Mouse
12880417V125Dq5_mvitamin D active form serum level QTL 5 (mouse)74524974879249748Mouse
10402488Dipa2_mdrug induced psychomotor activation 2 (mouse)Not determined73842154872421684Mouse
4142102Tailq5_mtail length QTL 5 (mouse)Not determined3349772758148965Mouse
10054064Bwq11_mbody weight QTL 11 (mouse)Not determined75112495485125093Mouse
4141909W10q18_mweight 10 weeks QTL 18 (mouse)Not determined3349772758148965Mouse
11532741Tbrs5_mtuberculosis resistance 5 (mouse)74915922783235415Mouse
1357752Tabw_mtally ho asscoiated body weight (mouse)Not determined74919327883193390Mouse
10053685Eae43_mexperimental allergic encephalomyelitis susceptibility 43 (mouse)Not determined75112495485125093Mouse
26884404Huml1_mhumerus length 1, 5 week (mouse)730199425108999207Mouse
1302141Fcsa6_mfemoral cross-sectional area 6 (mouse)Not determined74838446182384607Mouse
1301052Bhr6_mbronchial hyperresponsiveness 6 (mouse)Not determined71984225053842367Mouse
1357883Epfq5_mepididymal fat pad weight QTL 5 (mouse)Not determined73349772758148965Mouse
10045622Heal20_mwound healing/regeneration 20 (mouse)Not determined73431688768317043Mouse
1301158Eae4_msusceptibility to experimental allergic encephalomyelitis 4 (mouse)Not determined719147398141919804Mouse
4142218W6q17_mweight 6 weeks QTL 17 (mouse)Not determined3349772758148965Mouse
12738423Lfibq6_mliver fibrosis QTL 6 (mouse)74769437866704862Mouse
10412199Sst2_msusceptibility to tuberculosis 2 (mouse)Not determined718728794119485380Mouse
25314302Vmm2_mvariable multisystem mineralization 2, heart (mouse)74714974874149748Mouse
25314303Vmm4_mvariable multisystem mineralization 4, kidney (mouse)73729942587049208Mouse
25314301Vmm3_mvariable multisystem mineralization 3, lung (mouse)73729942572049748Mouse

Markers in Region
Slc17a6  
Mouse AssemblyChrPosition (strand)SourceJBrowse
MGSCv37758,924,616 - 58,924,689UniSTSGRCm37
Celera749,049,897 - 49,049,970UniSTS
Cytogenetic Map7B5UniSTS
cM Map7 UniSTS
D7Mit85  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38751,667,139 - 51,667,295UniSTSGRCm38
MGSCv37758,922,509 - 58,922,665UniSTSGRCm37
Celera749,047,781 - 49,047,942UniSTS
Cytogenetic Map7B5UniSTS
cM Map726.5UniSTS
Whitehead Genetic724.0UniSTS
Whitehead/MRC_RH7637.91UniSTS
Whitehead_YAC7 UniSTS
Slc17a6  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38751,669,246 - 51,669,319UniSTSGRCm38
MGSCv37758,924,616 - 58,924,689UniSTSGRCm37
Celera749,049,897 - 49,049,970UniSTS
Cytogenetic Map7B5UniSTS
cM Map7 UniSTS


Expression


Sequence


Ensembl Acc Id: ENSMUST00000032710   ⟹   ENSMUSP00000032710
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl751,271,754 - 51,320,867 (+)Ensembl
GRCm38.p6 Ensembl751,622,006 - 51,671,119 (+)Ensembl
Ensembl Acc Id: ENSMUST00000207375
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl751,274,896 - 51,295,969 (+)Ensembl
GRCm38.p6 Ensembl751,625,148 - 51,646,221 (+)Ensembl
Ensembl Acc Id: ENSMUST00000207945   ⟹   ENSMUSP00000146364
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl751,272,047 - 51,318,442 (+)Ensembl
GRCm38.p6 Ensembl751,622,299 - 51,668,694 (+)Ensembl
Ensembl Acc Id: ENSMUST00000208597
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl751,279,228 - 51,311,330 (+)Ensembl
GRCm38.p6 Ensembl751,629,480 - 51,661,582 (+)Ensembl
RefSeq Acc Id: NM_001355150   ⟹   NP_001342079
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39751,274,385 - 51,320,874 (+)NCBI
GRCm38751,624,637 - 51,671,126 (+)NCBI
Sequence:
RefSeq Acc Id: NM_080853   ⟹   NP_543129
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39751,271,578 - 51,320,874 (+)NCBI
GRCm38751,621,830 - 51,671,126 (+)ENTREZGENE
MGSCv37758,877,200 - 58,926,496 (+)RGD
Celera749,002,489 - 49,051,776 (+)RGD
cM Map7 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006540601   ⟹   XP_006540664
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39751,274,490 - 51,320,871 (+)NCBI
GRCm38751,624,737 - 51,671,123 (+)NCBI
Sequence:
RefSeq Acc Id: NP_543129   ⟸   NM_080853
- Peptide Label: isoform 1
- UniProtKB: Q920B7 (UniProtKB/Swiss-Prot),   Q8BLE7 (UniProtKB/Swiss-Prot),   A0A0R4J0A6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006540664   ⟸   XM_006540601
- Peptide Label: isoform X1
- UniProtKB: Q920B7 (UniProtKB/Swiss-Prot),   Q8BLE7 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001342079   ⟸   NM_001355150
- Peptide Label: isoform 2
- UniProtKB: Q920B7 (UniProtKB/Swiss-Prot),   Q8BLE7 (UniProtKB/Swiss-Prot)
Ensembl Acc Id: ENSMUSP00000032710   ⟸   ENSMUST00000032710
Ensembl Acc Id: ENSMUSP00000146364   ⟸   ENSMUST00000207945
Protein Domains
Major facilitator superfamily (MFS) profile

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8BLE7-F1-model_v2 AlphaFold Q8BLE7 1-582 view protein structure

Promoters
RGD ID:8664225
Promoter ID:EPDNEW_M10143
Type:initiation region
Name:Slc17a6_1
Description:Mus musculus solute carrier family 17 (sodium-dependent inorganicphosphate cotransporter), member 6 , transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M10144  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38751,621,886 - 51,621,946EPDNEW
RGD ID:8664227
Promoter ID:EPDNEW_M10144
Type:initiation region
Name:Slc17a6_2
Description:Mus musculus solute carrier family 17 (sodium-dependent inorganicphosphate cotransporter), member 6 , transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M10143  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38751,622,455 - 51,622,515EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2156052 AgrOrtholog
Ensembl Genes ENSMUSG00000030500 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000032710 ENTREZGENE
  ENSMUST00000032710.7 UniProtKB/TrEMBL
  ENSMUST00000207945.2 UniProtKB/TrEMBL
Gene3D-CATH 1.20.1250.20 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro MFS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MFS_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MFS_Na/Anion_cotransporter UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MFS_trans_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:140919 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:2156052 ENTREZGENE
NCBI Gene 140919 ENTREZGENE
PANTHER SOLUTE CARRIER FAMILY 17 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  VESICULAR GLUTAMATE TRANSPORTER 2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam MFS_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Slc17a6 PhenoGen
PROSITE MFS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF103473 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0R4J0A6 ENTREZGENE, UniProtKB/TrEMBL
  A0A140LHC9_MOUSE UniProtKB/TrEMBL
  Q8BLE7 ENTREZGENE
  Q920B7 ENTREZGENE
  VGLU2_MOUSE UniProtKB/Swiss-Prot
UniProt Secondary Q920B7 UniProtKB/Swiss-Prot